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CcUC05G106600 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCCTTCTCTCGCTTTGTTGTCATCAACATTGCCATTTTCCAATGCCTTTCACTCCTCTGTCTTGCCCAAGATTTCGATTTCTTCTACTTTGTTCAAACTGTAAGCATTCAAACTCTTTAAACTACAACCCAATGTTCTGATTAAAGATTCAATTCTTAATTGCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNCTGCTATCCACAGACTGGAAAACCGAGTGCTGACTTCAAAATTCATGGGCTTTGGCCTAATTACAACGATGCCACTTATCCTTCTAATTGTGACTCATCCAACCCCTTCGATCGAACCCAGGTATTTACTGTTAAATTTATGGTATAGTATTCATTTTATGCCCCAATTGTTTGCGAAGTATATAAGCCAAGTAATACATTGATACGAGACATTTCCGGTGATTTCATGAAACATATCCAAACTGACATTATTCTACTACCGTCCAACTACGTAGGGGTACACTTTATGTTAATTATATGTTTTTGCACCTCACCTAATTTTCTAATTTATCACATTTTTTTTATTATTATTTTTACTTTTTTTATTTTGGTGATTAAAGTGTTAAAAATGGATATATATTGAGATGCATAGAAGTACTGTTTAATTTCACTCGTAGAATTTTGCTTAGAGAGACAATCTTACGATTGAGGCTAAGGTTATATTTGATAATCATTTGGGCCTCCTTTGTTACCATTTCGTTTTTTTTTTTGTTCTTTTTTTTTTTTAAAAAAAAAATTAAGTCTATCTCCTTCGAACTTCTTACAATGATTTCCATCTTTCTTAAATACAATTGTTGAATACTTAGTCAAATTTCAAAAATAAAAACAAAATTTTAAAAGTTACGGTTTTTAAGTTTTTAAAATTTGGTTTTGTTTTTTAAACCATTATTAAATACTAGATAACAAAGGAAGAAATTTGGATGTGGAAATAACATCTATAAACTTAATTTTTAAAGACAAAAACGAAAAATGAAATGGTCACCAAATGGGACCTTATTTTTTGAAATTCGATTTATTTTCTCACAATTTTTTAATCTTCATTTCGAGGTTCAAAGTTCAAATTCTTAACTGAATTTAAAAAAAGAAAAAAGAAAAAGGTAGTTTAGGTAAATGATGGATAAAATTTGTGTGATACAGATATCAGATTTAGTGAGCAGCATGCAGAAGAACTGGCCATCACTAGCGTGTCCAAGCAGCGACAACACAAAATTCTGGGCACATGAGTGGAACAAACATGGAACTTGCGCGGAATCCGTCTTAGACCAACATGGATATTTCGAGACCGCTCTAAACCTTAAAAACCAAGTCAATATCCTCCAAGCTCTTCAAGTCGCAGGTAATCCAAAATCAAGTTCAAAATTAAGCCCATCATAGAAATTAAGGAAAAGTTGAAAATTTGAATCATGGGGTTGTGTGTGTTATTTTTATAGGAATAAACCCAGATGGAAGATACTACAGTTTGAATAAGATTAAGAGTGCCATAGAAGAAGGAATTAAGCTCACCCCTGGAATCACTTGCAATGTGGATGAATCTGGCAACGATCAATTGTATGAAATTTACTTGTGTGTCGATTCATCTGCCTCCAACTTCATTGACTGCCCAATTTTCCCTGATGCAAATTGTGCTTCTTCTGTTGAGTTCCCCTTATTTTAGGGATTTCATTGCTCTAATGTTTATGTTCTTTCTGCTTTTCTTTGTGATTGTCACCACATCTGTTTATGTTGTTAGTAAAATGGTTTCCTGTTCGATTTTTCAAACCATGTTTTCTTTTAGTTTTTATAGAAAAGTCGATATGGGGTAAACTGGCCAGTCAGCTTCTAATGAAGTTGTCACAATAGGCCGAATAATCATTGTGAAAATTGCTATGCCAAATTTTTTAATCGACTCCGTGTCTCCATAATGTGGCCACTGTTATACTTTTCAACGGCTAGTGTGATGCTTTCTTCCAATAATTTCTTCCTTGATTGTCTTCCACATGCTTATGAATAGAACGGTATCTTAAAAAAATATATATATCAAGAAAAGATATTTAGGGCTCCACGGAAAAGCCTTCAGTCATCCCCTTTATCTTGAGATATGCGGATGAAAATCAAGGGGGCTAAACCGCGGAAAAAAGGCTAAAATATACGTTGAAGAAGATTGTTTATGCATTGGAGAGAAAGACTTATGCTAAAATACATAGGCAAAAGATAGATAGACATAGAACACCAGAAAGAAAGAGATGTTTAAAGTAGTTCCTCTTCTTATTGCGCTTTATCGCCCCAGACTGTACTTCAGGCTTTTCCTTCAAGCAGTCTCTTATGGTTAGGGATAGTCTCAATACCCTTTTTAAAAAGCCTTGTTCTCTCTATTTGAGCGAGTTGTCTTTATTGATTAGAGCTCCATGGAACAACTATTTGATTGTGG