CcUC05G109120 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGTGGCAGAGATTTTCTTTTTCTTTTTTTTCCAGATTTGGTTAAAGGATTTAATTTTGTTTTATCTCGATCCAAAACTTATTTGGAAAAGAAAAAGAAATTGTAAAAATCTAAAATTTGATCAGAAGAATCTCAATAATTTTGGAAAATAAAATCCATTGAAATTTGAGCTAAGAAGGTGGCTGGCGACTGCATGTGCTTTAAGATAAAAGGATCACAGTCGTACGGTGGGCCAATATATCTTCAAAGAATAATGTTAAAATCTTATTTTTATCTATTTTTAGTTTCAGCGTGGGAAAAAAAATTAACTAAATATAATAAGAACTAATAGAGTATACTAATGGTTTTTTTTTTTTTTCATTAAAAAATAAATAAAATATAACTAATGTAAAATTTTAATTTATCTAGAAAAATAGTGAACTACTCATTCTTAAATTAAAATATTCATATATATAATTTTTCTATAGACAATATTTTACCAATATTTTCCTTAATATTGTCATAAAGTCAGAATTTTAATATTTTCTTCGATATTTCACCTCCAGATTGTTTTAGTAATTCTATTGCCGAAAATGAAATCTTAAAAATAATATAAATATAGATATGGTAGAAAATTATTTCATCCATAATAACAATTATTTCAATCAAAATCCAACTTAATCATTAATTACCGTAAAAGTTAAAAAGAACTAAATGGATTATTAGTGGCATCAAGTGAAACTAATTAATAGATAATGATTTGTTTAAGAAATGACATGTATTTATTATTCTCCCCTAATAAAAAAGAAAGTCTATCTCTCTTGATTTGGACATAATCAAAATTTGAATTTAGACATAAACTCTAAAGTTTGAATTTGAATCCAAGTGAATTTAGACAATCAAATTTTCATTCCAAATCAAATTTCACAAAGTTTATTTTAGAATTTTATTCCAAATCTAAAACAAATATTTCACCTTATTCTAAATATATTTTTTTATAAAAAAAATATATAATCCAAATTAAAACTATTTGAGATCATAATGTAGGAATTGTCATAATTAAAAATTTTGATTGAATTACAAGTCTTCTTGTATATTACATGAAAAAAAGGTTGACATAGAAACTTCAAAACTATAGTATAAACAACCATGCTCGTCAAATAATAGACTTTCTAAACGCACCTTAATAACTCAACTTCCCAATTAATAAAAATGTTGGCACCCAAAATTGTGAGAGGAAAGAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAATCAGATGTTTGGAAGAAGGAGCTGAGGAGTTTTTGCTAAAACCAGTGAAATTATCTGATGTCAATAAACTTAAGCCTTTCATATGTAGAGGTAAAGCCAAGGAACTGGATTTCAACAATCTCAAGAGAAAGGAAATGGAAAAGAGCCAATCATCTGAGAGAACAAGAACAAAATACAATGAACTTTTCTGA ATGAGACAATATTTTACCAATATTTTCCTTAATATTGTCATAAAATGTTTGGAAGAAGGAGCTGAGGAGTTTTTGCTAAAACCAGTGAAATTATCTGATGTCAATAAACTTAAGCCTTTCATATGTAGAGGTAAAGCCAAGGAACTGGATTTCAACAATCTCAAGAGAAAGGAAATGGAAAAGAGCCAATCATCTGAGAGAACAAGAACAAAATACAATGAACTTTTCTGA ATGAGACAATATTTTACCAATATTTTCCTTAATATTGTCATAAAATGTTTGGAAGAAGGAGCTGAGGAGTTTTTGCTAAAACCAGTGAAATTATCTGATGTCAATAAACTTAAGCCTTTCATATGTAGAGGTAAAGCCAAGGAACTGGATTTCAACAATCTCAAGAGAAAGGAAATGGAAAAGAGCCAATCATCTGAGAGAACAAGAACAAAATACAATGAACTTTTCTGA MRQYFTNIFLNIVIKCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKELDFNNLKRKEMEKSQSSERTRTKYNELF Homology
BLAST of CcUC05G109120 vs. NCBI nr
Match: XP_038892701.1 (two-component response regulator ORR4-like [Benincasa hispida]) HSP 1 Score: 117.5 bits (293), Expect = 5.1e-23 Identity = 58/62 (93.55%), Postives = 60/62 (96.77%), Query Frame = 0
BLAST of CcUC05G109120 vs. NCBI nr
Match: XP_023526911.1 (two-component response regulator ORR4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 111.3 bits (277), Expect = 3.7e-21 Identity = 55/60 (91.67%), Postives = 58/60 (96.67%), Query Frame = 0
BLAST of CcUC05G109120 vs. NCBI nr
Match: XP_022956694.1 (LOW QUALITY PROTEIN: two-component response regulator ORR11-like [Cucurbita moschata]) HSP 1 Score: 111.3 bits (277), Expect = 3.7e-21 Identity = 55/60 (91.67%), Postives = 58/60 (96.67%), Query Frame = 0
BLAST of CcUC05G109120 vs. NCBI nr
Match: KAG6601130.1 (Two-component response regulator ORR9, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 109.4 bits (272), Expect = 1.4e-20 Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 0
BLAST of CcUC05G109120 vs. NCBI nr
Match: KAG7031929.1 (Two-component response regulator ARR8, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 109.4 bits (272), Expect = 1.4e-20 Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 0
BLAST of CcUC05G109120 vs. ExPASy Swiss-Prot
Match: Q4GZK2 (Two-component response regulator ORR9 OS=Oryza sativa subsp. indica OX=39946 GN=RR9 PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 3.5e-06 Identity = 22/34 (64.71%), Postives = 29/34 (85.29%), Query Frame = 0
BLAST of CcUC05G109120 vs. ExPASy Swiss-Prot
Match: Q2RAP3 (Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica OX=39947 GN=RR9 PE=2 SV=2) HSP 1 Score: 52.0 bits (123), Expect = 3.5e-06 Identity = 22/34 (64.71%), Postives = 29/34 (85.29%), Query Frame = 0
BLAST of CcUC05G109120 vs. ExPASy Swiss-Prot
Match: Q9ZWS7 (Two-component response regulator ARR7 OS=Arabidopsis thaliana OX=3702 GN=ARR7 PE=1 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 7.7e-06 Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of CcUC05G109120 vs. ExPASy Swiss-Prot
Match: O80366 (Two-component response regulator ARR9 OS=Arabidopsis thaliana OX=3702 GN=ARR9 PE=1 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 7.7e-06 Identity = 27/54 (50.00%), Postives = 37/54 (68.52%), Query Frame = 0
BLAST of CcUC05G109120 vs. ExPASy Swiss-Prot
Match: O80365 (Two-component response regulator ARR8 OS=Arabidopsis thaliana OX=3702 GN=ARR8 PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 1.0e-05 Identity = 22/36 (61.11%), Postives = 29/36 (80.56%), Query Frame = 0
BLAST of CcUC05G109120 vs. ExPASy TrEMBL
Match: A0A6J1GZT5 (LOW QUALITY PROTEIN: two-component response regulator ORR11-like OS=Cucurbita moschata OX=3662 GN=LOC111458336 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.8e-21 Identity = 55/60 (91.67%), Postives = 58/60 (96.67%), Query Frame = 0
BLAST of CcUC05G109120 vs. ExPASy TrEMBL
Match: A0A5A7SZL1 (Two-component response regulator ORR9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G007810 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.6e-14 Identity = 43/47 (91.49%), Postives = 46/47 (97.87%), Query Frame = 0
BLAST of CcUC05G109120 vs. ExPASy TrEMBL
Match: A0A5D3CBW5 (Two-component response regulator ORR9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G003080 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.6e-14 Identity = 43/47 (91.49%), Postives = 46/47 (97.87%), Query Frame = 0
BLAST of CcUC05G109120 vs. ExPASy TrEMBL
Match: A0A0A0KV44 (Response regulatory domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G623800 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.6e-14 Identity = 43/47 (91.49%), Postives = 46/47 (97.87%), Query Frame = 0
BLAST of CcUC05G109120 vs. ExPASy TrEMBL
Match: A0A1S3BH64 (two-component response regulator ORR9-like OS=Cucumis melo OX=3656 GN=LOC103489512 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.6e-14 Identity = 43/47 (91.49%), Postives = 46/47 (97.87%), Query Frame = 0
BLAST of CcUC05G109120 vs. TAIR 10
Match: AT1G19050.1 (response regulator 7 ) HSP 1 Score: 50.8 bits (120), Expect = 5.5e-07 Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of CcUC05G109120 vs. TAIR 10
Match: AT3G57040.1 (response regulator 9 ) HSP 1 Score: 50.8 bits (120), Expect = 5.5e-07 Identity = 27/54 (50.00%), Postives = 37/54 (68.52%), Query Frame = 0
BLAST of CcUC05G109120 vs. TAIR 10
Match: AT2G41310.1 (response regulator 3 ) HSP 1 Score: 50.4 bits (119), Expect = 7.2e-07 Identity = 22/36 (61.11%), Postives = 29/36 (80.56%), Query Frame = 0
BLAST of CcUC05G109120 vs. TAIR 10
Match: AT1G74890.1 (response regulator 15 ) HSP 1 Score: 49.3 bits (116), Expect = 1.6e-06 Identity = 28/60 (46.67%), Postives = 38/60 (63.33%), Query Frame = 0
BLAST of CcUC05G109120 vs. TAIR 10
Match: AT3G48100.1 (response regulator 5 ) HSP 1 Score: 47.4 bits (111), Expect = 6.1e-06 Identity = 24/43 (55.81%), Postives = 32/43 (74.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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