CcUC05G105770 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G105770
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr05: 33192550 .. 33194320 (-)
RNA-Seq Expression	CcUC05G105770
Synteny	CcUC05G105770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGATTAGCTTATTGACCAAGTCTTGCATGTCCTTCCATGAACTTCCATTAGGCCTCACTGCCTCCACCGCTTCTCTTTTCAGCGCTTTCGCTTTCATTTTCTCCGGCGTATCTCCGTTGAAAGACTCGGCGATTATCTTTCCCAACTTGTCCGATTCAGGCACCGAGTTCGCCCCCTCGCAAACGCGCACCGCTACTCCCAACTCCTCTACCAGTAGCCTCGCGTTGATAAACTGGTCCGCTTCCATGGGCCAACCGAGTATCGTTACTCCAGCCACTATGCTCTCAAGCACCGAGTTCCACCCGCAGTGACTCAGAAACCCCCCGACAGCTCGGTGCTTCAGTATCCACACTTGCGGCACCCATCCTCTCGCCAATATTCCACGATCTGATACACGATCCTCAAAACCAATTGGTATTCCGTCCGACCCACCGTTTGTTCGATGAATTGTCTTAACAACCCACACGAACCGAGTACCGCTTTTCTCAAGCCCGGAAGCCAGTGCTTCCATTTGCTGCGGATTCAGTTGCTTTTGACTCCCAAAACAAACGTAAAGAACTGAGTCATCAGGGCATCTGTCCAGCCATGTGAGAATCTCTGAACTCGACTCTCGAATTGGGTTTCGCCCATCCTCTGCAGCGCCGACGATATCTAGGGGTCCGATACCAAATACACGCCCTTCCCCCCTCAATTTCCTCAAGTGTTCTAAATACTCGTGCTCCAAATTCTCAAACGTATTAACAACACAAGCCCAGCTGGATGTATTACATAAGGCGTCTTCCCTCAATAAATTCCAATCGGGGTCCGAATCCTGGTACAACCTTACTAACGATGGCAAATGCTCTTTTCTGAAGGAAGGCGATTTGGGGATTTCACCGAACTGTATGACAGGGGAAGAACGAAAATGATCTGATCTAATGTGAACCCAACAAGAGTTCATTACATGGATGAGGAATGTAGAAATGGAGTAGAAAGCAACTCTGGGAATTTGAAGATGGTCGGCGAGGTGTTGGGTCCAGGCGAGAAAGAAATCGGAAATGATGGCGACGGGAGGGGAAGGATGGGAGTTGAACCACTCAACAATGGGGTCATGGAGCTGGCGGAGGGCAGCCATGATGGGGAAATTTCCATGGTTGCCGATGTGGCTAACGTGTTCGACACCAATGGGGAGTTTGGGGTGAGAAGGTAAGGGGAGAACGAGGGTTTGAACAGAAGGGTGGATTTGAAGAAGGGGCTGAAGGAGATGGAGGTTTTTGGGGGTAACCAAAAGGGTAATTGTGAAGCTGCCATGAGAGGCTAAGTGATGGGTGAGATCGAGGAGTGCGAGCATATGTCCCTGAGCTGGGTATGGAAAAACCAGGAGGTGGCGGGAGGTGACGGGCGGCGGCGGTGAAGATGACATTGTTTGACTTTCAATTTCAATGGGTTTTAATTGATTTGGTGTTTGTAAAAAGGAAGAAGAAAAACAAAGAAACAAAGGCAGAAGAAAGAGGAGAAGTAAAAGGGGAAGACTCAGAAGTGATGGCTGTGTGGACTTGAAGTCTAGACTCCAAAGATGCTAATGGAAAAAGTAAAAGAAAATAAATTGACGTGATATCAAAAATAGGAAAATTATTTTGAGAATGTGGGTTCCCCACGTGGATGATTGTCGAGCGAGTGTCAAGGGGGGGTCAGCTTGGTCGGTTAACGTCGAGCTGGAGATGAATGAGACTGCCGATCCGCCGGTCATGCGGGCAGGCGGTCTCGTCGAGTTTGTTAGTAGAGTGAAC

