Homology
BLAST of CcUC06G111610 vs. NCBI nr
Match:
XP_038874865.1 (pentatricopeptide repeat-containing protein At1g05600 [Benincasa hispida])
HSP 1 Score: 944.5 bits (2440), Expect = 3.9e-271
Identity = 462/493 (93.71%), Postives = 480/493 (97.36%), Query Frame = 0
Query: 36 WPRFLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
WPR LTPTYLSQIIRKQNNPLTAYQLFKEAK RYPDYRHNGPVYAAMIDILGNSGR+SEM
Sbjct: 5 WPRILTPTYLSQIIRKQNNPLTAYQLFKEAKRRYPDYRHNGPVYAAMIDILGNSGRVSEM 64
Query: 96 REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
REV+DQMRDDSCECKDSVFSFAIKTYASHGLLEDGI+LFKSLG+FNCT+RTQTFNTLLEI
Sbjct: 65 REVIDQMRDDSCECKDSVFSFAIKTYASHGLLEDGITLFKSLGKFNCTNRTQTFNTLLEI 124
Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
LLN+SQLDAACQLFQ+ SYGW VKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP
Sbjct: 125 LLNESQLDAACQLFQESSYGWAVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 184
Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDTGEIEQA 275
+RLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCD G+IEQA
Sbjct: 185 SRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDNGDIEQA 244
Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIK LINEALIKGGIPSSDS+CAMA
Sbjct: 245 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKRLINEALIKGGIPSSDSFCAMA 304
Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPSSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
VDLYNENE DQGDKVVSHMVAKGFRPPSSI+EAK AALCKEGKVDDAVKVIEEEIVKGS
Sbjct: 305 VDLYNENETDQGDKVVSHMVAKGFRPPSSIFEAKVAALCKEGKVDDAVKVIEEEIVKGSC 364
Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVA+KGTYSTLVHGLCRENRY+EAC
Sbjct: 365 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVADKGTYSTLVHGLCRENRYIEAC 424
Query: 456 KVLEEMVIKSFSPCNNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
KVLEEMVIKSF PC+NTFNTLIRGLCSVGK YEAVMWLEEMISQGQLPHVSVWNSLVSSL
Sbjct: 425 KVLEEMVIKSFWPCSNTFNTLIRGLCSVGKQYEAVMWLEEMISQGQLPHVSVWNSLVSSL 484
Query: 516 CCNLTGTAIWSKV 529
CC++ GT +WS+V
Sbjct: 485 CCDVAGTNMWSEV 497
BLAST of CcUC06G111610 vs. NCBI nr
Match:
XP_016902498.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cucumis melo] >XP_016902499.1 PREDICTED: pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cucumis melo] >KAA0039806.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK24691.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 928.7 bits (2399), Expect = 2.2e-266
Identity = 455/494 (92.11%), Postives = 476/494 (96.36%), Query Frame = 0
Query: 36 WPRFLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
WPR LTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMI+ILGNSGR+SEM
Sbjct: 5 WPRILTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMINILGNSGRVSEM 64
Query: 96 REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCT+RTQTFNTLLEI
Sbjct: 65 REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTNRTQTFNTLLEI 124
Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
LLN+SQL AACQLFQ+CSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP
Sbjct: 125 LLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 184
Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDTGEIEQA 275
NRLSYLI+MKGLCQDGRLNEAIHLLYSMFWRIS++G GGDIVIYRTLLFALCD GEIEQA
Sbjct: 185 NRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGEIEQA 244
Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
VEILGKILRKGLKAPKRAHYRIDLDQCRN+KLTI EIKSLINEALIKGGIPSSDSYCAMA
Sbjct: 245 VEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALIKGGIPSSDSYCAMA 304
Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPSSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
VDLYNEN+ DQGDKVVSHM+AKGFRPPSSIYEAK A+LCKEGKVDDAVKVIEE+IV GS
Sbjct: 305 VDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDDAVKVIEEQIV-GSC 364
Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
VPT+ALYNIVLKGLCD+GKSTVAMEYLKKMAK+VGLVANK TYSTLVHGLCRENRY EAC
Sbjct: 365 VPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLVHGLCRENRYTEAC 424
Query: 456 KVLEEMVIKSFSPCNNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
KVLEEMVIKSF PC+NTFNTLI+GLCSVGK YEAVMWLEEMISQGQLPHV VWNSLVSSL
Sbjct: 425 KVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQLPHVCVWNSLVSSL 484
Query: 516 CCNLTGTAIWSKVL 530
CC++ G + SKVL
Sbjct: 485 CCDVAGIDMCSKVL 497
BLAST of CcUC06G111610 vs. NCBI nr
Match:
XP_004140638.1 (pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cucumis sativus] >KGN46470.1 hypothetical protein Csa_005325 [Cucumis sativus])
HSP 1 Score: 916.8 bits (2368), Expect = 8.8e-263
Identity = 449/494 (90.89%), Postives = 470/494 (95.14%), Query Frame = 0
Query: 36 WPRFLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
WPR LTPT LSQIIRKQNNP TAYQLFKEAKCRYPDYRHNGPVYA MI+ILGNSGR+SEM
Sbjct: 5 WPRILTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMINILGNSGRVSEM 64
Query: 96 REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKS GRFNCT+RTQTFNTLLEI
Sbjct: 65 REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFNCTNRTQTFNTLLEI 124
Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
LL +SQL AACQLFQ+CSYGW VKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP
Sbjct: 125 LLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 184
Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDTGEIEQA 275
NRLSYLI+MKGLCQDGRLNEAIHLLYSMFWRIS++GGGGDIVIYRTLLFALCD GEIEQA
Sbjct: 185 NRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGEIEQA 244
Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
VEILGKILRKGLKAPKRAHYRIDLDQCRNS LTI EIKSLINEALIKGGIPSSDSYCAMA
Sbjct: 245 VEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALIKGGIPSSDSYCAMA 304
Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPSSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
VDLYNEN+ DQGDKVVSHM+AKGFRPPS IYEAKAA+LCKEGKVDDAVKVIEE+IV G
Sbjct: 305 VDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVIEEQIV-GGC 364
Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
VPT+ALYNIVLKGLCD+GKSTVAMEYLKKMAKQVGLVANK TYSTLVHGLC ENRY+EAC
Sbjct: 365 VPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYIEAC 424
Query: 456 KVLEEMVIKSFSPCNNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
KVLEEMVIKSF PC+NTFNTLI+GLCSVGKHYEAVMWLEEMISQGQLPHV VWNSLVSSL
Sbjct: 425 KVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSLVSSL 484
Query: 516 CCNLTGTAIWSKVL 530
CC++ G + S+VL
Sbjct: 485 CCDVAGIDMCSRVL 497
BLAST of CcUC06G111610 vs. NCBI nr
Match:
XP_023004266.1 (pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima] >XP_023004267.1 pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima] >XP_023004268.1 pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima] >XP_023004269.1 pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima] >XP_023004270.1 pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima])
HSP 1 Score: 880.6 bits (2274), Expect = 7.0e-252
Identity = 432/494 (87.45%), Postives = 464/494 (93.93%), Query Frame = 0
Query: 36 WPRFLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
WPR LTPT+LSQIIRKQNNP TAYQLF EAKCRYP+Y+HNGPVYAAMI+ILGNSGRISEM
Sbjct: 5 WPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGRISEM 64
Query: 96 REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
REV+DQM+ DSC+CKDS+FSFAIKTYASHGLLE+GISLFKSLG FNCTDRTQTFNTLLEI
Sbjct: 65 REVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNTLLEI 124
Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
LLN+SQLDAACQLFQQ S+GWEVKSRTQSLNLLMQSLCQRGQSELALHVF+EMDYQSCYP
Sbjct: 125 LLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQSCYP 184
Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDTGEIEQA 275
NRLSYLILMKGLCQDG+L+EAIHLLYSMFWRIS++G GGDIVIYRTLLFALCD GEIEQA
Sbjct: 185 NRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGEIEQA 244
Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
VEILGKIL+KGLK+PKRAHY IDL+ CR SKLT+ EIK LINEALIKGGIPSSDSYCAMA
Sbjct: 245 VEILGKILKKGLKSPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSYCAMA 304
Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPSSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
+DLYNENE DQGDKVVSHM+AKGF PPSS+YEAKAAALCKEGKVDDAVKVIEEE VKGS
Sbjct: 305 IDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETVKGSC 364
Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
VPTVALYNIVL GLC GKSTVAME+LKKMAKQVGLVA+K TYSTLVHGLCRENRY EAC
Sbjct: 365 VPTVALYNIVLNGLCRAGKSTVAMEFLKKMAKQVGLVADKETYSTLVHGLCRENRYTEAC 424
Query: 456 KVLEEMVIKSFSPCNNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
K+LEEMVIKS PC+NTFNTLIRGLCSVGK Y+AVM LEEMISQGQLP +SVWN+LVSSL
Sbjct: 425 KLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNALVSSL 484
Query: 516 CCNLTGTAIWSKVL 530
C N+ GT +WSKVL
Sbjct: 485 CFNVAGTFMWSKVL 498
BLAST of CcUC06G111610 vs. NCBI nr
Match:
KAG6592948.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 878.2 bits (2268), Expect = 3.5e-251
Identity = 432/494 (87.45%), Postives = 462/494 (93.52%), Query Frame = 0
Query: 36 WPRFLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
WPR LTPT+LSQIIRKQNNP TAYQLF EAKCRYP+Y+HNGPVYAAMI+ILGNSGRISEM
Sbjct: 5 WPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGRISEM 64
Query: 96 REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
REV+DQM+ DSC+CKDS+FSFAIKTYASHGLLE+GISLFKSLG FNCTDRTQTFNTLLEI
Sbjct: 65 REVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNTLLEI 124
Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
LLN+SQLDAACQLFQQ S+GWEVKSRTQSLNLLMQSLCQRGQSELALHVF+EMDYQSCYP
Sbjct: 125 LLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQSCYP 184
Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDTGEIEQA 275
NRLSYLILMKGLCQDG+L+EAIHLLYSMFWRIS+RG GGDIVIYRTLLFALCD GEIEQA
Sbjct: 185 NRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGEIEQA 244
Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
VEILGKIL+KGLKAPKRAHY IDL+ CR SKLT+ EIK LINEALIKGGIPSSDSYCAMA
Sbjct: 245 VEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSYCAMA 304
Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPSSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
+DLYNENE DQGDKVVSHM+AKGF PPSS+YEAKAAALCKEGKVDDAVKVIEEE VKGS
Sbjct: 305 IDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETVKGSC 364
Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
VPTVALYNIVL GLC GKSTVAME+LKKM KQVGLVA+K TYSTLVHGLCRENRY EAC
Sbjct: 365 VPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRYTEAC 424
Query: 456 KVLEEMVIKSFSPCNNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
K+LEEMVIKS PC+NTFNTLIRGLCSVGK Y+AVM LEEMISQGQLP +SVWN+LVSSL
Sbjct: 425 KLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNALVSSL 484
Query: 516 CCNLTGTAIWSKVL 530
C N+ T +WSKVL
Sbjct: 485 CFNVADTDMWSKVL 498
BLAST of CcUC06G111610 vs. ExPASy Swiss-Prot
Match:
Q9SYK1 (Pentatricopeptide repeat-containing protein At1g05600 OS=Arabidopsis thaliana OX=3702 GN=At1g05600 PE=2 SV=1)
HSP 1 Score: 574.3 bits (1479), Expect = 1.4e-162
Identity = 273/481 (56.76%), Postives = 365/481 (75.88%), Query Frame = 0
Query: 36 WPRFLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
WPR LTP+ LSQI++KQ NP+TA +LF+EAK R+P Y HNG VYA MIDILG S R+ EM
Sbjct: 6 WPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEM 65
Query: 96 REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
+ V+++M++DSCECKDSVF+ I+T++ G LED ISLFKSL FNC + + +F+TLL+
Sbjct: 66 KYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQE 125
Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
++ +S+L+AAC +F++ YGWEV SR +LNLLM+ LCQ +S+LA VFQEM+YQ CYP
Sbjct: 126 MVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYP 185
Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDTGEIEQA 275
+R SY ILMKG C +G+L EA HLLYSMFWRISQ+G G DIV+YR LL ALCD GE++ A
Sbjct: 186 DRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDA 245
Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
+EILGKILRKGLKAPKR ++ I+ +S I +K L+ E LI+G IP DSY AMA
Sbjct: 246 IEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMA 305
Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPSSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
DL+ E ++ +G++V+ M +KGF P IY AK ALC+ GK+ +AV VI +E+++G
Sbjct: 306 TDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHC 365
Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
+PTV +YN+++KGLCD+GKS A+ YLKKM+KQV VAN+ TY TLV GLCR+ +++EA
Sbjct: 366 LPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEAS 425
Query: 456 KVLEEMVIKSFSPCNNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
+V+EEM+IKS P T++ +I+GLC + + YEAVMWLEEM+SQ +P SVW +L S+
Sbjct: 426 QVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485
Query: 516 C 517
C
Sbjct: 486 C 486
BLAST of CcUC06G111610 vs. ExPASy Swiss-Prot
Match:
Q9CA58 (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1)
HSP 1 Score: 180.6 bits (457), Expect = 4.5e-44
Identity = 125/515 (24.27%), Postives = 239/515 (46.41%), Query Frame = 0
Query: 40 LTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEMREVM 99
L P +++ +I+ Q +P+ A ++F + + ++H Y ++I+ LG G+ M EV+
Sbjct: 5 LLPKHVTAVIKCQKDPMKALEMFNSMR-KEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVL 64
Query: 100 DQMRDD-SCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEILLN 159
MR++ + V+ A+K Y G +++ +++F+ + ++C ++N ++ +L++
Sbjct: 65 VDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD 124
Query: 160 QSQLDAACQLFQQCSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYPNRL 219
D A +++ + + S + M+S C+ + AL + M Q C N +
Sbjct: 125 SGYFDQAHKVYMRMR-DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVV 184
Query: 220 SYLILMKG-----------------------------------LCQDGRLNEAIHLLYSM 279
+Y ++ G LC+ G + E LL
Sbjct: 185 AYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLD-- 244
Query: 280 FWRISQRGGGGDIVIYRTLLFALCDTGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCR 339
++ +RG ++ Y + LC GE++ AV ++G ++ +G K + + C+
Sbjct: 245 --KVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCK 304
Query: 340 NSKLTIGEI--KSLINEALIKGGIPSSDSYCAMAVDLYNENEIDQGDKVVSHMVAKGFRP 399
NSK E+ ++NE L P S +Y + + +++V V GF P
Sbjct: 305 NSKFQEAEVYLGKMVNEGL----EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVP 364
Query: 400 PSSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSGVPTVALYNIVLKGLCDEGKSTVAMEY 459
Y + LC EG+ + A+ + E + KG P V LYN ++KGL ++G A +
Sbjct: 365 DQFTYRSLIDGLCHEGETNRALALFNEALGKGI-KPNVILYNTLIKGLSNQGMILEAAQL 424
Query: 460 LKKMAKQVGLVANKGTYSTLVHGLCRENRYVEACKVLEEMVIKSFSPCNNTFNTLIRGLC 517
+M+++ GL+ T++ LV+GLC+ +A +++ M+ K + P TFN LI G
Sbjct: 425 ANEMSEK-GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS 484
BLAST of CcUC06G111610 vs. ExPASy Swiss-Prot
Match:
Q9FFE3 (Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g16420 PE=2 SV=1)
HSP 1 Score: 179.9 bits (455), Expect = 7.7e-44
Identity = 120/492 (24.39%), Postives = 228/492 (46.34%), Query Frame = 0
Query: 14 YEITSSSAEVDFEVGQKIPLRWWPRFLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYR 73
+ ++S+A + +K P++ WP+ L P L +I +Q N A Q+F A +P +
Sbjct: 21 FSASASAASLQQYCTEKPPIKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFT 80
Query: 74 HNGPVYAAMIDILGNSGRISEMREVMDQMRDD--SCECKDSVFSFAIKTYASHGLLEDGI 133
HN Y +++ L + + +M +R+ +C +++F ++ Y G E +
Sbjct: 81 HNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSM 140
Query: 134 SLFKSLGRFNCTDRTQTFNTLLEILLNQSQLDAACQLFQQCSYGWEVKSRTQSLNLLMQS 193
+F + F ++ NTLL +L+ + D +F+ + + + NLL+++
Sbjct: 141 RIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKA 200
Query: 194 LCQRGQSELALHVFQEMDYQSCYPNRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRG 253
LC++ E A V E+ PN ++Y ++ G G + A +L M RG
Sbjct: 201 LCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEML----DRG 260
Query: 254 GGGDIVIYRTLLFALCDTGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQ-CRNSKLTIG 313
D Y L+ C G +A ++ + + ++ P Y + + C+ K G
Sbjct: 261 WYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIE-PNEVTYGVMIRALCKEKK--SG 320
