CcUC05G107530 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC05G107530
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionserine/arginine-rich splicing factor RSZ21
LocationCicolChr05: 34517741 .. 34523525 (+)
RNA-Seq ExpressionCcUC05G107530
SyntenyCcUC05G107530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGTCAATCGACCAAAATAAATCTGTTTGAAAAGTGAGGACCAAAACATAATTTAATTAAGAGTCTTTTAATTTCAGTCTACAAGGGTAGTTTGAAGTCCTAAAGAATATGTATTTATATAGTAACATAAAAGTTACTTTGACTGAAAGAAAATTAAAATTCGAGTTTGAAATCAAGTCACCAAAAATGAAAAACGAAACTAAGTGAATATTGGTTCAAATATCCTTCTTTACGAGTTCTATAATTTAAATACAATAAAAATAAATTATCAATACATTAATTAATGGCACGAGGCTTTAATTGTGAAACAAATTAAATATAATCCACTATAATTATATATATATATATTTTTTATATTTATTAGAATTCTATAAATTTCGTAGGAGAGATGTGTTTTATAATTCATGGACATAAGTGAGAACTTTTTCTTAAACGCACGATTATAACATGTTTTTCATGTGTAATTTAAAGAAATTAAAAGATTATAGTAATAAGTGACATATTTTGTTAAGCTATAATAATTTTATTCCATGAAAATTATTATAGCTATTCAATCAATTTTAAATAACTAAATTTAAGATAAAATAAAATTGAATTTAATCTAAATTTTATTTATTTATTTATTTTCTGAAAATTTAGGTCTGGCTTCATAACGTACATGAAAAGACATTTTAATTTATTTTTTTGTTGTAGACAAATTATCCTAAAAGAAAATCCGGCCCACTGACCCATGAAGATCAACTGGGCTCAGATTAGCAAGAAAGCTCGGCCCAATATGGCTGCCTTCATCGACAACAAGAAAACCAAACTCACTCATCACTTGACTGATACCTTCTGCGGACTTTCCGAGCATCGGAGCTCTGCGACTACGGGCAGCGCCGTTTTCCTACCTTATCACCGGCTGATCTCTTCGTACTTTTCAACGATCCGCGAGATCTTTATCTTGGTAGGCTTCAGCTTCTCGATCAATTTCAGCATAACCCTAATTCTTTATCTTTTTTGAACGATGAATCCTTGAACTAGCGCTACGATTTTGTTTCTTCTTCCTCCATTTGTTATCACCTCTTTCAAATACTTCGTATGTGAACTTTTTTGTGTGTATTTTTACCCCCATGTTGACTAATTTCGCGTCGCAGCTTTCGCATCCTGGGGTTGGGAGGGTTGTATTATTCCCATCCCAATTTGTTGTGTAGATTAAACTTTAACTCCTCTCCGTTGTTTTCTTTTTTCTTTTTTCTTTTTTTTTTTGGGGGGGGATGATTCGTTTTCTCAAACTAGCATATTTCCACGGATTGCTTACTCTTACTATTTTCAGGCGGTTATTTGGCTCCTTCGCTACAATGACTCGAGTTTATATTGGTAATCTGGATCCACGCGTTACAGAGAGGGATCTTGAAGATGAATTTCGAATGTTCGGTGTTCTTAGGAGGTGATTTCTGTTTGATTTTTTTGTATCGAGGCATTCTTTACATGTTTTCTTAAATTTAGCACCTTTTAGACGCAAGATATTTAAAAATGTGTAATTTTTAGTCCTTGGATTCTTCATCGGCAGTCTGTTGGGAATCCTGGGATTTATATTCTACATTTACTTTTACTTCAACGCTTAATGTTTTGAGATTATATTCATGGTTTCTTTCAGCATTACTCTTAGATTTTTTTACAGCACTTTACTATCTATTCATGGCGTTTTTACCTGGCCAAACCTAGACATTTCAGCACTCTACAGGGGAAGAGTGACAGCAGAAAAAAGCCTTACTTTCTCTCTTTGAATGGCAGTACGTCTATTTTAAATCTGAGTACTATTGAAGTCCCGCTGGTTTCTGCCTGTAAGCAATGGGAGGTCACTGATTAGGCTCTTGCTTTATGCATAAAATCAATATCTCCCTTCTCGTTAGTTATTCATATTTGTTTGAGAACCTGAGACAGAGACTCTCTGAGATATGTCCTCTGAAGTTTGCTGATGGCTATTCTTGAGATTGGTGGGATCAACTCAGCCAAATGCCAGAGTTGTATTTCTGTTGTCTAGATTTTGCTTCAAGGACATGTATGCCTTAATTGAAGTTAATTAGGACGAGATAGTTTCCAGCATGTATCCTCCATTTGCTATAATTTTAAATAACATTTCTGTTTCCTTGTTCCTTTGTATTAAAGTGCATACTGAAGCATGTGTTTTTTAATAAAACATACAGTGTTTGGGTTGCTAGAAGGCCTCCAGGATATGCATTTATTGAGTTTGATGATCGCAGGGATGCTCTAGATGCAATACAAGCATTGGATGGTCAGTTTTAAATAAAAGATCTATGTTTTCTTTTTCTTTTTTCCCTGTAATATATCAAATTGTGCATTTCATTCCTTCCATCAAATGATATTTACTTCTGTATATGTGTGTGTGTATGCTTGTGCATGCTTTTCTTGATTACTAGTGAAAATATGATCAACCAACTATCAGTAGGGGTTTTTCCTCAGCTTTCTGTCATCTAGTTTTCATTACCGCAGTGAATTAGAAATTTATTATTGATCTAGTCTAATATCAACTTGTATCCACTGAACTGAACTAAATCATGGAAATTTTGTAGATTCTTTAGATTTTACTTTATTCTTAGAAACCACCTTATTGAAAAAGAGTGTAATGAATGGGCCGGTCTCTCCAATATGCTTCAAAATGTGATTTTGGGGATCATCATGATTCTAAGATGTAGAAACTTGAGGTTATGGAAGGCATTCTTCTAAATTATATTTTAATTTTGTCTTTGATATTAAGGGTGTTTGAACTGACTAGAAAAAAAAATGTTTAAAAAAAGTCATTTTTATTTAAACTCTTTGGATAGAAATGGTCGAAATTACATTGGCAATAAGCTTTAAACATGCTCCCTGAATCCTAGCCTCTTATTTATCTCCTAACTCGTGCATCTTGCACAAGCATGATGAATTGAATCAATTTAATCTCTATTTCCAGACTTCCAGAATTTTTTTTTTTTTTTTTTTTNACTTTGATTTAAGATTGATTCTAAACTTTTCTCAATGATTCAAACCTAGGCACAAACCAATAAGTAAGGGATTTAGAACAAATTTTCAGGAACTAAAGCCAAACCTCATACAGGGTCACCAAGTCTTAGAGGTTACCAAAAGTCCACCAAGAACGAACCCCAAACTTCGACAACAAAACTCAACCACACACAACCACCAAGAATGAAAATCAACACTACTATCCACGCCACTTCCCTACTTCAAAAACTAAGATCTAGCATCGACGCATTAAGAGCAAGTCAAGATTTATACAAAACTCAATGTATTTTCAATAACTATAAGAAAACTGACAAAAACTTGCCAAAAAATAACCAAAATCTTACTAAAAAGAGAATCCTGCAGGTTAGATGGCAGCGCGACAGTAGCTTGATGGCAGAATCTTGGCAACGGCAACTAGATCTGCACAGATCTAATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTTCGCTGTTTTTGGCATCTCTTGGTGCTTCCACAAGTGTCATAAGTTGGTGGTCGAGTCTTTCCAAAGGTGAAGATAAACTGCTATGGAATAATTCAGATATTGCCATGTTATGAAGCATGATTTGGGAGACGTCAAATGAATTTTCAAGATGCTTTCTCTTCAGTGGGGGTGTTGTTGAACCTTGTTAAACTTTTCTTCTCTATGGCACACTAGATCAAATATTTTTCTATTGCAATTATAGTCTATCCTTCATCCAAGCCAATTGGGATCCTTCTCTGTTGCTTCCTAGGGCTTATAGGGCGGTTCCTTATCTCCCTGTTCTTAGTTCTATTGCCTTGAGTTAAGGCTATCTTTTATTTTATTTGTGATTTTATTGGGCTCCTTTTATAGGGAAAAATGGTTGGCGCGTGGAGCTTTCTCACAACTCTAAAGGTGGTGGAGGAGGTGGTGGTCGTCGTGGCCGTGGTGGTGGTGATGATTTGAAATGTTATGAATGTGGTGAGCCTGGTCATTTTGCTCGTGAGTGTCGTTCACGTGGGGGCTCACGAGGGGTAGGAGGTGGTTTACGTCGTAGTCCTTCTCCTCGGCGTCGTCGGAGTCCAAGCTATGAAAGATATGGCCGCAGGTGTGCTAAAGCTTTGTGTTTTTTTAAGCACACCAAACTATCTAAGTGATGTCAAATCAACAGGTGGTTTGGTTTTATATATAGTTTAGGCCTTGATGTTCCATCACTTTTTTCCCTTTTCCTCTGTAGGAGTAACAGTCCTCGTGGTAAAAGATCCCCACGACGTCGCAGCATTACACCTCCTAAGCGTGGTCGGAGCTACAGCAGATCTCCTCCATACCGCCATGCCCGTCGTGCTTCACCTTATGCTAATGGGTATGCCTTACTTCTCTTAGTCATGAGAACTATTCTCTAAAACTATTTAGTTAGTGAGAGGGGAGAACTTAATTGCCTTACTTAGGTTGTTTTGTGCACATGGGTGATGGGCCTTGGGTAATCATTGGGAATTAGTGCAGTAGAACACGGCCATCCTGAACGGCACTGCCACTGGCACTTTTGAAGTCTGATTCCAGGCCATCACTAATATTTTCTCCCTTAACTAACTAGGCATTTCTTAACCGTTTTACCCCTCCTGGCATGTCTTCATTATTGGAGGCCTATAATGTTTGTACAAATTGAGCAGTAAATGATACTCTACTACAAATTCTTGTCAATACATACTTGATTGAGCAATATATTCCAAACTTCTCTTTCTGGATACAAGTACATCGATCTGAGAGTTGCATGTTAATCATTATTGCAGAGATTGATGCTGGAATCAAGGCTGGATGCTGTTCTGGTAGAACTTAGATGATGGTGTTTCTGCTATACTGTAGTTCTAATAGGAATTGTGGAGTGAACCGGAACCATGTAGTTAAGTTCATCTGACAATTGGTTCTCTTTGAAACCTGGATTTGGACGGGTGTCTACGAAGTGTTTTAAGCCACGAAATGGGGTTCTGTCTGGCACCATTTTGTGTTGGCTCTCTTCCGCCCCGCTGAAACTCGGAGGTTTCTTTCTTGCTTTCAAAATTATATCTTCTACCTAGAGTTTTATATCTTCTACCTTTCTATCTATTTATCAATATTTCTTTTTTCATTGGACGCCCCTAAAGATTTATCTGTTGGCTGTTTTTTTTTTCTTTCTTGTTCTTTTGAGGTGTGATTTTCGGCTATATATGGCATCGTTACTCAGCTAACTGCATCTTAGTGCATCACGCTTCTCAATATCTGCTCTGCTCCTCAATCATCTTCTTGTGTTACTACAACTGGTTGCATGCTGTTTGTATTGCACTCTTCTGCAAGAAGGCTGCCTATATTGTTAATCCTTTTTAGGTGGTTGAAGAAGATGAAGCTGTTTATATGTCATTTTCTGCTCATCATCTTCTCGCTTATCAACGTTTTACGAGCTCCTTCTATTACGTACACGAATCTATCATGAGAGATTCCTACTAGTTTTATTGCATCGGCATCTTGTGCGCTTCAACTTGTTTATTGCTCTCCCCAACTGCTGCCTTGCTCCACAAACCTACCTTCCATTGTTATGCTTCCTTCAATCTTACTTCTCCTTAAGTTAGAGACCACCACCACTTCCATTGCTATTTTCTTCTCATTAGTTTGTGGTGGTTGCAGACTTTTAGATGGTGGAGGATGTTGGAAATTTGAAATGCTTGTTTATATTCTGACTGTTTCTCGTTTGTTCTTTGCATAGATATATACTTTGAAGAGCCCCCCCCCCCCCCCCCCCC