ATGGATTCCTTCTCTCGCTTTGTTGTCATCAACATTGCCATTTTCCAATGCCTTTCACTCCTCTGTCTTGCCCAAGATTTCGATTTCTTCTACTTTGTTCAAACTACTGGAAAACCGAGTGCTGACTTCAAAATTCATGGGCTTTGGCCTAATTACAACGATGCCACTTATCCTTCTAATTGTGACTCATCCAACCCCTTCGATCGAACCCAGATATCAGATTTAGTGAGCAGCATGCAGAAGAACTGGCCATCACTAGCGTGTCCAAGCAGCGACAACACAAAATTCTGGGCACATGAGTGGAACAAACATGGAACTTGCGCGGAATCCGTCTTAGACCAACATGGATATTTCGAGACCGCTCTAAACCTTAAAAACCAAGTCAATATCCTCCAAGCTCTTCAAGTCGCAGGAATAAACCCAGATGGAAGATACTACAGTTTGAATAAGATTAAGAGTGCCATAGAAGAAGGAATTAAGCTCACCCCTGGAATCACTTGCAATGTGGATGAATCTGGCAACGATCAATTGTATGAAATTTACTTGTGTGTCGATTCATCTGCCTCCAACTTCATTGACTGCCCAATTTTCCCTGATGCAAATTGTGCTTCTTCTGTTGAGTTCCCCTTATTTTAGGGATTTCATTGCTCTAATGTTTATGTTCTTTCTGCTTTTCTTTGTGATTGTCACCACATCTGTTTATGTTGTTAGTAAAATGGTTTCCTGTTCGATTTTTCAAACCATGTTTTCTTTTAGTTTTTATAGAAAAGTCGATATGGGGTAAACTGGCCAGTCAGCTTCTAATGAAGTTGTCACAATAGGCCGAATAATCATTGTGAAAATTGCTATGCCAAATTTTTTAATCGACTCCGTGTCTCCATAATGTGGCCACTGTTATACTTTTCAACGGCTAGTGTGATGCTTTCTTCCAATAATTTCTTCCTTGATTGTCTTCCACATGCTTATGAATAGAACGGTATCTTAAAAAAATATATATATCAAGAAAAGATATTTAGGGCTCCACGGAAAAGCCTTCAGTCATCCCCTTTATCTTGAGATATGCGGATGAAAATCAAGGGGGCTAAACCGCGGAAAAAAGGCTAAAATATACGTTGAAGAAGATTGTTTATGCATTGGAGAGAAAGACTTATGCTAAAATACATAGGCAAAAGATAGATAGACATAGAACACCAGAAAGAAAGAGATGTTTAAAGTAGTTCCTCTTCTTATTGCGCTTTATCGCCCCAGACTGTACTTCAGGCTTTTCCTTCAAGCAGTCTCTTATGGTTAGGGATAGTCTCAATACCCTTTTTAAAAAGCCTTGTTCTCTCTATTTGAGCGAGTTGTCTTTATTGATTAGAGCTCCATGGAACAACTATTTGATTGTGG ATGGATTCCTTCTCTCGCTTTGTTGTCATCAACATTGCCATTTTCCAATGCCTTTCACTCCTCTGTCTTGCCCAAGATTTCGATTTCTTCTACTTTGTTCAAACTACTGGAAAACCGAGTGCTGACTTCAAAATTCATGGGCTTTGGCCTAATTACAACGATGCCACTTATCCTTCTAATTGTGACTCATCCAACCCCTTCGATCGAACCCAGATATCAGATTTAGTGAGCAGCATGCAGAAGAACTGGCCATCACTAGCGTGTCCAAGCAGCGACAACACAAAATTCTGGGCACATGAGTGGAACAAACATGGAACTTGCGCGGAATCCGTCTTAGACCAACATGGATATTTCGAGACCGCTCTAAACCTTAAAAACCAAGTCAATATCCTCCAAGCTCTTCAAGTCGCAGGAATAAACCCAGATGGAAGATACTACAGTTTGAATAAGATTAAGAGTGCCATAGAAGAAGGAATTAAGCTCACCCCTGGAATCACTTGCAATGTGGATGAATCTGGCAACGATCAATTGTATGAAATTTACTTGTGTGTCGATTCATCTGCCTCCAACTTCATTGACTGCCCAATTTTCCCTGATGCAAATTGTGCTTCTTCTGTTGAGTTCCCCTTATTTTAG MDSFSRFVVINIAIFQCLSLLCLAQDFDFFYFVQTTGKPSADFKIHGLWPNYNDATYPSNCDSSNPFDRTQISDLVSSMQKNWPSLACPSSDNTKFWAHEWNKHGTCAESVLDQHGYFETALNLKNQVNILQALQVAGINPDGRYYSLNKIKSAIEEGIKLTPGITCNVDESGNDQLYEIYLCVDSSASNFIDCPIFPDANCASSVEFPLF Homology
BLAST of CcUC05G106600 vs. NCBI nr
Match: XP_038892940.1 (extracellular ribonuclease LE-like [Benincasa hispida]) HSP 1 Score: 392.9 bits (1008), Expect = 1.8e-105 Identity = 186/227 (81.94%), Postives = 197/227 (86.78%), Query Frame = 0
BLAST of CcUC05G106600 vs. NCBI nr
Match: XP_004135454.1 (ribonuclease 1 [Cucumis sativus]) HSP 1 Score: 378.6 bits (971), Expect = 3.4e-101 Identity = 182/224 (81.25%), Postives = 193/224 (86.16%), Query Frame = 0
BLAST of CcUC05G106600 vs. NCBI nr
Match: XP_022945553.1 (extracellular ribonuclease LE [Cucurbita moschata]) HSP 1 Score: 376.3 bits (965), Expect = 1.7e-100 Identity = 177/227 (77.97%), Postives = 193/227 (85.02%), Query Frame = 0
BLAST of CcUC05G106600 vs. NCBI nr
Match: KAG6574082.1 (hypothetical protein SDJN03_27969, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013141.1 hypothetical protein SDJN02_25897, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 375.2 bits (962), Expect = 3.8e-100 Identity = 176/227 (77.53%), Postives = 193/227 (85.02%), Query Frame = 0
BLAST of CcUC05G106600 vs. NCBI nr
Match: XP_023542447.1 (extracellular ribonuclease LE [Cucurbita pepo subsp. pepo]) HSP 1 Score: 374.8 bits (961), Expect = 4.9e-100 Identity = 176/227 (77.53%), Postives = 194/227 (85.46%), Query Frame = 0
BLAST of CcUC05G106600 vs. ExPASy Swiss-Prot
Match: P80022 (Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2) HSP 1 Score: 281.6 bits (719), Expect = 7.5e-75 Identity = 132/226 (58.41%), Postives = 168/226 (74.34%), Query Frame = 0
BLAST of CcUC05G106600 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 1.1e-70 Identity = 119/204 (58.33%), Postives = 146/204 (71.57%), Query Frame = 0
BLAST of CcUC05G106600 vs. ExPASy Swiss-Prot
Match: P80196 (Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2) HSP 1 Score: 263.5 bits (672), Expect = 2.1e-69 Identity = 128/223 (57.40%), Postives = 154/223 (69.06%), Query Frame = 0
BLAST of CcUC05G106600 vs. ExPASy Swiss-Prot
Match: P42815 (Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 2.9e-63 Identity = 113/218 (51.83%), Postives = 141/218 (64.68%), Query Frame = 0
BLAST of CcUC05G106600 vs. ExPASy Swiss-Prot
Match: Q7M438 (Ribonuclease DdI OS=Dictyostelium discoideum OX=44689 GN=ddiA PE=1 SV=3) HSP 1 Score: 124.4 bits (311), Expect = 1.5e-27 Identity = 74/199 (37.19%), Postives = 101/199 (50.75%), Query Frame = 0
BLAST of CcUC05G106600 vs. ExPASy TrEMBL
Match: A0A0A0KQM0 (Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_5G605140 PE=3 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 1.7e-101 Identity = 182/224 (81.25%), Postives = 193/224 (86.16%), Query Frame = 0
BLAST of CcUC05G106600 vs. ExPASy TrEMBL
Match: A0A6J1G181 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111449750 PE=3 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 8.2e-101 Identity = 177/227 (77.97%), Postives = 193/227 (85.02%), Query Frame = 0
BLAST of CcUC05G106600 vs. ExPASy TrEMBL
Match: A0A6J1DBT7 (Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111019062 PE=3 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 5.9e-99 Identity = 175/228 (76.75%), Postives = 191/228 (83.77%), Query Frame = 0
BLAST of CcUC05G106600 vs. ExPASy TrEMBL
Match: A0A6J1HX05 (Ribonuclease T(2) OS=Cucurbita maxima OX=3661 GN=LOC111467429 PE=3 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 7.7e-99 Identity = 175/227 (77.09%), Postives = 191/227 (84.14%), Query Frame = 0
BLAST of CcUC05G106600 vs. ExPASy TrEMBL
Match: A0A5A7STX6 (Ribonuclease T(2) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G004260 PE=3 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 1.5e-97 Identity = 177/223 (79.37%), Postives = 189/223 (84.75%), Query Frame = 0
BLAST of CcUC05G106600 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 ) HSP 1 Score: 267.7 bits (683), Expect = 7.9e-72 Identity = 119/204 (58.33%), Postives = 146/204 (71.57%), Query Frame = 0
BLAST of CcUC05G106600 vs. TAIR 10
Match: AT1G14220.1 (Ribonuclease T2 family protein ) HSP 1 Score: 259.2 bits (661), Expect = 2.8e-69 Identity = 117/220 (53.18%), Postives = 157/220 (71.36%), Query Frame = 0
BLAST of CcUC05G106600 vs. TAIR 10
Match: AT1G26820.1 (ribonuclease 3 ) HSP 1 Score: 243.0 bits (619), Expect = 2.1e-64 Identity = 113/218 (51.83%), Postives = 141/218 (64.68%), Query Frame = 0
BLAST of CcUC05G106600 vs. TAIR 10
Match: AT1G14210.1 (Ribonuclease T2 family protein ) HSP 1 Score: 205.3 bits (521), Expect = 4.8e-53 Identity = 99/223 (44.39%), Postives = 140/223 (62.78%), Query Frame = 0
BLAST of CcUC05G106600 vs. TAIR 10
Match: AT2G39780.1 (ribonuclease 2 ) HSP 1 Score: 112.8 bits (281), Expect = 3.3e-25 Identity = 62/148 (41.89%), Postives = 84/148 (56.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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