CcUC06G110450 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G110450
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Trigger_N domain-containing protein
Location	CicolChr06: 984932 .. 987462 (+)
RNA-Seq Expression	CcUC06G110450
Synteny	CcUC06G110450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTAATTAAATTTTAAGAATCAATTTTGTTAATGGTATGAAATTACGAAAGAAGGGGGAAAAACCTACTCCAAATGAGACTCTCCAATTGGATATAAAAGAAGCATGGGGAAAGAGATGAGAGAATTCACACTAAGAAATTGTCGTAAAAGCGATAGAAGAAAGCCCTTGTAAAGTGCATCCATAAGAGCTCTTTTTCTTAGTTGAAAGGATGACCCCCAAAAACATACTAGAGGAGGAGGAGGAGATTTTGAGGGAGAGCTGTATGTCGACCACCCAAAGCATGATAGCTGCCCCCACAATTTTGATGCAAATTTGCAGGACACAGAAAGACCTTGAGACTTAGGAGCTGTCTATGCGCATGACACAAACTACTAGCCTTTGTTCAAGAAAATAATGCATCCTTGAGATACCACTGTCTCAATATCTAATCGCTCACTCTCCCAATGCCACCTCACTTAGTTACAACTTCTGCCCACCAAAGTTGACAAACAATCTATTCTCAATGTAAGATTTTGTTAGGAATGTTAGCAGGGAACTATTTGGGATATTATTAGGTTATTTGGAGGGCATAGTTTGTTAGAAAAGAGATTATAAACGCAGTTGAATAGAGGGGTTTGAGATAGGCAGAGGTTAGACATTTTGGGAGAGTCCACGCCTCTCAAAGTGTTTGGTTTTCGTAAATTTTCTATTATATGGGAATACAATTTAAGTGTTATTTTCGTACTTCCATTTTCAATCAAGATTGGGTTCCTATCATCCTTCCCTTTATCATCCTTCCCTTTCATGTTTTCTTTGGAACGCATTTATTGTTAGTGACCTATAAAAAATGTCTAATGAAATATTATTGACAGCTAAGAGTGGATTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAACTTAGCCCGTTCAGCACCACCAATGCCAGGATTTCGTAGGCAAAAAGGAGGTAGTACCACGATTTTCCTCCTCTTCCACCTCGAATGTTACAACCATTCATTCATTTGCAACATAAGTCTTGTACATGTTCACTATCCATGTAGACAAATATGGGAATTGAGAAGTGCCTTTCCTGTCCATATGCGTTCATATGTTTAGCTGCTTTTACAGCTTATAAGTTCTTCTTGTAGCAGATGACTTGACTTTATATGGTTTCTAATGTTTTCCTGTCTTCATGCCCGTGGATGCTTTGCCAGGGAAAACATCAAATGTGAGTTGCTTCTCTTTGCTTTTTATACTTTACCCTTTTGGTTTCCAAAAATTTTCAAATTCGTTGTTTAGTTCTAACTCATTGAATATATGCCTTGTCATCTTTGATAATATTCCCAAGTTTTGGTATTTTTATTTGTAACGATTTAGTTTTGATGTTTTATGTGAACACATTTGAGTCATCGAGTTACAAATCTTATTATGAAGTTGATTGGAAAATAATCTGTTCATGAAATATGGGCAAGTTATAAGAGCTGCTTCTCGCACTTTAGCCTCGAACATTTGTTTTTTGATTTGGTTAAATTTGATTTCGCTCATGATTCATTTTTTCTCAGTATCCTTATTCATTTTTTGGCATGTTATGCGGGGATTTACATCCTAGTTACAAATAGTATTCTATTCTTCCACAAGGTTTTTATTTCTCAATAATTAATTCCTCCAGGTCCCAAAAAGCTTCCTCTTAGAAGTCCTTGGTAAGGACCGAGTCACGAAGTTTGTCATACAAGAAATATTGAACTCAACTATGGCAGATTATGCAAAGAAGGCAAGTTTTATCCTCATTGCTTTGCTTCTTATACCTAGTGCCTACGTGGTGATTGTAACTTGGAGATGTTTTTAAATTGGTTTTTCTAAATAGCTTGTAGAAGTCAATGATATTTGGGTAAATAAAATCACTATCCATGAACAACAGACCATTTCAAAAGATATAACAAATTTTACGAATAGACAAATGTCTTGTTAATTTGGCTTGACGTGGCTAACAAATGATGGATGGAAAGAAGTTAACAGCTGGATAAAATAGGAGTGACATGGTTTATGGATTGATTTGATATATTACTTCAAAGTAAATGATATGTTTCATGTGTTGCCTTCTTTTGTTAAAGTTGTCCATTTGCCTTCTCTATTATTTGTCTAGTTGTGCCCAATCAACTGGTGTCTATCTAATTAGAGCATATGATGTTACCATCTAGTAAATTGTATTGATGTTTGAAAATAGATATACTATAATAAAACCATTCAAAATTTAAATAACTAGTTGATTTTTTTTAAGTTCGAAGACTGAACGGACATGGTTCACAATTAAATTTGTAATTTATCCAAATGTGATTATCCAAATATCAAAAACATAAGCTCTTTTTTTTTTCTTTTTTCTTTGGACTCCAATACAGGAAAACATAAATGTAAAGGACAAGAAGGTTAACACAACACAAACAGCAGATGAACTGAAAGTATTGTTTAGTCCAGGAAAAGATTTTGGTTTCAATGCCATACTTGAACTTGAATCTGGTTCAGATGGTGAAAATTGA

mRNA sequence

TTTTTAATTAAATTTTAAGAATCAATTTTGTTAATGGTATGAAATTACGAAAGAAGGGGGAAAAACCTACTCCAAATGAGACTCTCCAATTGGATATAAAAGAAGCATGGGGAAAGAGATGAGAGAATTCACACTAAGAAATTGTCGTAAAAGCGATAGAAGAAAGCCCTTGTAAAGTGCATCCATAAGAGCTCTTTTTCTTAGTTGAAAGGATGACCCCCAAAAACATACTAGAGGAGGAGGAGGAGATTTTGAGGGAGAGCTGTATGTCGACCACCCAAAGCATGATAGCTGCCCCCACAATTTTGATGCAAATTTGCAGGACACAGAAAGACCTTGAGACTTAGGAGCTGTCTATGCGCATGACACAAACTACTAGCCTTTGTTCAAGAAAATAATGCATCCTTGAGATACCACTGTCTCAATATCTAATCGCTCACTCTCCCAATGCCACCTCACTTAGTTACAACTTCTGCCCACCAAAGTTGACAAACAATCTATTCTCAATGTAAGATTTTGTTAGGAATGTTAGCAGGGAACTATTTGGGATATTATTAGGTTATTTGGAGGGCATAGTTTGTTAGAAAAGAGATTATAAACGCAGTTGAATAGAGGGGTTTGAGATAGGCAGAGGTTAGACATTTTGGGAGAGTCCACGCCTCTCAAAGTGTTTGGTTTTCGTAAATTTTCTATTATATGGGAATACAATTTAAGTGTTATTTTCGTACTTCCATTTTCAATCAAGATTGGGTTCCTATCATCCTTCCCTTTATCATCCTTCCCTTTCATGTTTTCTTTGGAACGCATTTATTGTTAGTGACCTATAAAAAATGTCTAATGAAATATTATTGACAGCTAAGAGTGGATTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAACTTAGCCCGTTCAGCACCACCAATGCCAGGATTTCGTAGGCAAAAAGGAGGTAGTACCACGATTTTCCTCCTCTTCCACCTCGAATGTTACAACCATTCATTCATTTGCAACATAAGTCTTGTACATGTTCACTATCCATGTAGACAAATATGGGAATTGAGAAGTGCCTTTCCTGTCCATATGCGTTCATATGTTTAGCTGCTTTTACAGCTTATAAGTTCTTCTTGTAGCAGATGACTTGACTTTATATGGTTTCTAATGTTTTCCTGTCTTCATGCCCGTGGATGCTTTGCCAGGGAAAACATCAAATGTCCCAAAAAGCTTCCTCTTAGAAGTCCTTGGTAAGGACCGAGTCACGAAGTTTGTCATACAAGAAATATTGAACTCAACTATGGCAGATTATGCAAAGAAGGCAAGTTTTATCCTCATTGCTTTGCTTCTTATACCTAGTGCCTACGTGGAAAACATAAATGTAAAGGACAAGAAGGTTAACACAACACAAACAGCAGATGAACTGAAAGTATTGTTTAGTCCAGGAAAAGATTTTGGTTTCAATGCCATACTTGAACTTGAATCTGGTTCAGATGGTGAAAATTGA

Coding sequence (CDS)

ATGCCCGTGGATGCTTTGCCAGGGAAAACATCAAATGTCCCAAAAAGCTTCCTCTTAGAAGTCCTTGGTAAGGACCGAGTCACGAAGTTTGTCATACAAGAAATATTGAACTCAACTATGGCAGATTATGCAAAGAAGGCAAGTTTTATCCTCATTGCTTTGCTTCTTATACCTAGTGCCTACGTGGAAAACATAAATGTAAAGGACAAGAAGGTTAACACAACACAAACAGCAGATGAACTGAAAGTATTGTTTAGTCCAGGAAAAGATTTTGGTTTCAATGCCATACTTGAACTTGAATCTGGTTCAGATGGTGAAAATTGA

Protein sequence

MPVDALPGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKASFILIALLLIPSAYVENINVKDKKVNTTQTADELKVLFSPGKDFGFNAILELESGSDGEN

Homology

[Close]

BLAST of CcUC06G110450 vs. NCBI nr
Match: XP_038906537.1 (uncharacterized protein LOC120092511 [Benincasa hispida])

HSP 1 Score: 147.9 bits (372), Expect = 5.0e-32
Identity = 80/100 (80.00%), Postives = 81/100 (81.00%), Query Frame = 0


Query: 8   GKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKASFILIALLLIPSAYVENINV 67
           GKTSNVPKSFLLEVLGKDRV KFVIQEILNSTMADYAKK                ENINV
Sbjct: 148 GKTSNVPKSFLLEVLGKDRVIKFVIQEILNSTMADYAKK----------------ENINV 207

Query: 68  KDKKVNTTQTADELKVLFSPGKDFGFNAILELESGSDGEN 108
           KDKKVNTTQTADELKVLFSPGK+FGFNAILELES SD EN
Sbjct: 208 KDKKVNTTQTADELKVLFSPGKEFGFNAILELESASDAEN 231

[Close]

BLAST of CcUC06G110450 vs. NCBI nr
Match: XP_008460020.1 (PREDICTED: uncharacterized protein LOC103498959 [Cucumis melo])

HSP 1 Score: 145.2 bits (365), Expect = 3.2e-31
Identity = 78/100 (78.00%), Postives = 81/100 (81.00%), Query Frame = 0


Query: 8   GKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKASFILIALLLIPSAYVENINV 67
           GKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKK                ENINV
Sbjct: 151 GKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKK----------------ENINV 210

Query: 68  KDKKVNTTQTADELKVLFSPGKDFGFNAILELESGSDGEN 108
           KD KVNTTQTADELKVLF+PGK+FGFNAILELES SD E+
Sbjct: 211 KDNKVNTTQTADELKVLFNPGKEFGFNAILELESASDAES 234

[Close]

BLAST of CcUC06G110450 vs. NCBI nr
Match: XP_011656737.1 (uncharacterized protein LOC101212225 [Cucumis sativus] >KGN46335.1 hypothetical protein Csa_004841 [Cucumis sativus])

HSP 1 Score: 143.3 bits (360), Expect = 1.2e-30
Identity = 76/100 (76.00%), Postives = 81/100 (81.00%), Query Frame = 0


Query: 8   GKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKASFILIALLLIPSAYVENINV 67
           GKTSNVPKSFLLEVLGKDRVTKF+IQEILNSTM DYAKK                ENINV
Sbjct: 150 GKTSNVPKSFLLEVLGKDRVTKFIIQEILNSTMVDYAKK----------------ENINV 209

Query: 68  KDKKVNTTQTADELKVLFSPGKDFGFNAILELESGSDGEN 108
           KDKKV+TTQTADELKVLF+PGK+FGFNAILELES SD E+
Sbjct: 210 KDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES 233

[Close]

BLAST of CcUC06G110450 vs. NCBI nr
Match: XP_022155406.1 (uncharacterized protein LOC111022553 [Momordica charantia])

HSP 1 Score: 137.5 bits (345), Expect = 6.7e-29
Identity = 72/96 (75.00%), Postives = 79/96 (82.29%), Query Frame = 0


Query: 8   GKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKASFILIALLLIPSAYVENINV 67
           GKTSNVPKSFLLEVLG++RVTKFVIQEILNSTMADYAKK                EN+NV
Sbjct: 146 GKTSNVPKSFLLEVLGEERVTKFVIQEILNSTMADYAKK----------------ENVNV 205

Query: 68  KDKKVNTTQTADELKVLFSPGKDFGFNAILELESGS 104
           KDKKVNTTQTADELK+LF+PGK+FGFNAILELES +
Sbjct: 206 KDKKVNTTQTADELKLLFTPGKEFGFNAILELESAN 225

[Close]

BLAST of CcUC06G110450 vs. NCBI nr
Match: XP_023004174.1 (uncharacterized protein LOC111497577 [Cucurbita maxima])

HSP 1 Score: 133.3 bits (334), Expect = 1.3e-27
Identity = 76/106 (71.70%), Postives = 78/106 (73.58%), Query Frame = 0


Query: 8   GKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKASFILIALLLIPSAYVENINV 67
           GKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKK                ENI V
Sbjct: 149 GKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKK----------------ENIKV 208

Query: 68  KDKKVNTTQTADELKVLFSPGKDFGFNAILELE------SGSDGEN 108
           KDK VNTTQT DELKVLF PGK+FGFNAILELE      S S+ EN
Sbjct: 209 KDKMVNTTQTEDELKVLFRPGKEFGFNAILELELEPELDSASEDEN 238

[Close]

BLAST of CcUC06G110450 vs. ExPASy TrEMBL
Match: A0A1S3CBN2 (uncharacterized protein LOC103498959 OS=Cucumis melo OX=3656 GN=LOC103498959 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.6e-31
Identity = 78/100 (78.00%), Postives = 81/100 (81.00%), Query Frame = 0


Query: 8   GKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKASFILIALLLIPSAYVENINV 67
           GKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKK                ENINV
Sbjct: 151 GKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKK----------------ENINV 210

Query: 68  KDKKVNTTQTADELKVLFSPGKDFGFNAILELESGSDGEN 108
           KD KVNTTQTADELKVLF+PGK+FGFNAILELES SD E+
Sbjct: 211 KDNKVNTTQTADELKVLFNPGKEFGFNAILELESASDAES 234

[Close]

BLAST of CcUC06G110450 vs. ExPASy TrEMBL
Match: A0A0A0K988 (Trigger_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G086160 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 5.9e-31
Identity = 76/100 (76.00%), Postives = 81/100 (81.00%), Query Frame = 0


Query: 8   GKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKASFILIALLLIPSAYVENINV 67
           GKTSNVPKSFLLEVLGKDRVTKF+IQEILNSTM DYAKK                ENINV
Sbjct: 150 GKTSNVPKSFLLEVLGKDRVTKFIIQEILNSTMVDYAKK----------------ENINV 209

Query: 68  KDKKVNTTQTADELKVLFSPGKDFGFNAILELESGSDGEN 108
           KDKKV+TTQTADELKVLF+PGK+FGFNAILELES SD E+
Sbjct: 210 KDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES 233

[Close]

BLAST of CcUC06G110450 vs. ExPASy TrEMBL
Match: A0A6J1DRL2 (uncharacterized protein LOC111022553 OS=Momordica charantia OX=3673 GN=LOC111022553 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.3e-29
Identity = 72/96 (75.00%), Postives = 79/96 (82.29%), Query Frame = 0


Query: 8   GKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKASFILIALLLIPSAYVENINV 67
           GKTSNVPKSFLLEVLG++RVTKFVIQEILNSTMADYAKK                EN+NV
Sbjct: 146 GKTSNVPKSFLLEVLGEERVTKFVIQEILNSTMADYAKK----------------ENVNV 205

Query: 68  KDKKVNTTQTADELKVLFSPGKDFGFNAILELESGS 104
           KDKKVNTTQTADELK+LF+PGK+FGFNAILELES +
Sbjct: 206 KDKKVNTTQTADELKLLFTPGKEFGFNAILELESAN 225

[Close]

BLAST of CcUC06G110450 vs. ExPASy TrEMBL
Match: A0A6J1KVH6 (uncharacterized protein LOC111497577 OS=Cucurbita maxima OX=3661 GN=LOC111497577 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 6.2e-28
Identity = 76/106 (71.70%), Postives = 78/106 (73.58%), Query Frame = 0


Query: 8   GKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKASFILIALLLIPSAYVENINV 67
           GKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKK                ENI V
Sbjct: 149 GKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKK----------------ENIKV 208

Query: 68  KDKKVNTTQTADELKVLFSPGKDFGFNAILELE------SGSDGEN 108
           KDK VNTTQT DELKVLF PGK+FGFNAILELE      S S+ EN
Sbjct: 209 KDKMVNTTQTEDELKVLFRPGKEFGFNAILELELEPELDSASEDEN 238

[Close]

BLAST of CcUC06G110450 vs. ExPASy TrEMBL
Match: A0A6J1H8V8 (uncharacterized protein LOC111461115 OS=Cucurbita moschata OX=3662 GN=LOC111461115 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.4e-27
Identity = 75/108 (69.44%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 8   GKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKASFILIALLLIPSAYVENINV 67
           GKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTM DYAKK                ENI V
Sbjct: 145 GKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMVDYAKK----------------ENIKV 204

Query: 68  KDKKVNTTQTADELKVLFSPGKDFGFNAIL--------ELESGSDGEN 108
           KDK VNTTQT DELK LF PGK+FGFNAIL        ELES S+GEN
Sbjct: 205 KDKMVNTTQTEDELKALFRPGKEFGFNAILELELELEPELESASEGEN 236

[Close]

BLAST of CcUC06G110450 vs. TAIR 10
Match: AT2G30695.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 253 Blast hits to 253 proteins in 72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). )

HSP 1 Score: 61.6 bits (148), Expect = 4.4e-10
Identity = 33/96 (34.38%), Postives = 55/96 (57.29%), Query Frame = 0


Query: 8   GKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKASFILIALLLIPSAYVENINV 67
           GKT N+PK  LLE+LG  +V K VI++++NS + DY K+                E++ V
Sbjct: 121 GKTPNIPKDVLLEILGYSKVYKQVIKKLINSAIEDYVKQ----------------EDLKV 180

Query: 68  KDKKVNTTQTADELKVLFSPGKDFGFNAILELESGS 104
             K++   Q+ ++L+  F PG+ F F+A ++L+  S
Sbjct: 181 -GKELTVVQSYEDLEETFEPGESFSFDATIKLQEAS 199

[Close]

BLAST of CcUC06G110450 vs. TAIR 10
Match: AT2G30695.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 61.6 bits (148), Expect = 4.4e-10
Identity = 33/96 (34.38%), Postives = 55/96 (57.29%), Query Frame = 0


Query: 8   GKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKASFILIALLLIPSAYVENINV 67
           GKT N+PK  LLE+LG  +V K VI++++NS + DY K+                E++ V
Sbjct: 121 GKTPNIPKDVLLEILGYSKVYKQVIKKLINSAIEDYVKQ----------------EDLKV 180

Query: 68  KDKKVNTTQTADELKVLFSPGKDFGFNAILELESGS 104
             K++   Q+ ++L+  F PG+ F F+A ++L+  S
Sbjct: 181 -GKELTVVQSYEDLEETFEPGESFSFDATIKLQEAS 199

The following BLAST results are available for this feature:

BLAST of CcUC06G110450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906537.1	5.0e-32	80.00	uncharacterized protein LOC120092511 [Benincasa hispida]	[more]
XP_008460020.1	3.2e-31	78.00	PREDICTED: uncharacterized protein LOC103498959 [Cucumis melo]	[more]
XP_011656737.1	1.2e-30	76.00	uncharacterized protein LOC101212225 [Cucumis sativus] >KGN46335.1 hypothetical ...	[more]
XP_022155406.1	6.7e-29	75.00	uncharacterized protein LOC111022553 [Momordica charantia]	[more]
XP_023004174.1	1.3e-27	71.70	uncharacterized protein LOC111497577 [Cucurbita maxima]	[more]

BLAST of CcUC06G110450 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC06G110450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CBN2	1.6e-31	78.00	uncharacterized protein LOC103498959 OS=Cucumis melo OX=3656 GN=LOC103498959 PE=...	[more]
A0A0A0K988	5.9e-31	76.00	Trigger_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G086160 P...	[more]
A0A6J1DRL2	3.3e-29	75.00	uncharacterized protein LOC111022553 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1KVH6	6.2e-28	71.70	uncharacterized protein LOC111497577 OS=Cucurbita maxima OX=3661 GN=LOC111497577...	[more]
A0A6J1H8V8	1.4e-27	69.44	uncharacterized protein LOC111461115 OS=Cucurbita moschata OX=3662 GN=LOC1114611...	[more]

BLAST of CcUC06G110450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30695.1	4.4e-10	34.38	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein ...	[more]
AT2G30695.2	4.4e-10	34.38	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein ...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036611	Trigger factor ribosome-binding domain superfamily	GENE3D	3.30.70.1050		coord: 7..100 e-value: 6.4E-6 score: 28.4
IPR005215	Trigger factor	PANTHER	PTHR30560	TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE	coord: 63..103 coord: 8..47
None	No IPR available	PANTHER	PTHR30560:SF4	OS01G0894700 PROTEIN	coord: 63..103 coord: 8..47

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G110450.1	CcUC06G110450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061077	chaperone-mediated protein folding
biological_process	GO:0051083	'de novo' cotranslational protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0015031	protein transport
biological_process	GO:0043335	protein unfolding
biological_process	GO:0006457	protein folding
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0044183	protein folding chaperone
molecular_function	GO:0043022	ribosome binding