mRNA sequence

ATGAAAGTCTGGCTTCATAACATCAACTGGGCTCAGATTAGCAAGAAAGCTCGGCCCAATATGGCTGCCTTCATCGACAACAAGAAAACCAAACTCACTCATCACTTGACTGATACCTTCTGCGGACTTTCCGAGCATCGGAGCTCTGCGACTACGGGCAGCGCCGTTTTCCTACCTTATCACCGGCTGATCTCTTCGCGGTTATTTGGCTCCTTCGCTACAATGACTCGAGTTTATATTGGTAATCTGGATCCACGCGTTACAGAGAGGGATCTTGAAGATGAATTTCGAATGTTCGGTGTTCTTAGGAGTGTTTGGGTTGCTAGAAGGCCTCCAGGATATGCATTTATTGAGTTTGATGATCGCAGGGATGCTCTAGATGCAATACAAGCATTGGATGGGAAAAATGGTTGGCGCGTGGAGCTTTCTCACAACTCTAAAGGTGGTGGAGGAGGTGGTGGTCGTCGTGGCCGTGGTGGTGGTGATGATTTGAAATGTTATGAATGTGGTGAGCCTGGTCATTTTGCTCGTGAGTGTCGTTCACGTGGGGGCTCACGAGGGGTAGGAGGTGGTTTACGTCGTAGTCCTTCTCCTCGGCGTCGTCGGAGTCCAAGCTATGAAAGATATGGCCGCAGGAGTAACAGTCCTCGTGGTAAAAGATCCCCACGACGTCGCAGCATTACACCTCCTAAGCGTGGTCGGAGCTACAGCAGATCTCCTCCATACCGCCATGCCCGTCGTGCTTCACCTTATGCTAATGGAGATTGATGCTGGAATCAAGGCTGGATGCTGTTCTGGTAGAACTTAGATGATGGTGTTTCTGCTATACTGTAGTTCTAATAGGAATTGTGGAGTGAACCGGAACCATGTAGTTAAGTTCATCTGACAATTGGTTCTCTTTGAAACCTGGATTTGGACGGGTGTCTACGAAGTGTTTTAAGCCACGAAATGGGGTTCTGTCTGGCACCATTTTGTGTTGGCTCTCTTCCGCCCCGCTGAAACTCGGAGGTGTGATTTTCGGCTATATATGGCATCGTTACTCAGCTAACTGCATCTTAGTGCATCACGCTTCTCAATATCTGCTCTGCTCCTCAATCATCTTCTTGTGTTACTACAACTGGTTGCATGCTGTTTGTATTGCACTCTTCTGCAAGAAGGCTGCCTATATTGTTAATCCTTTTTAGGTGGTTGAAGAAGATGAAGCTGTTTATATGTCATTTTCTGCTCATCATCTTCTCGCTTATCAACGTTTTACGAGCTCCTTCTATTACGTACACGAATCTATCATGAGAGATTCCTACTAGTTTTATTGCATCGGCATCTTGTGCGCTTCAACTTGTTTATTGCTCTCCCCAACTGCTGCCTTGCTCCACAAACCTACCTTCCATTGTTATGCTTCCTTCAATCTTACTTCTCCTTAAGTTAGAGACCACCACCACTTCCATTGCTATTTTCTTCTCATTAGTTTGTGGTGGTTGCAGACTTTTAGATGGTGGAGGATGTTGGAAATTTGAAATGCTTGTTTATATTCTGACTGTTTCTCGTTTGTTCTTTGCATAGATATATACTTTGAAGAGCCCCCCCCCCCCCCCCCCCC

Coding sequence (CDS)

ATGAAAGTCTGGCTTCATAACATCAACTGGGCTCAGATTAGCAAGAAAGCTCGGCCCAATATGGCTGCCTTCATCGACAACAAGAAAACCAAACTCACTCATCACTTGACTGATACCTTCTGCGGACTTTCCGAGCATCGGAGCTCTGCGACTACGGGCAGCGCCGTTTTCCTACCTTATCACCGGCTGATCTCTTCGCGGTTATTTGGCTCCTTCGCTACAATGACTCGAGTTTATATTGGTAATCTGGATCCACGCGTTACAGAGAGGGATCTTGAAGATGAATTTCGAATGTTCGGTGTTCTTAGGAGTGTTTGGGTTGCTAGAAGGCCTCCAGGATATGCATTTATTGAGTTTGATGATCGCAGGGATGCTCTAGATGCAATACAAGCATTGGATGGGAAAAATGGTTGGCGCGTGGAGCTTTCTCACAACTCTAAAGGTGGTGGAGGAGGTGGTGGTCGTCGTGGCCGTGGTGGTGGTGATGATTTGAAATGTTATGAATGTGGTGAGCCTGGTCATTTTGCTCGTGAGTGTCGTTCACGTGGGGGCTCACGAGGGGTAGGAGGTGGTTTACGTCGTAGTCCTTCTCCTCGGCGTCGTCGGAGTCCAAGCTATGAAAGATATGGCCGCAGGAGTAACAGTCCTCGTGGTAAAAGATCCCCACGACGTCGCAGCATTACACCTCCTAAGCGTGGTCGGAGCTACAGCAGATCTCCTCCATACCGCCATGCCCGTCGTGCTTCACCTTATGCTAATGGAGATTGA

