CcUC06G111520 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G111520
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr06: 2269381 .. 2269833 (+)
RNA-Seq Expression	CcUC06G111520
Synteny	CcUC06G111520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTAGGCCTCGAGAAGATCCCCAATCTGGGGTTTTTTATGAGATTTCGTCTCTGCTTTTGAAAATTCTACGATCGCCACCTCCTCCGGTGCCTTTTTCCGATCATGTTCTGGAATTATCTTCAGCTATTTCGTCTTCGTCGAGGATTTTGCCTTCCTCTCAGATTACCCCAGCTGGATTTGCGGCGTTGCTTTTGGGGATTTCGTTGGCTTTAATGCTTTGTGGATCGGTTACTTTCTTCCTTGGTTTCATGTTGATGCCTTGGATTCTCGTTTTGGTGACGATTTGTTATGTGGTTGGGATCGTCTCTACCCTCTCTATGTTGGGACGCTCTTTACTTTGTTGTTTCACCGCTCCAACGCCTCGGAAAGATTTTCATGGCGAGTTTCTTTTCTCGTCATCTCTCCTTGATTTTATTGGATTTGATTTTTGGCTTCATTTCCTTATCTGA

mRNA sequence

ATGAGTAGGCCTCGAGAAGATCCCCAATCTGGGGTTTTTTATGAGATTTCGTCTCTGCTTTTGAAAATTCTACGATCGCCACCTCCTCCGGTGCCTTTTTCCGATCATGTTCTGGAATTATCTTCAGCTATTTCGTCTTCGTCGAGGATTTTGCCTTCCTCTCAGATTACCCCAGCTGGATTTGCGGCGTTGCTTTTGGGGATTTCGTTGGCTTTAATGCTTTGTGGATCGGTTACTTTCTTCCTTGGTTTCATGTTGATGCCTTGGATTCTCGTTTTGGTGACGATTTGTTATGTGGTTGGGATCGTCTCTACCCTCTCTATGTTGGGACGCTCTTTACTTTGTTGTTTCACCGCTCCAACGCCTCGGAAAGATTTTCATGGCGAGTTTCTTTTCTCGTCATCTCTCCTTGATTTTATTGGATTTGATTTTTGGCTTCATTTCCTTATCTGA

Coding sequence (CDS)

ATGAGTAGGCCTCGAGAAGATCCCCAATCTGGGGTTTTTTATGAGATTTCGTCTCTGCTTTTGAAAATTCTACGATCGCCACCTCCTCCGGTGCCTTTTTCCGATCATGTTCTGGAATTATCTTCAGCTATTTCGTCTTCGTCGAGGATTTTGCCTTCCTCTCAGATTACCCCAGCTGGATTTGCGGCGTTGCTTTTGGGGATTTCGTTGGCTTTAATGCTTTGTGGATCGGTTACTTTCTTCCTTGGTTTCATGTTGATGCCTTGGATTCTCGTTTTGGTGACGATTTGTTATGTGGTTGGGATCGTCTCTACCCTCTCTATGTTGGGACGCTCTTTACTTTGTTGTTTCACCGCTCCAACGCCTCGGAAAGATTTTCATGGCGAGTTTCTTTTCTCGTCATCTCTCCTTGATTTTATTGGATTTGATTTTTGGCTTCATTTCCTTATCTGA

Protein sequence

MSRPREDPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVTICYVVGIVSTLSMLGRSLLCCFTAPTPRKDFHGEFLFSSSLLDFIGFDFWLHFLI

Homology

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BLAST of CcUC06G111520 vs. NCBI nr
Match: KAG7014655.1 (hypothetical protein SDJN02_24834, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 223.8 bits (569), Expect = 1.0e-54
Identity = 118/144 (81.94%), Postives = 128/144 (88.89%), Query Frame = 0


Query: 1   MSRPREDPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPAG 60
           MSRP++DPQSG  +EISSLLLKILRSPPPPVPF+DHVLELSSAISSSS   PSSQ++P G
Sbjct: 143 MSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMSPTG 202

Query: 61  FAALLLGISLALMLCGSVTFFLGFMLMPWILVLVTICYVVGIVSTLSMLGRSLLCCFTAP 120
           FAALLLGISLALMLCGSVTFFLGFMLMPWILV V I Y+VGIVS++SMLGRS+LCCFTAP
Sbjct: 203 FAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFYMVGIVSSVSMLGRSILCCFTAP 262

