CcUC06G110580 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G110580
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	BEST Arabidopsis thaliana protein match is: reduced male fertility .
Location	CicolChr06: 1110990 .. 1115250 (-)
RNA-Seq Expression	CcUC06G110580
Synteny	CcUC06G110580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAGAAACTGAGCATTGCCTCAGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGAGCAAAATTGTCGAAGCGATCATCGCCGAATTCAGTTGTTGCTGCAGAGCCGGAAGGAATGGTAAAGCGAATGCGAAGAGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCGCTTTTCTTACTGCGCATTCTTCTGCTTCATCCTCTGCATCTTCGTCTTCCTGCTGGTTCGTTCTCTTCCTCTTTCTGTCTCCATCCTGATAGTCGCTGTTACGTAGGTCATTTCAATTCCGATACGAGTTTCGCGCGTAAATACGTGTCCCGCCGTAGAGGTAAATGCCTAAGTGTTTTCTAGTGCCGTGATAATCAGGAAATTCAAATTTGATTTTCTAGAAGTGATTGAATTACTTAGTTCACAAAATTGAGAGTTGAAGTTATTTCCTCAACTTTAAGCTCTATGAGCTCGATTGTGTAGTCGCATTTGTTTAGTACTGCTAAGGACTTTGAACTAGAAAGAAATGAACGTCTGCAGAGTTATATCTACGCAGAACAAACTTGTTCGTTTTCTCCATAAGGAGAAGACAATGAAGAAGAAACGTTTAGTCATGTGATTTTAGGATTCGAAAACTGAGTGACAGTCTTTGTTGAAAACCACTACGAGTTGATGAACACTTTCTGGAGCTATAAAGAATTTGATCGTAAGTACATTTTGGAATATAATTAGTATTGCCAATTCTTCAGTATATTTTGATTGTTTACTTGACACAAGGATCGAAACAGTTTCAGGACTCTTTCAATTTATAGCTAGACTCTTTCAATTTATAGCTAGTTCTGTAATTACATTTCTTACTTTTTATCACATTAAGTATTCCGAGTCCCCTGGTTTTCTTTTTTACTTCATCATTTACTTTTCTATGTATTTGGTTCTACCTATAAGATTTCAAAAACGCGATCGTTCTATTTTTTACATATTCAATTTTAAATCAGTTATTATTTCAGTTTAAGTTTATTTGTATAAGATTGATGAATCATAGAAATTATTTATTGTTTCTACCAGTTTGAATATTTCATCGGAAACAAAGTTGAGGATCACTATGTAATTTAACCTTATGAAAATTTCCGCAAATAAACATGAAAGGTACGACGCGGACGTTTGGACAGAGGTTGCGAAGTTTCTGGATGGAAGATCTTTGATTATGCTTGCGGCGACTAGCCGGTGGTTTTACCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTTCAGGTCCCTGCCCCTCAACATACGGCCTTCAAATGGATCAAACTCTACGTTTCTGCCTTCGGTAAGGATCGGATTCGAGTTCTCCGAGTTGTATTTCTGCTCTGGTGAATATGTATTGCGTTTGCTTAACTATTCAATGACCCGTGTTCCAGACGGAAGTCACTCTTACATATTCCGGCAGCAGGAGAAACATCTCGGTGAGTGGTTGTTTGTGATTCCACTTGACTCCTTAAAGTAATTTGGCGTCCGGTTTTACTTAACTGCAACTAAATGTCAAGGTCCTGTTTAGCCACGGCTACTGTCTAATCTTCTTATCAGTTTATCAAATCTTACCTAATAATTAGACATTCATTTTTTATTCAACCATAAGTCAGGTGATATACTACTACTTTCCGTCCTCATGTATAGAATAGATATTTAGTGATCCTGATTCCTATATACTAATTAACTGTAGTTTGCTTCTCTACCACATCGTTTATTTATTTATTTATTTTAACCAAACCAGATTGGATGCGGATTGGGGCATTTTTCCTAGATTCTTCAGTAGCACTCCTGTCAGAAAGGCTAGGCTCCCAAATGAAAATCCCGAAACAGGATTCAACGGATAAAACATTGGAGTCCGGTTGTTGTGTCTTGCACAATGTTAAAGCGGGGATCTGGATAGCTGGTATCAAGCTTGCTAAATGTTTTTGACATTTTCTTTCAATTGTTATTATAACTTGATACTCCTATTAACCTTTTCTTAAGTAAATTTATATTCTAAATGGACTAATGTGGCAGATCTACAACTAGTTCGTTGTCCCGTTTGCGACCTGAATACATGCGATGGTAGGCATCCAAGTAAACATTTTGTATCCCACAAAAATGTAGGAACCTCTTTTTATTTCAGTTGTTGCAAGATCTCAGCCTACAGTTGTACCGTTCTAGTAATTGGCATGCCACATTGCATTTAAAAGAGTTGGGGAATCCACTTCCAAATCTCATTAAAAATGAATTTAATTTCGATTTCCAATACCTTAGGAAAGTGGATGATACTGAGCACATACCCTAATCATCTGCTAATCAGCATTAATTCACTGCTGATAGAAGGGTTTTAACACATCCAAACAAGAATTCAATCTGTAAAAATAATTTGTATTCAAAATTTTAATCAGTGGATGTATCGCTGCAAAAAGAATTTGTTGGCTCTTGCTGACCTTGCTACTGTTATTATGTAGGAACAATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAATGAAGGTTACCAAGATGGTAGTTGGGAGTATCAGATTGTAGGTTCTCATGATATCAGGAAACCTACAGAGTCAGCTTCAGGAGCCATTTTTGATGTCAAGCACCTGAAAGACTCTTCAACCTCAGGTATAGCACAGCCACCCCATACTGATGCTTCTGAAAATTATTGCTGTAAGATCTTTTCTTGCTGCACTATTACACAAGCAGGAATATCATATTCTTTACGCAAGTTTAATAATTTAGATACTATCCATGAAAAGTAATTTTTTAATATGCTATATTACTCGATGAAATTCTTGAATTATTAATTTATCCCTCTTGAAGAAAATTCTGTGCAATTTTTAGCTACAAATTGTAGACCATGGAAGGAATACTCTTATTCTTTCTTTAGCTGAAAATTATAGTCATATATGGTGAAAGCTATTTCAGAATCTGTTTAGAACACACTAAAAATACAACACAAGATCTGAGTTCAAATTCCTGCAAGAGAAATTGAGATAATTAAGGAGATTCGATAATTATGAACTATGGTAAGATTTTTCCCAAATGAATTGACAGGAATACTGGATTTGAAGTCATGGACGGGAAATCGAACTGATTGGCAACCAAAGGCAATGGTTACTCTCAACGCAGTTGCTGTAAATACCTATTTACAAGAAAATGAAGGTAAATCCCCTCCAGTTTTATATGATATTCAAAACGATGAAAAGTACTTTTAATCGTTTAGAAAGCATTTCTTATAATTTTCTTAGTCTTAAGTCAATTCAATTCAATAAAAAGTTTGTATCTGTTTGGAATACATTTTCAAGTGTTTAATTTAAAAAATAAGTTATGTTGAAAAAGCTTAGAGTGTTTGGCAACCACTCAAAATAGGTTTTTAGGTGTATTTTAAACAATTTTCTTTTATCAAAATATTTAAATAAAAATGAGTTTTTGTTAAAAGCATTTTTTTCTCAAGTCAATCCAAACGAATTCGTTTTTGAAAACACTTGCTCTTACTTTTAAAAGAATTTTTTTAGTATTCTATTAAAGATGCATATAGAAAAGGTGTTTTACTTTGAAGTACTTAAAATAAGCGATTTTAATAAAAATAATTTGATTACATGCACTTAACTGTAAAGTTTGATACAAATGTTAGGCTATATATTCTTAAAATACGTTCAACACGTCTTAACAACCACCTTGGTCAAAGACAATCTATTTCTACTTTCAACACGTCTTAACAATCACCTTGGTCAAAGACAATCTATTTCAAAGGTAAATCACTTCGAAATATGGCAAATTTAATCATGAAAAAAATTGTTAATAGCCATGCCAAAAGCACTCCTGTAACTTTCTACTCGATTGGTAAAAGCACTAGTAAATTAAATGTCTTTAAGGCTTGTTTGGATTAACTTTCTAAATGCTTAAATGGATTGACTTTTTAAGTGCTTCAAAAATTTTAAGCACTGTGAATCCAAAACAACAACTTTAAAACATAAAAAAAAAAAAAAATCATTTCCAACCATGTCAATAAAGCAGTCCTAAACAAAACCTATGCTCGGATGTGTTAATTAGTAATATTAATTAGTATTTGATTGAGATTGAGATGTGATTTTAATTTGTATGGCGCATGCAGGAGTTCATGTGAAATACCAGGCCATGAGAGCCGGAGCAAACGGAGAGGTTGTTTCTATCAGAATTTCTCAGCAGCTTCTTTAG