Query: 314 EIKSLINEALIKGGIPSSDSYCAMAVDLYNENEIDQGDKVVSHMVAKGFRPPSSIYEAKA 373
E +++ +E L + +P S C + L ++++D+ + M+ P +++
Sbjct: 321 EARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLI 380
Query: 374 AALCKEGKVDDAVKVIEEEIVKGSGVPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVG 433
LCKEG+V +A K+ +E KGS +P++ YN ++ G+C++G+ T A M ++
Sbjct: 381 HWLCKEGRVTEARKLF-DEFEKGS-IPSLLTYNTLIAGMCEKGELTEAGRLWDDMYER-K 440
Query: 434 LVANKGTYSTLVHGLCRENRYVEACKVLEEMVIKSFSPCNNTFNTLIRGLCSVGKHYEAV 493
N TY+ L+ GL + E +VLEEM+ P TF L GL +GK +A+
Sbjct: 441 CKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAM 500
Query: 494 MWLEEMISQGQL 503
+ + G++
Sbjct: 501 KIVSMAVMNGKV 502
BLAST of CcUC06G111610 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 177.6 bits (449), Expect = 3.8e-43
Identity = 123/515 (23.88%), Postives = 242/515 (46.99%), Query Frame = 0
Query: 41 TPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEMREVMD 100
T L +R Q + A +LF A + P++ +Y ++ LG SG +M+++++
Sbjct: 49 TDVKLLDSLRSQPDDSAALRLFNLAS-KKPNFSPEPALYEEILLRLGRSGSFDDMKKILE 108
Query: 101 QMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFK-SLGRFNCTDRTQTFNTLLEILLNQ 160
M+ CE S F I++YA L ++ +S+ + F T +N +L +L++
Sbjct: 109 DMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDG 168
Query: 161 SQLDAACQLFQQCSYGWEVKSRTQSLNLLMQSLC-------------------------- 220
+ L ++ W +K + N+L+++LC
Sbjct: 169 NSLKLV-EISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 228
Query: 221 ---------QRGQSELALHVFQEMDYQSCYPNRLSYLILMKGLCQDGRLNEAIHLLYSMF 280
+ G + AL + ++M C + +S +++ G C++GR+ +A++ + M
Sbjct: 229 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM- 288
Query: 281 WRISQRGGGGDIVIYRTLLFALCDTGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRN 340
+Q G D + TL+ LC G ++ A+EI+ +L++G + + C+
Sbjct: 289 --SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK- 348
Query: 341 SKLTIGEIK---SLINEALIKGGIPSSDSYCAMAVDLYNENEIDQGDKVVSHMVAKGFRP 400
+GE+K ++++ + + P++ +Y + L EN++++ ++ + +KG P
Sbjct: 349 ----LGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 408
Query: 401 PSSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSGVPTVALYNIVLKGLCDEGKSTVAMEY 460
+ + LC A+++ EE KG P YN+++ LC +GK A+
Sbjct: 409 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC-EPDEFTYNMLIDSLCSKGKLDEALNM 468
Query: 461 LKKMAKQVGLVANKGTYSTLVHGLCRENRYVEACKVLEEMVIKSFSPCNNTFNTLIRGLC 517
LK+M + G + TY+TL+ G C+ N+ EA ++ +EM + S + T+NTLI GLC
Sbjct: 469 LKQM-ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 528
BLAST of CcUC06G111610 vs. ExPASy Swiss-Prot
Match:
O49436 (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX=3702 GN=EMB1025 PE=3 SV=1)
HSP 1 Score: 176.8 bits (447), Expect = 6.5e-43
Identity = 120/470 (25.53%), Postives = 223/470 (47.45%), Query Frame = 0
Query: 54 NPLTA---YQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEMREVMDQMRDDSCECK 113
NPL A ++FK A + ++ ++MI+ NSG + +++ ++R ++
Sbjct: 53 NPLEAPISEKMFKSAP-KMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVII 112
Query: 114 DSVFSFAIKTYASHGLLEDGISLF-KSLGRFNCTDRTQTFNTLLEILLNQSQLDAACQLF 173
+ F + Y L + + LF + + F C ++FN++L +++N+ + +
Sbjct: 113 ERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFY 172
Query: 174 Q---QCSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYPNRLSYLILMKG 233
+ + S NL++++LC+ + A+ VF+ M + C P+ +Y LM G
Sbjct: 173 DYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDG 232
Query: 234 LCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDTGEIEQAVEILGKILRKG 293
LC++ R++EA+ LL M G VIY L+ LC G++ + +++ + KG
Sbjct: 233 LCKEERIDEAVLLLDEM----QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG 292
Query: 294 LKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMAVDLYNENEIDQ 353
+ + + C KL + SL+ + IP+ +Y + L +
Sbjct: 293 CVPNEVTYNTLIHGLCLKGKL--DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATD 352
Query: 354 GDKVVSHMVAKGFRPPSSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSGVPTVALYNIVL 413
+++S M +G+ IY + L KEGK ++A+ + + KG P + +Y++++
Sbjct: 353 AVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGC-KPNIVVYSVLV 412
Query: 414 KGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEACKVLEEMVIKSF 473
GLC EGK A E L +M G + N TYS+L+ G + EA +V +EM
Sbjct: 413 DGLCREGKPNEAKEILNRMIAS-GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 472
Query: 474 SPCNNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSLC 517
S ++ LI GLC VG+ EA+M +M++ G P ++S++ LC
Sbjct: 473 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLC 513
BLAST of CcUC06G111610 vs. ExPASy TrEMBL
Match:
A0A1S4E2N8 (pentatricopeptide repeat-containing protein At1g05600 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498838 PE=4 SV=1)
HSP 1 Score: 928.7 bits (2399), Expect = 1.1e-266
Identity = 455/494 (92.11%), Postives = 476/494 (96.36%), Query Frame = 0
Query: 36 WPRFLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
WPR LTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMI+ILGNSGR+SEM
Sbjct: 5 WPRILTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMINILGNSGRVSEM 64
Query: 96 REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCT+RTQTFNTLLEI
Sbjct: 65 REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTNRTQTFNTLLEI 124
Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
LLN+SQL AACQLFQ+CSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP
Sbjct: 125 LLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 184
Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDTGEIEQA 275
NRLSYLI+MKGLCQDGRLNEAIHLLYSMFWRIS++G GGDIVIYRTLLFALCD GEIEQA
Sbjct: 185 NRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGEIEQA 244
Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
VEILGKILRKGLKAPKRAHYRIDLDQCRN+KLTI EIKSLINEALIKGGIPSSDSYCAMA
Sbjct: 245 VEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALIKGGIPSSDSYCAMA 304
Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPSSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
VDLYNEN+ DQGDKVVSHM+AKGFRPPSSIYEAK A+LCKEGKVDDAVKVIEE+IV GS
Sbjct: 305 VDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDDAVKVIEEQIV-GSC 364
Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
VPT+ALYNIVLKGLCD+GKSTVAMEYLKKMAK+VGLVANK TYSTLVHGLCRENRY EAC
Sbjct: 365 VPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLVHGLCRENRYTEAC 424
Query: 456 KVLEEMVIKSFSPCNNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
KVLEEMVIKSF PC+NTFNTLI+GLCSVGK YEAVMWLEEMISQGQLPHV VWNSLVSSL
Sbjct: 425 KVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQLPHVCVWNSLVSSL 484
Query: 516 CCNLTGTAIWSKVL 530
CC++ G + SKVL
Sbjct: 485 CCDVAGIDMCSKVL 497
BLAST of CcUC06G111610 vs. ExPASy TrEMBL
Match:
A0A5D3DM62 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002440 PE=4 SV=1)
HSP 1 Score: 928.7 bits (2399), Expect = 1.1e-266
Identity = 455/494 (92.11%), Postives = 476/494 (96.36%), Query Frame = 0
Query: 36 WPRFLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
WPR LTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMI+ILGNSGR+SEM
Sbjct: 5 WPRILTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMINILGNSGRVSEM 64
Query: 96 REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCT+RTQTFNTLLEI
Sbjct: 65 REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTNRTQTFNTLLEI 124
Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
LLN+SQL AACQLFQ+CSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP
Sbjct: 125 LLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 184
Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDTGEIEQA 275
NRLSYLI+MKGLCQDGRLNEAIHLLYSMFWRIS++G GGDIVIYRTLLFALCD GEIEQA
Sbjct: 185 NRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGEIEQA 244
Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
VEILGKILRKGLKAPKRAHYRIDLDQCRN+KLTI EIKSLINEALIKGGIPSSDSYCAMA
Sbjct: 245 VEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALIKGGIPSSDSYCAMA 304
Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPSSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
VDLYNEN+ DQGDKVVSHM+AKGFRPPSSIYEAK A+LCKEGKVDDAVKVIEE+IV GS
Sbjct: 305 VDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDDAVKVIEEQIV-GSC 364
Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
VPT+ALYNIVLKGLCD+GKSTVAMEYLKKMAK+VGLVANK TYSTLVHGLCRENRY EAC
Sbjct: 365 VPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLVHGLCRENRYTEAC 424
Query: 456 KVLEEMVIKSFSPCNNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
KVLEEMVIKSF PC+NTFNTLI+GLCSVGK YEAVMWLEEMISQGQLPHV VWNSLVSSL
Sbjct: 425 KVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQLPHVCVWNSLVSSL 484
Query: 516 CCNLTGTAIWSKVL 530
CC++ G + SKVL
Sbjct: 485 CCDVAGIDMCSKVL 497
BLAST of CcUC06G111610 vs. ExPASy TrEMBL
Match:
A0A0A0K9Q4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095860 PE=4 SV=1)
HSP 1 Score: 916.8 bits (2368), Expect = 4.2e-263
Identity = 449/494 (90.89%), Postives = 470/494 (95.14%), Query Frame = 0
Query: 36 WPRFLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
WPR LTPT LSQIIRKQNNP TAYQLFKEAKCRYPDYRHNGPVYA MI+ILGNSGR+SEM
Sbjct: 5 WPRILTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMINILGNSGRVSEM 64
Query: 96 REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKS GRFNCT+RTQTFNTLLEI
Sbjct: 65 REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFNCTNRTQTFNTLLEI 124
Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
LL +SQL AACQLFQ+CSYGW VKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP
Sbjct: 125 LLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 184
Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDTGEIEQA 275
NRLSYLI+MKGLCQDGRLNEAIHLLYSMFWRIS++GGGGDIVIYRTLLFALCD GEIEQA
Sbjct: 185 NRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGEIEQA 244
Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
VEILGKILRKGLKAPKRAHYRIDLDQCRNS LTI EIKSLINEALIKGGIPSSDSYCAMA
Sbjct: 245 VEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALIKGGIPSSDSYCAMA 304
Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPSSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
VDLYNEN+ DQGDKVVSHM+AKGFRPPS IYEAKAA+LCKEGKVDDAVKVIEE+IV G
Sbjct: 305 VDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVIEEQIV-GGC 364
Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
VPT+ALYNIVLKGLCD+GKSTVAMEYLKKMAKQVGLVANK TYSTLVHGLC ENRY+EAC
Sbjct: 365 VPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYIEAC 424
Query: 456 KVLEEMVIKSFSPCNNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
KVLEEMVIKSF PC+NTFNTLI+GLCSVGKHYEAVMWLEEMISQGQLPHV VWNSLVSSL
Sbjct: 425 KVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSLVSSL 484
Query: 516 CCNLTGTAIWSKVL 530
CC++ G + S+VL
Sbjct: 485 CCDVAGIDMCSRVL 497
BLAST of CcUC06G111610 vs. ExPASy TrEMBL
Match:
A0A6J1KU44 (pentatricopeptide repeat-containing protein At1g05600 OS=Cucurbita maxima OX=3661 GN=LOC111497651 PE=4 SV=1)
HSP 1 Score: 880.6 bits (2274), Expect = 3.4e-252
Identity = 432/494 (87.45%), Postives = 464/494 (93.93%), Query Frame = 0
Query: 36 WPRFLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
WPR LTPT+LSQIIRKQNNP TAYQLF EAKCRYP+Y+HNGPVYAAMI+ILGNSGRISEM
Sbjct: 5 WPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGRISEM 64
Query: 96 REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
REV+DQM+ DSC+CKDS+FSFAIKTYASHGLLE+GISLFKSLG FNCTDRTQTFNTLLEI
Sbjct: 65 REVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNTLLEI 124
Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
LLN+SQLDAACQLFQQ S+GWEVKSRTQSLNLLMQSLCQRGQSELALHVF+EMDYQSCYP
Sbjct: 125 LLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQSCYP 184
Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDTGEIEQA 275
NRLSYLILMKGLCQDG+L+EAIHLLYSMFWRIS++G GGDIVIYRTLLFALCD GEIEQA
Sbjct: 185 NRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGEIEQA 244
Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
VEILGKIL+KGLK+PKRAHY IDL+ CR SKLT+ EIK LINEALIKGGIPSSDSYCAMA
Sbjct: 245 VEILGKILKKGLKSPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSYCAMA 304
Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPSSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
+DLYNENE DQGDKVVSHM+AKGF PPSS+YEAKAAALCKEGKVDDAVKVIEEE VKGS
Sbjct: 305 IDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETVKGSC 364
Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
VPTVALYNIVL GLC GKSTVAME+LKKMAKQVGLVA+K TYSTLVHGLCRENRY EAC
Sbjct: 365 VPTVALYNIVLNGLCRAGKSTVAMEFLKKMAKQVGLVADKETYSTLVHGLCRENRYTEAC 424
Query: 456 KVLEEMVIKSFSPCNNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
K+LEEMVIKS PC+NTFNTLIRGLCSVGK Y+AVM LEEMISQGQLP +SVWN+LVSSL
Sbjct: 425 KLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNALVSSL 484
Query: 516 CCNLTGTAIWSKVL 530
C N+ GT +WSKVL
Sbjct: 485 CFNVAGTFMWSKVL 498
BLAST of CcUC06G111610 vs. ExPASy TrEMBL
Match:
A0A6J1DVG7 (pentatricopeptide repeat-containing protein At1g05600 OS=Momordica charantia OX=3673 GN=LOC111024421 PE=4 SV=1)
HSP 1 Score: 877.9 bits (2267), Expect = 2.2e-251
Identity = 424/491 (86.35%), Postives = 459/491 (93.48%), Query Frame = 0
Query: 36 WPRFLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
WPR LTPT+LSQIIRKQNNP TA+QLFKEAKCRYP YRHNGPVYAAMIDILGNSGR+ EM
Sbjct: 5 WPRMLTPTHLSQIIRKQNNPFTAFQLFKEAKCRYPGYRHNGPVYAAMIDILGNSGRVVEM 64
Query: 96 REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
REV+DQM+DDSCECKDSVFSFAIKTYASHGLLE+GISLFKSLGRFNCT+RTQTFNTLLEI
Sbjct: 65 REVIDQMKDDSCECKDSVFSFAIKTYASHGLLEEGISLFKSLGRFNCTNRTQTFNTLLEI 124
Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
LLN+S+LDAACQLFQQ SYGW VKSRTQSLNLLMQSLCQR QSELALH+FQEMDYQ CYP
Sbjct: 125 LLNESRLDAACQLFQQSSYGWGVKSRTQSLNLLMQSLCQRAQSELALHIFQEMDYQGCYP 184
Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDTGEIEQA 275
NRLSYLILMKGLCQDGRLNEA+HLLYSMFWRISQRG GGDIVIYRTLL+ALC GE+EQA
Sbjct: 185 NRLSYLILMKGLCQDGRLNEAVHLLYSMFWRISQRGSGGDIVIYRTLLYALCANGEVEQA 244
Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
VEILGKILRKGLKAPKR HYRIDLDQC+NSKLTI EIK L NEALIKGGIPS +YCAMA
Sbjct: 245 VEILGKILRKGLKAPKRVHYRIDLDQCKNSKLTIDEIKRLFNEALIKGGIPSLATYCAMA 304
Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPSSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
VDLYNEN DQGDKVVSHM+AKGFRPPSSIYEAKAAALCKEGKVDDA++VI+EE VKGS
Sbjct: 305 VDLYNENVTDQGDKVVSHMLAKGFRPPSSIYEAKAAALCKEGKVDDAMRVIDEETVKGSC 364
Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
+P+VALYNIVLKGL +EGKSTVA+EYLKKMAKQVGLVA+K TYS LVHGLC ENRY+EAC
Sbjct: 365 IPSVALYNIVLKGLSNEGKSTVALEYLKKMAKQVGLVADKETYSILVHGLCAENRYIEAC 424
Query: 456 KVLEEMVIKSFSPCNNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
K+LEEMVIKS+ PC++TFNTLI GLCS+GK YEAVMWLEEMISQGQLP +SVWNSLVSS+
Sbjct: 425 KMLEEMVIKSYRPCSDTFNTLIGGLCSIGKQYEAVMWLEEMISQGQLPELSVWNSLVSSV 484
Query: 516 CCNLTGTAIWS 527
C N+ GT +W+
Sbjct: 485 CFNVAGTDVWT 495
BLAST of CcUC06G111610 vs. TAIR 10
Match:
AT1G05600.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 574.3 bits (1479), Expect = 9.9e-164
Identity = 273/481 (56.76%), Postives = 365/481 (75.88%), Query Frame = 0
Query: 36 WPRFLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
WPR LTP+ LSQI++KQ NP+TA +LF+EAK R+P Y HNG VYA MIDILG S R+ EM
Sbjct: 6 WPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEM 65
Query: 96 REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
+ V+++M++DSCECKDSVF+ I+T++ G LED ISLFKSL FNC + + +F+TLL+
Sbjct: 66 KYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQE 125
Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
++ +S+L+AAC +F++ YGWEV SR +LNLLM+ LCQ +S+LA VFQEM+YQ CYP
Sbjct: 126 MVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYP 185
Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDTGEIEQA 275
+R SY ILMKG C +G+L EA HLLYSMFWRISQ+G G DIV+YR LL ALCD GE++ A
Sbjct: 186 DRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDA 245
Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
+EILGKILRKGLKAPKR ++ I+ +S I +K L+ E LI+G IP DSY AMA
Sbjct: 246 IEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMA 305
Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPSSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
DL+ E ++ +G++V+ M +KGF P IY AK ALC+ GK+ +AV VI +E+++G
Sbjct: 306 TDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHC 365
Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
+PTV +YN+++KGLCD+GKS A+ YLKKM+KQV VAN+ TY TLV GLCR+ +++EA
Sbjct: 366 LPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEAS 425
Query: 456 KVLEEMVIKSFSPCNNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
+V+EEM+IKS P T++ +I+GLC + + YEAVMWLEEM+SQ +P SVW +L S+
Sbjct: 426 QVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485
Query: 516 C 517
C
Sbjct: 486 C 486
BLAST of CcUC06G111610 vs. TAIR 10
Match:
AT1G05600.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 574.3 bits (1479), Expect = 9.9e-164
Identity = 273/481 (56.76%), Postives = 365/481 (75.88%), Query Frame = 0
Query: 36 WPRFLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
WPR LTP+ LSQI++KQ NP+TA +LF+EAK R+P Y HNG VYA MIDILG S R+ EM
Sbjct: 6 WPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEM 65
Query: 96 REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
+ V+++M++DSCECKDSVF+ I+T++ G LED ISLFKSL FNC + + +F+TLL+
Sbjct: 66 KYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQE 125
Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
++ +S+L+AAC +F++ YGWEV SR +LNLLM+ LCQ +S+LA VFQEM+YQ CYP
Sbjct: 126 MVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYP 185
Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDTGEIEQA 275
+R SY ILMKG C +G+L EA HLLYSMFWRISQ+G G DIV+YR LL ALCD GE++ A
Sbjct: 186 DRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDA 245
Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
+EILGKILRKGLKAPKR ++ I+ +S I +K L+ E LI+G IP DSY AMA
Sbjct: 246 IEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMA 305
Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPSSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
DL+ E ++ +G++V+ M +KGF P IY AK ALC+ GK+ +AV VI +E+++G
Sbjct: 306 TDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHC 365
Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
+PTV +YN+++KGLCD+GKS A+ YLKKM+KQV VAN+ TY TLV GLCR+ +++EA
Sbjct: 366 LPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEAS 425
Query: 456 KVLEEMVIKSFSPCNNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
+V+EEM+IKS P T++ +I+GLC + + YEAVMWLEEM+SQ +P SVW +L S+
Sbjct: 426 QVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485
Query: 516 C 517
C
Sbjct: 486 C 486
BLAST of CcUC06G111610 vs. TAIR 10
Match:
AT1G74580.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 180.6 bits (457), Expect = 3.2e-45
Identity = 125/515 (24.27%), Postives = 239/515 (46.41%), Query Frame = 0
Query: 40 LTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEMREVM 99
L P +++ +I+ Q +P+ A ++F + + ++H Y ++I+ LG G+ M EV+
Sbjct: 5 LLPKHVTAVIKCQKDPMKALEMFNSMR-KEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVL 64
Query: 100 DQMRDD-SCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEILLN 159
MR++ + V+ A+K Y G +++ +++F+ + ++C ++N ++ +L++
Sbjct: 65 VDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD 124
Query: 160 QSQLDAACQLFQQCSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYPNRL 219
D A +++ + + S + M+S C+ + AL + M Q C N +
Sbjct: 125 SGYFDQAHKVYMRMR-DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVV 184
Query: 220 SYLILMKG-----------------------------------LCQDGRLNEAIHLLYSM 279
+Y ++ G LC+ G + E LL
Sbjct: 185 AYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLD-- 244
Query: 280 FWRISQRGGGGDIVIYRTLLFALCDTGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCR 339
++ +RG ++ Y + LC GE++ AV ++G ++ +G K + + C+
Sbjct: 245 --KVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCK 304
Query: 340 NSKLTIGEI--KSLINEALIKGGIPSSDSYCAMAVDLYNENEIDQGDKVVSHMVAKGFRP 399
NSK E+ ++NE L P S +Y + + +++V V GF P
Sbjct: 305 NSKFQEAEVYLGKMVNEGL----EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVP 364
Query: 400 PSSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSGVPTVALYNIVLKGLCDEGKSTVAMEY 459
Y + LC EG+ + A+ + E + KG P V LYN ++KGL ++G A +
Sbjct: 365 DQFTYRSLIDGLCHEGETNRALALFNEALGKGI-KPNVILYNTLIKGLSNQGMILEAAQL 424
Query: 460 LKKMAKQVGLVANKGTYSTLVHGLCRENRYVEACKVLEEMVIKSFSPCNNTFNTLIRGLC 517
+M+++ GL+ T++ LV+GLC+ +A +++ M+ K + P TFN LI G
Sbjct: 425 ANEMSEK-GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS 484
BLAST of CcUC06G111610 vs. TAIR 10
Match:
AT5G16420.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 179.9 bits (455), Expect = 5.5e-45
Identity = 120/492 (24.39%), Postives = 228/492 (46.34%), Query Frame = 0
Query: 14 YEITSSSAEVDFEVGQKIPLRWWPRFLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYR 73
+ ++S+A + +K P++ WP+ L P L +I +Q N A Q+F A +P +
Sbjct: 21 FSASASAASLQQYCTEKPPIKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFT 80
Query: 74 HNGPVYAAMIDILGNSGRISEMREVMDQMRDD--SCECKDSVFSFAIKTYASHGLLEDGI 133
HN Y +++ L + + +M +R+ +C +++F ++ Y G E +
Sbjct: 81 HNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSM 140
Query: 134 SLFKSLGRFNCTDRTQTFNTLLEILLNQSQLDAACQLFQQCSYGWEVKSRTQSLNLLMQS 193
+F + F ++ NTLL +L+ + D +F+ + + + NLL+++
Sbjct: 141 RIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKA 200
Query: 194 LCQRGQSELALHVFQEMDYQSCYPNRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRG 253
LC++ E A V E+ PN ++Y ++ G G + A +L M RG
Sbjct: 201 LCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEML----DRG 260
Query: 254 GGGDIVIYRTLLFALCDTGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQ-CRNSKLTIG 313
D Y L+ C G +A ++ + + ++ P Y + + C+ K G
Sbjct: 261 WYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIE-PNEVTYGVMIRALCKEKK--SG 320
Query: 314 EIKSLINEALIKGGIPSSDSYCAMAVDLYNENEIDQGDKVVSHMVAKGFRPPSSIYEAKA 373
E +++ +E L + +P S C + L ++++D+ + M+ P +++
Sbjct: 321 EARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLI 380
Query: 374 AALCKEGKVDDAVKVIEEEIVKGSGVPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVG 433
LCKEG+V +A K+ +E KGS +P++ YN ++ G+C++G+ T A M ++
Sbjct: 381 HWLCKEGRVTEARKLF-DEFEKGS-IPSLLTYNTLIAGMCEKGELTEAGRLWDDMYER-K 440
Query: 434 LVANKGTYSTLVHGLCRENRYVEACKVLEEMVIKSFSPCNNTFNTLIRGLCSVGKHYEAV 493
N TY+ L+ GL + E +VLEEM+ P TF L GL +GK +A+
Sbjct: 441 CKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAM 500
Query: 494 MWLEEMISQGQL 503
+ + G++
Sbjct: 501 KIVSMAVMNGKV 502
BLAST of CcUC06G111610 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 177.6 bits (449), Expect = 2.7e-44
Identity = 123/515 (23.88%), Postives = 242/515 (46.99%), Query Frame = 0
Query: 41 TPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEMREVMD 100
T L +R Q + A +LF A + P++ +Y ++ LG SG +M+++++
Sbjct: 49 TDVKLLDSLRSQPDDSAALRLFNLAS-KKPNFSPEPALYEEILLRLGRSGSFDDMKKILE 108
Query: 101 QMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFK-SLGRFNCTDRTQTFNTLLEILLNQ 160
M+ CE S F I++YA L ++ +S+ + F T +N +L +L++
Sbjct: 109 DMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDG 168
Query: 161 SQLDAACQLFQQCSYGWEVKSRTQSLNLLMQSLC-------------------------- 220
+ L ++ W +K + N+L+++LC
Sbjct: 169 NSLKLV-EISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 228
Query: 221 ---------QRGQSELALHVFQEMDYQSCYPNRLSYLILMKGLCQDGRLNEAIHLLYSMF 280
+ G + AL + ++M C + +S +++ G C++GR+ +A++ + M
Sbjct: 229 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM- 288
Query: 281 WRISQRGGGGDIVIYRTLLFALCDTGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRN 340
+Q G D + TL+ LC G ++ A+EI+ +L++G + + C+
Sbjct: 289 --SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK- 348
Query: 341 SKLTIGEIK---SLINEALIKGGIPSSDSYCAMAVDLYNENEIDQGDKVVSHMVAKGFRP 400
+GE+K ++++ + + P++ +Y + L EN++++ ++ + +KG P
Sbjct: 349 ----LGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 408
Query: 401 PSSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSGVPTVALYNIVLKGLCDEGKSTVAMEY 460
+ + LC A+++ EE KG P YN+++ LC +GK A+
Sbjct: 409 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC-EPDEFTYNMLIDSLCSKGKLDEALNM 468
Query: 461 LKKMAKQVGLVANKGTYSTLVHGLCRENRYVEACKVLEEMVIKSFSPCNNTFNTLIRGLC 517
LK+M + G + TY+TL+ G C+ N+ EA ++ +EM + S + T+NTLI GLC
Sbjct: 469 LKQM-ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 528
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038874865.1 | 3.9e-271 | 93.71 | pentatricopeptide repeat-containing protein At1g05600 [Benincasa hispida] | [more] |
XP_016902498.1 | 2.2e-266 | 92.11 | PREDICTED: pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cuc... | [more] |
XP_004140638.1 | 8.8e-263 | 90.89 | pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cucumis sativu... | [more] |
XP_023004266.1 | 7.0e-252 | 87.45 | pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima] >XP_023... | [more] |
KAG6592948.1 | 3.5e-251 | 87.45 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
Match Name | E-value | Identity | Description | |
Q9SYK1 | 1.4e-162 | 56.76 | Pentatricopeptide repeat-containing protein At1g05600 OS=Arabidopsis thaliana OX... | [more] |
Q9CA58 | 4.5e-44 | 24.27 | Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th... | [more] |
Q9FFE3 | 7.7e-44 | 24.39 | Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidop... | [more] |
Q9LFF1 | 3.8e-43 | 23.88 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
O49436 | 6.5e-43 | 25.53 | Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S4E2N8 | 1.1e-266 | 92.11 | pentatricopeptide repeat-containing protein At1g05600 isoform X1 OS=Cucumis melo... | [more] |
A0A5D3DM62 | 1.1e-266 | 92.11 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A0A0K9Q4 | 4.2e-263 | 90.89 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095860 PE=4 SV=1 | [more] |
A0A6J1KU44 | 3.4e-252 | 87.45 | pentatricopeptide repeat-containing protein At1g05600 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1DVG7 | 2.2e-251 | 86.35 | pentatricopeptide repeat-containing protein At1g05600 OS=Momordica charantia OX=... | [more] |
Match Name | E-value | Identity | Description | |
AT1G05600.1 | 9.9e-164 | 56.76 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G05600.2 | 9.9e-164 | 56.76 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G74580.1 | 3.2e-45 | 24.27 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G16420.1 | 5.5e-45 | 24.39 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT3G53700.1 | 2.7e-44 | 23.88 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |