CcUC05G105910 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G105910
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	protein CRABS CLAW
Location	CicolChr05: 33301255 .. 33302753 (-)
RNA-Seq Expression	CcUC05G105910
Synteny	CcUC05G105910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTAACTCCGAAGATAAATCTTCCATGGATTTGGTTCAACCTTCTGACCACCTCTGTTATGTCAAATGCAACTTCTGTAACACTCTCCTTGCTGTAATAATAATTTTTCTTTTTCTTTTTCTTTTTCTTTTTATTTTACGAGTACCAATCAATGAATACTCCCCAGGTGGATCCAATTTTTTTTTTATGACTAACTTCTTGGATTTTGAAGGTTGGGATTCCATGCAGACGTTTATTGGATACGGTGACAGTGAAATGTGGTCATTGTAGTAATCTCTCATTTTTAAGCACAAGACCTCCTTTACAAGGCCAATGCATTGATCATCCTCTAAATTTTCAGGTGAAATTAATATTAATTAATAATTAATAATTAGAGACATTTCTTTATTTCTTTATTTATTTATTTAAAAAAGAAAAAAAATATATATTGTAATTAATTATATATTATTACAACCAGTCTCAGGTTGGGTTCTCCAATGATATTCGAAAGGGTGCGTCCACGTCGTCCACTTCCACGTCCTCTTCAATGCCAAATGAGTCCCCTTCTCCAAATTTTGTTGTTAAACGTATGTTTCACTCTTACATCTGTCTCAAGAAAACATTTTTGAAAGTCAAAATTCAAACTTATTCAAAAATAAAAAATCAAATTATATCGTAAATTAAATTCCACCTCATCTTAACCATTTGTTTCTTTCTTTTTCAGCCCCTGAGAAGAAACACAGACTTCCATCTGCTTACAATCGTTTCATGAAGTAAGAACACACACAGTTACAGTTACCGTTATTATTGATTAATCAGAAAATTAGGAATACAAAATTAATTTTCCAATCGGAACTTTTAATTTTTTTTTTTTTTTTTTTAATTATATTAAAGTCTTCACAATATATTGTGTTGTTTTAGAGAGGAGATTCAACGTATCCAAGCTGCCAACCCAGAAATACCTCATCGAGAAGCATTCAGTGCAGCAGCAAAAAACGTAATTAATCAAAACCTTTTTTCTTTTTTAATTTCTATATAATCCAAATCAAAATTTAATTACTTTATTTTTGTTACTGAATTCCTTTCATGTTTTGACAACAGTGGGCAAGGTACATCCCAAATTCAGCTGCTGGGTCGGTTTCTGGAACTCATCACAACAAAGTAAGACAAATCATATATATATATATATATATATATATATATATTTTAATTTAATCTATGGTCACTTCTGTTGTTGCCGATTCATTTTCATTAGAGATCAAATTTTATTAGGATTCGACCCAACAGTATCTTTATAAGGGGGCATGTTCATGATTTTCCTTCAATTTCTACTACTATTGTAAGTTTGAGTGTCCAATTTGATTTTGCCAATGCAATTACAATCCCACTTAATATTAGCATTGATTATAATTCTAGTAATTGAGATTAATGGATTTAGGGTTTTCAATTTTGCAGGAATGAAAGGGTTTAGGGCAGTGGAAGAATTGAACAAATCAAATGGCTGTGTAGGCGGCTAG

mRNA sequence

ATGAGTAACTCCGAAGATAAATCTTCCATGGATTTGGTTCAACCTTCTGACCACCTCTGTTATGTCAAATGCAACTTCTGTAACACTCTCCTTGCTGTTGGGATTCCATGCAGACGTTTATTGGATACGGTGACAGTGAAATGTGGTCATTGTAGTAATCTCTCATTTTTAAGCACAAGACCTCCTTTACAAGGCCAATGCATTGATCATCCTCTAAATTTTCAGGTTGGGTTCTCCAATGATATTCGAAAGGGTGCGTCCACGTCGTCCACTTCCACGTCCTCTTCAATGCCAAATGAGTCCCCTTCTCCAAATTTTGTTGTTAAACCCCCTGAGAAGAAACACAGACTTCCATCTGCTTACAATCGTTTCATGAAAGAGGAGATTCAACGTATCCAAGCTGCCAACCCAGAAATACCTCATCGAGAAGCATTCAGTGCAGCAGCAAAAAACTGGGCAAGGTACATCCCAAATTCAGCTGCTGGGTCGGTTTCTGGAACTCATCACAACAAAATTAATGGATTTAGGGTTTTCAATTTTGCAGGAATGAAAGGGTTTAGGGCAGTGGAAGAATTGAACAAATCAAATGGCTGTGTAGGCGGCTAG

Coding sequence (CDS)

ATGAGTAACTCCGAAGATAAATCTTCCATGGATTTGGTTCAACCTTCTGACCACCTCTGTTATGTCAAATGCAACTTCTGTAACACTCTCCTTGCTGTTGGGATTCCATGCAGACGTTTATTGGATACGGTGACAGTGAAATGTGGTCATTGTAGTAATCTCTCATTTTTAAGCACAAGACCTCCTTTACAAGGCCAATGCATTGATCATCCTCTAAATTTTCAGGTTGGGTTCTCCAATGATATTCGAAAGGGTGCGTCCACGTCGTCCACTTCCACGTCCTCTTCAATGCCAAATGAGTCCCCTTCTCCAAATTTTGTTGTTAAACCCCCTGAGAAGAAACACAGACTTCCATCTGCTTACAATCGTTTCATGAAAGAGGAGATTCAACGTATCCAAGCTGCCAACCCAGAAATACCTCATCGAGAAGCATTCAGTGCAGCAGCAAAAAACTGGGCAAGGTACATCCCAAATTCAGCTGCTGGGTCGGTTTCTGGAACTCATCACAACAAAATTAATGGATTTAGGGTTTTCAATTTTGCAGGAATGAAAGGGTTTAGGGCAGTGGAAGAATTGAACAAATCAAATGGCTGTGTAGGCGGCTAG

Protein sequence

MSNSEDKSSMDLVQPSDHLCYVKCNFCNTLLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLNFQVGFSNDIRKGASTSSTSTSSSMPNESPSPNFVVKPPEKKHRLPSAYNRFMKEEIQRIQAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHHNKINGFRVFNFAGMKGFRAVEELNKSNGCVGG

Homology

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BLAST of CcUC05G105910 vs. NCBI nr
Match: XP_038893344.1 (protein CRABS CLAW isoform X2 [Benincasa hispida])

HSP 1 Score: 330.5 bits (846), Expect = 1.0e-86
Identity = 160/170 (94.12%), Postives = 168/170 (98.82%), Query Frame = 0


Query: 2   SNSEDKSSMDLVQPSDHLCYVKCNFCNTLLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 61
           SNS+DKSSMDLVQPS+HLCYVKCNFCNT+LAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP
Sbjct: 4   SNSDDKSSMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 63

Query: 62  PLQGQCIDHPLNFQVGFSNDIRKGASTSSTSTSSSMPNESPSPNFVVKPPEKKHRLPSAY 121
           PLQGQCIDHPL+FQVGFSNDIRKGASTSSTSTSSS+ NESPSPNFVVKPPEKKHRLPSAY
Sbjct: 64  PLQGQCIDHPLSFQVGFSNDIRKGASTSSTSTSSSLTNESPSPNFVVKPPEKKHRLPSAY 123

Query: 122 NRFMKEEIQRIQAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHHNK 172
           NRFMKEEIQRI+AANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTH+ +
Sbjct: 124 NRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNKE 173

[Close]

BLAST of CcUC05G105910 vs. NCBI nr
Match: XP_038893343.1 (protein CRABS CLAW isoform X1 [Benincasa hispida])

HSP 1 Score: 325.5 bits (833), Expect = 3.3e-85
Identity = 160/172 (93.02%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 2   SNSEDKSSMDLVQPSDHLCYVKCNFCNTLLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 61
           SNS+DKSSMDLVQPS+HLCYVKCNFCNT+LAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP
Sbjct: 4   SNSDDKSSMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 63

Query: 62  PLQGQCIDHPLNF--QVGFSNDIRKGASTSSTSTSSSMPNESPSPNFVVKPPEKKHRLPS 121
           PLQGQCIDHPL+F  QVGFSNDIRKGASTSSTSTSSS+ NESPSPNFVVKPPEKKHRLPS
Sbjct: 64  PLQGQCIDHPLSFQSQVGFSNDIRKGASTSSTSTSSSLTNESPSPNFVVKPPEKKHRLPS 123

Query: 122 AYNRFMKEEIQRIQAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHHNK 172
           AYNRFMKEEIQRI+AANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTH+ +
Sbjct: 124 AYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNKE 175

[Close]

BLAST of CcUC05G105910 vs. NCBI nr
Match: XP_022149102.1 (protein CRABS CLAW [Momordica charantia])

HSP 1 Score: 320.5 bits (820), Expect = 1.1e-83
Identity = 157/173 (90.75%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MSNSEDKSSMDLVQPSDHLCYVKCNFCNTLLAVGIPCRRLLDTVTVKCGHCSNLSFLSTR 60
           MS+ + K+SMDLVQPS+HLCYV+CNFCNT+LAVGIPCRRLLDTVTVKCGHCSNLSFLSTR
Sbjct: 1   MSSEDSKTSMDLVQPSEHLCYVRCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTR 60

Query: 61  PPLQGQCIDHPLNF--QVGFSNDIRKGASTSSTSTSSSMPNESPSPNFVVKPPEKKHRLP 120
           PPLQGQCIDHPL F  QVGFSNDIRKGASTSSTSTSSSM NESPSP+FVVKPPEKKHRLP
Sbjct: 61  PPLQGQCIDHPLGFQTQVGFSNDIRKGASTSSTSTSSSMANESPSPSFVVKPPEKKHRLP 120

Query: 121 SAYNRFMKEEIQRIQAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHHNK 172
           SAYNRFMKEEIQRI+AANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTH+N+
Sbjct: 121 SAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNNE 173

[Close]

BLAST of CcUC05G105910 vs. NCBI nr
Match: XP_022944998.1 (protein CRABS CLAW [Cucurbita moschata])

HSP 1 Score: 317.8 bits (813), Expect = 6.8e-83
Identity = 157/171 (91.81%), Postives = 164/171 (95.91%), Query Frame = 0


Query: 3   NSEDKSSMDLVQPSDHLCYVKCNFCNTLLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPP 62
           +SEDKSSMDLVQPSDHLCYVKCNFCNT+LAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPP
Sbjct: 2   SSEDKSSMDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPP 61

Query: 63  LQGQCIDHPLNF--QVGFSNDIRKGASTSSTSTSSSMPNESPSPNFVVKPPEKKHRLPSA 122
           LQGQCIDHPL+F  QVGFSNDIRKGASTSS+S+SSSM NESPS NFVVKPPEKKHRLPSA
Sbjct: 62  LQGQCIDHPLSFQSQVGFSNDIRKGASTSSSSSSSSMANESPSANFVVKPPEKKHRLPSA 121

Query: 123 YNRFMKEEIQRIQAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHHNK 172
           YNRFMKEEIQRI+AANPEIPHREAFSAAAKNWARYIPNSA GS SGTH N+
Sbjct: 122 YNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHDNE 172

[Close]

BLAST of CcUC05G105910 vs. NCBI nr
Match: KAG7013095.1 (Protein CRABS CLAW, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 317.8 bits (813), Expect = 6.8e-83
Identity = 157/173 (90.75%), Postives = 165/173 (95.38%), Query Frame = 0


Query: 1   MSNSEDKSSMDLVQPSDHLCYVKCNFCNTLLAVGIPCRRLLDTVTVKCGHCSNLSFLSTR 60
           + +SEDKSSMDLVQPSDHLCYVKCNFCNT+LAVGIPCRRLLDTVTVKCGHCSNLSFLSTR
Sbjct: 44  LMSSEDKSSMDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTR 103

Query: 61  PPLQGQCIDHPLNF--QVGFSNDIRKGASTSSTSTSSSMPNESPSPNFVVKPPEKKHRLP 120
           PPLQGQCIDHPL+F  QVGFSNDIRKGASTSS+S+SSSM NESPS NFVVKPPEKKHRLP
Sbjct: 104 PPLQGQCIDHPLSFQSQVGFSNDIRKGASTSSSSSSSSMANESPSANFVVKPPEKKHRLP 163

Query: 121 SAYNRFMKEEIQRIQAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHHNK 172
           SAYNRFMKEEIQRI+AANPEIPHREAFSAAAKNWARYIPNSA GS SGTH N+
Sbjct: 164 SAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHDNE 216

[Close]

BLAST of CcUC05G105910 vs. ExPASy Swiss-Prot
Match: Q8L925 (Protein CRABS CLAW OS=Arabidopsis thaliana OX=3702 GN=CRC PE=1 SV=2)

HSP 1 Score: 211.1 bits (536), Expect = 1.2e-53
Identity = 111/175 (63.43%), Postives = 135/175 (77.14%), Query Frame = 0


Query: 3   NSEDKSSMDLVQPS---DHLCYVKCNFCNTLLAVGIPCRRLLDTVTVKCGHCSNLSFLST 62
           N E+K +M   + S   +HL YV+C+ CNT+LAVGIP +R+LDTVTVKCGHC NLSFL+T
Sbjct: 2   NLEEKPTMTASRASPQAEHLYYVRCSICNTILAVGIPLKRMLDTVTVKCGHCGNLSFLTT 61

Query: 63  RPPLQGQCIDHPLNFQVGFSNDIRKGASTSSTSTSSSMPNESPSPNFVVKPPEKKHRLPS 122
            PPLQG  +   L  Q    +D +KG+S+SS+S++SS    SPSP FVVKPPEKK RLPS
Sbjct: 62  TPPLQGH-VSLTLQMQSFGGSDYKKGSSSSSSSSTSSDQPPSPSPPFVVKPPEKKQRLPS 121

Query: 123 AYNRFMKEEIQRIQAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHHNKING 175
           AYNRFM++EIQRI++ANPEIPHREAFSAAAKNWA+YIPNS     SG  HN I+G
Sbjct: 122 AYNRFMRDEIQRIKSANPEIPHREAFSAAAKNWAKYIPNSPTSITSG-GHNMIHG 174

[Close]

BLAST of CcUC05G105910 vs. ExPASy Swiss-Prot
Match: Q76EJ0 (Protein DROOPING LEAF OS=Oryza sativa subsp. japonica OX=39947 GN=DL PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 4.3e-48
Identity = 100/163 (61.35%), Postives = 120/163 (73.62%), Query Frame = 0


Query: 10  MDLVQPSDHLCYVKCNFCNTLLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQGQC-- 69
           MDLV PS+HLCYV+C +CNT+LAVG+PC+RL+DTVTVKCGHC+NLSFLS RPP+      
Sbjct: 1   MDLVSPSEHLCYVRCTYCNTVLAVGVPCKRLMDTVTVKCGHCNNLSFLSPRPPMVQPLSP 60

Query: 70  IDHPLNFQVGFSNDIRKGASTSSTSTSSSMPNESPSPNFVVKPPEKKHRLPSAYNRFMKE 129
            DHPL    G   D R+       S +S+    SP   FVVKPPEKKHRLPSAYNRFM+E
Sbjct: 61  TDHPLGPFQGPCTDCRRNQPLPLVSPTSN--EGSPRAPFVVKPPEKKHRLPSAYNRFMRE 120

Query: 130 EIQRIQAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHHN 171
           EIQRI+AA P+IPHREAFS AAKNWA+  P   + +VS ++ N
Sbjct: 121 EIQRIKAAKPDIPHREAFSMAAKNWAKCDPR-CSSTVSTSNSN 160

[Close]

BLAST of CcUC05G105910 vs. ExPASy Swiss-Prot
Match: O22152 (Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 5.3e-30
Identity = 78/175 (44.57%), Postives = 98/175 (56.00%), Query Frame = 0


Query: 2   SNSEDKSSMDLVQPSDHLCYVKCNFCNTLLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 61
           S S    S D   PSDHLCYV+CNFC T+LAV +P   L  TVTV+CG C+NL  ++ R 
Sbjct: 8   SPSSAVCSPDHFSPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRS 67

Query: 62  -------PLQGQCIDHPLNFQVGFSNDIRKGASTSSTSTSSSMPNESPSPNF-------- 121
                   LQ Q   H          ++R   S  +    +  P  +  P+F        
Sbjct: 68  YVLPASNQLQLQLGPHSYFNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLHQQHE 127

Query: 122 ------VVKPPEKKHRLPSAYNRFMKEEIQRIQAANPEIPHREAFSAAAKNWARY 156
                 V +PPEK+ R+PSAYNRF+KEEIQRI+A NP+I HREAFSAAAKNWA +
Sbjct: 128 IPKAPPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHF 182

[Close]

BLAST of CcUC05G105910 vs. ExPASy Swiss-Prot
Match: Q8GW46 (Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-29
Identity = 70/145 (48.28%), Postives = 95/145 (65.52%), Query Frame = 0


Query: 13  VQPSDHLCYVKCNFCNTLLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPL 72
           V  ++ LCY+ CNFCN +LAV +PC  L D VTV+CGHC+NL  ++    LQ   +  P 
Sbjct: 5   VMATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQS--LSRP- 64