Protein sequence

MKVWLHNINWAQISKKARPNMAAFIDNKKTKLTHHLTDTFCGLSEHRSSATTGSAVFLPYHRLISSRLFGSFATMTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDGKNGWRVELSHNSKGGGGGGGRRGRGGGDDLKCYECGEPGHFARECRSRGGSRGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRASPYANGD
Homology
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BLAST of CcUC05G107530 vs. NCBI nr
Match: XP_038892593.1 (serine/arginine-rich splicing factor RSZ21 [Benincasa hispida])

HSP 1 Score: 355.9 bits (912), Expect = 2.9e-94
Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 0 

Query: 75  MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 134
           MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 135 KNGWRVELSHNSKGGGGGGGRRGRGGGDDLKCYECGEPGHFARECRSRGGSRGVGGGLRR 194
           KNGWRVELSHNSKGGGGGGGRRGRGGGDDLKCYECGEPGHFARECRSRGGSRGV GGLRR
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGDDLKCYECGEPGHFARECRSRGGSRGV-GGLRR 120

Query: 195 SPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRASPYANG 254
           SPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRASPYANG
Sbjct: 121 SPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRASPYANG 180

Query: 255 D 256
           D
Sbjct: 181 D 180

[Close]
BLAST of CcUC05G107530 vs. NCBI nr
Match: XP_008446226.1 (PREDICTED: serine/arginine-rich splicing factor RSZ21 [Cucumis melo] >XP_008446227.1 PREDICTED: serine/arginine-rich splicing factor RSZ21 [Cucumis melo])

HSP 1 Score: 355.9 bits (912), Expect = 2.9e-94
Identity = 181/187 (96.79%), Postives = 181/187 (96.79%), Query Frame = 0 

Query: 75  MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 134
           MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 135 KNGWRVELSHNSKGGGGGGGRRGR------GGGDDLKCYECGEPGHFARECRSRGGSRGV 194
           KNGWRVELSHNSKGGGGGGGRRGR      GGGDDLKCYECGEPGHFARECRSRGGSRGV
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120

Query: 195 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA 254
           GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA
Sbjct: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA 180

Query: 255 SPYANGD 256
           SPYANGD
Sbjct: 181 SPYANGD 187

[Close]
BLAST of CcUC05G107530 vs. NCBI nr
Match: XP_011655636.1 (serine/arginine-rich splicing factor RSZ21 [Cucumis sativus] >KAE8648723.1 hypothetical protein Csa_008378 [Cucumis sativus])

HSP 1 Score: 355.5 bits (911), Expect = 3.8e-94
Identity = 181/188 (96.28%), Postives = 181/188 (96.28%), Query Frame = 0 

Query: 75  MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 134
           MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 135 KNGWRVELSHNSKGGGGGGGRRGR-------GGGDDLKCYECGEPGHFARECRSRGGSRG 194
           KNGWRVELSHNSKGGGGGGGRRGR       GGGDDLKCYECGEPGHFARECRSRGGSRG
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGGDDLKCYECGEPGHFARECRSRGGSRG 120

Query: 195 VGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARR 254
           VGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARR
Sbjct: 121 VGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARR 180

Query: 255 ASPYANGD 256
           ASPYANGD
Sbjct: 181 ASPYANGD 188

[Close]
BLAST of CcUC05G107530 vs. NCBI nr
Match: TYK15593.1 (serine/arginine-rich splicing factor RSZ21 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 353.2 bits (905), Expect = 1.9e-93
Identity = 180/186 (96.77%), Postives = 180/186 (96.77%), Query Frame = 0 

Query: 75  MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 134
           MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 135 KNGWRVELSHNSKGGGGGGGRRGR------GGGDDLKCYECGEPGHFARECRSRGGSRGV 194
           KNGWRVELSHNSKGGGGGGGRRGR      GGGDDLKCYECGEPGHFARECRSRGGSRGV
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120

Query: 195 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA 254
           GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA
Sbjct: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA 180

[Close]
BLAST of CcUC05G107530 vs. NCBI nr
Match: XP_022151054.1 (serine/arginine-rich splicing factor RSZ21 [Momordica charantia])

HSP 1 Score: 352.8 bits (904), Expect = 2.4e-93
Identity = 175/181 (96.69%), Postives = 178/181 (98.34%), Query Frame = 0 

Query: 75  MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 134
           MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 135 KNGWRVELSHNSKGGGGGGGRRGRGGGDDLKCYECGEPGHFARECRSRGGSRGVGGGLRR 194
           KNGWRVELSHN+KG GGGGGRRGRGGGDDLKCYECGEPGHFARECRSRG SR +GGGLRR
Sbjct: 61  KNGWRVELSHNAKGSGGGGGRRGRGGGDDLKCYECGEPGHFARECRSRGASRSIGGGLRR 120

Query: 195 SPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRASPYANG 254
           SPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARR+SPYANG
Sbjct: 121 SPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRSSPYANG 180

Query: 255 D 256
           D
Sbjct: 181 D 181

[Close]
BLAST of CcUC05G107530 vs. ExPASy Swiss-Prot
Match: O81127 (Serine/arginine-rich splicing factor RSZ21 OS=Arabidopsis thaliana OX=3702 GN=RSZ21 PE=1 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.4e-66
Identity = 142/193 (73.58%), Postives = 152/193 (78.76%), Query Frame = 0 

Query: 75  MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 134
           MTRVY+GNLDPRVTER+LEDEF+ FGVLR+VWVARRPPGYAF+EFDD RDALDAI ALD 
Sbjct: 1   MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60

Query: 135 KNGWRVELSHNSKGGGGGGGRRGRGGGDDLKCYECGEPGHFARECRSRGGSRGVGGGLRR 194
           KNGWRVELSH  KGG GGGG R RGG +D KCYECGE GHFARECR     RG G   RR
Sbjct: 61  KNGWRVELSHKDKGGRGGGGGR-RGGIEDSKCYECGELGHFARECR-----RGRGSVRRR 120

Query: 195 SPSPRRRRSPSYERYGRRSNSPRGKRS-PRRRSITPPKRGRSYSRSPPYRHAR------- 254
           SPSPRRRRSP Y  Y RRS SPRG+RS PRRRS+TPP+RGRSYSRSPPYR +R       
Sbjct: 121 SPSPRRRRSPDY-GYARRSISPRGRRSPPRRRSVTPPRRGRSYSRSPPYRGSRRDSPRRR 180

[Close]
BLAST of CcUC05G107530 vs. ExPASy Swiss-Prot
Match: O81126 (Serine/arginine-rich splicing factor RSZ22 OS=Arabidopsis thaliana OX=3702 GN=RSZ22 PE=1 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 4.5e-58
Identity = 134/198 (67.68%), Postives = 148/198 (74.75%), Query Frame = 0 

Query: 75  MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 134
           M+RVY+GNLDPRVTER+LEDEFR FGV+RSVWVARRPPGYAF++F+D RDA DAI+ALDG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDG 60

Query: 135 KNGWRVELSHN-------SKGG--GGGGGRRGRGGGDDLKCYECGEPGHFARECRSRGGS 194
           KNGWRVE SHN        +GG  GGGGG RG  GG DLKCYECGE GHFARECR+RGG+
Sbjct: 61  KNGWRVEQSHNRGERGGGGRGGDRGGGGGGRGGRGGSDLKCYECGETGHFARECRNRGGT 120

Query: 195 RGVGGGLRRSPS-----PRRRRSPSYERYGRRSNSPRGKR--SPRRRSIT-PPKRGRSYS 254
                G RRS S     PR RRSPS   YGRRS SPR +    PRRRS + PP RGRSYS
Sbjct: 121 -----GRRRSKSRSRTPPRYRRSPS---YGRRSYSPRARSPPPPRRRSPSPPPARGRSYS 180

Query: 255 RSPPYRHARRASPYANGD 256
           RSPP   AR   PYANG+
Sbjct: 181 RSPPPYRAREEVPYANGN 190

[Close]
BLAST of CcUC05G107530 vs. ExPASy Swiss-Prot
Match: Q9SJA6 (Serine/arginine-rich splicing factor RSZ22A OS=Arabidopsis thaliana OX=3702 GN=RSZ22A PE=1 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 4.5e-58
Identity = 128/192 (66.67%), Postives = 143/192 (74.48%), Query Frame = 0 

Query: 75  MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 134
           M+RVY+GNLDPRVTER+LEDEFR FGV+RSVWVARRPPGYAF++F+D RDA DAI+ +DG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRSFGVIRSVWVARRPPGYAFLDFEDSRDARDAIREVDG 60

Query: 135 KNGWRVELSHNSKGGGGGGGRRGRG------GGDDLKCYECGEPGHFARECRSRGGSRGV 194
           KNGWRVE SHN  GGGG GG RG G      GG DLKCYECGE GHFARECRSRGGS   
Sbjct: 61  KNGWRVEQSHNRGGGGGRGGGRGGGDGGRGRGGSDLKCYECGESGHFARECRSRGGS--- 120

Query: 195 GGGLRRSPS-----PRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYR 254
            GG RRS S     PR R+SP+Y   GRRS SPR +  P  R  +P  RGR+YSRSPP  
Sbjct: 121 -GGRRRSRSRSRSPPRYRKSPTYG--GRRSYSPRARSPPPPRRRSPSPRGRNYSRSPPPY 180

Query: 255 HARRASPYANGD 256
            AR   PYANG+
Sbjct: 181 RARDEVPYANGN 186

[Close]
BLAST of CcUC05G107530 vs. ExPASy Swiss-Prot
Match: Q69KL9 (Serine/arginine-rich splicing factor RSZ21A OS=Oryza sativa subsp. japonica OX=39947 GN=RSZ21A PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.5e-56
Identity = 126/184 (68.48%), Postives = 139/184 (75.54%), Query Frame = 0 

Query: 75  MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 134
           M RVY+GNLDPRVT R+LEDEFR+FGVLRSVWVAR+PPG+AFI+FDDRRDA DAI+ +DG
Sbjct: 1   MARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDIDG 60

Query: 135 KNGWRVELSHNSKGGGGGGGRRGRGGGDDLKCYECGEPGHFARECRSRGGSRGVGGGLRR 194
           KNGWRVELS N+  G GG   R R G  + KCYECGE GHFARECR R GS G+G G RR
Sbjct: 61  KNGWRVELSRNASSGRGG---RDRYGSSESKCYECGETGHFARECRLRIGSGGLGSGRRR 120

Query: 195 SPSPRRRRSPSYER---YGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRASP- 254
           S S  R RSP Y R   YGRRS SP G RSPRRRS++ P R RSYSRSP Y   R  SP 
Sbjct: 121 SRSRSRSRSPRYRRSPSYGRRSYSPAG-RSPRRRSVS-PARARSYSRSPQYNRGRDESPA 179

[Close]
BLAST of CcUC05G107530 vs. ExPASy Swiss-Prot
Match: Q6K4N0 (Serine/arginine-rich splicing factor RSZ21 OS=Oryza sativa subsp. japonica OX=39947 GN=RSZP21 PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 6.1e-55
Identity = 122/183 (66.67%), Postives = 139/183 (75.96%), Query Frame = 0 

Query: 75  MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 134
           M R+Y+GNLDPRVT  +LEDEFR+FGVLRSVWVAR+PPG+AFI+FDD+RDA DA++ LDG
Sbjct: 1   MARLYVGNLDPRVTSGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 60

Query: 135 KNGWRVELSHNSKGGGGGGGRRGRGGGDDLKCYECGEPGHFARECRSRGGSRGVGGGLRR 194
           KNGWRVELS NS   GG    R R GG ++KCYECGE GHFARECR R G  G+G G RR
Sbjct: 61  KNGWRVELSRNSSSRGG----RDRHGGSEMKCYECGETGHFARECRLRIGPGGLGSGKRR 120

Query: 195 SPSPRRRRSPSYER---YGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRASPY 254
           S S  R RSP Y +   YGRRS SPR  RSPRRRS++ P RGRSYSRSP     R  SPY
Sbjct: 121 SRSRSRSRSPQYRKSPTYGRRSYSPR-DRSPRRRSVS-PVRGRSYSRSP---RGRGGSPY 174

[Close]
BLAST of CcUC05G107530 vs. ExPASy TrEMBL
Match: A0A1S3BEJ4 (serine/arginine-rich splicing factor RSZ21 OS=Cucumis melo OX=3656 GN=LOC103489020 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.4e-94
Identity = 181/187 (96.79%), Postives = 181/187 (96.79%), Query Frame = 0 

Query: 75  MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 134
           MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 135 KNGWRVELSHNSKGGGGGGGRRGR------GGGDDLKCYECGEPGHFARECRSRGGSRGV 194
           KNGWRVELSHNSKGGGGGGGRRGR      GGGDDLKCYECGEPGHFARECRSRGGSRGV
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120

Query: 195 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA 254
           GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA
Sbjct: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA 180

Query: 255 SPYANGD 256
           SPYANGD
Sbjct: 181 SPYANGD 187

[Close]
BLAST of CcUC05G107530 vs. ExPASy TrEMBL
Match: A0A5D3CUM7 (Serine/arginine-rich splicing factor RSZ21 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00890 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 9.0e-94
Identity = 180/186 (96.77%), Postives = 180/186 (96.77%), Query Frame = 0 

Query: 75  MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 134
           MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 135 KNGWRVELSHNSKGGGGGGGRRGR------GGGDDLKCYECGEPGHFARECRSRGGSRGV 194
           KNGWRVELSHNSKGGGGGGGRRGR      GGGDDLKCYECGEPGHFARECRSRGGSRGV
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120

Query: 195 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA 254
           GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA
Sbjct: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA 180

[Close]
BLAST of CcUC05G107530 vs. ExPASy TrEMBL
Match: A0A6J1DBV4 (serine/arginine-rich splicing factor RSZ21 OS=Momordica charantia OX=3673 GN=LOC111019078 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.2e-93
Identity = 175/181 (96.69%), Postives = 178/181 (98.34%), Query Frame = 0 

Query: 75  MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 134
           MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 135 KNGWRVELSHNSKGGGGGGGRRGRGGGDDLKCYECGEPGHFARECRSRGGSRGVGGGLRR 194
           KNGWRVELSHN+KG GGGGGRRGRGGGDDLKCYECGEPGHFARECRSRG SR +GGGLRR
Sbjct: 61  KNGWRVELSHNAKGSGGGGGRRGRGGGDDLKCYECGEPGHFARECRSRGASRSIGGGLRR 120

Query: 195 SPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRASPYANG 254
           SPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARR+SPYANG
Sbjct: 121 SPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRSSPYANG 180

Query: 255 D 256
           D
Sbjct: 181 D 181

[Close]
BLAST of CcUC05G107530 vs. ExPASy TrEMBL
Match: A0A6J1GX57 (serine/arginine-rich splicing factor RSZ21-like OS=Cucurbita moschata OX=3662 GN=LOC111458322 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 2.5e-91
Identity = 178/186 (95.70%), Postives = 179/186 (96.24%), Query Frame = 0 

Query: 75  MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 134
           MTRVYIGNLDPRVTER+LEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 135 KNGWRVELSHNSKGGGGGGGRRGR----GGGDDLKCYECGEPGHFARECRSRGGSRGVGG 194
           KNGWRVELSHNSKGGGGGGGRRGR    GGGDDLKCYECGEPGHFARECRSRGGSRG GG
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGAGG 120

Query: 195 GLRRSPSPRRRRSPSYERYGRRSNSPRGKRS-PRRRSITPPKRGRSYSRSPPYRHARRAS 254
           GLRRSPSPRRRRSPSYERYGRRSNSPRGKRS PRRRSITPPKRGRSYSRSPP RHARRAS
Sbjct: 121 GLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHARRAS 180

Query: 255 PYANGD 256
           PYANGD
Sbjct: 181 PYANGD 186

[Close]
BLAST of CcUC05G107530 vs. ExPASy TrEMBL
Match: A0A6J1KZV2 (serine/arginine-rich splicing factor RSZ21-like OS=Cucurbita maxima OX=3661 GN=LOC111497790 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 4.2e-91
Identity = 178/188 (94.68%), Postives = 179/188 (95.21%), Query Frame = 0 

Query: 75  MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 134
           MTRVYIGNLDPRVTER+LEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 135 KNGWRVELSHNSKGGGGGGGRRGR------GGGDDLKCYECGEPGHFARECRSRGGSRGV 194
           KNGWRVELSHNSKGGGGGGGRRGR      GGGDDLKCYECGEPGHFARECRSRGGSRG 
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGA 120

Query: 195 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRS-PRRRSITPPKRGRSYSRSPPYRHARR 254
           GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRS PRRRSITPPKRGRSYSRSPP RHARR
Sbjct: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHARR 180

Query: 255 ASPYANGD 256
           ASPYANGD
Sbjct: 181 ASPYANGD 188

[Close]
BLAST of CcUC05G107530 vs. TAIR 10
Match: AT1G23860.1 (RS-containing zinc finger protein 21 )

HSP 1 Score: 253.1 bits (645), Expect = 2.4e-67
Identity = 142/193 (73.58%), Postives = 152/193 (78.76%), Query Frame = 0 

Query: 75  MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 134
           MTRVY+GNLDPRVTER+LEDEF+ FGVLR+VWVARRPPGYAF+EFDD RDALDAI ALD 
Sbjct: 1   MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60

Query: 135 KNGWRVELSHNSKGGGGGGGRRGRGGGDDLKCYECGEPGHFARECRSRGGSRGVGGGLRR 194
           KNGWRVELSH  KGG GGGG R RGG +D KCYECGE GHFARECR     RG G   RR
Sbjct: 61  KNGWRVELSHKDKGGRGGGGGR-RGGIEDSKCYECGELGHFARECR-----RGRGSVRRR 120

Query: 195 SPSPRRRRSPSYERYGRRSNSPRGKRS-PRRRSITPPKRGRSYSRSPPYRHAR------- 254
           SPSPRRRRSP Y  Y RRS SPRG+RS PRRRS+TPP+RGRSYSRSPPYR +R       
Sbjct: 121 SPSPRRRRSPDY-GYARRSISPRGRRSPPRRRSVTPPRRGRSYSRSPPYRGSRRDSPRRR 180

[Close]
BLAST of CcUC05G107530 vs. TAIR 10
Match: AT1G23860.2 (RS-containing zinc finger protein 21 )

HSP 1 Score: 253.1 bits (645), Expect = 2.4e-67
Identity = 142/193 (73.58%), Postives = 152/193 (78.76%), Query Frame = 0 

Query: 75  MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 134
           MTRVY+GNLDPRVTER+LEDEF+ FGVLR+VWVARRPPGYAF+EFDD RDALDAI ALD 
Sbjct: 1   MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60

Query: 135 KNGWRVELSHNSKGGGGGGGRRGRGGGDDLKCYECGEPGHFARECRSRGGSRGVGGGLRR 194
           KNGWRVELSH  KGG GGGG R RGG +D KCYECGE GHFARECR     RG G   RR
Sbjct: 61  KNGWRVELSHKDKGGRGGGGGR-RGGIEDSKCYECGELGHFARECR-----RGRGSVRRR 120

Query: 195 SPSPRRRRSPSYERYGRRSNSPRGKRS-PRRRSITPPKRGRSYSRSPPYRHAR------- 254
           SPSPRRRRSP Y  Y RRS SPRG+RS PRRRS+TPP+RGRSYSRSPPYR +R       
Sbjct: 121 SPSPRRRRSPDY-GYARRSISPRGRRSPPRRRSVTPPRRGRSYSRSPPYRGSRRDSPRRR 180

[Close]
BLAST of CcUC05G107530 vs. TAIR 10
Match: AT1G23860.4 (RS-containing zinc finger protein 21 )

HSP 1 Score: 246.1 bits (627), Expect = 3.0e-65
Identity = 139/193 (72.02%), Postives = 149/193 (77.20%), Query Frame = 0 

Query: 75  MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 134
           MTRVY+GNLDPRVTER+LEDEF+ FGVLR+VWVARRPPGYAF+EFDD RDALDAI ALD 
Sbjct: 1   MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60

Query: 135 KNGWRVELSHNSKGGGGGGGRRGRGGGDDLKCYECGEPGHFARECRSRGGSRGVGGGLRR 194
           KNGWRVELSH  KGG GGGG R RGG +D KCYECGE GHFARECR     RG G   RR
Sbjct: 61  KNGWRVELSHKDKGGRGGGGGR-RGGIEDSKCYECGELGHFARECR-----RGRGSVRRR 120

Query: 195 SPSPRRRRSPSYERYGRRSNSPRGKRS-PRRRSITPPKRGRSYSRSPPYRHAR------- 254
           SPSPRRRRSP Y      S SPRG+RS PRRRS+TPP+RGRSYSRSPPYR +R       
Sbjct: 121 SPSPRRRRSPDY-----GSISPRGRRSPPRRRSVTPPRRGRSYSRSPPYRGSRRDSPRRR 180

[Close]
BLAST of CcUC05G107530 vs. TAIR 10
Match: AT2G24590.1 (RNA recognition motif and CCHC-type zinc finger domains containing protein )

HSP 1 Score: 226.1 bits (575), Expect = 3.2e-59
Identity = 128/192 (66.67%), Postives = 143/192 (74.48%), Query Frame = 0 

Query: 75  MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 134
           M+RVY+GNLDPRVTER+LEDEFR FGV+RSVWVARRPPGYAF++F+D RDA DAI+ +DG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRSFGVIRSVWVARRPPGYAFLDFEDSRDARDAIREVDG 60

Query: 135 KNGWRVELSHNSKGGGGGGGRRGRG------GGDDLKCYECGEPGHFARECRSRGGSRGV 194
           KNGWRVE SHN  GGGG GG RG G      GG DLKCYECGE GHFARECRSRGGS   
Sbjct: 61  KNGWRVEQSHNRGGGGGRGGGRGGGDGGRGRGGSDLKCYECGESGHFARECRSRGGS--- 120

Query: 195 GGGLRRSPS-----PRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYR 254
            GG RRS S     PR R+SP+Y   GRRS SPR +  P  R  +P  RGR+YSRSPP  
Sbjct: 121 -GGRRRSRSRSRSPPRYRKSPTYG--GRRSYSPRARSPPPPRRRSPSPRGRNYSRSPPPY 180

Query: 255 HARRASPYANGD 256
            AR   PYANG+
Sbjct: 181 RARDEVPYANGN 186

[Close]
BLAST of CcUC05G107530 vs. TAIR 10
Match: AT4G31580.1 (serine/arginine-rich 22 )

HSP 1 Score: 226.1 bits (575), Expect = 3.2e-59
Identity = 134/198 (67.68%), Postives = 148/198 (74.75%), Query Frame = 0 

Query: 75  MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 134
           M+RVY+GNLDPRVTER+LEDEFR FGV+RSVWVARRPPGYAF++F+D RDA DAI+ALDG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDG 60

Query: 135 KNGWRVELSHN-------SKGG--GGGGGRRGRGGGDDLKCYECGEPGHFARECRSRGGS 194
           KNGWRVE SHN        +GG  GGGGG RG  GG DLKCYECGE GHFARECR+RGG+
Sbjct: 61  KNGWRVEQSHNRGERGGGGRGGDRGGGGGGRGGRGGSDLKCYECGETGHFARECRNRGGT 120

Query: 195 RGVGGGLRRSPS-----PRRRRSPSYERYGRRSNSPRGKR--SPRRRSIT-PPKRGRSYS 254
                G RRS S     PR RRSPS   YGRRS SPR +    PRRRS + PP RGRSYS
Sbjct: 121 -----GRRRSKSRSRTPPRYRRSPS---YGRRSYSPRARSPPPPRRRSPSPPPARGRSYS 180

Query: 255 RSPPYRHARRASPYANGD 256
           RSPP   AR   PYANG+
Sbjct: 181 RSPPPYRAREEVPYANGN 190

The following BLAST results are available for this feature:
BLAST of CcUC05G107530 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038892593.12.9e-9499.45serine/arginine-rich splicing factor RSZ21 [Benincasa hispida][more]
XP_008446226.12.9e-9496.79PREDICTED: serine/arginine-rich splicing factor RSZ21 [Cucumis melo] >XP_0084462... [more]
XP_011655636.13.8e-9496.28serine/arginine-rich splicing factor RSZ21 [Cucumis sativus] >KAE8648723.1 hypot... [more]
TYK15593.11.9e-9396.77serine/arginine-rich splicing factor RSZ21 isoform X1 [Cucumis melo var. makuwa][more]
XP_022151054.12.4e-9396.69serine/arginine-rich splicing factor RSZ21 [Momordica charantia][more]
BLAST of CcUC05G107530 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O811273.4e-6673.58Serine/arginine-rich splicing factor RSZ21 OS=Arabidopsis thaliana OX=3702 GN=RS... [more]
O811264.5e-5867.68Serine/arginine-rich splicing factor RSZ22 OS=Arabidopsis thaliana OX=3702 GN=RS... [more]
Q9SJA64.5e-5866.67Serine/arginine-rich splicing factor RSZ22A OS=Arabidopsis thaliana OX=3702 GN=R... [more]
Q69KL92.5e-5668.48Serine/arginine-rich splicing factor RSZ21A OS=Oryza sativa subsp. japonica OX=3... [more]
Q6K4N06.1e-5566.67Serine/arginine-rich splicing factor RSZ21 OS=Oryza sativa subsp. japonica OX=39... [more]
BLAST of CcUC05G107530 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BEJ41.4e-9496.79serine/arginine-rich splicing factor RSZ21 OS=Cucumis melo OX=3656 GN=LOC1034890... [more]
A0A5D3CUM79.0e-9496.77Serine/arginine-rich splicing factor RSZ21 isoform X1 OS=Cucumis melo var. makuw... [more]
A0A6J1DBV41.2e-9396.69serine/arginine-rich splicing factor RSZ21 OS=Momordica charantia OX=3673 GN=LOC... [more]
A0A6J1GX572.5e-9195.70serine/arginine-rich splicing factor RSZ21-like OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1KZV24.2e-9194.68serine/arginine-rich splicing factor RSZ21-like OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of CcUC05G107530 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G23860.12.4e-6773.58RS-containing zinc finger protein 21 [more]
AT1G23860.22.4e-6773.58RS-containing zinc finger protein 21 [more]
AT1G23860.43.0e-6572.02RS-containing zinc finger protein 21 [more]
AT2G24590.13.2e-5966.67RNA recognition motif and CCHC-type zinc finger domains containing protein [more]
AT4G31580.13.2e-5967.68serine/arginine-rich 22 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 165..181
e-value: 1.9E-5
score: 34.1
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 165..180
e-value: 1.2E-7
score: 31.5
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 165..181
score: 11.037273
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 77..143
e-value: 7.6E-18
score: 75.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 78..135
e-value: 4.0E-16
score: 58.6
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 76..147
score: 16.107859
NoneNo IPR availableGENE3D4.10.60.10coord: 163..229
e-value: 1.1E-6
score: 30.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..255
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..160
NoneNo IPR availablePANTHERPTHR23147SERINE/ARGININE RICH SPLICING FACTORcoord: 66..253
NoneNo IPR availablePANTHERPTHR23147:SF164SERINE/ARGININE-RICH SPLICING FACTOR RSZ21A-LIKE ISOFORM X1coord: 66..253
NoneNo IPR availableCDDcd12373RRM_SRSF3_likecoord: 77..145
e-value: 3.33292E-37
score: 123.885
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 44..162
e-value: 1.2E-19
score: 72.6
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 74..160
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 158..182

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC05G107530.1CcUC05G107530.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding