CcUC05G105310 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G105310
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Small polypeptide DEVIL 6
Location	CicolChr05: 32803132 .. 32805324 (+)
RNA-Seq Expression	CcUC05G105310
Synteny	CcUC05G105310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTTATGTGTCGTGAAGTGAAGAAATAAGTTAGGGAAGAAAAAGGGTAGGTGGGCATTGTAAAGAAATGCAAACTTGGTGCCCTTGTTTTGTTGGTTCAATGGCCGACCCACTGTGCTGGTGGGTGGTCGAGTCCTACACACACACACATCTTAGGCACATACACCCTAAACTTTAGGGGGGGGGGGGGGGGGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGCCGACCTCCCTCATGCTCTTAAATATTCTTTGTCCTCTAATTTCTTACTATAAAATCCTTTCTTTTTCTTTTTTTCTTTCTCTTTTAGATACAACGTATGTAAGCATTTATTTACATATATATTATAGCATCTCTCCTATAATTTATATCCAATTATATGTTTCTGTCATTTATCCTTTTCTTTCATCATTGTCTATTGTGTTTTTGTTTCTTGCAACTTGTTCATTATCTTTGTGTTTCACTTTCGAAAATCAATATTTTAGACCTTATTTGATTAGTTACATGTGTTATAGTTTTTTCCTCACTCTTTTATAATTCTTAATTATAGCGAGCATTAGAGATTTAAAAAGAGTATTTTTTTTTAATGAAATTTAATTTATGATTAAAAGTGGTTTTTCAAAGATAAATAAAATATATATACACATTCTTTCCAAATATATATAATAGCACATCGAAGTTATGAATATTAGATGTTCTTTATGCAATTTTAACGGTTGCCATACTGTATAGTTATAGCACAACTTGTTTTTAGCCGTGCTACACTATTTCCTAGATTTAAATAAAACTTAGATGATGGTTATTTGGGTTGTTTTCTTTTATATATATATATATATATATATATATAAATAGAAAAATAACAAAATGTATTCTATCATTTATCTATCAGTGATAGACAGTAATGATAAACATTATTGATAGGAATCTATCACTTTCTATCACTAAATGATAGTATTATATTAATGTTTGTTGTTTAAAAACATTTTCAACAATTTTATTATTTAAAATAATTATCTTTATTATTTTTTATTTTTTTAATTCCAGTAACTTAAAAGTAGAGAGATTCTATTGATATTAATGTCAAAATTGTCATTCACCAACTGGTGAGTAATATAGTTATGCCCAAAATTTAAAATGGGAATGGTGAAGAAAATATTAAGATACAAATTTTCAGAATAAATTAGGATGCTTATTATTTATATTATATTCAGTAAAATATATTTTATTTCTTTTTTCTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAGAATGAAGATGAACAGCGCCGGGAGCAAAAGAAGAAGTTCAAGCAGATCAGGGCTTGGAGGAGTTGTGAGGCAACAAAGAGCAAGGCTTTACATTATTAGGCGTTGTGTTGTGATGCTTCTTTGTTGGCATGATTAATGAAGAACAATGCCTTACTTAAAACCCTCTCCCCTTTTCCTCATTTTTGTACATACAATCACCCCTTACCTTACATTCTTTTCTTTTTTTAACCCAAAATTTTGTATTGTTATTATTATTATTATTATTAGGTAGAGATTTTAGTGTTTTCAGCAAAGAAACAAGAAGGCAAAGTGTAAATCTTCGCATCAATGATTATTATTGTTGTTGTTGTTATTATTCTACCAATTCTTTTGAATTTTGATGATCTGGGTTTGGTTTTAATTTTGGTTCTAATATATTGGGAATCGAATTCAAGACAATCAATAGGGTTTTTTTTTTCTCTCTCTTTTTGGTAGTTTGAATGAAAATGAAATGGTGTGTTTGGATTGGATTCTCGAGAAACCTCCCATGTGCTGA

mRNA sequence

ATGGTATACAACATGAACAGCGCCGGGAGCAAAAGAAGAAGTTCAAGCAGATCAGGGCTTGGAGGAGTTGTGAGGCAACAAAGAGCAAGGCTTTACATTATTAGGCGTTGTGTTGTAGAGATTTTAGTGTTTTCAGCAAAGAAACAAGAAGGCAAAGTTTTGAATGAAAATGAAATGGTGTGTTTGGATTGGATTCTCGAGAAACCTCCCATGTGCTGA

Coding sequence (CDS)

ATGGTATACAACATGAACAGCGCCGGGAGCAAAAGAAGAAGTTCAAGCAGATCAGGGCTTGGAGGAGTTGTGAGGCAACAAAGAGCAAGGCTTTACATTATTAGGCGTTGTGTTGTAGAGATTTTAGTGTTTTCAGCAAAGAAACAAGAAGGCAAAGTTTTGAATGAAAATGAAATGGTGTGTTTGGATTGGATTCTCGAGAAACCTCCCATGTGCTGA

Protein sequence

MVYNMNSAGSKRRSSSRSGLGGVVRQQRARLYIIRRCVVEILVFSAKKQEGKVLNENEMVCLDWILEKPPMC

Homology

[Close]

BLAST of CcUC05G105310 vs. NCBI nr
Match: XP_038893017.1 (uncharacterized protein LOC120081908 [Benincasa hispida])

HSP 1 Score: 62.4 bits (150), Expect = 1.9e-06
Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 0


Query: 5  MNSAGSKRRSSSRSGLGGVVRQQRARLYIIRRCVVEIL 43
          MNSAGSKRRSSSR GLGGVVRQQRARLYIIRRCVV +L
Sbjct: 4  MNSAGSKRRSSSR-GLGGVVRQQRARLYIIRRCVVMLL 40

[Close]

BLAST of CcUC05G105310 vs. NCBI nr
Match: XP_008446557.1 (PREDICTED: uncharacterized protein LOC103489253 [Cucumis melo])

HSP 1 Score: 59.3 bits (142), Expect = 1.6e-05
Identity = 33/42 (78.57%), Postives = 35/42 (83.33%), Query Frame = 0


Query: 1  MVYNMNSAGSKRRSSSRSGLGGVVRQQRARLYIIRRCVVEIL 43
          M   MN+ GSKRR SSR GLGGVVRQQRARLYIIRRCVV +L
Sbjct: 5  MTMMMNNGGSKRRGSSR-GLGGVVRQQRARLYIIRRCVVMLL 45

[Close]

BLAST of CcUC05G105310 vs. NCBI nr
Match: XP_011655760.1 (uncharacterized protein LOC101204271 [Cucumis sativus])

HSP 1 Score: 58.2 bits (139), Expect = 3.5e-05
Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 0


Query: 5  MNSAGSKRRSSSRSGLGGVVRQQRARLYIIRRCVVEIL 43
          MN+ GSKRR SSR GLGGVVRQQRARLYIIRRCVV +L
Sbjct: 8  MNNGGSKRRGSSR-GLGGVVRQQRARLYIIRRCVVMLL 44

[Close]

BLAST of CcUC05G105310 vs. NCBI nr
Match: XP_008243168.1 (PREDICTED: uncharacterized protein LOC103341433 [Prunus mume] >XP_020411133.1 uncharacterized protein LOC109946778 [Prunus persica] >XP_021799927.1 uncharacterized protein LOC110744270 [Prunus avium] >XP_034200028.1 uncharacterized protein LOC117615126 [Prunus dulcis] >ONI31309.1 hypothetical protein PRUPE_1G305400 [Prunus persica])

HSP 1 Score: 57.4 bits (137), Expect = 6.0e-05
Identity = 30/42 (71.43%), Postives = 34/42 (80.95%), Query Frame = 0


Query: 1  MVYNMNSAGSKRRSSSRSGLGGVVRQQRARLYIIRRCVVEIL 43
          +V N   AGSKRR SS  GLGGV+R+QRARLYIIRRCVV +L
Sbjct: 3  IVSNSTMAGSKRRLSSSKGLGGVLREQRARLYIIRRCVVMLL 44

[Close]

BLAST of CcUC05G105310 vs. NCBI nr
Match: KGN52048.1 (hypothetical protein Csa_008793 [Cucumis sativus])

HSP 1 Score: 56.2 bits (134), Expect = 1.3e-04
Identity = 30/35 (85.71%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 5  MNSAGSKRRSSSRSGLGGVVRQQRARLYIIRRCVV 40
          MN+ GSKRR SSR GLGGVVRQQRARLYIIRRCV+
Sbjct: 8  MNNGGSKRRGSSR-GLGGVVRQQRARLYIIRRCVI 41

[Close]

BLAST of CcUC05G105310 vs. ExPASy Swiss-Prot
Match: Q6IM95 (Small polypeptide DEVIL 6 OS=Arabidopsis thaliana OX=3702 GN=DVL6 PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.1e-04
Identity = 23/32 (71.88%), Postives = 28/32 (87.50%), Query Frame = 0


Query: 11 KRRSSSRSGLGGVVRQQRARLYIIRRCVVEIL 43
          KRR SS  GLGGV+R+QRA+LYII+RCVV +L
Sbjct: 5  KRRVSSSRGLGGVLREQRAKLYIIKRCVVMLL 36

[Close]

BLAST of CcUC05G105310 vs. ExPASy Swiss-Prot
Match: Q9SAF8 (Small polypeptide DEVIL 4 OS=Arabidopsis thaliana OX=3702 GN=DVL4 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 1.8e-04
Identity = 25/38 (65.79%), Postives = 31/38 (81.58%), Query Frame = 0


Query: 5  MNSAGSKRRSSSRSGLGGVVRQQRARLYIIRRCVVEIL 43
          M   GSKRR SS+ GLG V+++QRA+LYIIRRCVV +L
Sbjct: 1  MKMGGSKRRVSSK-GLGAVLKEQRAKLYIIRRCVVMLL 37

[Close]

BLAST of CcUC05G105310 vs. ExPASy Swiss-Prot
Match: Q6X5T8 (Small polypeptide DEVIL 5 OS=Arabidopsis thaliana OX=3702 GN=DVL5 PE=2 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 9.0e-04
Identity = 23/34 (67.65%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 9  GSKRRSSSRSGLGGVVRQQRARLYIIRRCVVEIL 43
          G+KR+  SR G+GGVVR+Q+A+LYIIRRCVV +L
Sbjct: 10 GTKRKMWSR-GVGGVVREQKAKLYIIRRCVVMLL 42

[Close]

BLAST of CcUC05G105310 vs. ExPASy TrEMBL
Match: A0A1S3BFB7 (uncharacterized protein LOC103489253 OS=Cucumis melo OX=3656 GN=LOC103489253 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.6e-06
Identity = 33/42 (78.57%), Postives = 35/42 (83.33%), Query Frame = 0


Query: 1  MVYNMNSAGSKRRSSSRSGLGGVVRQQRARLYIIRRCVVEIL 43
          M   MN+ GSKRR SSR GLGGVVRQQRARLYIIRRCVV +L
Sbjct: 5  MTMMMNNGGSKRRGSSR-GLGGVVRQQRARLYIIRRCVVMLL 45

[Close]

BLAST of CcUC05G105310 vs. ExPASy TrEMBL
Match: A0A6P5RAV3 (uncharacterized protein LOC110744270 OS=Prunus avium OX=42229 GN=LOC110744270 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.9e-05
Identity = 30/42 (71.43%), Postives = 34/42 (80.95%), Query Frame = 0


Query: 1  MVYNMNSAGSKRRSSSRSGLGGVVRQQRARLYIIRRCVVEIL 43
          +V N   AGSKRR SS  GLGGV+R+QRARLYIIRRCVV +L
Sbjct: 3  IVSNSTMAGSKRRLSSSKGLGGVLREQRARLYIIRRCVVMLL 44

[Close]

BLAST of CcUC05G105310 vs. ExPASy TrEMBL
Match: A0A251R5I7 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G305400 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.9e-05
Identity = 30/42 (71.43%), Postives = 34/42 (80.95%), Query Frame = 0


Query: 1  MVYNMNSAGSKRRSSSRSGLGGVVRQQRARLYIIRRCVVEIL 43
          +V N   AGSKRR SS  GLGGV+R+QRARLYIIRRCVV +L
Sbjct: 3  IVSNSTMAGSKRRLSSSKGLGGVLREQRARLYIIRRCVVMLL 44

[Close]

BLAST of CcUC05G105310 vs. ExPASy TrEMBL
Match: A0A1S3VQN4 (uncharacterized protein LOC106777433 OS=Vigna radiata var. radiata OX=3916 GN=LOC106777433 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 7.1e-04
Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 0


Query: 8  AGSKRRSSSRSGLGGVVRQQRARLYIIRRCVVEIL 43
          AGSKRR SS  GLGG +R+QRARLYIIRRCVV +L
Sbjct: 9  AGSKRRISSNRGLGGALREQRARLYIIRRCVVMLL 43

[Close]

BLAST of CcUC05G105310 vs. ExPASy TrEMBL
Match: A0A6I9T2U5 (uncharacterized protein LOC105161330 OS=Sesamum indicum OX=4182 GN=LOC105161330 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 7.1e-04
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 0


Query: 6  NSAGSKRRSSSRSGLGGVVRQQRARLYIIRRCVVEILVF 45
          NS+ SKRR SSR GLGGV+R+QRARLYIIRRCVV +L +
Sbjct: 7  NSSSSKRRISSR-GLGGVLREQRARLYIIRRCVVMLLCY 44

[Close]

BLAST of CcUC05G105310 vs. TAIR 10
Match: AT3G25717.1 (ROTUNDIFOLIA like 16 )

HSP 1 Score: 47.0 bits (110), Expect = 7.5e-06
Identity = 23/32 (71.88%), Postives = 28/32 (87.50%), Query Frame = 0


Query: 11 KRRSSSRSGLGGVVRQQRARLYIIRRCVVEIL 43
          KRR SS  GLGGV+R+QRA+LYII+RCVV +L
Sbjct: 5  KRRVSSSRGLGGVLREQRAKLYIIKRCVVMLL 36

[Close]

BLAST of CcUC05G105310 vs. TAIR 10
Match: AT1G13245.1 (ROTUNDIFOLIA like 17 )

HSP 1 Score: 46.2 bits (108), Expect = 1.3e-05
Identity = 25/38 (65.79%), Postives = 31/38 (81.58%), Query Frame = 0


Query: 5  MNSAGSKRRSSSRSGLGGVVRQQRARLYIIRRCVVEIL 43
          M   GSKRR SS+ GLG V+++QRA+LYIIRRCVV +L
Sbjct: 1  MKMGGSKRRVSSK-GLGAVLKEQRAKLYIIRRCVVMLL 37

[Close]

BLAST of CcUC05G105310 vs. TAIR 10
Match: AT1G68825.1 (ROTUNDIFOLIA like 15 )

HSP 1 Score: 43.9 bits (102), Expect = 6.4e-05
Identity = 23/34 (67.65%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 9  GSKRRSSSRSGLGGVVRQQRARLYIIRRCVVEIL 43
          G+KR+  SR G+GGVVR+Q+A+LYIIRRCVV +L
Sbjct: 10 GTKRKMWSR-GVGGVVREQKAKLYIIRRCVVMLL 42

[Close]

BLAST of CcUC05G105310 vs. TAIR 10
Match: AT1G68825.2 (ROTUNDIFOLIA like 15 )

HSP 1 Score: 43.9 bits (102), Expect = 6.4e-05
Identity = 23/34 (67.65%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 9  GSKRRSSSRSGLGGVVRQQRARLYIIRRCVVEIL 43
          G+KR+  SR G+GGVVR+Q+A+LYIIRRCVV +L
Sbjct: 10 GTKRKMWSR-GVGGVVREQKAKLYIIRRCVVMLL 42

The following BLAST results are available for this feature:

BLAST of CcUC05G105310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893017.1	1.9e-06	92.11	uncharacterized protein LOC120081908 [Benincasa hispida]	[more]
XP_008446557.1	1.6e-05	78.57	PREDICTED: uncharacterized protein LOC103489253 [Cucumis melo]	[more]
XP_011655760.1	3.5e-05	84.21	uncharacterized protein LOC101204271 [Cucumis sativus]	[more]
XP_008243168.1	6.0e-05	71.43	PREDICTED: uncharacterized protein LOC103341433 [Prunus mume] >XP_020411133.1 un...	[more]
KGN52048.1	1.3e-04	85.71	hypothetical protein Csa_008793 [Cucumis sativus]	[more]

BLAST of CcUC05G105310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6IM95	1.1e-04	71.88	Small polypeptide DEVIL 6 OS=Arabidopsis thaliana OX=3702 GN=DVL6 PE=3 SV=1	[more]
Q9SAF8	1.8e-04	65.79	Small polypeptide DEVIL 4 OS=Arabidopsis thaliana OX=3702 GN=DVL4 PE=2 SV=1	[more]
Q6X5T8	9.0e-04	67.65	Small polypeptide DEVIL 5 OS=Arabidopsis thaliana OX=3702 GN=DVL5 PE=2 SV=1	[more]

BLAST of CcUC05G105310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BFB7	7.6e-06	78.57	uncharacterized protein LOC103489253 OS=Cucumis melo OX=3656 GN=LOC103489253 PE=...	[more]
A0A6P5RAV3	2.9e-05	71.43	uncharacterized protein LOC110744270 OS=Prunus avium OX=42229 GN=LOC110744270 PE...	[more]
A0A251R5I7	2.9e-05	71.43	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G305400 PE=4 SV=1	[more]
A0A1S3VQN4	7.1e-04	77.14	uncharacterized protein LOC106777433 OS=Vigna radiata var. radiata OX=3916 GN=LO...	[more]
A0A6I9T2U5	7.1e-04	74.36	uncharacterized protein LOC105161330 OS=Sesamum indicum OX=4182 GN=LOC105161330 ...	[more]

BLAST of CcUC05G105310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25717.1	7.5e-06	71.88	ROTUNDIFOLIA like 16	[more]
AT1G13245.1	1.3e-05	65.79	ROTUNDIFOLIA like 17	[more]
AT1G68825.1	6.4e-05	67.65	ROTUNDIFOLIA like 15	[more]
AT1G68825.2	6.4e-05	67.65	ROTUNDIFOLIA like 15	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012552	DVL	PFAM	PF08137	DVL	coord: 25..39 e-value: 2.9E-7 score: 30.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G105310.1	CcUC05G105310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008285	negative regulation of cell population proliferation
biological_process	GO:0048367	shoot system development
cellular_component	GO:0005886	plasma membrane