mRNA sequence

TTGGATTAGCTTATTGACCAAGTCTTGCATGTCCTTCCATGAACTTCCATTAGGCCTCACTGCCTCCACCGCTTCTCTTTTCAGCGCTTTCGCTTTCATTTTCTCCGGCGTATCTCCGTTGAAAGACTCGGCGATTATCTTTCCCAACTTGTCCGATTCAGGCACCGAGTTCGCCCCCTCGCAAACGCGCACCGCTACTCCCAACTCCTCTACCAGTAGCCTCGCGTTGATAAACTGGTCCGCTTCCATGGGCCAACCGAGTATCGTTACTCCAGCCACTATGCTCTCAAGCACCGAGTTCCACCCGCAAAATGGAGTAGAAAGCAACTCTGGGAATTTGAAGATGGTCGGCGAGGTGTTGGGTCCAGGCGAGAAAGAAATCGGAAATGATGGCGACGGGAGGGGAAGGATGGGAGTTGAACCACTCAACAATGGGGTCATGGAGCTGGCGGAGGGCAGCCATGATGGGGAAATTTCCATGGTTGCCGATGTGGCTAACGTGTTCGACACCAATGGGGAGTTTGGGGTGAGAAGGAAAATTATTTTGAGAATGTGGGTTCCCCACGTGGATGATTGTCGAGCGAGTGTCAAGGGGGGGTCAGCTTGGTCGGTTAACGTCGAGCTGGAGATGAATGAGACTGCCGATCCGCCGGTCATGCGGGCAGGCGGTCTCGTCGAGTTTGTTAGTAGAGTGAAC

Coding sequence (CDS)

ATGTCCTTCCATGAACTTCCATTAGGCCTCACTGCCTCCACCGCTTCTCTTTTCAGCGCTTTCGCTTTCATTTTCTCCGGCGTATCTCCGTTGAAAGACTCGGCGATTATCTTTCCCAACTTGTCCGATTCAGGCACCGAGTTCGCCCCCTCGCAAACGCGCACCGCTACTCCCAACTCCTCTACCAGTAGCCTCGCGTTGATAAACTGGTCCGCTTCCATGGGCCAACCGAGTATCGTTACTCCAGCCACTATGCTCTCAAGCACCGAGTTCCACCCGCAAAATGGAGTAGAAAGCAACTCTGGGAATTTGAAGATGGTCGGCGAGGTGTTGGGTCCAGGCGAGAAAGAAATCGGAAATGATGGCGACGGGAGGGGAAGGATGGGAGTTGAACCACTCAACAATGGGGTCATGGAGCTGGCGGAGGGCAGCCATGATGGGGAAATTTCCATGGTTGCCGATGTGGCTAACGTGTTCGACACCAATGGGGAGTTTGGGGTGAGAAGGAAAATTATTTTGAGAATGTGGGTTCCCCACGTGGATGATTGTCGAGCGAGTGTCAAGGGGGGGTCAGCTTGGTCGGTTAACGTCGAGCTGGAGATGAATGAGACTGCCGATCCGCCGGTCATGCGGGCAGGCGGTCTCGTCGAGTTTGTTAGTAGAGTGAAC

Protein sequence

MSFHELPLGLTASTASLFSAFAFIFSGVSPLKDSAIIFPNLSDSGTEFAPSQTRTATPNSSTSSLALINWSASMGQPSIVTPATMLSSTEFHPQNGVESNSGNLKMVGEVLGPGEKEIGNDGDGRGRMGVEPLNNGVMELAEGSHDGEISMVADVANVFDTNGEFGVRRKIILRMWVPHVDDCRASVKGGSAWSVNVELEMNETADPPVMRAGGLVEFVSRVN

Homology

[Close]

BLAST of CcUC05G105770 vs. NCBI nr
Match: XP_022944921.1 (uncharacterized protein LOC111449308 [Cucurbita moschata])

HSP 1 Score: 111.7 bits (278), Expect = 8.3e-21
Identity = 64/85 (75.29%), Postives = 69/85 (81.18%), Query Frame = 0


Query: 5   ELPLGLTASTASLFSAFAFIFSGVSPLKDSAIIFPNLSDSGTEFAPSQTRTATPNSSTSS 64
           ELPL  TASTA+L SA AFIFSG SPLKD AI FPN S+S TEFAPSQTRTATP SST+S
Sbjct: 63  ELPLLRTASTAALLSAPAFIFSGQSPLKDIAITFPNSSESATEFAPSQTRTATPMSSTNS 122

Query: 65  LALINWSASMGQPSIVTPATMLSST 90
           LA  NWSAS+GQP+I TPA  L ST
Sbjct: 123 LAFTNWSASIGQPNISTPAVTLLST 147

[Close]

BLAST of CcUC05G105770 vs. NCBI nr
Match: RXH70060.1 (hypothetical protein DVH24_007316 [Malus domestica])

HSP 1 Score: 102.1 bits (253), Expect = 6.5e-18
Identity = 58/93 (62.37%), Postives = 67/93 (72.04%), Query Frame = 0


Query: 2   SFHELPLGLTASTASLFSAFAFIFSGVSPLKDSAIIFPNLSDSGTEFAPSQTRTATPNSS 61
           SF ELP   TA+ A   S+FA  F+GVSP+  SAI FPN + SGT  +PS T TATP SS
Sbjct: 71  SFEELPPPPTAANAFSLSSFALTFTGVSPVIASAIAFPNSAGSGTASSPSHTFTATPMSS 130

