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CcUC05G106790 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCGCCAGAAGCTCGCGTACTAGACGCTCGGGTGTTCCTTCAAGGAACATTTCTGACGACCAAATTGCTGATTTGATCTCAAAATTACAGCAGCTCATCCCTGAGATTCGTAATGGACGTTCCTCCTCCAGGGTATTTTATTTCTTCTTTTTCTCTTTCTTTTTCCATTTTTATTATTCCAACTTATATATATATATATATATCTTACTTCATTAACATTAAATGAATTACACATTAAATTTTCAAAAAGTCTATCAGCTTAAGCTGATGTTTGTGTGGACATTAGTTCGGATAGTCAAGTATTGTGTGCTAATAATTTATATAGCCGCTCCCAAGAGGAAGAGAGCGGTTAAGAAGGATGGGTGCGGACTTCGAATCTAAATTCACCCTACATTATTCTCAATTATCTCTCCTTCAAATAGGGGGAAAAAACGCGTTTAACGCCCTCTGTGTTTTAATCACTTTTTAAAATTCAATTCAAAACAATAATGATCTATTCAAACTAATTTCAATAACTAATTTATGAACTTTTAACTCAAATTTCAAATAATATATCAAGCTTTCTTTTCTTCCAAATTTCAACTTTAAAATAAACTAAAAAAGTAGTGTTTTTATAATTTTCATACAAAAAAAAAAAAAAAAAAATGTTATCAAATTAAATGGAGCATTAATTAATTGGGATTAGATGATGAATATAACAATCGTACCCAAAATATTAGTAGATATAACAAAATTTAGATCTATTAATAATAGACTATATCACAGGTAGGAATCTATAAGCATTGTGATAGCGGGTCTATCACTGATAGACTTTGTTATATTTGCGATTCTTTGACAATGTTATTATTTACGTAATTATTGGCCCTAAAAGTATTATAAATGGCAATTACTCTAATCAAAATTTGTGAATGTGCATGGGGGGTTGTTTAGGTATCAGCTTCTAAGGTTCTACAAGAGACTTGCAACTACATAAGAAGCTTACAAAGAGAGGTGGATGATTTAAGCGATCGATTATCGGAGCTATTGGCATCAACAGACCCTGAAAGTGCTCAAGCTGCCATAATTAGAAGCTTACTTATGTAA ATGTCCGCCAGAAGCTCGCGTACTAGACGCTCGGGTGTTCCTTCAAGGAACATTTCTGACGACCAAATTGCTGATTTGATCTCAAAATTACAGCAGCTCATCCCTGAGATTCGTAATGGACGTTCCTCCTCCAGGGTATCAGCTTCTAAGGTTCTACAAGAGACTTGCAACTACATAAGAAGCTTACAAAGAGAGGTGGATGATTTAAGCGATCGATTATCGGAGCTATTGGCATCAACAGACCCTGAAAGTGCTCAAGCTGCCATAATTAGAAGCTTACTTATGTAA ATGTCCGCCAGAAGCTCGCGTACTAGACGCTCGGGTGTTCCTTCAAGGAACATTTCTGACGACCAAATTGCTGATTTGATCTCAAAATTACAGCAGCTCATCCCTGAGATTCGTAATGGACGTTCCTCCTCCAGGGTATCAGCTTCTAAGGTTCTACAAGAGACTTGCAACTACATAAGAAGCTTACAAAGAGAGGTGGATGATTTAAGCGATCGATTATCGGAGCTATTGGCATCAACAGACCCTGAAAGTGCTCAAGCTGCCATAATTAGAAGCTTACTTATGTAA MSARSSRTRRSGVPSRNISDDQIADLISKLQQLIPEIRNGRSSSRVSASKVLQETCNYIRSLQREVDDLSDRLSELLASTDPESAQAAIIRSLLM Homology
BLAST of CcUC05G106790 vs. NCBI nr
Match: XP_038893351.1 (transcription factor PRE6-like [Benincasa hispida]) HSP 1 Score: 170.6 bits (431), Expect = 6.4e-39 Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0
BLAST of CcUC05G106790 vs. NCBI nr
Match: XP_004135185.1 (transcription factor PRE6 [Cucumis sativus] >KGN51900.1 hypothetical protein Csa_009290 [Cucumis sativus]) HSP 1 Score: 165.6 bits (418), Expect = 2.1e-37 Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 0
BLAST of CcUC05G106790 vs. NCBI nr
Match: XP_008446331.1 (PREDICTED: transcription factor PRE6-like [Cucumis melo]) HSP 1 Score: 164.5 bits (415), Expect = 4.6e-37 Identity = 90/95 (94.74%), Postives = 93/95 (97.89%), Query Frame = 0
BLAST of CcUC05G106790 vs. NCBI nr
Match: XP_022151230.1 (transcription factor PRE6-like [Momordica charantia]) HSP 1 Score: 164.1 bits (414), Expect = 6.0e-37 Identity = 90/95 (94.74%), Postives = 93/95 (97.89%), Query Frame = 0
BLAST of CcUC05G106790 vs. NCBI nr
Match: XP_022968308.1 (transcription factor PRE6-like [Cucurbita maxima]) HSP 1 Score: 158.3 bits (399), Expect = 3.3e-35 Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 0
BLAST of CcUC05G106790 vs. ExPASy Swiss-Prot
Match: Q8GW32 (Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 2.0e-27 Identity = 72/93 (77.42%), Postives = 80/93 (86.02%), Query Frame = 0
BLAST of CcUC05G106790 vs. ExPASy Swiss-Prot
Match: Q9LXG5 (Transcription factor PRE2 OS=Arabidopsis thaliana OX=3702 GN=PRE2 PE=1 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 9.3e-25 Identity = 62/90 (68.89%), Postives = 70/90 (77.78%), Query Frame = 0
BLAST of CcUC05G106790 vs. ExPASy Swiss-Prot
Match: B8APB5 (Transcription factor ILI6 OS=Oryza sativa subsp. indica OX=39946 GN=ILI6 PE=3 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 1.2e-24 Identity = 66/95 (69.47%), Postives = 81/95 (85.26%), Query Frame = 0
BLAST of CcUC05G106790 vs. ExPASy Swiss-Prot
Match: Q0DUR2 (Transcription factor ILI6 OS=Oryza sativa subsp. japonica OX=39947 GN=ILI6 PE=1 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 1.2e-24 Identity = 66/95 (69.47%), Postives = 81/95 (85.26%), Query Frame = 0
BLAST of CcUC05G106790 vs. ExPASy Swiss-Prot
Match: Q9CA64 (Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 6.0e-24 Identity = 64/94 (68.09%), Postives = 80/94 (85.11%), Query Frame = 0
BLAST of CcUC05G106790 vs. ExPASy TrEMBL
Match: A0A0A0KQJ7 (Transcription regulator OS=Cucumis sativus OX=3659 GN=Csa_5G604940 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 9.9e-38 Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 0
BLAST of CcUC05G106790 vs. ExPASy TrEMBL
Match: A0A1S3BFH5 (transcription factor PRE6-like OS=Cucumis melo OX=3656 GN=LOC103489101 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 2.2e-37 Identity = 90/95 (94.74%), Postives = 93/95 (97.89%), Query Frame = 0
BLAST of CcUC05G106790 vs. ExPASy TrEMBL
Match: A0A6J1DAM4 (transcription factor PRE6-like OS=Momordica charantia OX=3673 GN=LOC111019204 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 2.9e-37 Identity = 90/95 (94.74%), Postives = 93/95 (97.89%), Query Frame = 0
BLAST of CcUC05G106790 vs. ExPASy TrEMBL
Match: A0A6J1HXN1 (transcription factor PRE6-like OS=Cucurbita maxima OX=3661 GN=LOC111467576 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.6e-35 Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 0
BLAST of CcUC05G106790 vs. ExPASy TrEMBL
Match: A0A6J1G268 (transcription factor PRE6-like OS=Cucurbita moschata OX=3662 GN=LOC111450010 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 2.1e-35 Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 0
BLAST of CcUC05G106790 vs. TAIR 10
Match: AT1G26945.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 122.9 bits (307), Expect = 1.4e-28 Identity = 72/93 (77.42%), Postives = 80/93 (86.02%), Query Frame = 0
BLAST of CcUC05G106790 vs. TAIR 10
Match: AT5G15160.1 (BANQUO 2 ) HSP 1 Score: 114.0 bits (284), Expect = 6.6e-26 Identity = 62/90 (68.89%), Postives = 70/90 (77.78%), Query Frame = 0
BLAST of CcUC05G106790 vs. TAIR 10
Match: AT1G74500.1 (activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 ) HSP 1 Score: 111.3 bits (277), Expect = 4.3e-25 Identity = 64/94 (68.09%), Postives = 80/94 (85.11%), Query Frame = 0
BLAST of CcUC05G106790 vs. TAIR 10
Match: AT3G28857.1 (basic helix-loop-helix (bHLH) DNA-binding family protein ) HSP 1 Score: 107.5 bits (267), Expect = 6.2e-24 Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 0
BLAST of CcUC05G106790 vs. TAIR 10
Match: AT3G47710.1 (BANQUO 3 ) HSP 1 Score: 104.8 bits (260), Expect = 4.0e-23 Identity = 59/95 (62.11%), Postives = 79/95 (83.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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