CcUC05G106670 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G106670
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	glutathione S-transferase U10-like
Location	CicolChr05: 33758232 .. 33759244 (-)
RNA-Seq Expression	CcUC05G106670
Synteny	CcUC05G106670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGTGTTGTTTGGAACGTGGTATAGTTCATACTGCACTAGAATTGTGCTAGCACTAAAAATCAAAGGCATCAAGTTTGAGTATGTGGAAGAAGATTTAGCAAATAAGAGTGAATTGCTTCTCCAGTACAATCCAGTTCATCAAAAAGTCCCAGTACTCGTCCATAAAGGAAGGCCAATTGCAGAGTCCTTTGTCATTCTTGAATACATAGAAGAAAATTGGAACTACCATCCCAAAATTCTACCTGATCACCCATATGAAAGAGCCAAAGTTCGCTTCTGGGCGCAATTCTATGATCAAAAGGTTTGATCTTGCACTAACTAATCCTCAAGTTATTCAATCTATTTTTCTCCCCTTTATTATTTTTCATCGCAACTCAGAGGAATGCTCCGTTTTTATGATATTCAGATTCTACTAGGCGCCTTGCCCATCCTCAAATCCAAAGGAGAAGAAAGAGAGAGAGAGCTGTTGAGGAGCAATCAAAAATGATAAGGGTGTTTGAAGAAGGAACGAAGAAAGATTTTCCTGGAAAATTTCCCTTTTACCAAGGAAGAAACTTGGGACTTCTTGATATAGTTGTAGGGCCTAATGCTTGCAACTATTTGGCATTGCGCGAGGTTGTTGGAGATGTAATTGACTCAAAAAGAAACCCTGATTTTTTCTCATGGGTGGATGCTTTGAAGGGACATCCTCTGATTAAGGAAACGCTTCCTCCTCACCATAAGATGGTACACAAACTGAAAGAGAAGATCCATCTAAAGCCTAAAGATAGCTAAACCACCACCAGATGAATCAGATGAAAGAATAATAATGCAGTTCATTAGTTTAAGACTACATTACGAACCAATGCATGAACATATGAATATATGAAAATATGAATATGTGTGAGGGTGTGTTTTTGTTCATAAATAAAAATCATGTGCGAAGGAGTTTCAAGAGTGATGTGATTTGTTTCATCAATTTATATATGCATAAGGATCAGAATGCATGATAAATAGGATCATGTTTGAT

mRNA sequence

ATGTGGTGTTGTTTGGAACGTGATTCTACTAGGCGCCTTGCCCATCCTCAAATCCAAAGGAGAAGAAAGAGAGAGAGAGCTGTTGAGGAGCAATCAAAAATGATAAGGGTGTTTGAAGAAGGAACGAAGAAAGATTTTCCTGGAAAATTTCCCTTTTACCAAGGAAGAAACTTGGGACTTCTTGATATAGTTGTAGGGCCTAATGCTTGCAACTATTTGGCATTGCGCGAGGTTGTTGGAGATGTAATTGACTCAAAAAGAAACCCTGATTTTTTCTCATGGGTGGATGCTTTGAAGGGACATCCTCTGATTAAGGAAACGCTTCCTCCTCACCATAAGATGGTACACAAACTGAAAGAGAAGATCCATCTAAAGCCTAAAGATAGCTAAACCACCACCAGATGAATCAGATGAAAGAATAATAATGCAGTTCATTAGTTTAAGACTACATTACGAACCAATGCATGAACATATGAATATATGAAAATATGAATATGTGTGAGGGTGTGTTTTTGTTCATAAATAAAAATCATGTGCGAAGGAGTTTCAAGAGTGATGTGATTTGTTTCATCAATTTATATATGCATAAGGATCAGAATGCATGATAAATAGGATCATGTTTGAT

Coding sequence (CDS)

ATGTGGTGTTGTTTGGAACGTGATTCTACTAGGCGCCTTGCCCATCCTCAAATCCAAAGGAGAAGAAAGAGAGAGAGAGCTGTTGAGGAGCAATCAAAAATGATAAGGGTGTTTGAAGAAGGAACGAAGAAAGATTTTCCTGGAAAATTTCCCTTTTACCAAGGAAGAAACTTGGGACTTCTTGATATAGTTGTAGGGCCTAATGCTTGCAACTATTTGGCATTGCGCGAGGTTGTTGGAGATGTAATTGACTCAAAAAGAAACCCTGATTTTTTCTCATGGGTGGATGCTTTGAAGGGACATCCTCTGATTAAGGAAACGCTTCCTCCTCACCATAAGATGGTACACAAACTGAAAGAGAAGATCCATCTAAAGCCTAAAGATAGCTAA

Protein sequence

MWCCLERDSTRRLAHPQIQRRRKRERAVEEQSKMIRVFEEGTKKDFPGKFPFYQGRNLGLLDIVVGPNACNYLALREVVGDVIDSKRNPDFFSWVDALKGHPLIKETLPPHHKMVHKLKEKIHLKPKDS

Homology

[Close]

BLAST of CcUC05G106670 vs. NCBI nr
Match: XP_008446345.1 (PREDICTED: glutathione S-transferase U10-like [Cucumis melo] >KAA0034414.1 glutathione S-transferase U10-like [Cucumis melo var. makuwa] >TYK17719.1 glutathione S-transferase U10-like [Cucumis melo var. makuwa])

HSP 1 Score: 193.4 bits (490), Expect = 1.2e-45
Identity = 93/107 (86.92%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 23  KRERAVEEQSKMIRVFEEGTKKDFPGKFPFYQGRNLGLLDIVVGPNACNYLALREVVGDV 82
           +RERAVEEQSK+IRVFE+G KKDFPGKFPFY G++LGLLDIVVGPNACNYLAL EVVGDV
Sbjct: 123 ERERAVEEQSKLIRVFEDGMKKDFPGKFPFYHGKSLGLLDIVVGPNACNYLALFEVVGDV 182

Query: 83  IDSKRNPDFFSWVDALKGHPLIKETLPPHHKMVHKLKEKIHLKPKDS 130
           IDSKRNPDFF+WVDALK HPLIKE LP HHKMV KLKEKI LKPKDS
Sbjct: 183 IDSKRNPDFFTWVDALKEHPLIKEALPAHHKMVQKLKEKIALKPKDS 229

[Close]

BLAST of CcUC05G106670 vs. NCBI nr
Match: XP_022968092.1 (glutathione S-transferase U10-like [Cucurbita maxima])

HSP 1 Score: 189.1 bits (479), Expect = 2.4e-44
Identity = 91/108 (84.26%), Postives = 97/108 (89.81%), Query Frame = 0


Query: 21  RRKRERAVEEQSKMIRVFEEGTKKDFPGKFPFYQGRNLGLLDIVVGPNACNYLALREVVG 80
           R +RE A +E SK+IRVFEEG KKDFPGKFPFY G+NLGLLDIVVGPNACNYLALREV+G
Sbjct: 122 REEREGACKELSKLIRVFEEGMKKDFPGKFPFYDGKNLGLLDIVVGPNACNYLALREVLG 181

Query: 81  DVIDSKRNPDFFSWVDALKGHPLIKETLPPHHKMVHKLKEKIHLKPKD 129
           DVI SKRNPDFFSWVDALK HPLIKETLPPHHKMV KLKEK+  KPKD
Sbjct: 182 DVIGSKRNPDFFSWVDALKDHPLIKETLPPHHKMVQKLKEKMPQKPKD 229

[Close]

BLAST of CcUC05G106670 vs. NCBI nr
Match: KAG7013145.1 (Glutathione S-transferase U10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 188.0 bits (476), Expect = 5.2e-44
Identity = 90/106 (84.91%), Postives = 95/106 (89.62%), Query Frame = 0


Query: 23  KRERAVEEQSKMIRVFEEGTKKDFPGKFPFYQGRNLGLLDIVVGPNACNYLALREVVGDV 82
           +RE A EE SK+IRVFEEG KKDFPGKFPFY G+NLGLLDIVVGPNACNYLALREV+GDV
Sbjct: 124 EREAACEELSKLIRVFEEGMKKDFPGKFPFYDGKNLGLLDIVVGPNACNYLALREVLGDV 183

Query: 83  IDSKRNPDFFSWVDALKGHPLIKETLPPHHKMVHKLKEKIHLKPKD 129
           I SKRNPDF SWVDALK HP+IKETLPPHHKMV KLKEKI  KPKD
Sbjct: 184 IGSKRNPDFLSWVDALKDHPMIKETLPPHHKMVQKLKEKIPQKPKD 229

[Close]

BLAST of CcUC05G106670 vs. NCBI nr
Match: KAG6574086.1 (Glutathione S-transferase U10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 188.0 bits (476), Expect = 5.2e-44
Identity = 90/106 (84.91%), Postives = 95/106 (89.62%), Query Frame = 0


Query: 23  KRERAVEEQSKMIRVFEEGTKKDFPGKFPFYQGRNLGLLDIVVGPNACNYLALREVVGDV 82
           +RE A EE SK+IRVFEEG KKDFPGKFPFY G+NLGLLDIVVGPNACNYLALREV+GDV
Sbjct: 124 EREAACEELSKLIRVFEEGMKKDFPGKFPFYDGKNLGLLDIVVGPNACNYLALREVLGDV 183

Query: 83  IDSKRNPDFFSWVDALKGHPLIKETLPPHHKMVHKLKEKIHLKPKD 129
           I SKRNPDF SWVDALK HP+IKETLPPHHKMV KLKEKI  KPKD
Sbjct: 184 IGSKRNPDFLSWVDALKDHPMIKETLPPHHKMVQKLKEKIPQKPKD 229

[Close]

BLAST of CcUC05G106670 vs. NCBI nr
Match: XP_022151216.1 (glutathione S-transferase U10-like [Momordica charantia])

HSP 1 Score: 186.8 bits (473), Expect = 1.2e-43
Identity = 91/106 (85.85%), Postives = 94/106 (88.68%), Query Frame = 0


Query: 23  KRERAVEEQSKMIRVFEEGTKKDFPGKFPFYQGRNLGLLDIVVGPNACNYLALREVVGDV 82
           +RERA EE SK+IRVFEEG KKD PGKFPFY G NLGL+DIVVGPNA NYLALREVVG V
Sbjct: 144 ERERACEELSKLIRVFEEGMKKDLPGKFPFYDGENLGLVDIVVGPNASNYLALREVVGPV 203

Query: 83  IDSKRNPDFFSWVDALKGHPLIKETLPPHHKMVHKLKEKIHLKPKD 129
           IDSKRNPDFFSWVDALK HPLIKETLPPHHKMV KLKEKI  KPKD
Sbjct: 204 IDSKRNPDFFSWVDALKAHPLIKETLPPHHKMVQKLKEKIPQKPKD 249

[Close]

BLAST of CcUC05G106670 vs. ExPASy Swiss-Prot
Match: Q9CA57 (Glutathione S-transferase U10 OS=Arabidopsis thaliana OX=3702 GN=GSTU10 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 8.2e-08
Identity = 33/98 (33.67%), Postives = 52/98 (53.06%), Query Frame = 0


Query: 19  QRRRKRERAVEEQSKMIRVFEEGTKKDFPGKFPFYQGRNLGLLDIVVGPNACNYLALREV 78
           Q    + ++VEE  K  +V +EG KK FP K    +  ++GLL+I +      Y A RE 
Sbjct: 119 QEGEAQAKSVEEARKRFKVLDEGLKKHFPNK-NIRRNDDVGLLEITIIATLGGYKAHREA 178

Query: 79  VG-DVIDSKRNPDFFSWVDALKGHPLIKETLPPHHKMV 116
           +G D+I     P  ++W++ L+   +IKE   PH  +V
Sbjct: 179 IGVDIIGPVNTPTLYNWIERLQDLSVIKEVEVPHDTLV 215

[Close]

BLAST of CcUC05G106670 vs. ExPASy TrEMBL
Match: A0A5D3D3N3 (Glutathione S-transferase U10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00470 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 6.0e-46
Identity = 93/107 (86.92%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 23  KRERAVEEQSKMIRVFEEGTKKDFPGKFPFYQGRNLGLLDIVVGPNACNYLALREVVGDV 82
           +RERAVEEQSK+IRVFE+G KKDFPGKFPFY G++LGLLDIVVGPNACNYLAL EVVGDV
Sbjct: 123 ERERAVEEQSKLIRVFEDGMKKDFPGKFPFYHGKSLGLLDIVVGPNACNYLALFEVVGDV 182

Query: 83  IDSKRNPDFFSWVDALKGHPLIKETLPPHHKMVHKLKEKIHLKPKDS 130
           IDSKRNPDFF+WVDALK HPLIKE LP HHKMV KLKEKI LKPKDS
Sbjct: 183 IDSKRNPDFFTWVDALKEHPLIKEALPAHHKMVQKLKEKIALKPKDS 229

[Close]

BLAST of CcUC05G106670 vs. ExPASy TrEMBL
Match: A0A1S3BEV0 (glutathione S-transferase U10-like OS=Cucumis melo OX=3656 GN=LOC103489113 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 6.0e-46
Identity = 93/107 (86.92%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 23  KRERAVEEQSKMIRVFEEGTKKDFPGKFPFYQGRNLGLLDIVVGPNACNYLALREVVGDV 82
           +RERAVEEQSK+IRVFE+G KKDFPGKFPFY G++LGLLDIVVGPNACNYLAL EVVGDV
Sbjct: 123 ERERAVEEQSKLIRVFEDGMKKDFPGKFPFYHGKSLGLLDIVVGPNACNYLALFEVVGDV 182

Query: 83  IDSKRNPDFFSWVDALKGHPLIKETLPPHHKMVHKLKEKIHLKPKDS 130
           IDSKRNPDFF+WVDALK HPLIKE LP HHKMV KLKEKI LKPKDS
Sbjct: 183 IDSKRNPDFFTWVDALKEHPLIKEALPAHHKMVQKLKEKIALKPKDS 229

[Close]

BLAST of CcUC05G106670 vs. ExPASy TrEMBL
Match: A0A6J1HSP4 (glutathione S-transferase U10-like OS=Cucurbita maxima OX=3661 GN=LOC111467428 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.1e-44
Identity = 91/108 (84.26%), Postives = 97/108 (89.81%), Query Frame = 0


Query: 21  RRKRERAVEEQSKMIRVFEEGTKKDFPGKFPFYQGRNLGLLDIVVGPNACNYLALREVVG 80
           R +RE A +E SK+IRVFEEG KKDFPGKFPFY G+NLGLLDIVVGPNACNYLALREV+G
Sbjct: 122 REEREGACKELSKLIRVFEEGMKKDFPGKFPFYDGKNLGLLDIVVGPNACNYLALREVLG 181

Query: 81  DVIDSKRNPDFFSWVDALKGHPLIKETLPPHHKMVHKLKEKIHLKPKD 129
           DVI SKRNPDFFSWVDALK HPLIKETLPPHHKMV KLKEK+  KPKD
Sbjct: 182 DVIGSKRNPDFFSWVDALKDHPLIKETLPPHHKMVQKLKEKMPQKPKD 229

[Close]

BLAST of CcUC05G106670 vs. ExPASy TrEMBL
Match: A0A6J1DDY2 (glutathione S-transferase U10-like OS=Momordica charantia OX=3673 GN=LOC111019191 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 5.7e-44
Identity = 91/106 (85.85%), Postives = 94/106 (88.68%), Query Frame = 0


Query: 23  KRERAVEEQSKMIRVFEEGTKKDFPGKFPFYQGRNLGLLDIVVGPNACNYLALREVVGDV 82
           +RERA EE SK+IRVFEEG KKD PGKFPFY G NLGL+DIVVGPNA NYLALREVVG V
Sbjct: 144 ERERACEELSKLIRVFEEGMKKDLPGKFPFYDGENLGLVDIVVGPNASNYLALREVVGPV 203

Query: 83  IDSKRNPDFFSWVDALKGHPLIKETLPPHHKMVHKLKEKIHLKPKD 129
           IDSKRNPDFFSWVDALK HPLIKETLPPHHKMV KLKEKI  KPKD
Sbjct: 204 IDSKRNPDFFSWVDALKAHPLIKETLPPHHKMVQKLKEKIPQKPKD 249

[Close]

BLAST of CcUC05G106670 vs. ExPASy TrEMBL
Match: A0A0A0KU05 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605060 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.8e-43
Identity = 88/107 (82.24%), Postives = 96/107 (89.72%), Query Frame = 0


Query: 23  KRERAVEEQSKMIRVFEEGTKKDFPGKFPFYQGRNLGLLDIVVGPNACNYLALREVVGDV 82
           +RERAVEE SK+ RVFE+G KKDFPGKFPFY G++LGLLD+VVGPN CNYLALREVVGDV
Sbjct: 35  ERERAVEELSKLTRVFEDGMKKDFPGKFPFYHGKSLGLLDVVVGPNVCNYLALREVVGDV 94

Query: 83  IDSKRNPDFFSWVDALKGHPLIKETLPPHHKMVHKLKEKIHLKPKDS 130
           I SKRNPDF SWVDALK HPLIKET+PP HKMV KLKEKI LKPKD+
Sbjct: 95  IHSKRNPDFCSWVDALKEHPLIKETVPPQHKMVQKLKEKIVLKPKDN 141

[Close]

BLAST of CcUC05G106670 vs. TAIR 10
Match: AT1G74590.1 (glutathione S-transferase TAU 10 )

HSP 1 Score: 58.2 bits (139), Expect = 5.8e-09
Identity = 33/98 (33.67%), Postives = 52/98 (53.06%), Query Frame = 0


Query: 19  QRRRKRERAVEEQSKMIRVFEEGTKKDFPGKFPFYQGRNLGLLDIVVGPNACNYLALREV 78
           Q    + ++VEE  K  +V +EG KK FP K    +  ++GLL+I +      Y A RE 
Sbjct: 119 QEGEAQAKSVEEARKRFKVLDEGLKKHFPNK-NIRRNDDVGLLEITIIATLGGYKAHREA 178

Query: 79  VG-DVIDSKRNPDFFSWVDALKGHPLIKETLPPHHKMV 116
           +G D+I     P  ++W++ L+   +IKE   PH  +V
Sbjct: 179 IGVDIIGPVNTPTLYNWIERLQDLSVIKEVEVPHDTLV 215

The following BLAST results are available for this feature:

BLAST of CcUC05G106670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446345.1	1.2e-45	86.92	PREDICTED: glutathione S-transferase U10-like [Cucumis melo] >KAA0034414.1 gluta...	[more]
XP_022968092.1	2.4e-44	84.26	glutathione S-transferase U10-like [Cucurbita maxima]	[more]
KAG7013145.1	5.2e-44	84.91	Glutathione S-transferase U10, partial [Cucurbita argyrosperma subsp. argyrosper...	[more]
KAG6574086.1	5.2e-44	84.91	Glutathione S-transferase U10, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022151216.1	1.2e-43	85.85	glutathione S-transferase U10-like [Momordica charantia]	[more]

BLAST of CcUC05G106670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CA57	8.2e-08	33.67	Glutathione S-transferase U10 OS=Arabidopsis thaliana OX=3702 GN=GSTU10 PE=2 SV=...	[more]

BLAST of CcUC05G106670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D3N3	6.0e-46	86.92	Glutathione S-transferase U10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BEV0	6.0e-46	86.92	glutathione S-transferase U10-like OS=Cucumis melo OX=3656 GN=LOC103489113 PE=4 ...	[more]
A0A6J1HSP4	1.1e-44	84.26	glutathione S-transferase U10-like OS=Cucurbita maxima OX=3661 GN=LOC111467428 P...	[more]
A0A6J1DDY2	5.7e-44	85.85	glutathione S-transferase U10-like OS=Momordica charantia OX=3673 GN=LOC11101919...	[more]
A0A0A0KU05	2.8e-43	82.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605060 PE=4 SV=1	[more]

BLAST of CcUC05G106670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74590.1	5.8e-09	33.67	glutathione S-transferase TAU 10	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1050.10		coord: 7..125 e-value: 6.1E-18 score: 67.0
None	No IPR available	PANTHER	PTHR11260:SF622	GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN	coord: 20..122
None	No IPR available	PANTHER	PTHR11260	GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING	coord: 20..122
IPR036282	Glutathione S-transferase, C-terminal domain superfamily	SUPERFAMILY	47616	GST C-terminal domain-like	coord: 21..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G106670.1	CcUC05G106670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006749	glutathione metabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004364	glutathione transferase activity