Query: 62  TSSLALINWSASMGQPSIVTPATMLSSTEFHPQ 95
           T+SLA  NWSASMG P+  TPAT+ SSTEFHPQ
Sbjct: 131 TNSLAFTNWSASMGHPNTNTPATIASSTEFHPQ 163

[Close]

BLAST of CcUC05G105770 vs. NCBI nr
Match: RXH70059.1 (hypothetical protein DVH24_007315 [Malus domestica])

HSP 1 Score: 97.1 bits (240), Expect = 2.1e-16
Identity = 57/93 (61.29%), Postives = 65/93 (69.89%), Query Frame = 0


Query: 2   SFHELPLGLTASTASLFSAFAFIFSGVSPLKDSAIIFPNLSDSGTEFAPSQTRTATPNSS 61
           SF ELP   TA+TA   S+FA  FSG SPL DSAI FPN ++SGT  APS T T  P  S
Sbjct: 97  SFEELPPSPTAATALSLSSFALTFSGDSPLIDSAIAFPNSAESGTPSAPSHTFTPMPMYS 156

Query: 62  TSSLALINWSASMGQPSIVTPATMLSSTEFHPQ 95
           T+SLA  NWSA +GQ +I TP T+ SSTEFHPQ
Sbjct: 157 TNSLAFTNWSAFIGQLNIKTPPTIPSSTEFHPQ 189

[Close]

BLAST of CcUC05G105770 vs. NCBI nr
Match: PON76745.1 (hypothetical protein TorRG33x02_241840 [Trema orientale])

HSP 1 Score: 64.7 bits (156), Expect = 1.2e-06
Identity = 35/83 (42.17%), Postives = 54/83 (65.06%), Query Frame = 0


Query: 81  TPATMLSSTEFHPQNGVESNSGNLKMVGEVLGPGEKEIGNDGDGRGRMGVEPLNNGVMEL 140
           TPA  + +  +    G E + G++   G+V  P E+E+G+ G+    +G+EPL+NGV+EL
Sbjct: 29  TPA-FIENRAYKGPRGEEGDPGDINPAGQVECPPEEEVGDKGNRGIWVGLEPLDNGVLEL 88

Query: 141 AEGSHDGEISMVADVANVFDTNG 164
           AEG  DG++S VADV +V D +G
Sbjct: 89  AEGVDDGDVSGVADVPDVLDASG 110

[Close]

BLAST of CcUC05G105770 vs. NCBI nr
Match: PON79792.1 (hypothetical protein PanWU01x14_010240 [Parasponia andersonii])

HSP 1 Score: 64.3 bits (155), Expect = 1.5e-06
Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 0


Query: 81  TPATMLSSTEFHPQNGVESNSGNLKMVGEVLGPGEKEIGNDGDGRGRMGVEPLNNGVMEL 140
           TPA  + +  +    G E + G++   G+V  P E+E+G+ G+    +G+EPL+NGV+EL
Sbjct: 29  TPA-FIENRAYKGPRGEEGDPGDINPAGQVECPPEEEVGDKGNRGIWVGLEPLDNGVLEL 88

Query: 141 AEGSHDGEISMVADVANVFDTNG 164
           AEG  DG++S VADV ++ D +G
Sbjct: 89  AEGVDDGDVSGVADVPDILDASG 110

[Close]

BLAST of CcUC05G105770 vs. ExPASy TrEMBL
Match: A0A6J1FZE4 (uncharacterized protein LOC111449308 OS=Cucurbita moschata OX=3662 GN=LOC111449308 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 4.0e-21
Identity = 64/85 (75.29%), Postives = 69/85 (81.18%), Query Frame = 0


Query: 5   ELPLGLTASTASLFSAFAFIFSGVSPLKDSAIIFPNLSDSGTEFAPSQTRTATPNSSTSS 64
           ELPL  TASTA+L SA AFIFSG SPLKD AI FPN S+S TEFAPSQTRTATP SST+S
Sbjct: 63  ELPLLRTASTAALLSAPAFIFSGQSPLKDIAITFPNSSESATEFAPSQTRTATPMSSTNS 122

Query: 65  LALINWSASMGQPSIVTPATMLSST 90
           LA  NWSAS+GQP+I TPA  L ST
Sbjct: 123 LAFTNWSASIGQPNISTPAVTLLST 147

[Close]

BLAST of CcUC05G105770 vs. ExPASy TrEMBL
Match: A0A498HH54 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_007316 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.2e-18
Identity = 58/93 (62.37%), Postives = 67/93 (72.04%), Query Frame = 0


Query: 2   SFHELPLGLTASTASLFSAFAFIFSGVSPLKDSAIIFPNLSDSGTEFAPSQTRTATPNSS 61
           SF ELP   TA+ A   S+FA  F+GVSP+  SAI FPN + SGT  +PS T TATP SS
Sbjct: 71  SFEELPPPPTAANAFSLSSFALTFTGVSPVIASAIAFPNSAGSGTASSPSHTFTATPMSS 130

Query: 62  TSSLALINWSASMGQPSIVTPATMLSSTEFHPQ 95
           T+SLA  NWSASMG P+  TPAT+ SSTEFHPQ
Sbjct: 131 TNSLAFTNWSASMGHPNTNTPATIASSTEFHPQ 163

[Close]

BLAST of CcUC05G105770 vs. ExPASy TrEMBL
Match: A0A498HGC6 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_007315 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.0e-16
Identity = 57/93 (61.29%), Postives = 65/93 (69.89%), Query Frame = 0


Query: 2   SFHELPLGLTASTASLFSAFAFIFSGVSPLKDSAIIFPNLSDSGTEFAPSQTRTATPNSS 61
           SF ELP   TA+TA   S+FA  FSG SPL DSAI FPN ++SGT  APS T T  P  S
Sbjct: 97  SFEELPPSPTAATALSLSSFALTFSGDSPLIDSAIAFPNSAESGTPSAPSHTFTPMPMYS 156

Query: 62  TSSLALINWSASMGQPSIVTPATMLSSTEFHPQ 95
           T+SLA  NWSA +GQ +I TP T+ SSTEFHPQ
Sbjct: 157 TNSLAFTNWSAFIGQLNIKTPPTIPSSTEFHPQ 189

[Close]

BLAST of CcUC05G105770 vs. ExPASy TrEMBL
Match: A0A7C9CRH0 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 6.6e-08
Identity = 47/94 (50.00%), Postives = 55/94 (58.51%), Query Frame = 0


Query: 2   SFHELPLGLTASTASLFSAFAFIFSGVSP-LKDSAIIFPNLSDSGTEFAPSQTRTATPNS 61
           S  ELP   TAS+ASL +         SP L DSA       + G E APSQT T T + 
Sbjct: 21  SLEELPFSFTASSASLRNFRILFRLSTSPRLTDSAKARARSFELGIELAPSQTLTPTLSC 80

Query: 62  STSSLALINWSASMGQPSIVTPATMLSSTEFHPQ 95
           STS++A  NWSA +GQ S  TPAT  S+TEFHPQ
Sbjct: 81  STSNVAFENWSAPIGQASNSTPATSPSNTEFHPQ 114

[Close]

BLAST of CcUC05G105770 vs. ExPASy TrEMBL
Match: A0A2P5DTY6 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_241840 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 5.6e-07
Identity = 35/83 (42.17%), Postives = 54/83 (65.06%), Query Frame = 0


Query: 81  TPATMLSSTEFHPQNGVESNSGNLKMVGEVLGPGEKEIGNDGDGRGRMGVEPLNNGVMEL 140
           TPA  + +  +    G E + G++   G+V  P E+E+G+ G+    +G+EPL+NGV+EL
Sbjct: 29  TPA-FIENRAYKGPRGEEGDPGDINPAGQVECPPEEEVGDKGNRGIWVGLEPLDNGVLEL 88

Query: 141 AEGSHDGEISMVADVANVFDTNG 164
           AEG  DG++S VADV +V D +G
Sbjct: 89  AEGVDDGDVSGVADVPDVLDASG 110

The following BLAST results are available for this feature:

BLAST of CcUC05G105770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944921.1	8.3e-21	75.29	uncharacterized protein LOC111449308 [Cucurbita moschata]	[more]
RXH70060.1	6.5e-18	62.37	hypothetical protein DVH24_007316 [Malus domestica]	[more]
RXH70059.1	2.1e-16	61.29	hypothetical protein DVH24_007315 [Malus domestica]	[more]
PON76745.1	1.2e-06	42.17	hypothetical protein TorRG33x02_241840 [Trema orientale]	[more]
PON79792.1	1.5e-06	40.96	hypothetical protein PanWU01x14_010240 [Parasponia andersonii]	[more]

BLAST of CcUC05G105770 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC05G105770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZE4	4.0e-21	75.29	uncharacterized protein LOC111449308 OS=Cucurbita moschata OX=3662 GN=LOC1114493...	[more]
A0A498HH54	3.2e-18	62.37	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_007316 PE=4 SV=1	[more]
A0A498HGC6	1.0e-16	61.29	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_007315 PE=4 SV=1	[more]
A0A7C9CRH0	6.6e-08	50.00	Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1	[more]
A0A2P5DTY6	5.6e-07	42.17	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_241840 PE=4 SV...	[more]

BLAST of CcUC05G105770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G105770.1	CcUC05G105770.1	mRNA