CcUC05G106720 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGCACTTGCTGGGGTTTCCTATATAAATACGGCGCGGCCTTTCGAAACTTCCACAGCTACGGTGAAGCTTCGTACTTTGACAAGGTACAATTGTTCCTTTGTAAACAACAATATTTGTTTCTGTTCGACTGTTTTTCCCATTATTCCAACATTGAATCATAGCGCTTTCAAAACATGCTCGTTATCTTCTTTGAACGTAGGAGAATCTTGGGTTTTGGTTAAAATGCCGGCAGATTTCTCTTCCGAGCGTGGTCTGTTCGGGGGCGCTATAGTTAGCACATTCCCTCTTAGATTCCAGGTTTGTCTTCTTTAATTGCGATTCTGTCTCTTTCCCTTTTGTTGTATCACTTTTTTGTCTTTATTTATCCATGAAATTTATATATTTAACTCATGATTATTTTAACTCTAGGACGTAAGCAACATCCGTCAAGTCCCTGATCATCAGGTTGGTAGGCATTTGATGCTTCTATGAAGATAGTTGAGGTTATTTTATAATAAAGCCACGGAGTTTGCAAAATAACTAAAGTTTTTCTTTTCCTTCTTTTTTAAATATATGTGGTGGGTTCAAAGGAAGTGTTTGTGGATCCATCTCGGGATGAAAGCTTGATCTTTGAGCTTTTAGATTTTAAGCATGATGTTGGTGACAATGGAAGTGCTGTTTGGTTCCTTCAAGACCTTGCCACTGAGCAGAATGCTGAGGGAAGGGTGGTAATCTTACTTTTACTTTATTGTATTTTCCTCTCCCCTTGCTTAATGCCTGCTCTGTCTGCTGTTAGTTGAACATCCAAGTATTAACTAGTGAGCAACAATGTTAGATGGGTTCGCTTGTTTTAGCTATTAAGTACTTAGTTAGAGAGTGTGTGTTGTTTATGGGGGCTATCAGATATGTTTGATGCAGTTATTTGTCTAGTAATGTGAGACAGTTTGTATTGGAATATCACAAAGAAACTACTATCTTTCTTTTGGTTGCAAACTTTGGGAACGTGAGAAACAACACTCTGTGTGTGGACTAATGCAGTCCCTTGCTCAAGTACGTACTACTTAAAACTATCAACATAATTTGTTTTTTTTTATTTGTGGTGGTATTAGAGAAATAACCCACGGGGTCGGATCATTTAATCATACATAATATCCAGTCTGATAAAAATTTGCTGCCTACTTGTGTGTGAGGGAAAGGAGTTATGTGATCAAATATAGAAAGAACTTTTTCTATCATGAGTAGTAGATGAGTAATTGGGAATTAGGATTACTGTTTTTATCTTTTTCAATACAGGCATCGTTTCTTGCTGTAGATATAGTCCTTGGTCTATCTTGTAAGTTTAATTTCAAAAGATGGATGCCACATGATATGCAGTCAGATGTTATGGGTTAACTCAAAGCACAGTCATGTTTTGTTAGTAGTTCTGCCTTATGTCCCACTGACGAATTGCTTTGAAGCTTTTGTGAATCCCTTTAGATTTTATCTGTAAAAAAATCTTTGCTTCCTTGTTTCGTTTCTTTGTATTTATCGTCTCTTCTTGCAATGCATACCAGCACATATGTAATGATACTCTGAACTTGAGCTCTTGATGCTACATGATTTTGTGGAATCATATCTTCTGTTTTACTTTTACTTATCTTGCCATATTTCTCCAGGTGATTGAGCAATCTGGAGTGATCGATGCACCTGGATTGTGCTATGGAAATGTACCTTCTGTAGTTACAACTGCCGTTGGCCAAATGGTATGTGCCGCTGATGTGTGTGGTTGTGTATCAATTACATGAGTGGTTGAATATTTCAGCTTCAAAACACTTGCTTCTTGCCATCGCACTTAACTTTGTAGTTTTCTCGTTTCTGATATCATTCTTCATTCTTTGGATGAGAGATATCATTCTTCATAATAATACTAATTTTACTTCCTGTTGAGTTCTATCTGGAAAATTTGCATGCTTGGTATTGTTTATCATGGCCTTCAACTCCAACCATTAGTAATCAAATTACAAATTTGCCCTGTTTGTATGTCTTGGGTTAGTTTCTTCTGTTTTTATATGCATTTTATGGATCGCTAATTTCGAACTGTTCAGCTGAGACACATATCTCATGAACAAAATGAAAGATAGAAGTAGAGGGAAGAAGAAGATAACAGTTAATAATCAAATAAGCTTCAGTAAGGGATTTCTGAAGGAAAAATAGATTCCCCCCACCCCTTACCCTCCTCCCAAAAAAAATCCCCCTGGGAAGTCTTTAAGTTCCCTCTGTAGCTCTAACTTGTGGAAAGTAACGCATTGAGAATCACATGCCTTTGTTATAATTACAAAATAAATAAATTATAACAACGTACTAACAAAAGGATCACATGGCACGTACTGTTTCATTTAATTGACACAAATCTCTCTAGAAAATTGTCTTTCTTTTTCATTCGGAATGAATCATTTTCCATACTTTCTATTATATCTTGCATAGTTCTTTCGGTTTAAATTTTTTGGGTTGATGTATCTGCTAGATATACTAGGCTTGTCAAAATTTTGTTGTTAGTTTGTAAATGAAGGTCACTTAGATATCAGTTGAACTTCGATCCAGTCCCTGTTTCCATGAATTTCTTTCCAGTTTTCGTGCTCAATTGTTGGCTGTTGTTATGGTTACAAATTTCCATGACTTTATCATGCCCTTTCTTCTCTTTTTATTCAATGGGTTTTGTTTCTGTCTGTGTAGGCAATTTCAAAGGGCCGGCAAGGAAGAGAAGCTCAAAATATTGTCAGGGTAACCTCTCTTATTTTCTTTACCCTTGTGCTTTGGTGTTTCCCAATGCTTTATAAGATAAATCTGTTTATTACTTTATGCAGGTATATTTGGCGAATCTACGTCTTAAAGGAGTTGCTACTGACGTGCTAATCTCTGCATATGAACCCATAGTCATAAAGTGAGTAATTACTCTCCAATAAAAGGAAAAACGAACAATCAGTACAATTCTAAGTGAAATACACTGTTAGAGTTGGAAGGAATGGGAAAAGAAAAGGAACTCCAGTCTTCTAAGAGTGATGGCCCTCTCCCTTATAGTCTGCTTAGATGCATAATGCGTACTATTTACATCACCACCTCACACGCATTTCCCTTGACAAACTTATTTATGGGGCTCACATTCCCCTCACTACAAAAGATACCTCCATGATGCAACAAATTTGGCATGGTCCTCATGTTTTTTCTTCTTGTGTATTGAAGCGTATGGGACTTAGATGTATCCTATCACTATCAGTTATCACTAATCACTACCCCTAGCCCTCACACTTTCACTTTGGCCAACCTCAACTGTGAAACATAAAATATTGGGTTATAGTAGTTGTGGAAGGGACCTCCTAGTGATAGGCAACCTTACCAACTCTCATACATATAGGATTAGGACCATACTAATGTAGGGGGTATGTTATCATTCTCCTTCTTGCCACTGGCCTCTGTCTTCGATCTTTTGAAATTGCTAGCTCTCTTCATACAGTCTACTTGCATGCATAATCCATACTTATGTATATCCCTCCAGATATACACTCCCCTAATAGGGTCCCCTGCCCTCGTCACTATGAAAGAAACCTACCATACGCATAACTAACTTGAAAGCTAAATAGCTAATTATCCTCTGTTTTCTTTTTGTACATGAAACATATGGGGAATTTTACTTATCCATATTGAACTTTTTTGCGTGTTCTTAATTTGAAATTTAAGATTTGTTACTATCTGTCCTATGCTAAATCATATATTCATAGCTTAAATTGATTTGCTGTACATCATAGAATAATGCATGCAACGCTTTCTTTTTACAATGTTGATTGGTTCCTTTACCACCAAGGTTAATAGCCCAAATTTAACTGTTAAGGTCTAGTACAAGAAAACATGATACTGAGAAACTCGAGAAAACGTATTGAGATGGATCTCGGAAGGATGATTGACCGTTTCAGTCATTTTGTAGGGTGATAAGGGCCAAAGCAGAACCGTCCATTTTAGTTGGCCAACTTGGCTAAGTTACCTTTTTATATCTGGCCCTGTCTGAAGCAAAGCCCATTTTCTTACCTCCTCGCAAATCACAACCCAAATAGAAAACAAGTGTCCAGCTAGCATAGCAGATCTTTCTTTTACCTGTCACTAGTAATTCTAACGCCTATAATTGTGCTACATTGTTGTGGTTGCAGTCCTTTGAGCGAAAGTGCTAGCTCAGTTGGTTCTGGTTTGGCCACTCCTGCCTCACAATCCGGATGCATGCCAATGGCTGAGGTATTCAAACTTGCAGTCTCCAGCTTTAAAGTCTATGACTGGAGCCTTTTCGGCCCGCCTGCCTAATCTGTTGAAAGAGGAGATAATCTTGTGATCGTCGTTCATTCTTATTTCATTTGGATGTTAAAAGTAGCTAGCTAGCTAAGGTCAGTCTGTTATGTTACATTGGCAAATGTTCCGGCTGCTCTCTTCAGTTGGAAATTGTTGGTAGAGGTTTTAGGGCTGTCATTGTTGTTGGGTTTTGATTTGTACACAATGGGAAGTTGAAAATATGAAGTAGCAAATGTGAATGGTTGAAGTGAATAGCAGCAATCCCCTTTAAGGTAGACAAAATAGAACAAGCATTAGCTGTGTGTAGTAGGACCCCATATTTTTGCATCAGTCAATCACGTGGCAAACAAAA ATGGACGCACTTGCTGGGGTTTCCTATATAAATACGGCGCGGCCTTTCGAAACTTCCACAGCTACGGTGAAGCTTCGTACTTTGACAAGGTACAATTGTTCCTTTGTAAACAACAATATTTGTTTCTGTTCGACTGTTTTTCCCATTATTCCAACATTGAATCATAGCGCTTTCAAAACATGCTCGTTATCTTCTTTGAACGTAGGAGAATCTTGGGTTTTGGTTAAAATGCCGGCAGATTTCTCTTCCGAGCGTGGTCTGTTCGGGGGCGCTATAGTTAGCACATTCCCTCTTAGATTCCAGGACGTAAGCAACATCCGTCAAGTCCCTGATCATCAGGAAGTGTTTGTGGATCCATCTCGGGATGAAAGCTTGATCTTTGAGCTTTTAGATTTTAAGCATGATGTTGGTGACAATGGAAGTGCTGTTTGGTTCCTTCAAGACCTTGCCACTGAGCAGAATGCTGAGGGAAGGGTGGTGATTGAGCAATCTGGAGTGATCGATGCACCTGGATTGTGCTATGGAAATGTACCTTCTGTAGTTACAACTGCCGTTGGCCAAATGGCAATTTCAAAGGGCCGGCAAGGAAGAGAAGCTCAAAATATTGTCAGGGTATATTTGGCGAATCTACGTCTTAAAGGAGTTGCTACTGACGTGCTAATCTCTGCATATGAACCCATAGTCATAAATCCTTTGAGCGAAAGTGCTAGCTCAGTTGGTTCTGGTTTGGCCACTCCTGCCTCACAATCCGGATGCATGCCAATGGCTGAGGTATTCAAACTTGCAGTCTCCAGCTTTAAAGTCTATGACTGGAGCCTTTTCGGCCCGCCTGCCTAATCTGTTGAAAGAGGAGATAATCTTGTGATCGTCGTTCATTCTTATTTCATTTGGATGTTAAAAGTAGCTAGCTAGCTAAGGTCAGTCTGTTATGTTACATTGGCAAATGTTCCGGCTGCTCTCTTCAGTTGGAAATTGTTGGTAGAGGTTTTAGGGCTGTCATTGTTGTTGGGTTTTGATTTGTACACAATGGGAAGTTGAAAATATGAAGTAGCAAATGTGAATGGTTGAAGTGAATAGCAGCAATCCCCTTTAAGGTAGACAAAATAGAACAAGCATTAGCTGTGTGTAGTAGGACCCCATATTTTTGCATCAGTCAATCACGTGGCAAACAAAA ATGGACGCACTTGCTGGGGTTTCCTATATAAATACGGCGCGGCCTTTCGAAACTTCCACAGCTACGGTGAAGCTTCGTACTTTGACAAGGTACAATTGTTCCTTTGTAAACAACAATATTTGTTTCTGTTCGACTGTTTTTCCCATTATTCCAACATTGAATCATAGCGCTTTCAAAACATGCTCGTTATCTTCTTTGAACGTAGGAGAATCTTGGGTTTTGGTTAAAATGCCGGCAGATTTCTCTTCCGAGCGTGGTCTGTTCGGGGGCGCTATAGTTAGCACATTCCCTCTTAGATTCCAGGACGTAAGCAACATCCGTCAAGTCCCTGATCATCAGGAAGTGTTTGTGGATCCATCTCGGGATGAAAGCTTGATCTTTGAGCTTTTAGATTTTAAGCATGATGTTGGTGACAATGGAAGTGCTGTTTGGTTCCTTCAAGACCTTGCCACTGAGCAGAATGCTGAGGGAAGGGTGGTGATTGAGCAATCTGGAGTGATCGATGCACCTGGATTGTGCTATGGAAATGTACCTTCTGTAGTTACAACTGCCGTTGGCCAAATGGCAATTTCAAAGGGCCGGCAAGGAAGAGAAGCTCAAAATATTGTCAGGGTATATTTGGCGAATCTACGTCTTAAAGGAGTTGCTACTGACGTGCTAATCTCTGCATATGAACCCATAGTCATAAATCCTTTGAGCGAAAGTGCTAGCTCAGTTGGTTCTGGTTTGGCCACTCCTGCCTCACAATCCGGATGCATGCCAATGGCTGAGGTATTCAAACTTGCAGTCTCCAGCTTTAAAGTCTATGACTGGAGCCTTTTCGGCCCGCCTGCCTAA MDALAGVSYINTARPFETSTATVKLRTLTRYNCSFVNNNICFCSTVFPIIPTLNHSAFKTCSLSSLNVGESWVLVKMPADFSSERGLFGGAIVSTFPLRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQNAEGRVVIEQSGVIDAPGLCYGNVPSVVTTAVGQMAISKGRQGREAQNIVRVYLANLRLKGVATDVLISAYEPIVINPLSESASSVGSGLATPASQSGCMPMAEVFKLAVSSFKVYDWSLFGPPA Homology
BLAST of CcUC05G106720 vs. NCBI nr
Match: KAG6601426.1 (putative ran guanine nucleotide release factor, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 382.5 bits (981), Expect = 3.1e-102 Identity = 206/270 (76.30%), Postives = 214/270 (79.26%), Query Frame = 0
BLAST of CcUC05G106720 vs. NCBI nr
Match: XP_038892350.1 (ran guanine nucleotide release factor [Benincasa hispida]) HSP 1 Score: 379.4 bits (973), Expect = 2.6e-101 Identity = 192/202 (95.05%), Postives = 196/202 (97.03%), Query Frame = 0
BLAST of CcUC05G106720 vs. NCBI nr
Match: XP_004135179.1 (ran guanine nucleotide release factor [Cucumis sativus] >KGN51907.1 hypothetical protein Csa_008794 [Cucumis sativus]) HSP 1 Score: 365.9 bits (938), Expect = 3.0e-97 Identity = 186/202 (92.08%), Postives = 191/202 (94.55%), Query Frame = 0
BLAST of CcUC05G106720 vs. NCBI nr
Match: XP_008446339.1 (PREDICTED: probable ran guanine nucleotide release factor [Cucumis melo]) HSP 1 Score: 362.8 bits (930), Expect = 2.6e-96 Identity = 183/202 (90.59%), Postives = 191/202 (94.55%), Query Frame = 0
BLAST of CcUC05G106720 vs. NCBI nr
Match: XP_023552843.1 (probable ran guanine nucleotide release factor [Cucurbita pepo subsp. pepo]) HSP 1 Score: 358.6 bits (919), Expect = 4.8e-95 Identity = 181/199 (90.95%), Postives = 188/199 (94.47%), Query Frame = 0
BLAST of CcUC05G106720 vs. ExPASy Swiss-Prot
Match: A3KPP3 (Ran guanine nucleotide release factor OS=Danio rerio OX=7955 GN=rangrf PE=2 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 6.1e-16 Identity = 65/197 (32.99%), Postives = 100/197 (50.76%), Query Frame = 0
BLAST of CcUC05G106720 vs. ExPASy Swiss-Prot
Match: Q54ML6 (Probable ran guanine nucleotide release factor OS=Dictyostelium discoideum OX=44689 GN=mog1 PE=3 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 6.1e-16 Identity = 60/196 (30.61%), Postives = 106/196 (54.08%), Query Frame = 0
BLAST of CcUC05G106720 vs. ExPASy Swiss-Prot
Match: Q9HD47 (Ran guanine nucleotide release factor OS=Homo sapiens OX=9606 GN=RANGRF PE=1 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.5e-11 Identity = 58/190 (30.53%), Postives = 93/190 (48.95%), Query Frame = 0
BLAST of CcUC05G106720 vs. ExPASy Swiss-Prot
Match: Q32PE2 (Ran guanine nucleotide release factor OS=Bos taurus OX=9913 GN=RANGRF PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.5e-11 Identity = 60/191 (31.41%), Postives = 92/191 (48.17%), Query Frame = 0
BLAST of CcUC05G106720 vs. ExPASy Swiss-Prot
Match: O75002 (Nuclear import protein mog1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mog1 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.2e-10 Identity = 55/193 (28.50%), Postives = 92/193 (47.67%), Query Frame = 0
BLAST of CcUC05G106720 vs. ExPASy TrEMBL
Match: A0A0A0KU01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605010 PE=3 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 1.5e-97 Identity = 186/202 (92.08%), Postives = 191/202 (94.55%), Query Frame = 0
BLAST of CcUC05G106720 vs. ExPASy TrEMBL
Match: A0A1S3BEU3 (probable ran guanine nucleotide release factor OS=Cucumis melo OX=3656 GN=LOC103489108 PE=3 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 1.2e-96 Identity = 183/202 (90.59%), Postives = 191/202 (94.55%), Query Frame = 0
BLAST of CcUC05G106720 vs. ExPASy TrEMBL
Match: A0A6J1JJW2 (probable ran guanine nucleotide release factor OS=Cucurbita maxima OX=3661 GN=LOC111485103 PE=3 SV=1) HSP 1 Score: 357.5 bits (916), Expect = 5.2e-95 Identity = 181/199 (90.95%), Postives = 188/199 (94.47%), Query Frame = 0
BLAST of CcUC05G106720 vs. ExPASy TrEMBL
Match: A0A6J1DAG6 (probable ran guanine nucleotide release factor OS=Momordica charantia OX=3673 GN=LOC111019159 PE=3 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 2.0e-94 Identity = 182/202 (90.10%), Postives = 190/202 (94.06%), Query Frame = 0
BLAST of CcUC05G106720 vs. ExPASy TrEMBL
Match: A0A6J1GZ86 (probable ran guanine nucleotide release factor OS=Cucurbita moschata OX=3662 GN=LOC111458863 PE=3 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 2.6e-94 Identity = 179/199 (89.95%), Postives = 186/199 (93.47%), Query Frame = 0
BLAST of CcUC05G106720 vs. TAIR 10
Match: AT1G69680.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein ) HSP 1 Score: 293.1 bits (749), Expect = 2.3e-79 Identity = 147/202 (72.77%), Postives = 172/202 (85.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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