mRNA sequence

ATGGGGAAGAAACTGAGCATTGCCTCAGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGAGCAAAATTGTCGAAGCGATCATCGCCGAATTCAGTTGTTGCTGCAGAGCCGGAAGGAATGGTAAAGCGAATGCGAAGAGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCGCTTTTCTTACTGCGCATTCTTCTGCTTCATCCTCTGCATCTTCGTCTTCCTGCTGGTACGACGCGGACGTTTGGACAGAGGTTGCGAAGTTTCTGGATGGAAGATCTTTGATTATGCTTGCGGCGACTAGCCGGTGGTTTTACCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTTCAGGTCCCTGCCCCTCAACATACGGCCTTCAAATGGATCAAACTCTACGTTTCTGCCTTCGACGGAAGTCACTCTTACATATTCCGGCAGCAGGAGAAACATCTCGATTGGATGCGGATTGGGGCATTTTTCCTAGATTCTTCAGTAGCACTCCTGTCAGAAAGGCTAGGCTCCCAAATGAAAATCCCGAAACAGGATTCAACGGATAAAACATTGGAGTCCGGTTGTTGTGTCTTGCACAATGTTAAAGCGGGGATCTGGATAGCTGATCTACAACTAGTTCGTTGTCCCGTTTGCGACCTGAATACATGCGATGGAACAATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAATGAAGGTTACCAAGATGGTAGTTGGGAGTATCAGATTGTAGGTTCTCATGATATCAGGAAACCTACAGAGTCAGCTTCAGGAGCCATTTTTGATGTCAAGCACCTGAAAGACTCTTCAACCTCAGGAATACTGGATTTGAAGTCATGGACGGGAAATCGAACTGATTGGCAACCAAAGGCAATGGTTACTCTCAACGCAGTTGCTGTAAATACCTATTTACAAGAAAATGAAGGAGTTCATGTGAAATACCAGGCCATGAGAGCCGGAGCAAACGGAGAGGTTGTTTCTATCAGAATTTCTCAGCAGCTTCTTTAG

Coding sequence (CDS)

ATGGGGAAGAAACTGAGCATTGCCTCAGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGAGCAAAATTGTCGAAGCGATCATCGCCGAATTCAGTTGTTGCTGCAGAGCCGGAAGGAATGGTAAAGCGAATGCGAAGAGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCGCTTTTCTTACTGCGCATTCTTCTGCTTCATCCTCTGCATCTTCGTCTTCCTGCTGGTACGACGCGGACGTTTGGACAGAGGTTGCGAAGTTTCTGGATGGAAGATCTTTGATTATGCTTGCGGCGACTAGCCGGTGGTTTTACCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTTCAGGTCCCTGCCCCTCAACATACGGCCTTCAAATGGATCAAACTCTACGTTTCTGCCTTCGACGGAAGTCACTCTTACATATTCCGGCAGCAGGAGAAACATCTCGATTGGATGCGGATTGGGGCATTTTTCCTAGATTCTTCAGTAGCACTCCTGTCAGAAAGGCTAGGCTCCCAAATGAAAATCCCGAAACAGGATTCAACGGATAAAACATTGGAGTCCGGTTGTTGTGTCTTGCACAATGTTAAAGCGGGGATCTGGATAGCTGATCTACAACTAGTTCGTTGTCCCGTTTGCGACCTGAATACATGCGATGGAACAATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAATGAAGGTTACCAAGATGGTAGTTGGGAGTATCAGATTGTAGGTTCTCATGATATCAGGAAACCTACAGAGTCAGCTTCAGGAGCCATTTTTGATGTCAAGCACCTGAAAGACTCTTCAACCTCAGGAATACTGGATTTGAAGTCATGGACGGGAAATCGAACTGATTGGCAACCAAAGGCAATGGTTACTCTCAACGCAGTTGCTGTAAATACCTATTTACAAGAAAATGAAGGAGTTCATGTGAAATACCAGGCCATGAGAGCCGGAGCAAACGGAGAGGTTGTTTCTATCAGAATTTCTCAGCAGCTTCTTTAG

Protein sequence

MGKKLSIASARDRVVTRSQSIAMERAKLSKRSSPNSVVAAEPEGMVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLIMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDKTLESGCCVLHNVKAGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGNRTDWQPKAMVTLNAVAVNTYLQENEGVHVKYQAMRAGANGEVVSIRISQQLL

Homology

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BLAST of CcUC06G110580 vs. NCBI nr
Match: XP_038875515.1 (probable F-box protein At3g61730 [Benincasa hispida])

HSP 1 Score: 696.4 bits (1796), Expect = 1.2e-196
Identity = 345/354 (97.46%), Postives = 351/354 (99.15%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMERAKLSKRSSPNSVVAAEPEGMVKRMRRDIKPIHSCS 60
           MGKKLSIASARDRVVTRS SIAMERAK+SKRSSPNSVVAAEPEG VKRMRRDIKPIHSCS
Sbjct: 1   MGKKLSIASARDRVVTRSLSIAMERAKMSKRSSPNSVVAAEPEGTVKRMRRDIKPIHSCS 60

Query: 61  SPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLIMLAATSRWFYRLVMEDSI 120
           SPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSL+MLAATSRWFYRLVMEDSI
Sbjct: 61  SPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSI 120

Query: 121 WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVAL 180
           WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVAL
Sbjct: 121 WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVAL 180

Query: 181 LSERLGSQMKIPKQDSTDKTLESGCCVLHNVKAGIWIADLQLVRCPVCDLNTCDGTMQTL 240
           LSERLGSQMKIPKQDSTDKTLESGCCVLHNVK GIWIADLQLVRCPVCDLNTCDGTMQTL
Sbjct: 181 LSERLGSQMKIPKQDSTDKTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTL 240

Query: 241 DARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWT 300
           DARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWT
Sbjct: 241 DARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWT 300

Query: 301 GNRTDWQPKAMVTLNAVAVNTYLQENEGVHVKYQAMRAGANGEVVSIRISQQLL 355
           G+RTDWQPKAM+TLNAVAVNTYLQ+NEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 301 GSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 354

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BLAST of CcUC06G110580 vs. NCBI nr
Match: XP_004140675.1 (probable F-box protein At3g61730 [Cucumis sativus] >KGN46347.1 hypothetical protein Csa_005078 [Cucumis sativus])

HSP 1 Score: 686.8 bits (1771), Expect = 9.9e-194
Identity = 341/355 (96.06%), Postives = 349/355 (98.31%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMERAKLSKRSSP-NSVVAAEPEGMVKRMRRDIKPIHSC 60
           MGKKLSIASARDRVVTRSQSI+MERAK++KRSSP N VVAAEPEGMVKRMRRDIKPIHSC
Sbjct: 1   MGKKLSIASARDRVVTRSQSISMERAKMTKRSSPKNPVVAAEPEGMVKRMRRDIKPIHSC 60

Query: 61  SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLIMLAATSRWFYRLVMEDS 120
           SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSL+MLAATSRWFYR VMEDS
Sbjct: 61  SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRSVMEDS 120

Query: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVA 180
           IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSVA
Sbjct: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVA 180

Query: 181 LLSERLGSQMKIPKQDSTDKTLESGCCVLHNVKAGIWIADLQLVRCPVCDLNTCDGTMQT 240
           LLSERLGSQMKIPKQDSTD TLESGCCVLHNVK GIWIADLQLVRCPVCDLNTCDGTMQT
Sbjct: 181 LLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240