Query: 121 TPRKDFHGEFLFSSSLLDFIGFDF 145
           TPRKDFHGEFLF    L FI F F
Sbjct: 263 TPRKDFHGEFLFCLCFLVFIRFGF 286

[Close]

BLAST of CcUC06G111520 vs. NCBI nr
Match: XP_038875874.1 (uncharacterized protein LOC120068233 [Benincasa hispida])

HSP 1 Score: 222.2 bits (565), Expect = 2.9e-54
Identity = 117/128 (91.41%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1   MSRPREDPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPAG 60
           M+RP++ PQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSS ILPSSQ+TPAG
Sbjct: 1   MNRPQQHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSGILPSSQMTPAG 60

Query: 61  FAALLLGISLALMLCGSVTFFLGFMLMPWILVLVTICYVVGIVSTLSMLGRSLLCCFTAP 120
           FAALLLGISLALMLCGSVTFFLGFMLMPWILV V I YV GIVS+LSMLGRSLLCCFTAP
Sbjct: 61  FAALLLGISLALMLCGSVTFFLGFMLMPWILVSVMIFYVAGIVSSLSMLGRSLLCCFTAP 120

Query: 121 TPRKDFHG 129
           TPRKDFHG
Sbjct: 121 TPRKDFHG 128

[Close]

BLAST of CcUC06G111520 vs. NCBI nr
Match: XP_004151234.1 (uncharacterized protein LOC101208751 [Cucumis sativus] >KGN46462.1 hypothetical protein Csa_004800 [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 1.9e-53
Identity = 118/129 (91.47%), Postives = 123/129 (95.35%), Query Frame = 0


Query: 1   MSRPREDPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAI-SSSSRILPSSQITPA 60
           M   R+DP+SGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAI SSSSRILPSSQ+TPA
Sbjct: 1   MIMARQDPRSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAITSSSSRILPSSQMTPA 60

Query: 61  GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVTICYVVGIVSTLSMLGRSLLCCFTA 120
           GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLV I YVVGIVS+LSMLGRSL+CCFTA
Sbjct: 61  GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMIFYVVGIVSSLSMLGRSLICCFTA 120

Query: 121 PTPRKDFHG 129
           PTPRKDFHG
Sbjct: 121 PTPRKDFHG 129

[Close]

BLAST of CcUC06G111520 vs. NCBI nr
Match: XP_008459845.1 (PREDICTED: uncharacterized protein LOC103498845 [Cucumis melo])

HSP 1 Score: 214.2 bits (544), Expect = 7.9e-52
Identity = 114/129 (88.37%), Postives = 123/129 (95.35%), Query Frame = 0


Query: 1   MSRPREDPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAI-SSSSRILPSSQITPA 60
           M+  ++DP+SGVF+EISSLLLKILRSPPPPVPFSDHVLELSS I SSSSRILPSSQ+TPA
Sbjct: 1   MNMAQQDPRSGVFHEISSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQMTPA 60

Query: 61  GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVTICYVVGIVSTLSMLGRSLLCCFTA 120
           GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLV I YVVGIVS+LS+LGRSL+CCFTA
Sbjct: 61  GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMIFYVVGIVSSLSVLGRSLICCFTA 120

Query: 121 PTPRKDFHG 129
           PTPRKDFHG
Sbjct: 121 PTPRKDFHG 129

[Close]

BLAST of CcUC06G111520 vs. NCBI nr
Match: XP_022155438.1 (uncharacterized protein LOC111022584 isoform X1 [Momordica charantia])

HSP 1 Score: 212.6 bits (540), Expect = 2.3e-51
Identity = 111/130 (85.38%), Postives = 121/130 (93.08%), Query Frame = 0


Query: 1   MSRPREDPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPAG 60
           M RPREDPQS V +EISSLL+KILRSPPPPVPFSDHVLELSS ISSSS +LPSSQITPAG
Sbjct: 2   MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAG 61

Query: 61  FAALLLGISLALMLCGSVTFFLGFMLMPWILVLVTICYVVGIVSTLSMLGRSLLCCFTAP 120
            A+LLLGISLALMLCGSVTFFLGF+LMPWILVLV I YVVGIVS+LSMLGRS+LCCF+AP
Sbjct: 62  LASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVVGIVSSLSMLGRSILCCFSAP 121

Query: 121 TPRKDFHGEF 131
           TPRKDF+ +F
Sbjct: 122 TPRKDFNAQF 131

[Close]

BLAST of CcUC06G111520 vs. ExPASy TrEMBL
Match: A0A0A0KDL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095290 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 9.2e-54
Identity = 118/129 (91.47%), Postives = 123/129 (95.35%), Query Frame = 0


Query: 1   MSRPREDPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAI-SSSSRILPSSQITPA 60
           M   R+DP+SGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAI SSSSRILPSSQ+TPA
Sbjct: 1   MIMARQDPRSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAITSSSSRILPSSQMTPA 60

Query: 61  GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVTICYVVGIVSTLSMLGRSLLCCFTA 120
           GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLV I YVVGIVS+LSMLGRSL+CCFTA
Sbjct: 61  GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMIFYVVGIVSSLSMLGRSLICCFTA 120

Query: 121 PTPRKDFHG 129
           PTPRKDFHG
Sbjct: 121 PTPRKDFHG 129

[Close]

BLAST of CcUC06G111520 vs. ExPASy TrEMBL
Match: A0A1S3CB48 (uncharacterized protein LOC103498845 OS=Cucumis melo OX=3656 GN=LOC103498845 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.8e-52
Identity = 114/129 (88.37%), Postives = 123/129 (95.35%), Query Frame = 0


Query: 1   MSRPREDPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAI-SSSSRILPSSQITPA 60
           M+  ++DP+SGVF+EISSLLLKILRSPPPPVPFSDHVLELSS I SSSSRILPSSQ+TPA
Sbjct: 1   MNMAQQDPRSGVFHEISSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQMTPA 60

Query: 61  GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVTICYVVGIVSTLSMLGRSLLCCFTA 120
           GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLV I YVVGIVS+LS+LGRSL+CCFTA
Sbjct: 61  GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMIFYVVGIVSSLSVLGRSLICCFTA 120

Query: 121 PTPRKDFHG 129
           PTPRKDFHG
Sbjct: 121 PTPRKDFHG 129

[Close]

BLAST of CcUC06G111520 vs. ExPASy TrEMBL
Match: A0A6J1DMY8 (uncharacterized protein LOC111022584 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022584 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.1e-51
Identity = 111/130 (85.38%), Postives = 121/130 (93.08%), Query Frame = 0


Query: 1   MSRPREDPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPAG 60
           M RPREDPQS V +EISSLL+KILRSPPPPVPFSDHVLELSS ISSSS +LPSSQITPAG
Sbjct: 2   MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAG 61

Query: 61  FAALLLGISLALMLCGSVTFFLGFMLMPWILVLVTICYVVGIVSTLSMLGRSLLCCFTAP 120
            A+LLLGISLALMLCGSVTFFLGF+LMPWILVLV I YVVGIVS+LSMLGRS+LCCF+AP
Sbjct: 62  LASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVVGIVSSLSMLGRSILCCFSAP 121

Query: 121 TPRKDFHGEF 131
           TPRKDF+ +F
Sbjct: 122 TPRKDFNAQF 131

[Close]

BLAST of CcUC06G111520 vs. ExPASy TrEMBL
Match: A0A6J1DPD1 (uncharacterized protein LOC111022584 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111022584 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.9e-51
Identity = 111/128 (86.72%), Postives = 120/128 (93.75%), Query Frame = 0


Query: 1   MSRPREDPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPAG 60
           M RPREDPQS V +EISSLL+KILRSPPPPVPFSDHVLELSS ISSSS +LPSSQITPAG
Sbjct: 2   MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAG 61

Query: 61  FAALLLGISLALMLCGSVTFFLGFMLMPWILVLVTICYVVGIVSTLSMLGRSLLCCFTAP 120
            A+LLLGISLALMLCGSVTFFLGF+LMPWILVLV I YVVGIVS+LSMLGRS+LCCF+AP
Sbjct: 62  LASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVVGIVSSLSMLGRSILCCFSAP 121

Query: 121 TPRKDFHG 129
           TPRKDF+G
Sbjct: 122 TPRKDFNG 129

[Close]

BLAST of CcUC06G111520 vs. ExPASy TrEMBL
Match: A0A6J1DMF9 (uncharacterized protein LOC111022584 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022584 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.2e-50
Identity = 110/127 (86.61%), Postives = 119/127 (93.70%), Query Frame = 0


Query: 1   MSRPREDPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPAG 60
           M RPREDPQS V +EISSLL+KILRSPPPPVPFSDHVLELSS ISSSS +LPSSQITPAG
Sbjct: 2   MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAG 61

Query: 61  FAALLLGISLALMLCGSVTFFLGFMLMPWILVLVTICYVVGIVSTLSMLGRSLLCCFTAP 120
            A+LLLGISLALMLCGSVTFFLGF+LMPWILVLV I YVVGIVS+LSMLGRS+LCCF+AP
Sbjct: 62  LASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVVGIVSSLSMLGRSILCCFSAP 121

Query: 121 TPRKDFH 128
           TPRKDF+
Sbjct: 122 TPRKDFN 128

[Close]

BLAST of CcUC06G111520 vs. TAIR 10
Match: AT1G27290.1 (unknown protein; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 125.2 bits (313), Expect = 4.5e-29
Identity = 72/130 (55.38%), Postives = 94/130 (72.31%), Query Frame = 0


Query: 1   MSRPREDPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAIS---SSSRILPSS--- 60
           M R R++ QS VFY++SSL+L +LRSPP P+   DH  +  + I    SS R   SS   
Sbjct: 2   MRRQRDEQQSRVFYDLSSLVLNLLRSPPMPISLPDHFPDPPARIRPPFSSHRFSSSSPSL 61

Query: 61  -QITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVTICYVVGIVSTLSMLGRSL 120
             I+P+GFA+LLLGIS+ALMLCGSVTFF+GF+LMPW+L L+ + YV GIVS +SM+GRS+
Sbjct: 62  AHISPSGFASLLLGISVALMLCGSVTFFIGFLLMPWVLALILVFYVAGIVSAISMVGRSI 121

Query: 121 LC-CFTAPTP 123
           LC   T P+P
Sbjct: 122 LCYVLTPPSP 131

[Close]

BLAST of CcUC06G111520 vs. TAIR 10
Match: AT1G27290.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 125.2 bits (313), Expect = 4.5e-29
Identity = 72/130 (55.38%), Postives = 94/130 (72.31%), Query Frame = 0


Query: 1   MSRPREDPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAIS---SSSRILPSS--- 60
           M R R++ QS VFY++SSL+L +LRSPP P+   DH  +  + I    SS R   SS   
Sbjct: 2   MRRQRDEQQSRVFYDLSSLVLNLLRSPPMPISLPDHFPDPPARIRPPFSSHRFSSSSPSL 61

Query: 61  -QITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVTICYVVGIVSTLSMLGRSL 120
             I+P+GFA+LLLGIS+ALMLCGSVTFF+GF+LMPW+L L+ + YV GIVS +SM+GRS+
Sbjct: 62  AHISPSGFASLLLGISVALMLCGSVTFFIGFLLMPWVLALILVFYVAGIVSAISMVGRSI 121

Query: 121 LC-CFTAPTP 123
           LC   T P+P
Sbjct: 122 LCYVLTPPSP 131

The following BLAST results are available for this feature:

BLAST of CcUC06G111520 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014655.1	1.0e-54	81.94	hypothetical protein SDJN02_24834, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_038875874.1	2.9e-54	91.41	uncharacterized protein LOC120068233 [Benincasa hispida]	[more]
XP_004151234.1	1.9e-53	91.47	uncharacterized protein LOC101208751 [Cucumis sativus] >KGN46462.1 hypothetical ...	[more]
XP_008459845.1	7.9e-52	88.37	PREDICTED: uncharacterized protein LOC103498845 [Cucumis melo]	[more]
XP_022155438.1	2.3e-51	85.38	uncharacterized protein LOC111022584 isoform X1 [Momordica charantia]	[more]

BLAST of CcUC06G111520 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC06G111520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDL5	9.2e-54	91.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095290 PE=4 SV=1	[more]
A0A1S3CB48	3.8e-52	88.37	uncharacterized protein LOC103498845 OS=Cucumis melo OX=3656 GN=LOC103498845 PE=...	[more]
A0A6J1DMY8	1.1e-51	85.38	uncharacterized protein LOC111022584 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DPD1	1.9e-51	86.72	uncharacterized protein LOC111022584 isoform X4 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DMF9	1.2e-50	86.61	uncharacterized protein LOC111022584 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CcUC06G111520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G27290.1	4.5e-29	55.38	unknown protein; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bac...	[more]
AT1G27290.2	4.5e-29	55.38	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34781:SF2	TRANSMEMBRANE PROTEIN	coord: 1..128
None	No IPR available	PANTHER	PTHR34781	TRANSMEMBRANE PROTEIN	coord: 1..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G111520.1	CcUC06G111520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane