CcUC06G110300 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTAGCTAATTTTTTAGCGCTCGAAATTCCTCAGCCACAAGCCAATCGAGCTTCACAGCCACACAAATGGCGTCCACTCTTTTCCGCCTTGTTGTCTCCACCATCTTTCTTGATTTTGATTTCCCTAAATCTCAACCCTTATCATCTCACCCTTCTCGACCCTCCTTAATCCTCCGCCATTTACTCCTCTTTCTCTATCCCCTTCTTTCTCCGTTTTTATTCTCAAACACCCACTTTCCCTTCTTCTTCTCTTCCATTTTCTCTTCCATCTCTCCGGCGGTTGTGTTCTAGCGGCGTTAGGAGTTACTGTTTTTCATCAGAAGTTCATGGGTTCGTTGATCTTCGAGTAGGAAAGGGGGGAAGAGGGGTTTCCGGGAATCTATTGAAAATTGGTGTGGTAGTCCAGAAGGAGAAGATGAAAATACAGTGTGATGTTTGTGAGAAAGCTCCTGCTACTGTGATTTGTTGTGCGGATGAAGCGGCGCTTTGTGCGAAATGTGATGTTGAAGTTCATGCTGCGAATAAGCTTGCGAGTAAACACCAGAGGCTTCTTCTTCAGTGTCTCTCCACCAAGCTACCTAAATGCGATATATGCCAAGTAATTACCATCTCTGTTGCTTCACCTTGGTATATTGCTCTTTCATTTGCTAGTTTTGTCGATCTGAGGGTTTTTGTTCTGATATGATGTGTAGAGCTATTAACGATTTCGAGAGTGTGGGTGAGAATCTCAATAAAGTTTACTGAAATCACTACTGAATCCAAAGCTTTAAGTTTACTTGTGAGTTTGAGTTTGAAAGTTAGTAAGAGATTCACCAAATGACTGTCGATGTTAATCTGGACGGAAACAAGGTAGGAGTTGTTACTTTAATTTTAGTAGTCGGGTTTATGCCATATTAAATTTATCTAGTATACTAAAAGATTTGAGCTTATAAATTATGGCGAAGTTGATCTTTTTGTATATAATCTTAACACATGACACGATATAATATCAACACACGTCTAGTCATTTTACTGCGTGGTTACTGTTGGGTAGAGAATCATTTTCCCTGCTATCAGATCGTTTAACTCTCCTTGATTGCCAGCTGATACTATGAAAGTGAATTTAAATTGGCTTCAAGGTCTAGAATTGGTATTTGTTTTGAATAGCCCAGATAAAAATCTGTAATCCACTTCGCTCTTATGATATTTTGATTTACTTTTTGTGTATGGTTTACACTTTCCTTTCTATTTGTGAAATGTTAGACATAGGGAATTCTATAAGAAGTGCTTGCAGCATGATTTGTCAATGCGTTTAACTGTTAAGGTCTCAAATTGATGTAGTTGTCAGTGGTAATGGCAGTTAAAAAACATGGTTGACCAATGTTTGGAAAAAATTATGAAAAGATAGAAGTAAGTTATAAATCCGAGTTCTTAGTTAGATTCCAATAAGTTAATTGTAGAGAGTCAGTATTGAAATATTCTAATTTACCTTGAAGGATGTCCATTTTTTGGTAGAAAGTGGGAAGACTTTTACATGAGATGAAATATGCTGAGTATTCTATGTCTCATTTGTAATCAGGACAAGGCGGCTTTCATTTTCTGTGTTGAAGACAGAGCACTGTTTTGTCAAGATTGTGATGAACCAATTCACTCAACTGGTAGTCTTTCAGCTAACCACCAGAGGTTCCTAGCCACTGGAATCAGAGTGGCCATGAGCTCAAGTTGTACGAAGGACGTTGACAAGGCCAAGATGGAACCTCCAAATCCGAAGAACCCTCAGGTTCCTGCTAAAGTGCCTTCACAACAAGTTCCCAACTTCACATCCTCATGGGCTGTTGATGACTTTCTCCACTTCTCTGATCTTGAGTCCTCTGACAAGGTTAGTAAAAGCTTGATGCTCATCTTCTAGGCATCCATTTATATGCTTTTTGTGGATCATACTGCAACAGAGGAAGTGAAATCTTTATAATTCTTGTGAAGAACTTATTCCATCATATTTTGATCAAGTAATTTTCACTAATTTGAAGGCATAAGTTTTTTAATGTTTACCTTCCTGCATATGTTTAGAGGTGAGTAGAAACATCTTTTCTCCCAAAGATCACGTACACACTAATTTAACTTAAAAGTTTCTGAACATTAGATTGTTAGCTTGAATCCATACCTGCAGTGTCTCCTAAAATTTTGGAGTTCAGATGCAGAACTGTATTTACAATGGGAAGCGAAATTTCCAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAGCTCAAAATAGGCAGGCTTTGGCTAGGATCCATGCCCTGTAGTTTTTTTTATGAGATTTCTAGTGCTTACTGTTTCTAACATTGAGGCAAATTTGTCACAAAGAATTGCATCACATTACTTGATTTATAGTTCTCCATCTACATATGATTATTTGGGCTATCACACTTATCCTTCAACTCCCATAACTGCAGCAGAAAGAACAACTAGAGTTTGGGGAATTAGAGTGGCTAGCAGAAATGGGCCTCTTTGGCGAGCAAGTTCCTCAAGAAGCTTTAGCTGCTGCTGAAGTTCCTGAGCTTCCTACATCACACTCAGGCAGTGCACTTGCATGCAGACCGACGAAGTCGAGCATATCATACAAAAAGCCTAGGATCGAGATGGTTGACGACGAGGAGTTCTTTACGGTTCCTGATCTTGGATGAACAGACAAGAGACATTGATGTTGAGTTGGTATTGCTTAATGAATAATACAGTTTATAACCTTACAAAATGTGTATGTATGTAGTATTGTCAACATCTATGGTTTGATAGTATGGATTATAGTAATCTTCTTTTATCTTGTGGCTAGAATATTCGTTCAGTCCTGTTTACTTTTGCTTTTGCATCTTATTAACCTTATTGTAACTTTTGGATCTTATATGAAAAATGTAAGATTATTTTATTGAATGGCAACTCATGTTTCAAAGATTTGAAGTTA GTAGCTAATTTTTTAGCGCTCGAAATTCCTCAGCCACAAGCCAATCGAGCTTCACAGCCACACAAATGGCGTCCACTCTTTTCCGCCTTGTTGTCTCCACCATCTTTCTTGATTTTGATTTCCCTAAATCTCAACCCTTATCATCTCACCCTTCTCGACCCTCCTTAATCCTCCGCCATTTACTCCTCTTTCTCTATCCCCTTCTTTCTCCGTTTTTATTCTCAAACACCCACTTTCCCTTCTTCTTCTCTTCCATTTTCTCTTCCATCTCTCCGGCGGTTGTGTTCTAGCGGCGTTAGGAGTTACTGTTTTTCATCAGAAGTTCATGGGTTCGTTGATCTTCGAGTAGGAAAGGGGGGAAGAGGGGTTTCCGGGAATCTATTGAAAATTGGTGTGGTAGTCCAGAAGGAGAAGATGAAAATACAGTGTGATGTTTGTGAGAAAGCTCCTGCTACTGTGATTTGTTGTGCGGATGAAGCGGCGCTTTGTGCGAAATGTGATGTTGAAGTTCATGCTGCGAATAAGCTTGCGAGTAAACACCAGAGGCTTCTTCTTCAGTGTCTCTCCACCAAGCTACCTAAATGCGATATATGCCAAGACAAGGCGGCTTTCATTTTCTGTGTTGAAGACAGAGCACTGTTTTGTCAAGATTGTGATGAACCAATTCACTCAACTGGTAGTCTTTCAGCTAACCACCAGAGGTTCCTAGCCACTGGAATCAGAGTGGCCATGAGCTCAAGTTGTACGAAGGACGTTGACAAGGCCAAGATGGAACCTCCAAATCCGAAGAACCCTCAGGTTCCTGCTAAAGTGCCTTCACAACAAGTTCCCAACTTCACATCCTCATGGGCTGTTGATGACTTTCTCCACTTCTCTGATCTTGAGTCCTCTGACAAGCAGAAAGAACAACTAGAGTTTGGGGAATTAGAGTGGCTAGCAGAAATGGGCCTCTTTGGCGAGCAAGTTCCTCAAGAAGCTTTAGCTGCTGCTGAAGTTCCTGAGCTTCCTACATCACACTCAGGCAGTGCACTTGCATGCAGACCGACGAAGTCGAGCATATCATACAAAAAGCCTAGGATCGAGATGGTTGACGACGAGGAGTTCTTTACGGTTCCTGATCTTGGATGAACAGACAAGAGACATTGATGTTGAGTTGGTATTGCTTAATGAATAATACAGTTTATAACCTTACAAAATGTGTATGTATGTAGTATTGTCAACATCTATGGTTTGATAGTATGGATTATAGTAATCTTCTTTTATCTTGTGGCTAGAATATTCGTTCAGTCCTGTTTACTTTTGCTTTTGCATCTTATTAACCTTATTGTAACTTTTGGATCTTATATGAAAAATGTAAGATTATTTTATTGAATGGCAACTCATGTTTCAAAGATTTGAAGTTA ATGAAAATACAGTGTGATGTTTGTGAGAAAGCTCCTGCTACTGTGATTTGTTGTGCGGATGAAGCGGCGCTTTGTGCGAAATGTGATGTTGAAGTTCATGCTGCGAATAAGCTTGCGAGTAAACACCAGAGGCTTCTTCTTCAGTGTCTCTCCACCAAGCTACCTAAATGCGATATATGCCAAGACAAGGCGGCTTTCATTTTCTGTGTTGAAGACAGAGCACTGTTTTGTCAAGATTGTGATGAACCAATTCACTCAACTGGTAGTCTTTCAGCTAACCACCAGAGGTTCCTAGCCACTGGAATCAGAGTGGCCATGAGCTCAAGTTGTACGAAGGACGTTGACAAGGCCAAGATGGAACCTCCAAATCCGAAGAACCCTCAGGTTCCTGCTAAAGTGCCTTCACAACAAGTTCCCAACTTCACATCCTCATGGGCTGTTGATGACTTTCTCCACTTCTCTGATCTTGAGTCCTCTGACAAGCAGAAAGAACAACTAGAGTTTGGGGAATTAGAGTGGCTAGCAGAAATGGGCCTCTTTGGCGAGCAAGTTCCTCAAGAAGCTTTAGCTGCTGCTGAAGTTCCTGAGCTTCCTACATCACACTCAGGCAGTGCACTTGCATGCAGACCGACGAAGTCGAGCATATCATACAAAAAGCCTAGGATCGAGATGGTTGACGACGAGGAGTTCTTTACGGTTCCTGATCTTGGATGA MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSTKLPKCDICQDKAAFIFCVEDRALFCQDCDEPIHSTGSLSANHQRFLATGIRVAMSSSCTKDVDKAKMEPPNPKNPQVPAKVPSQQVPNFTSSWAVDDFLHFSDLESSDKQKEQLEFGELEWLAEMGLFGEQVPQEALAAAEVPELPTSHSGSALACRPTKSSISYKKPRIEMVDDEEFFTVPDLG Homology
BLAST of CcUC06G110300 vs. NCBI nr
Match: XP_008460037.1 (PREDICTED: B-box zinc finger protein 24-like isoform X1 [Cucumis melo] >XP_008460038.1 PREDICTED: B-box zinc finger protein 24-like isoform X1 [Cucumis melo] >ADN34088.1 salt-tolerance protein [Cucumis melo subsp. melo] >KAA0039940.1 B-box zinc finger protein 24-like isoform X1 [Cucumis melo var. makuwa] >TYK24562.1 B-box zinc finger protein 24-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 472.2 bits (1214), Expect = 2.6e-129 Identity = 232/237 (97.89%), Postives = 235/237 (99.16%), Query Frame = 0
BLAST of CcUC06G110300 vs. NCBI nr
Match: XP_038875478.1 (B-box zinc finger protein 24-like isoform X1 [Benincasa hispida]) HSP 1 Score: 469.5 bits (1207), Expect = 1.7e-128 Identity = 231/237 (97.47%), Postives = 234/237 (98.73%), Query Frame = 0
BLAST of CcUC06G110300 vs. NCBI nr
Match: XP_031742347.1 (B-box zinc finger protein 24-like isoform X1 [Cucumis sativus] >KGN46304.1 hypothetical protein Csa_005362 [Cucumis sativus]) HSP 1 Score: 467.6 bits (1202), Expect = 6.3e-128 Identity = 229/237 (96.62%), Postives = 235/237 (99.16%), Query Frame = 0
BLAST of CcUC06G110300 vs. NCBI nr
Match: XP_008460039.1 (PREDICTED: B-box zinc finger protein 24-like isoform X2 [Cucumis melo]) HSP 1 Score: 465.7 bits (1197), Expect = 2.4e-127 Identity = 231/237 (97.47%), Postives = 234/237 (98.73%), Query Frame = 0
BLAST of CcUC06G110300 vs. NCBI nr
Match: NP_001295820.1 (B-box zinc finger protein 24-like [Cucumis sativus] >ACA24496.1 putative transcription factor [Cucumis sativus]) HSP 1 Score: 465.7 bits (1197), Expect = 2.4e-127 Identity = 228/237 (96.20%), Postives = 234/237 (98.73%), Query Frame = 0
BLAST of CcUC06G110300 vs. ExPASy Swiss-Prot
Match: Q96288 (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 1.0e-80 Identity = 158/248 (63.71%), Postives = 191/248 (77.02%), Query Frame = 0
BLAST of CcUC06G110300 vs. ExPASy Swiss-Prot
Match: Q9SID1 (B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2) HSP 1 Score: 293.9 bits (751), Expect = 1.6e-78 Identity = 157/241 (65.15%), Postives = 183/241 (75.93%), Query Frame = 0
BLAST of CcUC06G110300 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2) HSP 1 Score: 137.9 bits (346), Expect = 1.5e-31 Identity = 69/139 (49.64%), Postives = 90/139 (64.75%), Query Frame = 0
BLAST of CcUC06G110300 vs. ExPASy Swiss-Prot
Match: Q9LQZ7 (B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.2e-28 Identity = 66/142 (46.48%), Postives = 87/142 (61.27%), Query Frame = 0
BLAST of CcUC06G110300 vs. ExPASy Swiss-Prot
Match: O82617 (B-box zinc finger protein 23 OS=Arabidopsis thaliana OX=3702 GN=BBX23 PE=1 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.3e-27 Identity = 59/114 (51.75%), Postives = 78/114 (68.42%), Query Frame = 0
BLAST of CcUC06G110300 vs. ExPASy TrEMBL
Match: A0A1S3CBP7 (B-box zinc finger protein 24-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498974 PE=4 SV=1) HSP 1 Score: 472.2 bits (1214), Expect = 1.2e-129 Identity = 232/237 (97.89%), Postives = 235/237 (99.16%), Query Frame = 0
BLAST of CcUC06G110300 vs. ExPASy TrEMBL
Match: A0A5A7T9H8 (B-box zinc finger protein 24-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001070 PE=4 SV=1) HSP 1 Score: 472.2 bits (1214), Expect = 1.2e-129 Identity = 232/237 (97.89%), Postives = 235/237 (99.16%), Query Frame = 0
BLAST of CcUC06G110300 vs. ExPASy TrEMBL
Match: E5GC89 (Salt-tolerance protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 472.2 bits (1214), Expect = 1.2e-129 Identity = 232/237 (97.89%), Postives = 235/237 (99.16%), Query Frame = 0
BLAST of CcUC06G110300 vs. ExPASy TrEMBL
Match: A0A0A0KBS9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G081450 PE=4 SV=1) HSP 1 Score: 467.6 bits (1202), Expect = 3.0e-128 Identity = 229/237 (96.62%), Postives = 235/237 (99.16%), Query Frame = 0
BLAST of CcUC06G110300 vs. ExPASy TrEMBL
Match: B3TLK3 (Putative transcription factor OS=Cucumis sativus OX=3659 PE=2 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 1.2e-127 Identity = 228/237 (96.20%), Postives = 234/237 (98.73%), Query Frame = 0
BLAST of CcUC06G110300 vs. TAIR 10
Match: AT1G06040.1 (B-box zinc finger family protein ) HSP 1 Score: 301.2 bits (770), Expect = 7.3e-82 Identity = 158/248 (63.71%), Postives = 191/248 (77.02%), Query Frame = 0
BLAST of CcUC06G110300 vs. TAIR 10
Match: AT2G31380.1 (salt tolerance homologue ) HSP 1 Score: 293.9 bits (751), Expect = 1.2e-79 Identity = 157/241 (65.15%), Postives = 183/241 (75.93%), Query Frame = 0
BLAST of CcUC06G110300 vs. TAIR 10
Match: AT1G06040.2 (B-box zinc finger family protein ) HSP 1 Score: 229.9 bits (585), Expect = 2.1e-60 Identity = 118/174 (67.82%), Postives = 140/174 (80.46%), Query Frame = 0
BLAST of CcUC06G110300 vs. TAIR 10
Match: AT1G78600.1 (light-regulated zinc finger protein 1 ) HSP 1 Score: 137.9 bits (346), Expect = 1.1e-32 Identity = 69/139 (49.64%), Postives = 90/139 (64.75%), Query Frame = 0
BLAST of CcUC06G110300 vs. TAIR 10
Match: AT1G78600.2 (light-regulated zinc finger protein 1 ) HSP 1 Score: 137.9 bits (346), Expect = 1.1e-32 Identity = 69/139 (49.64%), Postives = 90/139 (64.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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