CcUC06G110530 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G110530
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	ABC transporter F family member 4-like
Location	CicolChr06: 1070772 .. 1071326 (-)
RNA-Seq Expression	CcUC06G110530
Synteny	CcUC06G110530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGGAAGAAGACAGAAGAAGGTGGTGGAAATGCCAAAGTCAAGCCTGGTAAAGATGTTTCCGGGAAGAGGGAGAAGCTTTCCGTGTCAGAAATGCTTGCCAGTATGGATCAGAAACCAGATAAACCGAGAAAGGGATCTTCATCTTTGAGCAGTGGTGCTAAACCTCAAGCAAAAGCTGCAAAAAAAGTTTCATCTTACACTGATGGCATTGATCTCCCTCCCTCAGATGATGAGGAAGAAGAAACTGTTTCTGAAGAGGAGCAACAAAGTAACAGTTCCCAGAAACGGCTACCCTGGCAGGACAGGGCTGAAGTGAAGCCTCTGGAGATTGCTGTAAGTGACAAAGAGTTAAAAAAACGAGGGAGAAAAGATATGTTTGTTGCCCATGCTGCCGAACAGGCCAGACAGGAAGCTCTAAAAGATGACCATGATGCTTTCACTGTTGTAATTGGTAGCCGAGCCTCAATTCTTGATGTTAATGATGAGGCTGATGCAAATGTTAAAGACATAACAATTGAGAATTTCTCTGTTTCAGCTAGAGGGAAATAG

mRNA sequence

ATGGGAAGGAAGAAGACAGAAGAAGGTGGTGGAAATGCCAAAGTCAAGCCTGGTAAAGATGTTTCCGGGAAGAGGGAGAAGCTTTCCGTGTCAGAAATGCTTGCCAGTATGGATCAGAAACCAGATAAACCGAGAAAGGGATCTTCATCTTTGAGCAGTGGTGCTAAACCTCAAGCAAAAGCTGCAAAAAAAGTTTCATCTTACACTGATGGCATTGATCTCCCTCCCTCAGATGATGAGGAAGAAGAAACTGTTTCTGAAGAGGAGCAACAAAGTAACAGTTCCCAGAAACGGCTACCCTGGCAGGACAGGGCTGAAGTGAAGCCTCTGGAGATTGCTGTAAGTGACAAAGAGTTAAAAAAACGAGGGAGAAAAGATATGTTTGTTGCCCATGCTGCCGAACAGGCCAGACAGGAAGCTCTAAAAGATGACCATGATGCTTTCACTGTTGTAATTGGTAGCCGAGCCTCAATTCTTGATGTTAATGATGAGGCTGATGCAAATGTTAAAGACATAACAATTGAGAATTTCTCTGTTTCAGCTAGAGGGAAATAG

Coding sequence (CDS)

ATGGGAAGGAAGAAGACAGAAGAAGGTGGTGGAAATGCCAAAGTCAAGCCTGGTAAAGATGTTTCCGGGAAGAGGGAGAAGCTTTCCGTGTCAGAAATGCTTGCCAGTATGGATCAGAAACCAGATAAACCGAGAAAGGGATCTTCATCTTTGAGCAGTGGTGCTAAACCTCAAGCAAAAGCTGCAAAAAAAGTTTCATCTTACACTGATGGCATTGATCTCCCTCCCTCAGATGATGAGGAAGAAGAAACTGTTTCTGAAGAGGAGCAACAAAGTAACAGTTCCCAGAAACGGCTACCCTGGCAGGACAGGGCTGAAGTGAAGCCTCTGGAGATTGCTGTAAGTGACAAAGAGTTAAAAAAACGAGGGAGAAAAGATATGTTTGTTGCCCATGCTGCCGAACAGGCCAGACAGGAAGCTCTAAAAGATGACCATGATGCTTTCACTGTTGTAATTGGTAGCCGAGCCTCAATTCTTGATGTTAATGATGAGGCTGATGCAAATGTTAAAGACATAACAATTGAGAATTTCTCTGTTTCAGCTAGAGGGAAATAG

Protein sequence

MGRKKTEEGGGNAKVKPGKDVSGKREKLSVSEMLASMDQKPDKPRKGSSSLSSGAKPQAKAAKKVSSYTDGIDLPPSDDEEEETVSEEEQQSNSSQKRLPWQDRAEVKPLEIAVSDKELKKRGRKDMFVAHAAEQARQEALKDDHDAFTVVIGSRASILDVNDEADANVKDITIENFSVSARGK

Homology

[Close]

BLAST of CcUC06G110530 vs. NCBI nr
Match: XP_022950736.1 (ABC transporter F family member 4-like [Cucurbita moschata] >XP_022950737.1 ABC transporter F family member 4-like [Cucurbita moschata] >KAG7033624.1 ABC transporter F family member 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 308.5 bits (789), Expect = 3.8e-80
Identity = 167/184 (90.76%), Postives = 173/184 (94.02%), Query Frame = 0


Query: 1   MGRKKTEEGGGNAKVKPGKDVSGKREKLSVSEMLASMDQKPDKPRKGSSSLSSGAKPQAK 60
           MGRKK+EEGGGNAKVKPGKD SGKREKLSVSEMLASMDQK DKPRKGSSSLS GAKPQAK
Sbjct: 1   MGRKKSEEGGGNAKVKPGKDASGKREKLSVSEMLASMDQKSDKPRKGSSSLSGGAKPQAK 60

Query: 61  AAKKVSSYTDGIDLPPSDDEEEETVSEEEQQSNSSQKRLPWQDRAEVKPLEIAVSDKELK 120
           A KKV+SYTDGIDLPPSDDEEEE VS+EEQQS SSQKRLPWQDRAE KPLE+AVSDKELK
Sbjct: 61  APKKVASYTDGIDLPPSDDEEEEIVSDEEQQSTSSQKRLPWQDRAETKPLEVAVSDKELK 120

Query: 121 KRGRKDMFVAHAAEQARQEALKDDHDAFTVVIGSRASILDVNDEADANVKDITIENFSVS 180
           KR RKDMF AHA EQARQEALKDDHDAFTVVIGSRAS+LD NDEADANVKDITI+NFSVS
Sbjct: 121 KRERKDMFAAHAVEQARQEALKDDHDAFTVVIGSRASVLDGNDEADANVKDITIDNFSVS 180

Query: 181 ARGK 185
           ARGK
Sbjct: 181 ARGK 184

[Close]

BLAST of CcUC06G110530 vs. NCBI nr
Match: XP_023543438.1 (ABC transporter F family member 4-like [Cucurbita pepo subsp. pepo] >XP_023543439.1 ABC transporter F family member 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.5 bits (789), Expect = 3.8e-80
Identity = 167/184 (90.76%), Postives = 173/184 (94.02%), Query Frame = 0


Query: 1   MGRKKTEEGGGNAKVKPGKDVSGKREKLSVSEMLASMDQKPDKPRKGSSSLSSGAKPQAK 60
           MGRKK+EEGGGNAKVKPGKD SGKREKLSVSEMLASMDQK DKPRKGSSSLS GAKPQAK
Sbjct: 1   MGRKKSEEGGGNAKVKPGKDASGKREKLSVSEMLASMDQKSDKPRKGSSSLSGGAKPQAK 60

Query: 61  AAKKVSSYTDGIDLPPSDDEEEETVSEEEQQSNSSQKRLPWQDRAEVKPLEIAVSDKELK 120
           A KKV+SYTDGIDLPPSDDEEEE VS+EEQQS SSQKRLPWQDRAE KPLE+AVSDKELK
Sbjct: 61  APKKVASYTDGIDLPPSDDEEEEIVSDEEQQSTSSQKRLPWQDRAETKPLEVAVSDKELK 120

Query: 121 KRGRKDMFVAHAAEQARQEALKDDHDAFTVVIGSRASILDVNDEADANVKDITIENFSVS 180
           KR RKDMF AHA EQARQEALKDDHDAFTVVIGSRAS+LD NDEADANVKDITI+NFSVS
Sbjct: 121 KRERKDMFAAHAVEQARQEALKDDHDAFTVVIGSRASVLDGNDEADANVKDITIDNFSVS 180

Query: 181 ARGK 185
           ARGK
Sbjct: 181 ARGK 184

[Close]

BLAST of CcUC06G110530 vs. NCBI nr
Match: XP_008462810.1 (PREDICTED: ABC transporter F family member 4-like [Cucumis melo] >XP_008462811.1 PREDICTED: ABC transporter F family member 4-like [Cucumis melo] >KAA0066330.1 ABC transporter F family member 4-like [Cucumis melo var. makuwa] >TYK00949.1 ABC transporter F family member 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 308.1 bits (788), Expect = 5.0e-80
Identity = 167/184 (90.76%), Postives = 174/184 (94.57%), Query Frame = 0


Query: 1   MGRKKTEEGGGNAKVKPGKDVSGKREKLSVSEMLASMDQKPDKPRKGSSSLSSGAKPQAK 60
           MGRKKTEEGGGNAKVKPGKDVSGKREKLSVSEMLASMDQK DKPRKGSSSL  GAKPQAK
Sbjct: 1   MGRKKTEEGGGNAKVKPGKDVSGKREKLSVSEMLASMDQKSDKPRKGSSSLGGGAKPQAK 60

Query: 61  AAKKVSSYTDGIDLPPSDDEEEETVSEEEQQSNSSQKRLPWQDRAEVKPLEIAVSDKELK 120
           A KKV++YTDGIDLPPSDDEEEE VS+ EQQS SSQKRLPWQDRAE+KPLE+AVSDKELK
Sbjct: 61  APKKVAAYTDGIDLPPSDDEEEEIVSDGEQQSTSSQKRLPWQDRAELKPLEVAVSDKELK 120

Query: 121 KRGRKDMFVAHAAEQARQEALKDDHDAFTVVIGSRASILDVNDEADANVKDITIENFSVS 180
           KR RKDMF AHAAEQARQEALKDDHDAFTVVIGSRAS+LD NDEADANVKDITI+NFSVS
Sbjct: 121 KRERKDMFAAHAAEQARQEALKDDHDAFTVVIGSRASVLDGNDEADANVKDITIDNFSVS 180

Query: 181 ARGK 185
           ARGK
Sbjct: 181 ARGK 184

[Close]

BLAST of CcUC06G110530 vs. NCBI nr
Match: XP_004151853.3 (ABC transporter F family member 4 [Cucumis sativus] >XP_011650048.2 ABC transporter F family member 4 [Cucumis sativus] >XP_031736813.1 ABC transporter F family member 4 [Cucumis sativus] >KAE8652333.1 hypothetical protein Csa_022120 [Cucumis sativus])

HSP 1 Score: 308.1 bits (788), Expect = 5.0e-80
Identity = 167/184 (90.76%), Postives = 174/184 (94.57%), Query Frame = 0


Query: 1   MGRKKTEEGGGNAKVKPGKDVSGKREKLSVSEMLASMDQKPDKPRKGSSSLSSGAKPQAK 60
           MGRKKTEEGGGNAKVKPGKDVSGKREKLSVSEMLASMDQK DKPRKGSSSL  GAKPQAK
Sbjct: 1   MGRKKTEEGGGNAKVKPGKDVSGKREKLSVSEMLASMDQKSDKPRKGSSSLGGGAKPQAK 60

Query: 61  AAKKVSSYTDGIDLPPSDDEEEETVSEEEQQSNSSQKRLPWQDRAEVKPLEIAVSDKELK 120
           A KKV++YTDGIDLPPSDDEEEE VS+ EQQS SSQKRLPWQDRAE+KPLE+AVSDKELK
Sbjct: 61  APKKVAAYTDGIDLPPSDDEEEEIVSDGEQQSTSSQKRLPWQDRAELKPLEVAVSDKELK 120

Query: 121 KRGRKDMFVAHAAEQARQEALKDDHDAFTVVIGSRASILDVNDEADANVKDITIENFSVS 180
           KR RKDMF AHAAEQARQEALKDDHDAFTVVIGSRAS+LD NDEADANVKDITI+NFSVS
Sbjct: 121 KRERKDMFAAHAAEQARQEALKDDHDAFTVVIGSRASVLDGNDEADANVKDITIDNFSVS 180

Query: 181 ARGK 185
           ARGK
Sbjct: 181 ARGK 184

[Close]

BLAST of CcUC06G110530 vs. NCBI nr
Match: XP_011653838.2 (ABC transporter F family member 4 [Cucumis sativus] >XP_031740087.1 ABC transporter F family member 4 [Cucumis sativus] >XP_031740088.1 ABC transporter F family member 4 [Cucumis sativus] >XP_031740089.1 ABC transporter F family member 4 [Cucumis sativus] >KAE8649655.1 hypothetical protein Csa_012647 [Cucumis sativus])

HSP 1 Score: 307.0 bits (785), Expect = 1.1e-79
Identity = 167/184 (90.76%), Postives = 173/184 (94.02%), Query Frame = 0


Query: 1   MGRKKTEEGGGNAKVKPGKDVSGKREKLSVSEMLASMDQKPDKPRKGSSSLSSGAKPQAK 60
           MGRKKTEEGGGN KVKPGKDVSGKREKLSVSEMLASMDQK DKPRKGSSSLS GAKPQAK
Sbjct: 1   MGRKKTEEGGGNTKVKPGKDVSGKREKLSVSEMLASMDQKSDKPRKGSSSLSGGAKPQAK 60

Query: 61  AAKKVSSYTDGIDLPPSDDEEEETVSEEEQQSNSSQKRLPWQDRAEVKPLEIAVSDKELK 120
           A KKV +YTDGIDLPPSDDEEEE VS+ EQQS SSQKRLPWQDRAE+KPLE+AVSDKELK
Sbjct: 61  APKKVVAYTDGIDLPPSDDEEEEIVSDGEQQSTSSQKRLPWQDRAELKPLEVAVSDKELK 120

Query: 121 KRGRKDMFVAHAAEQARQEALKDDHDAFTVVIGSRASILDVNDEADANVKDITIENFSVS 180
           KR RKDMF AHAAEQARQEALKDDHDAFTVVIGSRAS+LD NDEADANVKDITI+NFSVS
Sbjct: 121 KRERKDMFAAHAAEQARQEALKDDHDAFTVVIGSRASVLDGNDEADANVKDITIDNFSVS 180

Query: 181 ARGK 185
           ARGK
Sbjct: 181 ARGK 184

[Close]

BLAST of CcUC06G110530 vs. ExPASy Swiss-Prot
Match: Q9M1H3 (ABC transporter F family member 4 OS=Arabidopsis thaliana OX=3702 GN=ABCF4 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.3e-43
Identity = 110/187 (58.82%), Postives = 137/187 (73.26%), Query Frame = 0


Query: 1   MGRKKTEEGGGNAKVKP-GKDVS--GKREKLSVSEMLASMDQKPDKPRKGSSSLSSGAKP 60
           MG+KK++E     KVKP GKD S   K+EKLSVS MLA MDQK DKP+KGSSS       
Sbjct: 1   MGKKKSDESAATTKVKPSGKDASKDSKKEKLSVSAMLAGMDQKDDKPKKGSSS------- 60

Query: 61  QAKAAKKVSSYTDGIDLPPSDDEEEETVSEEEQQSNSSQKRLPWQDRAEVKPLEIAVSDK 120
           + KAA K +SYTDGIDLPPSD+E++    EEE+Q  + +K      ++E + LEI+V+DK
Sbjct: 61  RTKAAPKSTSYTDGIDLPPSDEEDDGESDEEERQKEARRKL-----KSEQRHLEISVTDK 120

Query: 121 ELKKRGRKDMFVAHAAEQARQEALKDDHDAFTVVIGSRASILDVNDEADANVKDITIENF 180
           E KKR  K+     AAE A++EA+KDDHDAFTVVIGS+ S+L+ +D ADANVKDITIE+F
Sbjct: 121 EQKKREAKERLALQAAESAKREAMKDDHDAFTVVIGSKTSVLEGDDMADANVKDITIESF 175

Query: 181 SVSARGK 185
           SVSARGK
Sbjct: 181 SVSARGK 175

[Close]

BLAST of CcUC06G110530 vs. ExPASy TrEMBL
Match: A0A6J1GFN1 (ABC transporter F family member 4-like OS=Cucurbita moschata OX=3662 GN=LOC111453748 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.8e-80
Identity = 167/184 (90.76%), Postives = 173/184 (94.02%), Query Frame = 0


Query: 1   MGRKKTEEGGGNAKVKPGKDVSGKREKLSVSEMLASMDQKPDKPRKGSSSLSSGAKPQAK 60
           MGRKK+EEGGGNAKVKPGKD SGKREKLSVSEMLASMDQK DKPRKGSSSLS GAKPQAK
Sbjct: 1   MGRKKSEEGGGNAKVKPGKDASGKREKLSVSEMLASMDQKSDKPRKGSSSLSGGAKPQAK 60

Query: 61  AAKKVSSYTDGIDLPPSDDEEEETVSEEEQQSNSSQKRLPWQDRAEVKPLEIAVSDKELK 120
           A KKV+SYTDGIDLPPSDDEEEE VS+EEQQS SSQKRLPWQDRAE KPLE+AVSDKELK
Sbjct: 61  APKKVASYTDGIDLPPSDDEEEEIVSDEEQQSTSSQKRLPWQDRAETKPLEVAVSDKELK 120

Query: 121 KRGRKDMFVAHAAEQARQEALKDDHDAFTVVIGSRASILDVNDEADANVKDITIENFSVS 180
           KR RKDMF AHA EQARQEALKDDHDAFTVVIGSRAS+LD NDEADANVKDITI+NFSVS
Sbjct: 121 KRERKDMFAAHAVEQARQEALKDDHDAFTVVIGSRASVLDGNDEADANVKDITIDNFSVS 180

Query: 181 ARGK 185
           ARGK
Sbjct: 181 ARGK 184

[Close]

BLAST of CcUC06G110530 vs. ExPASy TrEMBL
Match: A0A1S3CJD6 (ABC transporter F family member 4-like OS=Cucumis melo OX=3656 GN=LOC103501091 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.4e-80
Identity = 167/184 (90.76%), Postives = 174/184 (94.57%), Query Frame = 0


Query: 1   MGRKKTEEGGGNAKVKPGKDVSGKREKLSVSEMLASMDQKPDKPRKGSSSLSSGAKPQAK 60
           MGRKKTEEGGGNAKVKPGKDVSGKREKLSVSEMLASMDQK DKPRKGSSSL  GAKPQAK
Sbjct: 1   MGRKKTEEGGGNAKVKPGKDVSGKREKLSVSEMLASMDQKSDKPRKGSSSLGGGAKPQAK 60

Query: 61  AAKKVSSYTDGIDLPPSDDEEEETVSEEEQQSNSSQKRLPWQDRAEVKPLEIAVSDKELK 120
           A KKV++YTDGIDLPPSDDEEEE VS+ EQQS SSQKRLPWQDRAE+KPLE+AVSDKELK
Sbjct: 61  APKKVAAYTDGIDLPPSDDEEEEIVSDGEQQSTSSQKRLPWQDRAELKPLEVAVSDKELK 120

Query: 121 KRGRKDMFVAHAAEQARQEALKDDHDAFTVVIGSRASILDVNDEADANVKDITIENFSVS 180
           KR RKDMF AHAAEQARQEALKDDHDAFTVVIGSRAS+LD NDEADANVKDITI+NFSVS
Sbjct: 121 KRERKDMFAAHAAEQARQEALKDDHDAFTVVIGSRASVLDGNDEADANVKDITIDNFSVS 180

Query: 181 ARGK 185
           ARGK
Sbjct: 181 ARGK 184

[Close]

BLAST of CcUC06G110530 vs. ExPASy TrEMBL
Match: A0A5A7VGP5 (ABC transporter F family member 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001250 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.4e-80
Identity = 167/184 (90.76%), Postives = 174/184 (94.57%), Query Frame = 0


Query: 1   MGRKKTEEGGGNAKVKPGKDVSGKREKLSVSEMLASMDQKPDKPRKGSSSLSSGAKPQAK 60
           MGRKKTEEGGGNAKVKPGKDVSGKREKLSVSEMLASMDQK DKPRKGSSSL  GAKPQAK
Sbjct: 1   MGRKKTEEGGGNAKVKPGKDVSGKREKLSVSEMLASMDQKSDKPRKGSSSLGGGAKPQAK 60

Query: 61  AAKKVSSYTDGIDLPPSDDEEEETVSEEEQQSNSSQKRLPWQDRAEVKPLEIAVSDKELK 120
           A KKV++YTDGIDLPPSDDEEEE VS+ EQQS SSQKRLPWQDRAE+KPLE+AVSDKELK
Sbjct: 61  APKKVAAYTDGIDLPPSDDEEEEIVSDGEQQSTSSQKRLPWQDRAELKPLEVAVSDKELK 120

Query: 121 KRGRKDMFVAHAAEQARQEALKDDHDAFTVVIGSRASILDVNDEADANVKDITIENFSVS 180
           KR RKDMF AHAAEQARQEALKDDHDAFTVVIGSRAS+LD NDEADANVKDITI+NFSVS
Sbjct: 121 KRERKDMFAAHAAEQARQEALKDDHDAFTVVIGSRASVLDGNDEADANVKDITIDNFSVS 180

Query: 181 ARGK 185
           ARGK
Sbjct: 181 ARGK 184

[Close]

BLAST of CcUC06G110530 vs. ExPASy TrEMBL
Match: A0A0A0LNE5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G431120 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.4e-80
Identity = 167/184 (90.76%), Postives = 174/184 (94.57%), Query Frame = 0


Query: 1   MGRKKTEEGGGNAKVKPGKDVSGKREKLSVSEMLASMDQKPDKPRKGSSSLSSGAKPQAK 60
           MGRKKTEEGGGNAKVKPGKDVSGKREKLSVSEMLASMDQK DKPRKGSSSL  GAKPQAK
Sbjct: 1   MGRKKTEEGGGNAKVKPGKDVSGKREKLSVSEMLASMDQKSDKPRKGSSSLGGGAKPQAK 60

Query: 61  AAKKVSSYTDGIDLPPSDDEEEETVSEEEQQSNSSQKRLPWQDRAEVKPLEIAVSDKELK 120
           A KKV++YTDGIDLPPSDDEEEE VS+ EQQS SSQKRLPWQDRAE+KPLE+AVSDKELK
Sbjct: 61  APKKVAAYTDGIDLPPSDDEEEEIVSDGEQQSTSSQKRLPWQDRAELKPLEVAVSDKELK 120

Query: 121 KRGRKDMFVAHAAEQARQEALKDDHDAFTVVIGSRASILDVNDEADANVKDITIENFSVS 180
           KR RKDMF AHAAEQARQEALKDDHDAFTVVIGSRAS+LD NDEADANVKDITI+NFSVS
Sbjct: 121 KRERKDMFAAHAAEQARQEALKDDHDAFTVVIGSRASVLDGNDEADANVKDITIDNFSVS 180

Query: 181 ARGK 185
           ARGK
Sbjct: 181 ARGK 184

[Close]

BLAST of CcUC06G110530 vs. ExPASy TrEMBL
Match: A0A6J1DVG6 (ABC transporter F family member 4-like OS=Momordica charantia OX=3673 GN=LOC111024749 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.6e-79
Identity = 165/184 (89.67%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MGRKKTEEGGGNAKVKPGKDVSGKREKLSVSEMLASMDQKPDKPRKGSSSLSSGAKPQAK 60
           MGRKKTEEGGGNAKVKPGKDVSGKREKLSVSEMLA+MDQK DKP+KGSSSLS GAKPQAK
Sbjct: 1   MGRKKTEEGGGNAKVKPGKDVSGKREKLSVSEMLANMDQKSDKPKKGSSSLSGGAKPQAK 60

Query: 61  AAKKVSSYTDGIDLPPSDDEEEETVSEEEQQSNSSQKRLPWQDRAEVKPLEIAVSDKELK 120
           A KKV+SYTD IDLPPSDDEEEE VS+EEQQS+SSQK+LPWQDRA+VKPLE+AVSDKELK
Sbjct: 61  APKKVASYTDDIDLPPSDDEEEEIVSDEEQQSSSSQKQLPWQDRADVKPLEVAVSDKELK 120

Query: 121 KRGRKDMFVAHAAEQARQEALKDDHDAFTVVIGSRASILDVNDEADANVKDITIENFSVS 180
           KR RKDMF AHAAEQARQEALKDDHDAFTVVIGSRA ++D NDEADANVKDITIENFSVS
Sbjct: 121 KRERKDMFAAHAAEQARQEALKDDHDAFTVVIGSRALVIDGNDEADANVKDITIENFSVS 180

Query: 181 ARGK 185
           ARGK
Sbjct: 181 ARGK 184

[Close]

BLAST of CcUC06G110530 vs. TAIR 10
Match: AT3G54540.1 (general control non-repressible 4 )

HSP 1 Score: 176.8 bits (447), Expect = 1.6e-44
Identity = 110/187 (58.82%), Postives = 137/187 (73.26%), Query Frame = 0


Query: 1   MGRKKTEEGGGNAKVKP-GKDVS--GKREKLSVSEMLASMDQKPDKPRKGSSSLSSGAKP 60
           MG+KK++E     KVKP GKD S   K+EKLSVS MLA MDQK DKP+KGSSS       
Sbjct: 1   MGKKKSDESAATTKVKPSGKDASKDSKKEKLSVSAMLAGMDQKDDKPKKGSSS------- 60

Query: 61  QAKAAKKVSSYTDGIDLPPSDDEEEETVSEEEQQSNSSQKRLPWQDRAEVKPLEIAVSDK 120
           + KAA K +SYTDGIDLPPSD+E++    EEE+Q  + +K      ++E + LEI+V+DK
Sbjct: 61  RTKAAPKSTSYTDGIDLPPSDEEDDGESDEEERQKEARRKL-----KSEQRHLEISVTDK 120

Query: 121 ELKKRGRKDMFVAHAAEQARQEALKDDHDAFTVVIGSRASILDVNDEADANVKDITIENF 180
           E KKR  K+     AAE A++EA+KDDHDAFTVVIGS+ S+L+ +D ADANVKDITIE+F
Sbjct: 121 EQKKREAKERLALQAAESAKREAMKDDHDAFTVVIGSKTSVLEGDDMADANVKDITIESF 175

Query: 181 SVSARGK 185
           SVSARGK
Sbjct: 181 SVSARGK 175

The following BLAST results are available for this feature:

BLAST of CcUC06G110530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950736.1	3.8e-80	90.76	ABC transporter F family member 4-like [Cucurbita moschata] >XP_022950737.1 ABC ...	[more]
XP_023543438.1	3.8e-80	90.76	ABC transporter F family member 4-like [Cucurbita pepo subsp. pepo] >XP_02354343...	[more]
XP_008462810.1	5.0e-80	90.76	PREDICTED: ABC transporter F family member 4-like [Cucumis melo] >XP_008462811.1...	[more]
XP_004151853.3	5.0e-80	90.76	ABC transporter F family member 4 [Cucumis sativus] >XP_011650048.2 ABC transpor...	[more]
XP_011653838.2	1.1e-79	90.76	ABC transporter F family member 4 [Cucumis sativus] >XP_031740087.1 ABC transpor...	[more]

BLAST of CcUC06G110530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1H3	2.3e-43	58.82	ABC transporter F family member 4 OS=Arabidopsis thaliana OX=3702 GN=ABCF4 PE=2 ...	[more]

BLAST of CcUC06G110530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GFN1	1.8e-80	90.76	ABC transporter F family member 4-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A1S3CJD6	2.4e-80	90.76	ABC transporter F family member 4-like OS=Cucumis melo OX=3656 GN=LOC103501091 P...	[more]
A0A5A7VGP5	2.4e-80	90.76	ABC transporter F family member 4-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0LNE5	2.4e-80	90.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G431120 PE=4 SV=1	[more]
A0A6J1DVG6	1.6e-79	89.67	ABC transporter F family member 4-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of CcUC06G110530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54540.1	1.6e-44	58.82	general control non-repressible 4	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR19211:SF120	SUBFAMILY NOT NAMED	coord: 10..184
None	No IPR available	PANTHER	PTHR19211	ATP-BINDING TRANSPORT PROTEIN-RELATED	coord: 10..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G110530.1	CcUC06G110530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding