CcUC05G106740 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTAGCCGGTAGCCCCTCCTCTTAAAAATTCATTTTTCACAAACTTTCCTCTCCTCTCTCTTTTATTTTTCCTTTACAACACAAAACCAAAAAGTATAGAGAAGGTTTGAATTTCAAGTTATGGCTGGTTCCGGGAATTTTCTTCAAGTAGTGGCTAACAACTTCGATGTGCTTGCTCTGTAATCATTTTACCCAATATGCTTTTAATTTATGAACTACATTACTATTATTACTATTATTGCCTTCTCCCAAATTGTGATTTTATTTTTGTTCGCAGGCCTGTGATTTCTCTGGTGTATCCTCTGTAAGTGACAAATACTACAACATTGATAACTACAGCGTTATATATGTTTTTTAATTTCTTGGAGTTGTTGGTTTTTGTTTTAAAATACTATATATATAGGTATGCTTCCATCAAAGCTATAGAGACGAAATCAATAGTGGACGACCAGCAATGGCTCACTTACTGGGTTTTGTACTCTCTCATGACTCTCTTCGAGCTCACATTTGCCAAAATATTAGAAGTGTAAGTACGCTAATCTTTCTGCGTTCAATTGTATGAGCACATTTTGTTATATTATGTTCCACACTACACTTCACTATACTCCATCTACTATTAAAATATTTACTTTTTTTTTTGGGGTGGGGGGGGGGGGGGGGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGTTGCGTTGGTAAACCTACTAACTTCTTACGAATGTTTTTCAAAAATCAAGGGAAAAAAAAATTGAAAACTGTTTTATTTATTTATTTTTATTTTTTTATTTTTAATTTGACTAATAATTTAACTTTTCTACTTGAGAAAAATCAAACCATAGTAAGAGATTGGGAGGAAGTATTTTATAAAGTTGGTTTAATGACTTGAAGCGTGGTAATTTTCACATTAGTCCAGGGTAGAGCCTTTTCCAATATGCAATTTTAAAAGAAACTAAGAAGAAGTAAGTTTAATTTTTAAACACACAAAATTAAATGGTTACCAAATGAGATTTAAATAAATCAAACAATATTTAAACCATGTTATTTGATTTTATATATAATATTAATTAGGATATGTTTAATATAATTAAATTTATCATAATCCAATAATTTATAAGTAACATGATATAAAAAAGAGATTTTATGTTCTAATCCTTATTAATAATATTAACTTCTACTCAAATGAAATTAAAAGTATTGAAATATTGATAAAATTAAATTTAGCACAATACGTGGTAAGCTTAATGAAACTTGTTATATTTGTCTGTTTATGCAAATATTTTTGCAGGGTAGCCATCTGGCCATATGTGAAACTAATAATAATGAGTTGGCTAGTTCTACCACACTTCAATGGAGCAGCACATGTTTACAAAAACTTCATTAGGCCACACTATATGAACCCTCAAACTTCTACGCTATGGTACATTCCTCGAAAGACCAAACATATTTTCAGTACCCAAGATGATGTGTTAACTGCTGCTGAAAAGTACATGGAAGAGCATGGAACTGAAGCTTTCGAAAGGCTTATGTATAAGGTCTGTCTGCCTAAATTAAATGAAAAATACTCTTATATATTACAGTCCACATATATAACTGATATGATCTTAGAATATATATGATCCTGATATAATTATTATTTTGTGAACTTTAGCAGGCTGAAAGAGAGAGTTCGAGGAGGAACAACAATTACATGATTTTCGATGATGATTATGCATATTGAAACTCTCCATCTATATCTATATGTAATCTACTACTAAATAATTGCGTCTATTTTGATTTAGTATATCAAGGGAGTCCATTCAACAAGACGTGTTTAGTAGTTTGCAATTCTCTTTTTGTGTATTGAAATATGTACTCTCGCTAATGTGACTGTTTGTGCAAAAAATTAAAAC ATTAGCCGGTAGCCCCTCCTCTTAAAAATTCATTTTTCACAAACTTTCCTCTCCTCTCTCTTTTATTTTTCCTTTACAACACAAAACCAAAAAGTATAGAGAAGGTTTGAATTTCAAGTTATGGCTGGTTCCGGGAATTTTCTTCAAGTAGTGGCTAACAACTTCGATGTGCTTGCTCTGCCTGTGATTTCTCTGGTGTATCCTCTGTATGCTTCCATCAAAGCTATAGAGACGAAATCAATAGTGGACGACCAGCAATGGCTCACTTACTGGGTTTTGTACTCTCTCATGACTCTCTTCGAGCTCACATTTGCCAAAATATTAGAAGTGGTAGCCATCTGGCCATATGTGAAACTAATAATAATGAGTTGGCTAGTTCTACCACACTTCAATGGAGCAGCACATGTTTACAAAAACTTCATTAGGCCACACTATATGAACCCTCAAACTTCTACGCTATGGTACATTCCTCGAAAGACCAAACATATTTTCAGTACCCAAGATGATGTGTTAACTGCTGCTGAAAAGTACATGGAAGAGCATGGAACTGAAGCTTTCGAAAGGCTTATGTATAAGCAGGCTGAAAGAGAGAGTTCGAGGAGGAACAACAATTACATGATTTTCGATGATGATTATGCATATTGAAACTCTCCATCTATATCTATATGTAATCTACTACTAAATAATTGCGTCTATTTTGATTTAGTATATCAAGGGAGTCCATTCAACAAGACGTGTTTAGTAGTTTGCAATTCTCTTTTTGTGTATTGAAATATGTACTCTCGCTAATGTGACTGTTTGTGCAAAAAATTAAAAC ATGGCTGGTTCCGGGAATTTTCTTCAAGTAGTGGCTAACAACTTCGATGTGCTTGCTCTGCCTGTGATTTCTCTGGTGTATCCTCTGTATGCTTCCATCAAAGCTATAGAGACGAAATCAATAGTGGACGACCAGCAATGGCTCACTTACTGGGTTTTGTACTCTCTCATGACTCTCTTCGAGCTCACATTTGCCAAAATATTAGAAGTGGTAGCCATCTGGCCATATGTGAAACTAATAATAATGAGTTGGCTAGTTCTACCACACTTCAATGGAGCAGCACATGTTTACAAAAACTTCATTAGGCCACACTATATGAACCCTCAAACTTCTACGCTATGGTACATTCCTCGAAAGACCAAACATATTTTCAGTACCCAAGATGATGTGTTAACTGCTGCTGAAAAGTACATGGAAGAGCATGGAACTGAAGCTTTCGAAAGGCTTATGTATAAGCAGGCTGAAAGAGAGAGTTCGAGGAGGAACAACAATTACATGATTTTCGATGATGATTATGCATATTGA MAGSGNFLQVVANNFDVLALPVISLVYPLYASIKAIETKSIVDDQQWLTYWVLYSLMTLFELTFAKILEVVAIWPYVKLIIMSWLVLPHFNGAAHVYKNFIRPHYMNPQTSTLWYIPRKTKHIFSTQDDVLTAAEKYMEEHGTEAFERLMYKQAERESSRRNNNYMIFDDDYAY Homology
BLAST of CcUC05G106740 vs. NCBI nr
Match: XP_008446335.1 (PREDICTED: HVA22-like protein c isoform X1 [Cucumis melo]) HSP 1 Score: 339.7 bits (870), Expect = 1.5e-89 Identity = 168/172 (97.67%), Postives = 170/172 (98.84%), Query Frame = 0
BLAST of CcUC05G106740 vs. NCBI nr
Match: XP_038893172.1 (HVA22-like protein c isoform X1 [Benincasa hispida]) HSP 1 Score: 337.4 bits (864), Expect = 7.2e-89 Identity = 168/172 (97.67%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of CcUC05G106740 vs. NCBI nr
Match: XP_004135181.1 (HVA22-like protein c isoform X1 [Cucumis sativus] >KGN51905.1 hypothetical protein Csa_008962 [Cucumis sativus]) HSP 1 Score: 334.0 bits (855), Expect = 8.0e-88 Identity = 166/172 (96.51%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of CcUC05G106740 vs. NCBI nr
Match: XP_008446336.1 (PREDICTED: HVA22-like protein c isoform X2 [Cucumis melo]) HSP 1 Score: 333.2 bits (853), Expect = 1.4e-87 Identity = 167/172 (97.09%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of CcUC05G106740 vs. NCBI nr
Match: XP_038893173.1 (HVA22-like protein c isoform X2 [Benincasa hispida]) HSP 1 Score: 330.9 bits (847), Expect = 6.8e-87 Identity = 167/172 (97.09%), Postives = 168/172 (97.67%), Query Frame = 0
BLAST of CcUC05G106740 vs. ExPASy Swiss-Prot
Match: Q9S784 (HVA22-like protein c OS=Arabidopsis thaliana OX=3702 GN=HVA22C PE=2 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 5.8e-57 Identity = 112/180 (62.22%), Postives = 142/180 (78.89%), Query Frame = 0
BLAST of CcUC05G106740 vs. ExPASy Swiss-Prot
Match: Q9S7V4 (HVA22-like protein a OS=Arabidopsis thaliana OX=3702 GN=HVA22A PE=2 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 1.5e-49 Identity = 95/171 (55.56%), Postives = 136/171 (79.53%), Query Frame = 0
BLAST of CcUC05G106740 vs. ExPASy Swiss-Prot
Match: Q9SYX7 (HVA22-like protein b OS=Arabidopsis thaliana OX=3702 GN=HVA22B PE=2 SV=2) HSP 1 Score: 148.3 bits (373), Expect = 8.1e-35 Identity = 77/173 (44.51%), Postives = 115/173 (66.47%), Query Frame = 0
BLAST of CcUC05G106740 vs. ExPASy Swiss-Prot
Match: Q682H0 (HVA22-like protein f OS=Arabidopsis thaliana OX=3702 GN=HVA22F PE=2 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 3.1e-26 Identity = 63/157 (40.13%), Postives = 101/157 (64.33%), Query Frame = 0
BLAST of CcUC05G106740 vs. ExPASy Swiss-Prot
Match: Q9FED2 (HVA22-like protein e OS=Arabidopsis thaliana OX=3702 GN=HVA22E PE=2 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 5.7e-20 Identity = 47/88 (53.41%), Postives = 62/88 (70.45%), Query Frame = 0
BLAST of CcUC05G106740 vs. ExPASy TrEMBL
Match: A0A1S3BEU0 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103489106 PE=3 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 7.0e-90 Identity = 168/172 (97.67%), Postives = 170/172 (98.84%), Query Frame = 0
BLAST of CcUC05G106740 vs. ExPASy TrEMBL
Match: A0A0A0KQK2 (HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G604990 PE=3 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 3.9e-88 Identity = 166/172 (96.51%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of CcUC05G106740 vs. ExPASy TrEMBL
Match: A0A1S3BFI0 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103489106 PE=3 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 6.6e-88 Identity = 167/172 (97.09%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of CcUC05G106740 vs. ExPASy TrEMBL
Match: A0A6J1HX10 (HVA22-like protein OS=Cucurbita maxima OX=3661 GN=LOC111467434 PE=3 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 4.4e-84 Identity = 156/172 (90.70%), Postives = 165/172 (95.93%), Query Frame = 0
BLAST of CcUC05G106740 vs. ExPASy TrEMBL
Match: A0A6J1FZG8 (HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449339 PE=3 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 4.4e-84 Identity = 156/172 (90.70%), Postives = 165/172 (95.93%), Query Frame = 0
BLAST of CcUC05G106740 vs. TAIR 10
Match: AT1G69700.1 (HVA22 homologue C ) HSP 1 Score: 221.9 bits (564), Expect = 4.1e-58 Identity = 112/180 (62.22%), Postives = 142/180 (78.89%), Query Frame = 0
BLAST of CcUC05G106740 vs. TAIR 10
Match: AT1G74520.1 (HVA22 homologue A ) HSP 1 Score: 197.2 bits (500), Expect = 1.1e-50 Identity = 95/171 (55.56%), Postives = 136/171 (79.53%), Query Frame = 0
BLAST of CcUC05G106740 vs. TAIR 10
Match: AT5G62490.1 (HVA22 homologue B ) HSP 1 Score: 148.3 bits (373), Expect = 5.8e-36 Identity = 77/173 (44.51%), Postives = 115/173 (66.47%), Query Frame = 0
BLAST of CcUC05G106740 vs. TAIR 10
Match: AT2G42820.1 (HVA22-like protein F ) HSP 1 Score: 119.8 bits (299), Expect = 2.2e-27 Identity = 63/157 (40.13%), Postives = 101/157 (64.33%), Query Frame = 0
BLAST of CcUC05G106740 vs. TAIR 10
Match: AT5G50720.1 (HVA22 homologue E ) HSP 1 Score: 99.0 bits (245), Expect = 4.0e-21 Identity = 47/88 (53.41%), Postives = 62/88 (70.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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