Query: 73  NFQ-VGFSNDIRKGASTSSTSTSSSMPNESPSPNFVV-KPPEKKHRLPSAYNRFMKEEIQ 132
           NFQ   ++      +S S T   S +   + +   +V +PPEK+ R+PSAYN+F+KEEIQ
Sbjct: 65  NFQATNYAVPEYGSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQ 124

Query: 133 RIQAANPEIPHREAFSAAAKNWARY 156
           RI+A NP+I HREAFS AAKNWA +
Sbjct: 125 RIKANNPDISHREAFSTAAKNWAHF 146

[Close]

BLAST of CcUC05G105910 vs. ExPASy Swiss-Prot
Match: A2X7Q3 (Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 5.9e-29
Identity = 75/185 (40.54%), Postives = 98/185 (52.97%), Query Frame = 0


Query: 15  PSDHLCYVKCNFCNTLLAVGIPCRRLLDTVTVKCGHCSNLSFLSTR-------------- 74
           P++ LCYV CN C+T+LAVG+PC  L  TVTV+CGHC+NL  ++ R              
Sbjct: 21  PTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAPAPAPANQ 80

Query: 75  ----PPLQGQCIDHPLNFQVGFSNDI----------------RKGASTSSTSTSSSMPNE 134
               P L      H L  +V F                    R  +S +S + +  MP  
Sbjct: 81  LHFGPSLLSPTSPHGLLDEVAFQTPSLLMEQAASASLSSITGRSSSSCASNAPAMQMPPA 140

Query: 135 SP----------SPNFVVKPPEKKHRLPSAYNRFMKEEIQRIQAANPEIPHREAFSAAAK 156
            P          +P    +PPEK+ R+PSAYNRF+K+EIQRI+A NP+I HREAFSAAAK
Sbjct: 141 KPVQQEPELPKNAPASANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAK 200

[Close]

BLAST of CcUC05G105910 vs. ExPASy TrEMBL
Match: A0A6J1D6X3 (protein CRABS CLAW OS=Momordica charantia OX=3673 GN=LOC111017593 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 5.1e-84
Identity = 157/173 (90.75%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MSNSEDKSSMDLVQPSDHLCYVKCNFCNTLLAVGIPCRRLLDTVTVKCGHCSNLSFLSTR 60
           MS+ + K+SMDLVQPS+HLCYV+CNFCNT+LAVGIPCRRLLDTVTVKCGHCSNLSFLSTR
Sbjct: 1   MSSEDSKTSMDLVQPSEHLCYVRCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTR 60

Query: 61  PPLQGQCIDHPLNF--QVGFSNDIRKGASTSSTSTSSSMPNESPSPNFVVKPPEKKHRLP 120
           PPLQGQCIDHPL F  QVGFSNDIRKGASTSSTSTSSSM NESPSP+FVVKPPEKKHRLP
Sbjct: 61  PPLQGQCIDHPLGFQTQVGFSNDIRKGASTSSTSTSSSMANESPSPSFVVKPPEKKHRLP 120

Query: 121 SAYNRFMKEEIQRIQAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHHNK 172
           SAYNRFMKEEIQRI+AANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTH+N+
Sbjct: 121 SAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNNE 173

[Close]

BLAST of CcUC05G105910 vs. ExPASy TrEMBL
Match: A0A6J1FZK6 (protein CRABS CLAW OS=Cucurbita moschata OX=3662 GN=LOC111449367 PE=3 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 3.3e-83
Identity = 157/171 (91.81%), Postives = 164/171 (95.91%), Query Frame = 0


Query: 3   NSEDKSSMDLVQPSDHLCYVKCNFCNTLLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPP 62
           +SEDKSSMDLVQPSDHLCYVKCNFCNT+LAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPP
Sbjct: 2   SSEDKSSMDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPP 61

Query: 63  LQGQCIDHPLNF--QVGFSNDIRKGASTSSTSTSSSMPNESPSPNFVVKPPEKKHRLPSA 122
           LQGQCIDHPL+F  QVGFSNDIRKGASTSS+S+SSSM NESPS NFVVKPPEKKHRLPSA
Sbjct: 62  LQGQCIDHPLSFQSQVGFSNDIRKGASTSSSSSSSSMANESPSANFVVKPPEKKHRLPSA 121

Query: 123 YNRFMKEEIQRIQAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHHNK 172
           YNRFMKEEIQRI+AANPEIPHREAFSAAAKNWARYIPNSA GS SGTH N+
Sbjct: 122 YNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHDNE 172

[Close]

BLAST of CcUC05G105910 vs. ExPASy TrEMBL
Match: A0A6J1HVT7 (protein CRABS CLAW OS=Cucurbita maxima OX=3661 GN=LOC111467334 PE=3 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 1.0e-79
Identity = 153/174 (87.93%), Postives = 163/174 (93.68%), Query Frame = 0


Query: 3   NSEDKSSMDLVQPSDHLCYVKCNFCNTLLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPP 62
           +SEDK+SMDLVQPS+HLCYVKCNFCNT+LAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPP
Sbjct: 2   SSEDKASMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPP 61

Query: 63  LQGQCIDHPLNF--QVGFSNDIRKGAST---SSTSTSSSMPNESPSPNFVVKPPEKKHRL 122
           LQGQCIDHPL+F  QVGFSN+IRKGAST   SS+S+SSSM NESPS NFVVKPPEKKHRL
Sbjct: 62  LQGQCIDHPLSFQSQVGFSNNIRKGASTSSSSSSSSSSSMANESPSANFVVKPPEKKHRL 121

Query: 123 PSAYNRFMKEEIQRIQAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHHNK 172
           PSAYNRFMKEEIQRI+AANPEIPHREAFSAAAKNWARYIPNS  GS SGTH N+
Sbjct: 122 PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSVDGSASGTHDNE 175

[Close]

BLAST of CcUC05G105910 vs. ExPASy TrEMBL
Match: A0A6J1ITA5 (protein CRABS CLAW-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478451 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.4e-78
Identity = 153/174 (87.93%), Postives = 163/174 (93.68%), Query Frame = 0


Query: 1   MSNSEDKSSMDLVQPSDHLCYVKCNFCNTLLAVGIPCRRLLDTVTVKCGHCSNLSFLSTR 60
           M +SEDKSSMDLVQP+DHLCYVKCNFCNTLLAVGIPCRRLL+TVTVKCG+CSNLSFLST 
Sbjct: 1   MGSSEDKSSMDLVQPNDHLCYVKCNFCNTLLAVGIPCRRLLETVTVKCGNCSNLSFLSTI 60

Query: 61  PPLQGQCID-HPLNF--QVGFSNDIRKGASTSSTSTSSSMPNESPSPNFVVKPPEKKHRL 120
           PPLQGQCID HPL F  QVGFSND RKGAS SSTS+SSSMPNE PSP+FVVKPPEKKHRL
Sbjct: 61  PPLQGQCIDHHPLTFQPQVGFSNDTRKGASISSTSSSSSMPNEPPSPSFVVKPPEKKHRL 120

Query: 121 PSAYNRFMKEEIQRIQAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHHNK 172
           PSAYN FMKEEIQRI+AANPEIPHREAFSAAAKNWARYIPNSAAGSVSGT +++
Sbjct: 121 PSAYNCFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTPNDE 174

[Close]

BLAST of CcUC05G105910 vs. ExPASy TrEMBL
Match: A0A6J1IU64 (protein CRABS CLAW-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478451 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.4e-78
Identity = 153/170 (90.00%), Postives = 160/170 (94.12%), Query Frame = 0


Query: 1   MSNSEDKSSMDLVQPSDHLCYVKCNFCNTLLAVGIPCRRLLDTVTVKCGHCSNLSFLSTR 60
           M +SEDKSSMDLVQP+DHLCYVKCNFCNTLLAVGIPCRRLL+TVTVKCG+CSNLSFLST 
Sbjct: 1   MGSSEDKSSMDLVQPNDHLCYVKCNFCNTLLAVGIPCRRLLETVTVKCGNCSNLSFLSTI 60

Query: 61  PPLQGQCID-HPLNF--QVGFSNDIRKGASTSSTSTSSSMPNESPSPNFVVKPPEKKHRL 120
           PPLQGQCID HPL F  QVGFSND RKGAS SSTS+SSSMPNE PSP+FVVKPPEKKHRL
Sbjct: 61  PPLQGQCIDHHPLTFQPQVGFSNDTRKGASISSTSSSSSMPNEPPSPSFVVKPPEKKHRL 120

Query: 121 PSAYNRFMKEEIQRIQAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGT 168
           PSAYN FMKEEIQRI+AANPEIPHREAFSAAAKNWARYIPNSAAGSVSGT
Sbjct: 121 PSAYNCFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGT 170

[Close]

BLAST of CcUC05G105910 vs. TAIR 10
Match: AT1G69180.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 211.1 bits (536), Expect = 8.4e-55
Identity = 111/175 (63.43%), Postives = 135/175 (77.14%), Query Frame = 0


Query: 3   NSEDKSSMDLVQPS---DHLCYVKCNFCNTLLAVGIPCRRLLDTVTVKCGHCSNLSFLST 62
           N E+K +M   + S   +HL YV+C+ CNT+LAVGIP +R+LDTVTVKCGHC NLSFL+T
Sbjct: 2   NLEEKPTMTASRASPQAEHLYYVRCSICNTILAVGIPLKRMLDTVTVKCGHCGNLSFLTT 61

Query: 63  RPPLQGQCIDHPLNFQVGFSNDIRKGASTSSTSTSSSMPNESPSPNFVVKPPEKKHRLPS 122
            PPLQG  +   L  Q    +D +KG+S+SS+S++SS    SPSP FVVKPPEKK RLPS
Sbjct: 62  TPPLQGH-VSLTLQMQSFGGSDYKKGSSSSSSSSTSSDQPPSPSPPFVVKPPEKKQRLPS 121

Query: 123 AYNRFMKEEIQRIQAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHHNKING 175
           AYNRFM++EIQRI++ANPEIPHREAFSAAAKNWA+YIPNS     SG  HN I+G
Sbjct: 122 AYNRFMRDEIQRIKSANPEIPHREAFSAAAKNWAKYIPNSPTSITSG-GHNMIHG 174

[Close]

BLAST of CcUC05G105910 vs. TAIR 10
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 132.5 bits (332), Expect = 3.8e-31
Identity = 78/175 (44.57%), Postives = 98/175 (56.00%), Query Frame = 0


Query: 2   SNSEDKSSMDLVQPSDHLCYVKCNFCNTLLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 61
           S S    S D   PSDHLCYV+CNFC T+LAV +P   L  TVTV+CG C+NL  ++ R 
Sbjct: 8   SPSSAVCSPDHFSPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRS 67

Query: 62  -------PLQGQCIDHPLNFQVGFSNDIRKGASTSSTSTSSSMPNESPSPNF-------- 121
                   LQ Q   H          ++R   S  +    +  P  +  P+F        
Sbjct: 68  YVLPASNQLQLQLGPHSYFNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLHQQHE 127

Query: 122 ------VVKPPEKKHRLPSAYNRFMKEEIQRIQAANPEIPHREAFSAAAKNWARY 156
                 V +PPEK+ R+PSAYNRF+KEEIQRI+A NP+I HREAFSAAAKNWA +
Sbjct: 128 IPKAPPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHF 182

[Close]

BLAST of CcUC05G105910 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-30
Identity = 70/145 (48.28%), Postives = 95/145 (65.52%), Query Frame = 0


Query: 13  VQPSDHLCYVKCNFCNTLLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPL 72
           V  ++ LCY+ CNFCN +LAV +PC  L D VTV+CGHC+NL  ++    LQ   +  P 
Sbjct: 5   VMATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQS--LSRP- 64

Query: 73  NFQ-VGFSNDIRKGASTSSTSTSSSMPNESPSPNFVV-KPPEKKHRLPSAYNRFMKEEIQ 132
           NFQ   ++      +S S T   S +   + +   +V +PPEK+ R+PSAYN+F+KEEIQ
Sbjct: 65  NFQATNYAVPEYGSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQ 124

Query: 133 RIQAANPEIPHREAFSAAAKNWARY 156
           RI+A NP+I HREAFS AAKNWA +
Sbjct: 125 RIKANNPDISHREAFSTAAKNWAHF 146

[Close]

BLAST of CcUC05G105910 vs. TAIR 10
Match: AT2G26580.2 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-30
Identity = 70/145 (48.28%), Postives = 95/145 (65.52%), Query Frame = 0


Query: 13  VQPSDHLCYVKCNFCNTLLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPL 72
           V  ++ LCY+ CNFCN +LAV +PC  L D VTV+CGHC+NL  ++    LQ   +  P 
Sbjct: 5   VMATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQS--LSRP- 64

Query: 73  NFQ-VGFSNDIRKGASTSSTSTSSSMPNESPSPNFVV-KPPEKKHRLPSAYNRFMKEEIQ 132
           NFQ   ++      +S S T   S +   + +   +V +PPEK+ R+PSAYN+F+KEEIQ
Sbjct: 65  NFQATNYAVPEYGSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQ 124

Query: 133 RIQAANPEIPHREAFSAAAKNWARY 156
           RI+A NP+I HREAFS AAKNWA +
Sbjct: 125 RIKANNPDISHREAFSTAAKNWAHF 146

[Close]

BLAST of CcUC05G105910 vs. TAIR 10
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-29
Identity = 72/150 (48.00%), Postives = 95/150 (63.33%), Query Frame = 0


Query: 16  SDHLCYVKCNFCNTLLAVGIPCRRLLDTVTVKCGHCSNLSFL--------STRPPLQGQC 75
           S+ +CYV C+FC T+LAV +P   L   VTV+CGHC+NL  L        ++ PP+    
Sbjct: 7   SERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPIHQDL 66

Query: 76  IDHPLNFQVGFSNDIRKGASTSSTSTSSSMPN-ESPSPNF-VVKPPEKKHRLPSAYNRFM 135
             H    Q   S   RK  ++SS ST++   N +  +P    ++PPEK+ R+PSAYNRF+
Sbjct: 67  QPHR---QHTTSLVTRKDCASSSRSTNNLSENIDREAPRMPPIRPPEKRQRVPSAYNRFI 126

Query: 136 KEEIQRIQAANPEIPHREAFSAAAKNWARY 156
           KEEIQRI+A NPEI HREAFS AAKNWA +
Sbjct: 127 KEEIQRIKACNPEISHREAFSTAAKNWAHF 153

The following BLAST results are available for this feature:

BLAST of CcUC05G105910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893344.1	1.0e-86	94.12	protein CRABS CLAW isoform X2 [Benincasa hispida]	[more]
XP_038893343.1	3.3e-85	93.02	protein CRABS CLAW isoform X1 [Benincasa hispida]	[more]
XP_022149102.1	1.1e-83	90.75	protein CRABS CLAW [Momordica charantia]	[more]
XP_022944998.1	6.8e-83	91.81	protein CRABS CLAW [Cucurbita moschata]	[more]
KAG7013095.1	6.8e-83	90.75	Protein CRABS CLAW, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CcUC05G105910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L925	1.2e-53	63.43	Protein CRABS CLAW OS=Arabidopsis thaliana OX=3702 GN=CRC PE=1 SV=2	[more]
Q76EJ0	4.3e-48	61.35	Protein DROOPING LEAF OS=Oryza sativa subsp. japonica OX=39947 GN=DL PE=1 SV=1	[more]
O22152	5.3e-30	44.57	Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1	[more]
Q8GW46	1.6e-29	48.28	Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1	[more]
A2X7Q3	5.9e-29	40.54	Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1	[more]

BLAST of CcUC05G105910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D6X3	5.1e-84	90.75	protein CRABS CLAW OS=Momordica charantia OX=3673 GN=LOC111017593 PE=3 SV=1	[more]
A0A6J1FZK6	3.3e-83	91.81	protein CRABS CLAW OS=Cucurbita moschata OX=3662 GN=LOC111449367 PE=3 SV=1	[more]
A0A6J1HVT7	1.0e-79	87.93	protein CRABS CLAW OS=Cucurbita maxima OX=3661 GN=LOC111467334 PE=3 SV=1	[more]
A0A6J1ITA5	1.4e-78	87.93	protein CRABS CLAW-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478451 P...	[more]
A0A6J1IU64	1.4e-78	90.00	protein CRABS CLAW-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478451 P...	[more]

BLAST of CcUC05G105910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69180.1	8.4e-55	63.43	Plant-specific transcription factor YABBY family protein	[more]
AT2G45190.1	3.8e-31	44.57	Plant-specific transcription factor YABBY family protein	[more]
AT2G26580.1	1.1e-30	48.28	plant-specific transcription factor YABBY family protein	[more]
AT2G26580.2	1.1e-30	48.28	plant-specific transcription factor YABBY family protein	[more]
AT1G08465.1	1.6e-29	48.00	Plant-specific transcription factor YABBY family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 15..155 e-value: 4.8E-51 score: 173.6
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 8..169
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 104..158 e-value: 4.1E-6 score: 29.0
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 101..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..113
None	No IPR available	PANTHER	PTHR31675:SF1	PROTEIN CRABS CLAW	coord: 8..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G105910.1	CcUC05G105910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010582	floral meristem determinacy
biological_process	GO:0010254	nectary development
biological_process	GO:0048479	style development
biological_process	GO:0007275	multicellular organism development
molecular_function	GO:0000976	transcription cis-regulatory region binding