Query: 241 LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSW 300
           LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHL+DSSTSG+LDLKSW
Sbjct: 241 LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGLLDLKSW 300

Query: 301 TGNRTDWQPKAMVTLNAVAVNTYLQENEGVHVKYQAMRAGANGEVVSIRISQQLL 355
           TGNRTDWQPKAM+TLNAVAVNTYLQ+NEGVHVKYQAMRAGANGEVVSIRISQQLL
Sbjct: 301 TGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 355

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BLAST of CcUC06G110580 vs. NCBI nr
Match: XP_023548391.1 (probable F-box protein At3g61730 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 678.3 bits (1749), Expect = 3.5e-191
Identity = 335/354 (94.63%), Postives = 345/354 (97.46%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMERAKLSKRSSPNSVVAAEPEGMVKRMRRDIKPIHSCS 60
           MGKKLSIASARDRVVTRSQSIAMER K+S  SSPN VVA EPEGMVKRMRRDIKPIHSCS
Sbjct: 1   MGKKLSIASARDRVVTRSQSIAMEREKIS--SSPNPVVAVEPEGMVKRMRRDIKPIHSCS 60

Query: 61  SPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLIMLAATSRWFYRLVMEDSI 120
           SPRS FLTAHSSASSSASSS+CWYDADVWTEVAKFLDGRSL+MLAATSRWFYRLVMEDSI
Sbjct: 61  SPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSI 120

Query: 121 WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVAL 180
           WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFF+DSSV L
Sbjct: 121 WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVL 180

Query: 181 LSERLGSQMKIPKQDSTDKTLESGCCVLHNVKAGIWIADLQLVRCPVCDLNTCDGTMQTL 240
           LSERLGSQ+KIPKQDSTD TLESGCCVLHNVK GIWIADLQLVRCPVCDLNTCDGTMQTL
Sbjct: 181 LSERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTL 240

Query: 241 DARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWT 300
           DARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWT
Sbjct: 241 DARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWT 300

Query: 301 GNRTDWQPKAMVTLNAVAVNTYLQENEGVHVKYQAMRAGANGEVVSIRISQQLL 355
           G+RTDWQPKAM+TLNAVAVNTYLQ+NEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 301 GSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 352

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BLAST of CcUC06G110580 vs. NCBI nr
Match: TYK24589.1 (putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 674.5 bits (1739), Expect = 5.1e-190
Identity = 336/356 (94.38%), Postives = 345/356 (96.91%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMERAKLSKRSSP--NSVVAAEPEGMVKRMRRDIKPIHS 60
           M KKLSIASARDRVVTRSQSI+MERAK+SKRSSP  N VVAAEPEGMVKRMRRDIKPIHS
Sbjct: 1   MAKKLSIASARDRVVTRSQSISMERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHS 60

Query: 61  CSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLIMLAATSRWFYRLVMED 120
           CSSP SAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSL+MLAATSRWFYRLVMED
Sbjct: 61  CSSPHSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120

Query: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSV 180
           SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSV
Sbjct: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV 180

Query: 181 ALLSERLGSQMKIPKQDSTDKTLESGCCVLHNVKAGIWIADLQLVRCPVCDLNTCDGTMQ 240
           ALLSERLGSQMK+PKQ ST  TLESGCCVLHNVK GIWIADLQLVRCPVCDLNTCDGTMQ
Sbjct: 181 ALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240

Query: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKS 300
           TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHL+DSSTSGILDLKS
Sbjct: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKS 300

Query: 301 WTGNRTDWQPKAMVTLNAVAVNTYLQENEGVHVKYQAMRAGANGEVVSIRISQQLL 355
           WTG+R DWQPKAM+TL+AVAVNTYLQ+NEGVHVKYQAMRAGANGEVVSIRISQQLL
Sbjct: 301 WTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 356

[Close]

BLAST of CcUC06G110580 vs. NCBI nr
Match: XP_008459999.1 (PREDICTED: probable F-box protein At3g61730 [Cucumis melo])

HSP 1 Score: 641.3 bits (1653), Expect = 4.8e-180
Identity = 316/334 (94.61%), Postives = 324/334 (97.01%), Query Frame = 0


Query: 23  MERAKLSKRSSP--NSVVAAEPEGMVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSS 82
           MERAK+SKRSSP  N VVAAEPEGMVKRMRRDIKPIHSCSSP SAFLTAHSSASSSASSS
Sbjct: 1   MERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHSCSSPHSAFLTAHSSASSSASSS 60

Query: 83  SCWYDADVWTEVAKFLDGRSLIMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK 142
           SCWYDADVWTEVAKFLDGRSL+MLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK
Sbjct: 61  SCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK 120

Query: 143 WIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDKT 202
           WIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSVALLSERLGSQMK+PKQ ST  T
Sbjct: 121 WIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPKQGSTANT 180

Query: 203 LESGCCVLHNVKAGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY 262
           LESGCCVLHNVK GIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY
Sbjct: 181 LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY 240

Query: 263 QIVGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGNRTDWQPKAMVTLNAVAVN 322
           QIVGSHDIRKPTESASGAIFDVKHL+DSSTSGILDLKSWTG+R DWQPKAM+TL+AVAVN
Sbjct: 241 QIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMITLSAVAVN 300

Query: 323 TYLQENEGVHVKYQAMRAGANGEVVSIRISQQLL 355
           TYLQ+NEGVHVKYQAMRAGANGEVVSIRISQQLL
Sbjct: 301 TYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 334

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BLAST of CcUC06G110580 vs. ExPASy Swiss-Prot
Match: Q9M365 (Probable F-box protein At3g61730 OS=Arabidopsis thaliana OX=3702 GN=RMF PE=1 SV=2)

HSP 1 Score: 397.9 bits (1021), Expect = 1.2e-109
Identity = 187/340 (55.00%), Postives = 254/340 (74.71%), Query Frame = 0


Query: 25  RAKLSKRSSPNSVVAAEPEGMVKRM---------RRDIKPIHSCSSPRSAFLTAHSSASS 84
           + KL + +   + +  E +G  KR           + ++ I  C SPR +  T  S  S 
Sbjct: 28  KRKLVQSNEQKNDIQREEDGRAKRRIVQSSDQKNGKILRGIRGCVSPRCSAQTYQSRFS- 87

Query: 85  SASSSSCWYDADVWTEVAKFLDGRSLIMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQ 144
                  WY+ D+WT +++FLDG+SL+ L AT++WFY++ MED++W++ CLRDLQVP P 
Sbjct: 88  -------WYEQDIWTYISRFLDGKSLVKLGATNKWFYKIAMEDTVWRFACLRDLQVPVPF 147

Query: 145 HTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQD 204
             +  WIK+Y SAFDGSHSY+FRQ+EKH+DWMRIGAF LDS  +LL+E L  ++K P++ 
Sbjct: 148 PVSSTWIKIYASAFDGSHSYLFRQKEKHIDWMRIGAFVLDSRTSLLTESLSGRLKFPREG 207

Query: 205 STDKTLE-SGCCVLHNVKAGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQ 264
           + ++ L+ SG C+++++K+GIWIADLQLVRCPVCDL+TCDGTMQTLDARHIELFL+EGY+
Sbjct: 208 TIERMLQSSGSCLINDIKSGIWIADLQLVRCPVCDLSTCDGTMQTLDARHIELFLSEGYK 267

Query: 265 DGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGNRTDWQPKAMVTL 324
           DGSW+Y ++GSH ++K   +A GAIFD+KHLK+SS SGIL+LKSWTG   D QPKA++  
Sbjct: 268 DGSWDYNLIGSHKLQKNASAACGAIFDLKHLKESSYSGILNLKSWTGESNDSQPKAVIAP 327

Query: 325 NAVAVNTYLQENEGVHVKYQAMRAGANGEVVSIRISQQLL 355
           +AVAV+T LQENEG+ VKY  M+AG +G++VSIRISQQLL
Sbjct: 328 HAVAVHTRLQENEGILVKYHTMKAGTDGDIVSIRISQQLL 359

[Close]

BLAST of CcUC06G110580 vs. ExPASy Swiss-Prot
Match: Q9FGB8 (Probable F-box protein At5g36000 OS=Arabidopsis thaliana OX=3702 GN=At5g36000 PE=2 SV=2)

HSP 1 Score: 387.1 bits (993), Expect = 2.1e-106
Identity = 174/303 (57.43%), Postives = 236/303 (77.89%), Query Frame = 0


Query: 53  IKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLIMLAATSRWFY 112
           ++ IH C SPR +  T  S  S        WY+ D+WT + +FLDG+SL+ L AT++WFY
Sbjct: 61  LRGIHGCVSPRCSAPTYQSRFS--------WYEQDIWTYITRFLDGKSLVKLGATNKWFY 120

Query: 113 RLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF 172
           ++ MED++W++ CLRDLQVP     +  WIK+Y SAFDGSHSY+F Q+EKH+DWMR+GAF
Sbjct: 121 KIAMEDTVWRFACLRDLQVPETFPVSSTWIKIYASAFDGSHSYLFHQKEKHIDWMRLGAF 180

Query: 173 FLDSSVALLSERLGSQMKIPKQDSTDKTLE-SGCCVLHNVKAGIWIADLQLVRCPVCDLN 232
            LDS  + L+E L  ++K+P + + ++ L+ SG C+++++K+GIWIADLQL+RCP+CDL+
Sbjct: 181 VLDSRTSFLTESLSGRLKVPTEGTIEQMLQSSGSCLINDIKSGIWIADLQLLRCPLCDLS 240

Query: 233 TCDGTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS 292
           TCDGTMQTLD RHIELFL+EGY+DGSW+Y ++GSH + K   +A GAIFD+KHLK SS+S
Sbjct: 241 TCDGTMQTLDVRHIELFLSEGYKDGSWDYNLIGSHKLEKDASAACGAIFDLKHLKKSSSS 300

Query: 293 GILDLKSWTGNRTDWQPKAMVTLNAVAVNTYLQENEGVHVKYQAMRAGANGEVVSIRISQ 352
           GIL+LKSWTG   D QPKA++  +AVAV+T LQ+NEG+ VKY  M+AG +G++VSIRISQ
Sbjct: 301 GILNLKSWTGEADDSQPKAVIAPHAVAVHTRLQQNEGILVKYHTMKAGTDGDIVSIRISQ 355

Query: 353 QLL 355
           QLL
Sbjct: 361 QLL 355

[Close]

BLAST of CcUC06G110580 vs. ExPASy TrEMBL
Match: A0A0A0KD88 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087760 PE=4 SV=1)

HSP 1 Score: 686.8 bits (1771), Expect = 4.8e-194
Identity = 341/355 (96.06%), Postives = 349/355 (98.31%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMERAKLSKRSSP-NSVVAAEPEGMVKRMRRDIKPIHSC 60
           MGKKLSIASARDRVVTRSQSI+MERAK++KRSSP N VVAAEPEGMVKRMRRDIKPIHSC
Sbjct: 1   MGKKLSIASARDRVVTRSQSISMERAKMTKRSSPKNPVVAAEPEGMVKRMRRDIKPIHSC 60

Query: 61  SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLIMLAATSRWFYRLVMEDS 120
           SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSL+MLAATSRWFYR VMEDS
Sbjct: 61  SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRSVMEDS 120

Query: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVA 180
           IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSVA
Sbjct: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVA 180

Query: 181 LLSERLGSQMKIPKQDSTDKTLESGCCVLHNVKAGIWIADLQLVRCPVCDLNTCDGTMQT 240
           LLSERLGSQMKIPKQDSTD TLESGCCVLHNVK GIWIADLQLVRCPVCDLNTCDGTMQT
Sbjct: 181 LLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240

Query: 241 LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSW 300
           LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHL+DSSTSG+LDLKSW
Sbjct: 241 LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGLLDLKSW 300

Query: 301 TGNRTDWQPKAMVTLNAVAVNTYLQENEGVHVKYQAMRAGANGEVVSIRISQQLL 355
           TGNRTDWQPKAM+TLNAVAVNTYLQ+NEGVHVKYQAMRAGANGEVVSIRISQQLL
Sbjct: 301 TGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 355

[Close]

BLAST of CcUC06G110580 vs. ExPASy TrEMBL
Match: A0A5D3DMQ8 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001350 PE=4 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 2.5e-190
Identity = 336/356 (94.38%), Postives = 345/356 (96.91%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMERAKLSKRSSP--NSVVAAEPEGMVKRMRRDIKPIHS 60
           M KKLSIASARDRVVTRSQSI+MERAK+SKRSSP  N VVAAEPEGMVKRMRRDIKPIHS
Sbjct: 1   MAKKLSIASARDRVVTRSQSISMERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHS 60

Query: 61  CSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLIMLAATSRWFYRLVMED 120
           CSSP SAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSL+MLAATSRWFYRLVMED
Sbjct: 61  CSSPHSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120

Query: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSV 180
           SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSV
Sbjct: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV 180

Query: 181 ALLSERLGSQMKIPKQDSTDKTLESGCCVLHNVKAGIWIADLQLVRCPVCDLNTCDGTMQ 240
           ALLSERLGSQMK+PKQ ST  TLESGCCVLHNVK GIWIADLQLVRCPVCDLNTCDGTMQ
Sbjct: 181 ALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240

Query: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKS 300
           TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHL+DSSTSGILDLKS
Sbjct: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKS 300

Query: 301 WTGNRTDWQPKAMVTLNAVAVNTYLQENEGVHVKYQAMRAGANGEVVSIRISQQLL 355
           WTG+R DWQPKAM+TL+AVAVNTYLQ+NEGVHVKYQAMRAGANGEVVSIRISQQLL
Sbjct: 301 WTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 356

[Close]

BLAST of CcUC06G110580 vs. ExPASy TrEMBL
Match: A0A1S3CBL0 (probable F-box protein At3g61730 OS=Cucumis melo OX=3656 GN=LOC103498945 PE=4 SV=1)

HSP 1 Score: 641.3 bits (1653), Expect = 2.3e-180
Identity = 316/334 (94.61%), Postives = 324/334 (97.01%), Query Frame = 0


Query: 23  MERAKLSKRSSP--NSVVAAEPEGMVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSS 82
           MERAK+SKRSSP  N VVAAEPEGMVKRMRRDIKPIHSCSSP SAFLTAHSSASSSASSS
Sbjct: 1   MERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHSCSSPHSAFLTAHSSASSSASSS 60

Query: 83  SCWYDADVWTEVAKFLDGRSLIMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK 142
           SCWYDADVWTEVAKFLDGRSL+MLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK
Sbjct: 61  SCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK 120

Query: 143 WIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDKT 202
           WIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSVALLSERLGSQMK+PKQ ST  T
Sbjct: 121 WIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPKQGSTANT 180

Query: 203 LESGCCVLHNVKAGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY 262
           LESGCCVLHNVK GIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY
Sbjct: 181 LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY 240

Query: 263 QIVGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGNRTDWQPKAMVTLNAVAVN 322
           QIVGSHDIRKPTESASGAIFDVKHL+DSSTSGILDLKSWTG+R DWQPKAM+TL+AVAVN
Sbjct: 241 QIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMITLSAVAVN 300

Query: 323 TYLQENEGVHVKYQAMRAGANGEVVSIRISQQLL 355
           TYLQ+NEGVHVKYQAMRAGANGEVVSIRISQQLL
Sbjct: 301 TYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 334

[Close]

BLAST of CcUC06G110580 vs. ExPASy TrEMBL
Match: A0A6J1DCT6 (probable F-box protein At3g61730 OS=Momordica charantia OX=3673 GN=LOC111019845 PE=4 SV=1)

HSP 1 Score: 611.7 bits (1576), Expect = 2.0e-171
Identity = 309/357 (86.55%), Postives = 327/357 (91.60%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMERAKLSKRSSPNSVVAAEPEG-MVKRMRRDIKP--IH 60
           MGKKLSI+SARDRVVTRSQS AMER +LSKRS    + AAEPEG M KR+RRD+K   IH
Sbjct: 1   MGKKLSISSARDRVVTRSQSSAMERERLSKRS---PIAAAEPEGVMAKRIRRDVKHPIIH 60

Query: 61  SCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLIMLAATSRWFYRLVME 120
            CSSPRSAFLT        ASSSSCWYDADVWTEVAKFLDGRSL+MLAATSRWFYRLVME
Sbjct: 61  PCSSPRSAFLT--------ASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVME 120

Query: 121 DSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSS 180
           DSIWKYVCLRDLQV APQ TAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF +DSS
Sbjct: 121 DSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSS 180

Query: 181 VALLSERLGSQMKIPKQDSTDKTLESGCCVLHNVKAGIWIADLQLVRCPVCDLNTCDGTM 240
           VALLSERLGSQ+KIPKQDS D  LESGCCVLHNVK GIWIADLQLVRCPVCDLNTCDGTM
Sbjct: 181 VALLSERLGSQVKIPKQDSKDNMLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTM 240

Query: 241 QTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLK 300
           QTLDARHIELFLNEGYQDGSW+YQIVGSHDIRKPTE+ASGAIFDVKHL+DSSTSGILD++
Sbjct: 241 QTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQ 300

Query: 301 SWTGNRTDWQPKAMVTLNAVAVNTYLQENEGVHVKYQAMRAGANGEVVSIRISQQLL 355
           +W+G RTDWQPKAM+TL+AVAVNTYLQ+NEGVHVKYQAMR GANGEVVSIRISQQLL
Sbjct: 301 TWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL 346

[Close]

BLAST of CcUC06G110580 vs. ExPASy TrEMBL
Match: A0A6J1EVC3 (probable F-box protein At3g61730 OS=Cucurbita moschata OX=3662 GN=LOC111436308 PE=4 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 1.0e-151
Identity = 259/271 (95.57%), Postives = 267/271 (98.52%), Query Frame = 0


Query: 84  YDADVWTEVAKFLDGRSLIMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIK 143
           YDADVWTEVAKFLDGRSL+MLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIK
Sbjct: 11  YDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIK 70

Query: 144 LYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDKTLES 203
           LYVSAFDGSHSYIFRQQEKHLDWMRIGAFF+DSSV LLSERLGSQ+KIPKQDS D TLES
Sbjct: 71  LYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLES 130

Query: 204 GCCVLHNVKAGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQIV 263
           GCCVLHNVK GIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQI+
Sbjct: 131 GCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQIL 190

Query: 264 GSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGNRTDWQPKAMVTLNAVAVNTYL 323
           GSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTG+RTDWQPKAM+TLNAVAVNTYL
Sbjct: 191 GSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYL 250

Query: 324 QENEGVHVKYQAMRAGANGEVVSIRISQQLL 355
           Q+NEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 251 QDNEGVHVKYQAMKAGANGEVVSIRISQQLL 281

[Close]

BLAST of CcUC06G110580 vs. TAIR 10
Match: AT5G36000.1 (BEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G61730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 387.1 bits (993), Expect = 1.5e-107
Identity = 174/303 (57.43%), Postives = 236/303 (77.89%), Query Frame = 0


Query: 53  IKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLIMLAATSRWFY 112
           ++ IH C SPR +  T  S  S        WY+ D+WT + +FLDG+SL+ L AT++WFY
Sbjct: 61  LRGIHGCVSPRCSAPTYQSRFS--------WYEQDIWTYITRFLDGKSLVKLGATNKWFY 120

Query: 113 RLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF 172
           ++ MED++W++ CLRDLQVP     +  WIK+Y SAFDGSHSY+F Q+EKH+DWMR+GAF
Sbjct: 121 KIAMEDTVWRFACLRDLQVPETFPVSSTWIKIYASAFDGSHSYLFHQKEKHIDWMRLGAF 180

Query: 173 FLDSSVALLSERLGSQMKIPKQDSTDKTLE-SGCCVLHNVKAGIWIADLQLVRCPVCDLN 232
            LDS  + L+E L  ++K+P + + ++ L+ SG C+++++K+GIWIADLQL+RCP+CDL+
Sbjct: 181 VLDSRTSFLTESLSGRLKVPTEGTIEQMLQSSGSCLINDIKSGIWIADLQLLRCPLCDLS 240

Query: 233 TCDGTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS 292
           TCDGTMQTLD RHIELFL+EGY+DGSW+Y ++GSH + K   +A GAIFD+KHLK SS+S
Sbjct: 241 TCDGTMQTLDVRHIELFLSEGYKDGSWDYNLIGSHKLEKDASAACGAIFDLKHLKKSSSS 300

Query: 293 GILDLKSWTGNRTDWQPKAMVTLNAVAVNTYLQENEGVHVKYQAMRAGANGEVVSIRISQ 352
           GIL+LKSWTG   D QPKA++  +AVAV+T LQ+NEG+ VKY  M+AG +G++VSIRISQ
Sbjct: 301 GILNLKSWTGEADDSQPKAVIAPHAVAVHTRLQQNEGILVKYHTMKAGTDGDIVSIRISQ 355

Query: 353 QLL 355
           QLL
Sbjct: 361 QLL 355

[Close]

BLAST of CcUC06G110580 vs. TAIR 10
Match: AT3G61730.1 (reduced male fertility )

HSP 1 Score: 380.6 bits (976), Expect = 1.4e-105
Identity = 183/340 (53.82%), Postives = 249/340 (73.24%), Query Frame = 0


Query: 25  RAKLSKRSSPNSVVAAEPEGMVKRM---------RRDIKPIHSCSSPRSAFLTAHSSASS 84
           + KL + +   + +  E +G  KR           + ++ I  C SPR +  T  S  S 
Sbjct: 28  KRKLVQSNEQKNDIQREEDGRAKRRIVQSSDQKNGKILRGIRGCVSPRCSAQTYQSRFS- 87

Query: 85  SASSSSCWYDADVWTEVAKFLDGRSLIMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQ 144
                  WY+ D+WT +++FLDG+SL+ L AT++WFY++ MED++W++ CLRDLQVP P 
Sbjct: 88  -------WYEQDIWTYISRFLDGKSLVKLGATNKWFYKIAMEDTVWRFACLRDLQVPVPF 147

Query: 145 HTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQD 204
             +  WIK+Y SAFDGSHSY+FRQ+EKH     IGAF LDS  +LL+E L  ++K P++ 
Sbjct: 148 PVSSTWIKIYASAFDGSHSYLFRQKEKH-----IGAFVLDSRTSLLTESLSGRLKFPREG 207

Query: 205 STDKTLE-SGCCVLHNVKAGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQ 264
           + ++ L+ SG C+++++K+GIWIADLQLVRCPVCDL+TCDGTMQTLDARHIELFL+EGY+
Sbjct: 208 TIERMLQSSGSCLINDIKSGIWIADLQLVRCPVCDLSTCDGTMQTLDARHIELFLSEGYK 267

Query: 265 DGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGNRTDWQPKAMVTL 324
           DGSW+Y ++GSH ++K   +A GAIFD+KHLK+SS SGIL+LKSWTG   D QPKA++  
Sbjct: 268 DGSWDYNLIGSHKLQKNASAACGAIFDLKHLKESSYSGILNLKSWTGESNDSQPKAVIAP 327

Query: 325 NAVAVNTYLQENEGVHVKYQAMRAGANGEVVSIRISQQLL 355
           +AVAV+T LQENEG+ VKY  M+AG +G++VSIRISQQLL
Sbjct: 328 HAVAVHTRLQENEGILVKYHTMKAGTDGDIVSIRISQQLL 354

[Close]

BLAST of CcUC06G110580 vs. TAIR 10
Match: AT3G62500.1 (BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G61740.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 169.1 bits (427), Expect = 6.4e-42
Identity = 88/168 (52.38%), Postives = 117/168 (69.64%), Query Frame = 0


Query: 165 DWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDKTLESGCCVLHNVKAGIWIADLQLVR 224
           DWM IGAF LDS  +LL+E L  ++K+PK+ + ++ L+                 LQLVR
Sbjct: 178 DWMPIGAFVLDSRTSLLTESLSGRLKVPKEGTIERMLQK---------------YLQLVR 237

Query: 225 CPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKH 284
            PVCDL     TMQTLDARHIELFL+EGY+DGSW+Y ++GSH ++K   +A GAIFD+KH
Sbjct: 238 -PVCDLR----TMQTLDARHIELFLSEGYKDGSWDYNLIGSHKLQKNASAACGAIFDLKH 297

Query: 285 LKDSSTSGILDLKSWTGNRTDWQPKAMVTLNAVAVNTYLQENEGVHVK 333
            K+SS+SGIL+LKSWTG     QPKA++  +AVAV+T L+ENE   ++
Sbjct: 298 HKESSSSGILNLKSWTGQPDISQPKAVIAPHAVAVHTRLRENEVAEIQ 325

The following BLAST results are available for this feature:

BLAST of CcUC06G110580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875515.1	1.2e-196	97.46	probable F-box protein At3g61730 [Benincasa hispida]	[more]
XP_004140675.1	9.9e-194	96.06	probable F-box protein At3g61730 [Cucumis sativus] >KGN46347.1 hypothetical prot...	[more]
XP_023548391.1	3.5e-191	94.63	probable F-box protein At3g61730 [Cucurbita pepo subsp. pepo]	[more]
TYK24589.1	5.1e-190	94.38	putative F-box protein [Cucumis melo var. makuwa]	[more]
XP_008459999.1	4.8e-180	94.61	PREDICTED: probable F-box protein At3g61730 [Cucumis melo]	[more]

BLAST of CcUC06G110580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M365	1.2e-109	55.00	Probable F-box protein At3g61730 OS=Arabidopsis thaliana OX=3702 GN=RMF PE=1 SV=...	[more]
Q9FGB8	2.1e-106	57.43	Probable F-box protein At5g36000 OS=Arabidopsis thaliana OX=3702 GN=At5g36000 PE...	[more]

BLAST of CcUC06G110580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KD88	4.8e-194	96.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087760 PE=4 SV=1	[more]
A0A5D3DMQ8	2.5e-190	94.38	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3CBL0	2.3e-180	94.61	probable F-box protein At3g61730 OS=Cucumis melo OX=3656 GN=LOC103498945 PE=4 SV...	[more]
A0A6J1DCT6	2.0e-171	86.55	probable F-box protein At3g61730 OS=Momordica charantia OX=3673 GN=LOC111019845 ...	[more]
A0A6J1EVC3	1.0e-151	95.57	probable F-box protein At3g61730 OS=Cucurbita moschata OX=3662 GN=LOC111436308 P...	[more]

BLAST of CcUC06G110580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G36000.1	1.5e-107	57.43	BEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G617...	[more]
AT3G61730.1	1.4e-105	53.82	reduced male fertility	[more]
AT3G62500.1	6.4e-42	52.38	BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G6174...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1280.50		coord: 80..164 e-value: 6.5E-6 score: 28.0
None	No IPR available	PANTHER	PTHR47149	F-BOX PROTEIN RMF	coord: 22..354
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 87..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G110580.1	CcUC06G110580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034968	histone lysine methylation
biological_process	GO:0061458	reproductive system development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0018024	histone-lysine N-methyltransferase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding