CcUC05G105050 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G105050
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Ubiquitin receptor RAD23
Location	CicolChr05: 32589050 .. 32597322 (+)
RNA-Seq Expression	CcUC05G105050
Synteny	CcUC05G105050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTGCTCTCTTTACTTGCGCTTTCGGTTACCGTCGTTCGAATCCTTTGCTCGCTCTAGGGTATTAGCATAATTCTCTCGATTCCGGCGTCGGACCTGCTGCTGTGGTCTTGCATCTTCGCGAAGGCAGCGATCAATTTCCGAAGATGAAGATTTTTGTCAAGACTCTCAAGGGCTCGCACTTCGAAATCGAAGTTCAGCCTGCAGATACGGTCAGTTTACTTTCTTCATCGGTTTCAGTTTTGTTTTTCGTTTTAAATCATTCGCATTAAGACCGTCACTCGGAATCGAGGCTCTCCGAGTAGGTTTTCGATTCCGGTTTGTGCTTATTTCTTCCAATTGAAGTGTAATTAGGGTTTATGCGATGGTAGTTCGATGTCTTGGTTGTTGAATTGCTGCTTCTTGTGCGATCGAATTGTATTGTGATTTTGAATTTGAATCTTGCTCATCGTCGTTTCTGTACTAATTCTGGAATGTTTCGTTTGCTGTTGTTTTTATTTTCTTGTAAAACATTTAGTTTTTGCTACTGGAGGTTTAGATTGTTATCGTTGTCATTAGCATTGAGTTGCGTAGTTAATGTAACACTTGTGTGCCTACTAATTCAATCATACAACTTACTTCACAACTGTGGTCATCGTTTCCCATGGGGACTTGGACCATGATTGATCTCGCTCCTTGTATTTTGTGAATGATATATTCAATTTGAAACAATAAAGGGAGACGATGAAGGCAGGGTTTAAGGCTGAATGATTGAGTAAATACAGGAGGGGGCCTTTGAATGGATAAGAACTATTTCATTTGTAATTCAAATATTCAGTTAAGGAAATGAAGGATAAGGCATCAATCCCCTCCTAATCATAATAAGACTAAAAAACAACCACGAATGTACTTAAACAAGGAGCATCGTTGAAGAATTTTGAGAACACTAAGATCCTGAAATTTAAATACGCTTCTAGACTACTAACATACGACTCCTGTAAGTTTAAATCGAGTATAAACATAACTTTCTTGCAACTCTAAATAAATATGTTAATACTAGCTAGATGTCTCTTACTGCTTTTTCTTGATCCCATCAACACCAATACTCACCCATTTTCCTCTCGCTTCTAGCAAAATTCATTATGTGATAATTATTTTCTTGATCCTTTCTTGGTTTTTCAGTGACTTGTCAGACTTTGAGGGATGAAATTATGTGGCCAAGCAATAAAATATTATCACTACTGTAGTTTTCCTTTGAACTGATCATCATGTTGTGAAGTGATTCAATCCCATCATAGAATTTTAAGAAACTTAAGCCACTCCCTGCTACACTCACGTGTCTGACTTATCTTCTCTTTGCACTCTTGTGGAATTACTTAATATTTTCTGCAAATACTTGTTTTGCACGTGTTACTAGGTAAAGATGAAGTTTTTTTCTACTTGAAGAAAAGCCCGCCTCTGTAATTAAGCATCTAACATTCTCTTGGGCGAGGAATTTGCTTTGTAATTTGGGTCTTGTCAAACCATTGTTGTTCAACCTTCTGCTTTCTGTTAAGTATAGTGGGGTTCTACATATTAGGTATGTCTGGAAGTCATGAGTCATGACAACCTCGGTGAGTGGGCACAAGTTTCACCCAGGATTTCTCATACTTGTACAGGAAGATAATTCTTAATCCTTTGCCGTTTAAGCCTCTTCGAATTCCTAATTCTATTGGATCAACTATTTAGACTTTTGCCCTTACCTTGTTTTTTAACCTATTCCCTTACCCGAAGTGCCTTCAAATACCAGACAAGTTATAATGATTGAGGAGCAACTTGGTGTTCTAATTGCTTTCATCAGTCTCTAAGGATTCTGTCATGCATTAGAGCCAATAACTTCCCATGCAACATGTCCTCTTGTGAAGCTGCAAATCATGATTGAAATTTGGGCATGATCAGTCCGGTAGTTGGCTTTTAATCCATTTTACTACTGTTGTTATGCAATGTGGCTTTTAGTTGCATTATGATTTCACTATTGTAAGCCATTTCTCTATTTCTCTCCTTGGATGCTCAACACAGAGCTGATTCTATATATTAGGTCTAAATCAGGTGATAGTAATTTTATATGGAAGGGCTGTAACATGCTAGTTTCCCTAGTTTTGAGTCCAACAAGTGTAGTTATGGTCCGAAACTAATTTTGGATGAAAAATAATGATAAAGGAGCTGCTTAAAAAGATGCTGTCTCGAAACAGTAGTTCTTCATATCTATATTTGCCAATTCACATTACTCCAGTTCCACAAATGATTTCTCAGATCACATGCCAGTTTAAATGCAGTAGTTTTTCCATATCCACATTTGCCAATTCATTTTACTCCTCTCCCACAAATGATTTCTCAAAGAGCATATGCCTGTCTCAATACTGTGGCTGCTGTGTCTCTGACTGTCTTGATATCTAGTTGCTGTATTACAGGCAAACACTGGAAGTATTATTCAAATGTAAGTCCAGGAAATGAGTTGAGCCTATATAACGCCTACCACACTTATTTATTTATTTATTTTGAAAATTTAACTTCCAAAATGAGGGCTGTCACTTGTTGCCAGTCCCATTAGGTCAGGGGTGTTGGCCATGCATTTATATTGATTTTTTCGTTTTAGGAATTCTCAAAGGCTTGGAAGTCCCCCTGATAATTGATGTTCATTAATTTACTAGCCACAATGTAATATGTCTTACCTTTAAATGTTTAATTGATAATTAAGCTGTATAAATGTAAACAATCATTTGCTTTATCCATTTTATTTGAGTTTTTTGGTCTTTTGTATAAAAGGAATCACGCACACATATTCATAAATTTAACTGCATCCTCTAATCTCAATAGTAGACTAGTTTACATTATCAATAGTTCTAAACCCATGGACTAAACTTTAGAGTAAATTTCAAATTTTCAAATATTTACATAATTAAATTTGAAGTTTATATTTGATTTAACTGACAGACGTAGTATAATAACCGAGATTGATACAACAAAATTCCCAATGTAAATTCATGGGCAATAAATAAGCCAACCACACCAACAACTAAACTATTCAAGAATATGGTGTTAGTTCTCTAGAATTTCGGTTTGGTTGCTACATCAGGCTTAGTTTGGAATTATTGTAGCTTCTAAAATAATTGTTGTCAAATATGCTCTAGAATTTGAGTAATTAAGTGTTTGTAAATTTCAAACCTAAAAGTGAAAATGTAGAATAAAAGGAGATAAAATAGGAATTTGAATGGTTAATTAGAAGAGTCGTCAGAATTTTTAGGAAGTCAATCCCAAAAGCTAAATTAGCTAGATTTATGAATTGACGTAATTGGAAAATTAATTTTCTATTCCAGAATCCATCCCAACAAAAGCCTCAATCATCCTTTGTTTTATGTAGAGACCTACATTAAAGGAAGATTTTACCGACAGAAAATTTTTATTCCTTGTTTAAAAGCACATGGTTTTACCTTTTTATTATTTTTATTATCTTTAGTGCACCACATCTTTAATGCCTTTTTTATTCTTACGGTGACTTTTGCTGGTTTGTAGGTTGCTGATGTGAAGAAAAACATAGAAACTGTTCAGGGTGCTGATGTTTACCCTGCTGCACAGCAGATGCTTATTCATCAAGGGAAAGTCCTTAAAGATAGCTCAACACTGGAGGAAAATAAAGTTGCAGAAAATAGTTTTATTGTAATAATGTTAACAAAGGTAACAAAGTTAATTTATTTATCATGGAAGGATTGTGTAAATAATACATTCTTGGGAGATTAATATTATTACCAAAGAAAAGCTTGATTACTTGTTTAAACCAAAAGAGATATTTGATGAGTTACATGATTACGTTACCTCATACCATCATTAAAAAGGTATCATGAAAGCCAATACCCTCCAGGTTTCACATTAGTGAAGGTTATATGGTAAAACAAAACAAAGGTTCTATAGTACAGTCAACCATGTTGGAGACTGTGAATCGCACCTGGATATGTGTTTTGGCTTTAACTAGAGCTTTTGATGGTCAAGGTTGTACTATATGCCAAAAGGACTAATGTATCTCTTTGTGTGTGTTGATCGAATGGTTCTTTAATTTAACAGCTTTGTCACAAACTATGCTCCTTGTACTGGAAAAATGTGATACTGAGGATGCAACTTTGGTTGGATGAAACAATTCTATCAGGAAAATTGTTAGGCATCCTTATCTGCAACAGTTGTTGCTGCTTGATGTTGTAGGAGGTGTTCTTCCAACATCTTTTTCAGGACAAGGGCTATACTTTGGTGGTCTGCTTTTTTTACGACTTTATGAGGGATGTGGCTGGAAAGAAATAAGAGATGTTTTCTTTTAATCCAGTGGAGAGGTCTTAGGGAGAAGTTAAGATTTAGGTCATCCCTTTTAGGGTTATTCCCGATAATTTTTGTTGATTCTCTTGGATTGTGGGGGTGATCTTTTGTATAGCTAGTTAGCCCCTTGGTCCTTGTAATCTTTCATTCTTTTCAATTAAAGCCAGTTTTTCATTAAAAAGGAACAAAAGCTACAAGAAAAGAAGAACGATTGTTAGGAAACACTTGACTGTGCTTGTTCTTTTAGTGCTATGATGATGGAAGACTGTTTACTATTGATTTGGGGAAATGTCCCCCAAACGCTGTATATTACCTTGCCTTGAGAGGGAGGCTTACAGATTGGTAGTCTAGAGCTTATGGTGGGAAGTGTTAGCACTGACAATGAAGGGAGTATTTCTCCCTGGATGTTACGAAGTTGACAGTACTGTTCCTGTTGTCTGCACTTGAATTTGGAGTGACAACAAAAATTTTAATATGTTTAGTTATACAAGATCATATTGCAACTTTTACTTATTGGTTAAAGTGTGAACCTTTTTGTTTATATCTTTTCATTATCTTTATGTTTTGTTTTGCTTCAAATGATTTTTTCTTTCTCCTACTTTTTGTATGTAGAATAAAAGTACATCGGGTGGGACATCTTCTACCACACAAGCTGCGCCAGTATCGAAGGTAAGGAATAACAATTCTATGTTTCACTGGCTAGGGGCAATGGTGGTGACTTAATTCACTTTTTTCATCTTTTATTTAAAAATATTCTCTTTTTTCCACAGAGATTGTTGGATGCAAATATCAAATTCTAGTGTGAGCTTTTCAGTATTTAATTTGGGTTGTTTGTATTTCTTTTAGTTAATAGTCATACCTGTTTCTCAAGGAGGTTGGCCATTTTCACACAATTGAATGAATTTATCAATTACTGTATGTTAAGATTAAAAATTTTAAATTATTATTATTGTTATTTAAAAATAACTCATATTTATTTCTTAAAATAGTGGACGAATAAATCTGTCTTCAAGTATTTCTATTATTGACAATGACAATATGATTTTATTAATACTAATGCATAATGTTTTGTTTTGAAGAGATTGATGTACTATAACAGTTATACATGTGATTATCTTCAAATAATCGCCTCAAACCATGCATGATGATGTTTAACGTTCTGATGCCAATCTGTTGGAGTTAAAGCAGTGTTCTTCAATTTTGTTATTTATACCCCCCCATAAAATATTGTTTCCTGTGAAGAAAGGAAGTAAAGAAAAAAAACTTGGAGATATAGTATGATAAGGACCTACTTGCAGGCACCACAGAGCACTGCCCCTGCGCATGCTGCCACTCCAGTGTTAACTTCTGAAGTTCCTCTACCAACTTCAGCACCGTGAGTTCAGATTTTACTGCAATGTCTTTCACTACATCTTCCCAGAATAATCGTTCTGGGAGCATTTATGATTATGTTGATGATCTTCATTTCAGGCCTGCTAATGTTACTGATTCTTCTCCTCCCGCTCCCGCACCGGCTCCTGCTCCTGCTCCCGCTCCCGCTCCCGCTGGAGCCCCAACAACCACTGTTTTGTGAGGAATTCTGCCCTTCTCTTGATGTTTTTTCATTTTCCATATTCCATGCTAGGGTTTCTCACTCTCTCTCTCTATTTTCAGAGTTCAAGTTTTCTAAATTTCCTCTATTACACTGAAACACAGGCCAGAATCGGATGTCTACAGCCAAGCAGCCTCCAACCTGGTTGCTGGTAGTAACTTGGAGGAGACTATCCAACAGATTCTTGACATGGGTGAAGGCGTTTGGGATAGGGACACTGTTGTTCGAGCTCTTCGTGCTGCTTACAATAATCCGGAAAGGGCTGTTGATTACCTTTATTCTGTAAGTCTACCTGCTGGCGTTGTTCTTTTTATATTTTTATTTTTATTTGTATTTTTCCAGTTCCATTGCTATCCTGTCTCATTATATTTTAGTGAATTGGGGTATGGTCCTTGAGCTTGTACTTGTACTTGCTATTGCTTGACGCTCCTGTAGAGTGAACTGTGAATGATCACACTTTTACCTCCAAGTTTAGTTGGTTTAGAATGTATTGTCTGAACAAAATTATCTCATATATAGGGAATACCTGAACAAGTTGAAGCCCCACCTGCTCGAGTTCCGTCAACTGTGCAAGCAACCAACCCTTCTGCTCAACCTGCACAGCCTGCCCAACCTGCATCTGTGCCATCAACTGGCCCAAATGCTAATCCATTAGATCTCTTTCCTCAGGTAGGAAAGATAAATTAAGCAACTTGGTAGCTCGTTTTAATATTACAAGTTTGCCAGGAAAAGGAAAATTCCAGAAATTTTATAGTTTTTTTTTTTTTCCAAACTTGCAAGTTTACGAACATAATCATTTTTACTTCAGGGTGTGCCTAACATAGCTTCTGGAGCTGCTGGTTCCGGCAGTCTTGATTTTCTACGAAATAGTCCTCAGGTCCCTCTCTTTCGTAATTCTCCCAAACCGACACATTCACTTCATTTATTGCCCGCCTCTGAAAATGTGTTTTTTCCTGTCAGTTCCAAGCTTTGCGAGCAATGGTGCGAGCTAACCCTCAGATACTCCAGGTTCCTCATCTCCTGCAATTAACAGCTTTTTCTAAATGTGAGGTCCATTGCTTCGATTTACACAAGGTTCCTTTTCCTTGATTTTGTTTCAGCCTATGCTTCAAGAGTTGGGTAAACAAAATCCTCAGCTGATTAGGCTTATTCAAGATCATCAACCTGACTTCCTCCGCTTGATTAATGAGCCCCTTGAAGGAGAAGGGTACATCTTTTTTCTCCCACTTCTCATTTTGAAACGAAGAGGGAAGTTTATGGATTAGTGATAATATCTAAAAACTTGTTCAGGAATATACTTGGGCAGCTTGCTGAGGCTATGCCACAGGCTATAACTGTAACCCCAGAGGAGCGGGAAGCCATTCAACGGGTTAGTTTACCTTCTCCATTATTATATGAGGGGAACTGCTTAGAGAGAATTCAATATATATATATATATATATATATATATATATATATGTATATATAATTTTCAATTTATATATAAAATTGTGTCGTTTCATTTACTGACTATTAGGGTGGAGTTTGGTAAAATTACAGGTTAAGCCCACTCTCAAGTTGGTGTCTTATCTATGAAAAGTGTGTAGGTGGTCTTTTGAGCTCTTTCAATTATGTGTCTAATATGTTTTTGAACTAATGTCTAATAGGTCATTGAACTTTTTGCTTAAAAAAAAAAAGAGGCCATTGAACGTTTAGTCTTATGTCTAATAGGGCCCTAACATATGTTAAAAATGTTGTTTTTTATGTTATTTGAACTTTCACTTTTATGTCTAATAGTAGGCCTAGATTCTATGTTTTAAAATTTAGGATCTTATTGTATAATTGAAAGTTTAAAATCTGAAGTTTAAGGACTAAGTAGATGAACCTGCAATTGGATTCATCTGGTTTCATAATTGATTTGTTGATATTTATTTGTCTTGGTGTTCCCTACAGCTTGAGGATATGGGTTTCGACAGAGGTCTAGTTGTGGAGGTTTTCTTCGCGTGCAACAAAAACGAAGAAATGGCTGCCAATTACCTTTTAGATCATATTCACGAATTTGAGGGTAATCAGAATTAGACCGTTCTCCTGCCGATTTTAATAAACCCCAAAACGAACAAAAAGAGGAAAAAAAAAAGGTTTATATGAAAAGGACAGCGAATCCAACATCAAAACAAAAAGGAAAGAATCTGTATTTATCCTTCGTGCTTCCCTCGTAAATCTCTGTCTATCTCTTTTCTTCGCCTTTGGCCACATTGTGAATTGTGTTTGCTGTGAACATAGATGTGAAGATGCGTTTTATCTTTTTTATTTTAATTCGCAACTATACTTCGAGCCTTCTCTCATTGTGATTTCTTTCTATATTTTATTCTCTCTCTCTCCCT

mRNA sequence

TCTTGCTCTCTTTACTTGCGCTTTCGGTTACCGTCGTTCGAATCCTTTGCTCGCTCTAGGGTATTAGCATAATTCTCTCGATTCCGGCGTCGGACCTGCTGCTGTGGTCTTGCATCTTCGCGAAGGCAGCGATCAATTTCCGAAGATGAAGATTTTTGTCAAGACTCTCAAGGGCTCGCACTTCGAAATCGAAGTTCAGCCTGCAGATACGGTTGCTGATGTGAAGAAAAACATAGAAACTGTTCAGGGTGCTGATGTTTACCCTGCTGCACAGCAGATGCTTATTCATCAAGGGAAAGTCCTTAAAGATAGCTCAACACTGGAGGAAAATAAAGTTGCAGAAAATAGTTTTATTGTAATAATGTTAACAAAGAATAAAAGTACATCGGGTGGGACATCTTCTACCACACAAGCTGCGCCAGTATCGAAGGTAAGGAATAACAATTCTATGTTTCACTGGCTAGGGGCACCACAGAGCACTGCCCCTGCGCATGCTGCCACTCCAGTGTTAACTTCTGAAGTTCCTCTACCAACTTCAGCACCGCCTGCTAATGTTACTGATTCTTCTCCTCCCGCTCCCGCACCGGCTCCTGCTCCTGCTCCCGCTCCCGCTCCCGCTGGAGCCCCAACAACCACTGTTTTGCCAGAATCGGATGTCTACAGCCAAGCAGCCTCCAACCTGGTTGCTGGTAGTAACTTGGAGGAGACTATCCAACAGATTCTTGACATGGGTGAAGGCGTTTGGGATAGGGACACTGTTGTTCGAGCTCTTCGTGCTGCTTACAATAATCCGGAAAGGGCTGTTGATTACCTTTATTCTGGAATACCTGAACAAGTTGAAGCCCCACCTGCTCGAGTTCCGTCAACTGTGCAAGCAACCAACCCTTCTGCTCAACCTGCACAGCCTGCCCAACCTGCATCTGTGCCATCAACTGGCCCAAATGCTAATCCATTAGATCTCTTTCCTCAGGGTGTGCCTAACATAGCTTCTGGAGCTGCTGGTTCCGGCAGTCTTGATTTTCTACGAAATAGTCCTCAGTTCCAAGCTTTGCGAGCAATGGTGCGAGCTAACCCTCAGATACTCCAGCCTATGCTTCAAGAGTTGGGTAAACAAAATCCTCAGCTGATTAGGCTTATTCAAGATCATCAACCTGACTTCCTCCGCTTGATTAATGAGCCCCTTGAAGGAGAAGGGAATATACTTGGGCAGCTTGCTGAGGCTATGCCACAGGCTATAACTGTAACCCCAGAGGAGCGGGAAGCCATTCAACGGCTTGAGGATATGGGTTTCGACAGAGGTCTAGTTGTGGAGGTTTTCTTCGCGTGCAACAAAAACGAAGAAATGGCTGCCAATTACCTTTTAGATCATATTCACGAATTTGAGGGTAATCAGAATTAGACCGTTCTCCTGCCGATTTTAATAAACCCCAAAACGAACAAAAAGAGGAAAAAAAAAAGGTTTATATGAAAAGGACAGCGAATCCAACATCAAAACAAAAAGGAAAGAATCTGTATTTATCCTTCGTGCTTCCCTCGTAAATCTCTGTCTATCTCTTTTCTTCGCCTTTGGCCACATTGTGAATTGTGTTTGCTGTGAACATAGATGTGAAGATGCGTTTTATCTTTTTTATTTTAATTCGCAACTATACTTCGAGCCTTCTCTCATTGTGATTTCTTTCTATATTTTATTCTCTCTCTCTCCCT

Coding sequence (CDS)

ATGAAGATTTTTGTCAAGACTCTCAAGGGCTCGCACTTCGAAATCGAAGTTCAGCCTGCAGATACGGTTGCTGATGTGAAGAAAAACATAGAAACTGTTCAGGGTGCTGATGTTTACCCTGCTGCACAGCAGATGCTTATTCATCAAGGGAAAGTCCTTAAAGATAGCTCAACACTGGAGGAAAATAAAGTTGCAGAAAATAGTTTTATTGTAATAATGTTAACAAAGAATAAAAGTACATCGGGTGGGACATCTTCTACCACACAAGCTGCGCCAGTATCGAAGGTAAGGAATAACAATTCTATGTTTCACTGGCTAGGGGCACCACAGAGCACTGCCCCTGCGCATGCTGCCACTCCAGTGTTAACTTCTGAAGTTCCTCTACCAACTTCAGCACCGCCTGCTAATGTTACTGATTCTTCTCCTCCCGCTCCCGCACCGGCTCCTGCTCCTGCTCCCGCTCCCGCTCCCGCTGGAGCCCCAACAACCACTGTTTTGCCAGAATCGGATGTCTACAGCCAAGCAGCCTCCAACCTGGTTGCTGGTAGTAACTTGGAGGAGACTATCCAACAGATTCTTGACATGGGTGAAGGCGTTTGGGATAGGGACACTGTTGTTCGAGCTCTTCGTGCTGCTTACAATAATCCGGAAAGGGCTGTTGATTACCTTTATTCTGGAATACCTGAACAAGTTGAAGCCCCACCTGCTCGAGTTCCGTCAACTGTGCAAGCAACCAACCCTTCTGCTCAACCTGCACAGCCTGCCCAACCTGCATCTGTGCCATCAACTGGCCCAAATGCTAATCCATTAGATCTCTTTCCTCAGGGTGTGCCTAACATAGCTTCTGGAGCTGCTGGTTCCGGCAGTCTTGATTTTCTACGAAATAGTCCTCAGTTCCAAGCTTTGCGAGCAATGGTGCGAGCTAACCCTCAGATACTCCAGCCTATGCTTCAAGAGTTGGGTAAACAAAATCCTCAGCTGATTAGGCTTATTCAAGATCATCAACCTGACTTCCTCCGCTTGATTAATGAGCCCCTTGAAGGAGAAGGGAATATACTTGGGCAGCTTGCTGAGGCTATGCCACAGGCTATAACTGTAACCCCAGAGGAGCGGGAAGCCATTCAACGGCTTGAGGATATGGGTTTCGACAGAGGTCTAGTTGTGGAGGTTTTCTTCGCGTGCAACAAAAACGAAGAAATGGCTGCCAATTACCTTTTAGATCATATTCACGAATTTGAGGGTAATCAGAATTAG

Protein sequence

MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLEENKVAENSFIVIMLTKNKSTSGGTSSTTQAAPVSKVRNNNSMFHWLGAPQSTAPAHAATPVLTSEVPLPTSAPPANVTDSSPPAPAPAPAPAPAPAPAGAPTTTVLPESDVYSQAASNLVAGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSGIPEQVEAPPARVPSTVQATNPSAQPAQPAQPASVPSTGPNANPLDLFPQGVPNIASGAAGSGSLDFLRNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAANYLLDHIHEFEGNQN

Homology

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BLAST of CcUC05G105050 vs. NCBI nr
Match: XP_038892724.1 (ubiquitin receptor RAD23d [Benincasa hispida])

HSP 1 Score: 713.4 bits (1840), Expect = 1.2e-201
Identity = 389/417 (93.29%), Postives = 391/417 (93.76%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60
           MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE
Sbjct: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60

Query: 61  ENKVAENSFIVIMLTKNKSTSGGTSSTTQAAPVSKVRNNNSMFHWLGAPQSTAPAHAATP 120
           ENKVAENSFIVIMLTKNKS+SGGTSSTTQAAPV+K            APQSTAPA AATP
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVAK------------APQSTAPAPAATP 120

Query: 121 VLTSEVPLPTSAPPANVTDSSPPAPAPAPAPAPAPAPAGAPTTTVLPESDVYSQAASNLV 180
           V TSEVPLPTSA PA VTDSSPPAPA A A A APAPA AP  TVLPESDVYSQAASNLV
Sbjct: 121 VSTSEVPLPTSALPAAVTDSSPPAPASAAAAAAAPAPAPAPAATVLPESDVYSQAASNLV 180

Query: 181 AGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSGIPEQVEAPPARVPS 240
           AGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSGIPEQVEAPPARVPS
Sbjct: 181 AGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSGIPEQVEAPPARVPS 240

Query: 241 TVQATNPSAQPAQPAQPASVPSTGPNANPLDLFPQGVPNIASGAAGSGSLDFLRNSPQFQ 300
           TVQATNPSAQ AQ AQPASVPSTGPNANPLDLFPQGVPNIASGA GSGSLDFLRNSPQFQ
Sbjct: 241 TVQATNPSAQSAQSAQPASVPSTGPNANPLDLFPQGVPNIASGAVGSGSLDFLRNSPQFQ 300

Query: 301 ALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAM 360
           ALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAM
Sbjct: 301 ALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAM 360

Query: 361 PQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 418
           PQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
Sbjct: 361 PQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 405

[Close]

BLAST of CcUC05G105050 vs. NCBI nr
Match: XP_008446578.1 (PREDICTED: ubiquitin receptor RAD23c-like [Cucumis melo])

HSP 1 Score: 706.4 bits (1822), Expect = 1.4e-199
Identity = 387/434 (89.17%), Postives = 397/434 (91.47%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60
           MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE
Sbjct: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60

Query: 61  ENKVAENSFIVIMLTKNKSTSGGTSSTTQAAPVSKVRNNNSMFHWLGAPQSTAPAHAATP 120
           ENKVAENSFIVIMLTKNKS+SGGTSSTTQAAPVSK            APQSTAPA AATP
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSK------------APQSTAPAPAATP 120

Query: 121 VLTSEVPLPTSAPPANVTDSSPPAPAPAPAPAPA----------------PAPAGAPTTT 180
           V T+EVPLPTSAPPA+VT +SPPAP+PAPAPAPA                PA A AP TT
Sbjct: 121 VSTTEVPLPTSAPPASVTAASPPAPSPAPAPAPASTPAPAPASTPTPTPTPAAAPAPATT 180

Query: 181 VLPESDVYSQAASNLVAGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLY 240
           VLPE+DVYSQAASNLVAGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLY
Sbjct: 181 VLPETDVYSQAASNLVAGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLY 240

Query: 241 SGIPEQVEAPPARVPSTVQATNPSAQPAQPAQPASVPST-GPNANPLDLFPQGVPNIASG 300
           SGIPEQVEAPPARVPSTVQA+NPSAQPAQPAQPASVPS+ GPNANPLDLFPQG+PNI SG
Sbjct: 241 SGIPEQVEAPPARVPSTVQASNPSAQPAQPAQPASVPSSAGPNANPLDLFPQGLPNIGSG 300

Query: 301 AAGSGSLDFLRNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLIN 360
           A GSGSLDFLRNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLIN
Sbjct: 301 AVGSGSLDFLRNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLIN 360

Query: 361 EPLEGEGNILGQLAEAMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAAN 418
           EPLEGEGNILGQLAEAMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAAN
Sbjct: 361 EPLEGEGNILGQLAEAMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAAN 420

[Close]

BLAST of CcUC05G105050 vs. NCBI nr
Match: XP_011655771.1 (ubiquitin receptor RAD23d [Cucumis sativus] >KGN52072.1 hypothetical protein Csa_008289 [Cucumis sativus])

HSP 1 Score: 703.7 bits (1815), Expect = 9.2e-199
Identity = 382/432 (88.43%), Postives = 393/432 (90.97%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60
           MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE
Sbjct: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60

Query: 61  ENKVAENSFIVIMLTKNKSTSGGTSSTTQAAPVSKVRNNNSMFHWLGAPQSTAPAHAATP 120
           ENKVAENSFIVIMLTKNKS+SGGTSSTT AAPV+K            APQSTAPA AATP
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTHAAPVAK------------APQSTAPAPAATP 120

Query: 121 VLTSEVPLPTSAPPANVTDSSPPAPAPAPAPAPAPAPAGAPT--------------TTVL 180
           V T+EVPLPTSAPPA+VT SSPPAP+P P P PAPAPA  PT              TTVL
Sbjct: 121 VSTTEVPLPTSAPPASVTASSPPAPSPTPVPVPAPAPAPTPTPTPTPAAAPAPSLATTVL 180

Query: 181 PESDVYSQAASNLVAGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSG 240
           P++DVYSQAASNLVAGSNLEET+QQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSG
Sbjct: 181 PDADVYSQAASNLVAGSNLEETVQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSG 240

Query: 241 IPEQVEAPPARVPSTVQATNPSAQPAQPAQPASVP-STGPNANPLDLFPQGVPNIASGAA 300
           IPEQVEAPPARVPSTVQA+NPSAQPAQPAQPAS P STGPNANPLDLFPQG+PN+ SGA 
Sbjct: 241 IPEQVEAPPARVPSTVQASNPSAQPAQPAQPASAPSSTGPNANPLDLFPQGLPNLGSGAV 300

Query: 301 GSGSLDFLRNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEP 360
           GSGSLDFLRNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEP
Sbjct: 301 GSGSLDFLRNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEP 360

Query: 361 LEGEGNILGQLAEAMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAANYL 418
           LEGEGNILGQLAEAMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAANYL
Sbjct: 361 LEGEGNILGQLAEAMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAANYL 420

[Close]

BLAST of CcUC05G105050 vs. NCBI nr
Match: KAG6601319.1 (Ubiquitin receptor RAD23c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 682.9 bits (1761), Expect = 1.7e-192
Identity = 371/418 (88.76%), Postives = 385/418 (92.11%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60
           MKIFVKTLKGSHFEIEV+P D VADVKKNIETVQGADVYPAAQQMLIHQGKVLKD +TL+
Sbjct: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSTSGGTSSTTQAAPVSKVRNNNSMFHWLGAPQSTAPAHAATP 120
           ENKV+ENSFIVIMLTKNKS+SG TSSTTQAAPVSK            APQ+TAPA AATP
Sbjct: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSK------------APQNTAPAPAATP 120

Query: 121 VLTSEVPLPTSAPPANVTDSSPPAPAPAPAPAPAPAPAGAPTTTVLPESDVYSQAASNLV 180
           V TSEVPLPTSAPPA VTDS+PPAP PA APAPAP+PA  P TTVL ESDVYSQAASNLV
Sbjct: 121 VSTSEVPLPTSAPPATVTDSTPPAP-PALAPAPAPSPAAVPATTVLAESDVYSQAASNLV 180

Query: 181 AGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSGIPEQVEAPPAR-VP 240
           AGSNLE+TIQQIL MG G+WDRDTVVRALRAAYNNPERAVDYLYSGIPEQ+E PPA  VP
Sbjct: 181 AGSNLEDTIQQILLMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVP 240

Query: 241 STVQATNPSAQPAQPAQPASVPSTGPNANPLDLFPQGVPNIASGAAGSGSLDFLRNSPQF 300
           STVQATNPSAQPAQPAQPASV STGPNANPLDLFPQG+PNI+SGA GSGSLDFLRNSPQF
Sbjct: 241 STVQATNPSAQPAQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQF 300

Query: 301 QALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEA 360
           QALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEA
Sbjct: 301 QALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEA 360

Query: 361 MPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 418
           MPQAITVTPEEREAIQRLED+GFDR LVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
Sbjct: 361 MPQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 405

[Close]

BLAST of CcUC05G105050 vs. NCBI nr
Match: KAG7032103.1 (Ubiquitin receptor RAD23c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 680.2 bits (1754), Expect = 1.1e-191
Identity = 373/424 (87.97%), Postives = 387/424 (91.27%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60
           MKIFVKTLKGSHFEIEV+P D VADVKKNIETVQGADVYPAAQQMLIHQGKVLKD +TL+
Sbjct: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSTSGGTSSTTQAAPVSKVRNNNSMFHWLGAPQSTAPAHAATP 120
           ENKV+ENSFIVIMLTKNKS+SG TSSTTQAAPVSK    N     L APQ+TAPA AATP
Sbjct: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKYDMTN-----LQAPQNTAPAPAATP 120

Query: 121 VLTSEVPLPTSAPPANVTDSSPPAPAPAPAPAPAPAPAGAPTTTVLPESDVYSQAASNLV 180
           V TSEVPLPTSAPPA VTDS+PPAP PA APAPAP+PA  P TTVL ESDVYSQAASNLV
Sbjct: 121 VSTSEVPLPTSAPPATVTDSTPPAP-PALAPAPAPSPAAVPATTVLAESDVYSQAASNLV 180

Query: 181 AGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSGIPEQVEAPPAR-VP 240
           AGSNLE+TIQQIL MG G+WDRDTVVRALRAAYNNPERAVDYLYSGIPEQ+E PPA  VP
Sbjct: 181 AGSNLEDTIQQILLMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVP 240

Query: 241 STVQATNPS------AQPAQPAQPASVPSTGPNANPLDLFPQGVPNIASGAAGSGSLDFL 300
           STVQATNPS      AQPAQPAQPASV STGPNANPLDLFPQG+PNI+SGA GSGSLDFL
Sbjct: 241 STVQATNPSAQPAQPAQPAQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFL 300

Query: 301 RNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNIL 360
           RNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNIL
Sbjct: 301 RNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNIL 360

Query: 361 GQLAEAMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAANYLLDHIHEFE 418
           GQLAEAMPQAITVTPEEREAIQRLED+GFDR LVVEVFFACNKNEEMAANYLLDHIHEFE
Sbjct: 361 GQLAEAMPQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFE 418

[Close]

BLAST of CcUC05G105050 vs. ExPASy Swiss-Prot
Match: Q84L31 (Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2)

HSP 1 Score: 481.9 bits (1239), Expect = 7.4e-135
Identity = 279/437 (63.84%), Postives = 323/437 (73.91%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60
           MKIFVKTLKG+HFEIEV+P D+V DVKKNIE+VQGADVYPAA+QMLIHQGKVLKD +T+E
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 61  ENKVAENSFIVIMLTKNKSTSGGTSSTTQAAPVSKVRNNNSMFHWLGAPQSTAPAHAATP 120
           ENKVAENSFIVIM+ K+K  S   SS +     +K                + P   + P
Sbjct: 61  ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAK----------------SIPPSTSQP 120

Query: 121 VLTSEVPLPTSAPPANV-TDSSPPAPAPAPAPA----------PAPAPAGAPTTTVLPES 180
            ++ + P   SAP A   T   PPAP P PAP           P P PA   ++T  P+S
Sbjct: 121 SISPQTPASVSAPVAPAPTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAPDS 180

Query: 181 -------DVYSQAASNLVAGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDY 240
                  DVY QAASNL AGSNLE TIQQILDMG G WDR+TVV ALRAA+NNPERAV+Y
Sbjct: 181 APVGSQGDVYGQAASNLAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEY 240

Query: 241 LYSGIPEQVEAPP-ARVPSTVQATNPSAQPAQPAQPASVPSTGPNANPLDLFPQGVPNIA 300
           LY+GIPEQ E PP AR P++  A  P+  PAQ  QPA+ P++GPNANPLDLFPQG+PN+ 
Sbjct: 241 LYTGIPEQAEVPPVARPPAS--AGQPANPPAQTQQPAAAPASGPNANPLDLFPQGLPNV- 300

Query: 301 SGAAGSGSLDFLRNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRL 360
            G  G+G+LDFLRNS QFQALRAMV+ANPQ+LQPMLQELGKQNP L+RLIQDHQ DFLRL
Sbjct: 301 GGNPGAGTLDFLRNSQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRL 360

Query: 361 INEPLEG---EGNILGQLAEAM--PQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNK 414
           INEP+EG    GN+LGQ+A  M  PQAI VT EEREAI+RLE MGF+R LV+EVFFACNK
Sbjct: 361 INEPVEGGGESGNLLGQMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNK 418

[Close]

BLAST of CcUC05G105050 vs. ExPASy Swiss-Prot
Match: Q84L30 (Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2)

HSP 1 Score: 473.4 bits (1217), Expect = 2.6e-132
Identity = 274/415 (66.02%), Postives = 313/415 (75.42%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60
           MKIFVKTL GS+FEIEV+PAD V+DVK  IETV+GA+ YPAA+QMLIHQGKVLKD +TLE
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 60

Query: 61  ENKVAENSFIVIMLTKNKSTSGGTSSTTQAAPVSKVRNNNSMFHWLGAPQSTAPAHAATP 120
           EN V ENSFIVIML+K K++  G S  T +AP               AP +T P   ATP
Sbjct: 61  ENNVVENSFIVIMLSKTKASPSGAS--TASAP---------------APSATQPQTVATP 120

Query: 121 VLTSEVPLPTSAPPANVTDSSPPAPAPAPAPAPAPAPAGAPTTTVLPESDVYSQAASNLV 180
                     SAP A+V           P P    A A AP T    ++DVY QAASNLV
Sbjct: 121 --------QVSAPTASV-----------PVPTSGTATAAAPATAASVQTDVYGQAASNLV 180

Query: 181 AGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSGIPEQVEAPP-ARVP 240
           AG+ LE T+QQILDMG G WDRDTVVRALRAA+NNPERAV+YLYSGIP Q E PP A+ P
Sbjct: 181 AGTTLESTVQQILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPAQAEIPPVAQAP 240

Query: 241 ST-VQATNPSAQPAQPAQPASVPSTGPNANPLDLFPQGVPNIASGAAGSGSLDFLRNSPQ 300
           +T  QA NP AQP Q A PA+  + GPNANPL+LFPQG+P  A   AG+G+LDFLRNS Q
Sbjct: 241 ATGEQAANPLAQPQQAAAPAAA-TGGPNANPLNLFPQGMP-AADAGAGAGNLDFLRNSQQ 300

Query: 301 FQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAE 360
           FQALRAMV+ANPQILQPMLQELGKQNPQL+RLIQ+HQ DFLRLINEP+EGE N++ QL  
Sbjct: 301 FQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVEGEENVMEQLEA 360

Query: 361 AMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAANYLLDHIHEFE 414
           AMPQA+TVTPEEREAI+RLE MGFDR +V+EVFFACNKNEE+AANYLLDH+HEFE
Sbjct: 361 AMPQAVTVTPEEREAIERLEGMGFDRAMVLEVFFACNKNEELAANYLLDHMHEFE 376

[Close]

BLAST of CcUC05G105050 vs. ExPASy Swiss-Prot
Match: Q40742 (Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RAD23 PE=1 SV=2)

HSP 1 Score: 406.4 bits (1043), Expect = 4.0e-112
Identity = 239/417 (57.31%), Postives = 293/417 (70.26%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60
           MKI VKTLKGS F+IEV  A  VADVK+ IET QG  +YPA QQMLIHQGKVLKD +TL+
Sbjct: 1   MKISVKTLKGSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSTSGGTSSTTQAAPVSKVRNNNSMFHWLGAPQSTAPAHAATP 120
           ENKV ENSF+VIML + K +S    +T                       S AP++ A P
Sbjct: 61  ENKVLENSFLVIMLRQGKGSSSSAPAT-----------------------SKAPSNQAPP 120

Query: 121 VLTSEVPLPTSAPPANVTDSSPPAPAPAPAPAPAPAPAGAPTTTVLPESDVYSQAASNLV 180
             T      + AP A  T       AP P    +PAPA A    V  E+D Y QA SNLV
Sbjct: 121 TQTVPAAPASQAPVAPATTVPVTVSAPTPTATASPAPAVA----VSSEADNYGQATSNLV 180

Query: 181 AGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSGIPEQVEAPPARVPS 240
           AGSNLE TIQ IL+MG G+WDRD V+ AL AA+NNPERAV+YLYSG+PEQ++ P    P 
Sbjct: 181 AGSNLEATIQSILEMGGGIWDRDIVLHALSAAFNNPERAVEYLYSGVPEQMDIPVP--PP 240

Query: 241 TVQATNP--SAQPAQPAQPASVPSTGPNANPLDLFPQGVPNIASGAAGSGSLDFLRNSPQ 300
           ++Q  NP  ++Q  QPA P S+ S+GPNA+PLDLFPQ +PN ++ AAG G+LD LRN+ Q
Sbjct: 241 SIQPANPTQASQATQPAAP-SILSSGPNASPLDLFPQALPNASTDAAGLGNLDALRNNAQ 300

Query: 301 FQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEG--EGNILGQL 360
           F+ L ++V+ANPQILQP+LQELGKQNPQ+++LIQ++Q +FL LINEP EG  E N+L Q 
Sbjct: 301 FRTLLSLVQANPQILQPLLQELGKQNPQILQLIQENQAEFLHLINEPAEGDDEENLLDQF 360

Query: 361 AEAMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAANYLLDHIHEFE 414
            EAMPQ I VTPEE EAI RLE MGFDR LV++VFFACNK+E++AANYLLDH++EF+
Sbjct: 361 PEAMPQTIAVTPEENEAILRLEAMGFDRALVLDVFFACNKDEQLAANYLLDHMNEFD 387

[Close]

BLAST of CcUC05G105050 vs. ExPASy Swiss-Prot
Match: Q84L33 (Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3)

HSP 1 Score: 360.1 bits (923), Expect = 3.3e-98
Identity = 220/417 (52.76%), Postives = 272/417 (65.23%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60
           MK+ VKTLKGSHFEI V P+DT+  VKKNIE  QG D YP  QQ+LIH GKVLKD ++L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVAENSFIVIMLTKNKSTSGGTSSTTQAAPVSKVRNNNSMFHWLGAPQSTAPAHAATP 120
           ENKV E  F+V+ML+K+KS      ++ Q + VS+                  P  A T 
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSVSQ------------------PVSATT- 120

Query: 121 VLTSEVPLPTSAPPANVTDSSPPAPAPAPAPAPAPAPAGAPTTTVLPESDVYSQAASNLV 180
                    ++ P A  T  S P PA   +P PA     A T       D Y QAAS LV
Sbjct: 121 --------SSTKPAAPSTTQSSPVPA---SPIPAQEQPAAQT-------DTYGQAASTLV 180

Query: 181 AGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSGIPEQVEAPPARVPS 240
           +GS+LE+ +QQI++MG G WD++TV RALRAAYNNPERAVDYLYSGIP+  E        
Sbjct: 181 SGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAE-------- 240

Query: 241 TVQATNPSAQPA-QPAQPASVPSTGPNANPLDLFPQGVPNIASGAAGSGSLDFLRNSPQF 300
            V    P AQ A   A P +  S GPN++PLDLFPQ     A+G+   G+L+FLRN+ QF
Sbjct: 241 -VAVPVPEAQIAGSGAAPVAPASGGPNSSPLDLFPQETV-AAAGSGDLGTLEFLRNNDQF 300

Query: 301 QALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLE---GEGNILGQL 360
           Q LR MV +NPQILQPMLQELGKQNPQL+RLIQ++Q +FL+L+NEP E   GEG++  Q 
Sbjct: 301 QQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQP 360

Query: 361 AEAMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAANYLLDHIHEFE 414
            + MP AI VTP E+EAIQRLE MGFDR LV+E F AC++NEE+AANYLL++  +FE
Sbjct: 361 EQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFE 370

[Close]

BLAST of CcUC05G105050 vs. ExPASy Swiss-Prot
Match: Q84L32 (Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=2 SV=2)

HSP 1 Score: 352.1 bits (902), Expect = 8.9e-96
Identity = 212/416 (50.96%), Postives = 268/416 (64.42%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60
           MK+ VKTLKGSHFEI V P DT+  VKKNIE  Q  D YP  QQ+LIH GKVLKD +TL 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 61  ENKVAENSFIVIMLTKNKSTSGGTSSTTQAAPVSKVRNNNSMFHWLGAPQSTAPAHAATP 120
           ENKV E  F+V+ML+K+K+ S    S+TQ                   P ST        
Sbjct: 61  ENKVTEEGFLVVMLSKSKTASSAGPSSTQ-------------------PTSTT------- 120

Query: 121 VLTSEVPLPTSAPPANVTDSSPPAPAPAPAPAPAPAPAGAPTTTVLPESDVYSQAASNLV 180
             TS +   T A P+     + PA    P      A           +SD Y QAAS LV
Sbjct: 121 --TSTISSTTLAAPSTTQSIAVPASNSTPVQEQPTA-----------QSDTYGQAASTLV 180

Query: 181 AGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSGIPEQVEAPPARVPS 240
           +GS++E+ +QQI++MG G WD++TV RALRAAYNNPERAVDYLYSGIPE V         
Sbjct: 181 SGSSIEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPETV--------- 240

Query: 241 TVQATNPSAQPAQPAQPASVPSTGPNANPLDLFPQGVPNIASGAAGSGSLDFLRNSPQFQ 300
           T+ ATN S   +     A  PS GPN++PLDLFPQ   + A+G    G+L+FLR + QFQ
Sbjct: 241 TIPATNLSGVGSGRELTAPPPSGGPNSSPLDLFPQEAVSDAAG-GDLGTLEFLRGNDQFQ 300

Query: 301 ALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLE---GEGNILGQLA 360
            LR+MV +NPQILQPMLQELGKQNPQL+RLIQ++Q +FL+L+NEP E   G+ +I  Q  
Sbjct: 301 QLRSMVNSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLLNEPYEGSDGDVDIFDQPD 360

Query: 361 EAMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAANYLLDHIHEFE 414
           + MP ++ VTPEE+E+I+RLE MGFDR +V+E F +C++NEE+AANYLL+H  +FE
Sbjct: 361 QEMPHSVNVTPEEQESIERLEAMGFDRAIVIEAFLSCDRNEELAANYLLEHSADFE 367

[Close]

BLAST of CcUC05G105050 vs. ExPASy TrEMBL
Match: A0A1S3BEW2 (Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103489268 PE=3 SV=1)

HSP 1 Score: 706.4 bits (1822), Expect = 6.9e-200
Identity = 387/434 (89.17%), Postives = 397/434 (91.47%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60
           MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE
Sbjct: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60

Query: 61  ENKVAENSFIVIMLTKNKSTSGGTSSTTQAAPVSKVRNNNSMFHWLGAPQSTAPAHAATP 120
           ENKVAENSFIVIMLTKNKS+SGGTSSTTQAAPVSK            APQSTAPA AATP
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSK------------APQSTAPAPAATP 120

Query: 121 VLTSEVPLPTSAPPANVTDSSPPAPAPAPAPAPA----------------PAPAGAPTTT 180
           V T+EVPLPTSAPPA+VT +SPPAP+PAPAPAPA                PA A AP TT
Sbjct: 121 VSTTEVPLPTSAPPASVTAASPPAPSPAPAPAPASTPAPAPASTPTPTPTPAAAPAPATT 180

Query: 181 VLPESDVYSQAASNLVAGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLY 240
           VLPE+DVYSQAASNLVAGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLY
Sbjct: 181 VLPETDVYSQAASNLVAGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLY 240

Query: 241 SGIPEQVEAPPARVPSTVQATNPSAQPAQPAQPASVPST-GPNANPLDLFPQGVPNIASG 300
           SGIPEQVEAPPARVPSTVQA+NPSAQPAQPAQPASVPS+ GPNANPLDLFPQG+PNI SG
Sbjct: 241 SGIPEQVEAPPARVPSTVQASNPSAQPAQPAQPASVPSSAGPNANPLDLFPQGLPNIGSG 300

Query: 301 AAGSGSLDFLRNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLIN 360
           A GSGSLDFLRNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLIN
Sbjct: 301 AVGSGSLDFLRNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLIN 360

Query: 361 EPLEGEGNILGQLAEAMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAAN 418
           EPLEGEGNILGQLAEAMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAAN
Sbjct: 361 EPLEGEGNILGQLAEAMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAAN 420

[Close]

BLAST of CcUC05G105050 vs. ExPASy TrEMBL
Match: A0A0A0KUH2 (Ubiquitin receptor RAD23 OS=Cucumis sativus OX=3659 GN=Csa_5G608600 PE=3 SV=1)

HSP 1 Score: 703.7 bits (1815), Expect = 4.4e-199
Identity = 382/432 (88.43%), Postives = 393/432 (90.97%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60
           MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE
Sbjct: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60

Query: 61  ENKVAENSFIVIMLTKNKSTSGGTSSTTQAAPVSKVRNNNSMFHWLGAPQSTAPAHAATP 120
           ENKVAENSFIVIMLTKNKS+SGGTSSTT AAPV+K            APQSTAPA AATP
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTHAAPVAK------------APQSTAPAPAATP 120

Query: 121 VLTSEVPLPTSAPPANVTDSSPPAPAPAPAPAPAPAPAGAPT--------------TTVL 180
           V T+EVPLPTSAPPA+VT SSPPAP+P P P PAPAPA  PT              TTVL
Sbjct: 121 VSTTEVPLPTSAPPASVTASSPPAPSPTPVPVPAPAPAPTPTPTPTPAAAPAPSLATTVL 180

Query: 181 PESDVYSQAASNLVAGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSG 240
           P++DVYSQAASNLVAGSNLEET+QQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSG
Sbjct: 181 PDADVYSQAASNLVAGSNLEETVQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSG 240

Query: 241 IPEQVEAPPARVPSTVQATNPSAQPAQPAQPASVP-STGPNANPLDLFPQGVPNIASGAA 300
           IPEQVEAPPARVPSTVQA+NPSAQPAQPAQPAS P STGPNANPLDLFPQG+PN+ SGA 
Sbjct: 241 IPEQVEAPPARVPSTVQASNPSAQPAQPAQPASAPSSTGPNANPLDLFPQGLPNLGSGAV 300

Query: 301 GSGSLDFLRNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEP 360
           GSGSLDFLRNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEP
Sbjct: 301 GSGSLDFLRNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEP 360

Query: 361 LEGEGNILGQLAEAMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAANYL 418
           LEGEGNILGQLAEAMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAANYL
Sbjct: 361 LEGEGNILGQLAEAMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAANYL 420

[Close]

BLAST of CcUC05G105050 vs. ExPASy TrEMBL
Match: A0A6J1G0H9 (Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111449587 PE=3 SV=1)

HSP 1 Score: 679.5 bits (1752), Expect = 9.0e-192
Identity = 371/424 (87.50%), Postives = 383/424 (90.33%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60
           MKIFVKTLKGSHFEIEVQP D VADVKKNIETVQGADVYPAAQQMLIHQGKVLKD +TL+
Sbjct: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSTSGGTSSTTQAAPVSKVRNNNSMFHWLGAPQSTAPAHAATP 120
           ENKVAENSFIVIMLTKNKS+SGGTSSTTQAAPVSK            APQ+TAPA AATP
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSK------------APQNTAPAPAATP 120

Query: 121 VLTSEVPLPTSAPPANVTDSSPP------APAPAPAPAPAPAPAGAPTTTVLPESDVYSQ 180
           V TSEVPLPTSAPPA +T SS P      APAPAPA APAPAPA AP TTVLPESDVYSQ
Sbjct: 121 VSTSEVPLPTSAPPATITTSSLPAPAPAQAPAPAPAQAPAPAPAQAPATTVLPESDVYSQ 180

Query: 181 AASNLVAGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSGIPEQVEAP 240
           AASNLVAGSNLEETIQQIL MG G+WDRDTVV+ALRAAYNNPERAVDYLYSGIPEQVE P
Sbjct: 181 AASNLVAGSNLEETIQQILLMGGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVP 240

Query: 241 P-ARVPSTVQATNPSAQPAQPAQPASVPSTGPNANPLDLFPQGVPNIASGAAGSGSLDFL 300
           P A VPSTV  TNPSAQPAQPAQPAS  +TGPNANPLDLFPQGVPN+ASGA  SGSLDFL
Sbjct: 241 PAAHVPSTVPVTNPSAQPAQPAQPASATTTGPNANPLDLFPQGVPNLASGAVSSGSLDFL 300

Query: 301 RNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNIL 360
           RNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGN+L
Sbjct: 301 RNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVL 360

Query: 361 GQLAEAMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAANYLLDHIHEFE 418
           GQLA+AMPQAITVTPEEREAIQRLED+GFDR LVVEVFFACNKNEEMAANYLLDHIHEFE
Sbjct: 361 GQLADAMPQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFE 412

[Close]

BLAST of CcUC05G105050 vs. ExPASy TrEMBL
Match: A0A6J1GXU6 (Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111458469 PE=3 SV=1)

HSP 1 Score: 676.4 bits (1744), Expect = 7.6e-191
Identity = 371/424 (87.50%), Postives = 385/424 (90.80%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60
           MKIFVKTLKGSHFEIEV+P D VADVKKNIETVQGADVYPAAQQMLIHQGKVLKD +TL+
Sbjct: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSTSGGTSSTTQAAPVSKVRNNNSMFHWLGAPQSTAPAHAATP 120
           ENKV+ENSFIVIMLTKNKS+SG TSSTTQAAPVSK            APQ+TAPA AATP
Sbjct: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSK------------APQNTAPAPAATP 120

Query: 121 VLTSEVPLPTSAPPANVTDSSPPAPAPAPAPAPAPAPAGAPTTTVLPESDVYSQAASNLV 180
           V TSEVPLPTSAPPA VTDS+PPAP PA APAPAP+PA  P TTVL ESDVYSQAASNLV
Sbjct: 121 VSTSEVPLPTSAPPATVTDSTPPAP-PALAPAPAPSPAAVPATTVLAESDVYSQAASNLV 180

Query: 181 AGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSGIPEQVEAPPAR-VP 240
           AGSNLE+TIQQIL MG G+WDRDTVVRALRAAYNNPERAVDYLYSGIPEQ+E PPA  VP
Sbjct: 181 AGSNLEDTIQQILLMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVP 240

Query: 241 STVQATNPS------AQPAQPAQPASVPSTGPNANPLDLFPQGVPNIASGAAGSGSLDFL 300
           STVQATNPS      AQPAQPAQPASV STGPNANPLDLFPQG+PNI+SGA GSGSLDFL
Sbjct: 241 STVQATNPSAQPAQPAQPAQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFL 300

Query: 301 RNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNIL 360
           RNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNIL
Sbjct: 301 RNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNIL 360

Query: 361 GQLAEAMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAANYLLDHIHEFE 418
           GQLAEAMPQAITVTPEEREAIQRLED+GFDR LVVEVFFACNKNEEMAANYLLDHIHEFE
Sbjct: 361 GQLAEAMPQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFE 411

[Close]

BLAST of CcUC05G105050 vs. ExPASy TrEMBL
Match: A0A6J1IZ65 (Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111479749 PE=3 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 9.9e-191
Identity = 372/424 (87.74%), Postives = 383/424 (90.33%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60
           MKIFVKTLKGSHFEIEVQP D VADVKKNIETVQGADVYPAAQQMLIHQGKVLKD +TL+
Sbjct: 1   MKIFVKTLKGSHFEIEVQPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSTSGGTSSTTQAAPVSKVRNNNSMFHWLGAPQSTAPAHAATP 120
           ENKV+ENSFIVIMLTKNKS+SGGTSSTTQAAPVSK            APQ+TAPA AATP
Sbjct: 61  ENKVSENSFIVIMLTKNKSSSGGTSSTTQAAPVSK------------APQNTAPAPAATP 120

Query: 121 VLTSEVPLPTSAPPANVTDSSPPAPAPAPAPAPAPAPAGAPTTTVLPESDVYSQAASNLV 180
           V TSEVPLPTSAPPA VTDSSPPAP   PA APAPAPA  P T VL ESDVYSQAASNLV
Sbjct: 121 VSTSEVPLPTSAPPATVTDSSPPAP---PALAPAPAPATVPATPVLAESDVYSQAASNLV 180

Query: 181 AGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSGIPEQVEAPPAR-VP 240
           AGSNLE+TIQQIL MG G+WDRDTVVRALRAAYNNPERAVDYLYSGIPEQ+E PPA  VP
Sbjct: 181 AGSNLEDTIQQILLMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVP 240

Query: 241 STVQATNPS------AQPAQPAQPASVPSTGPNANPLDLFPQGVPNIASGAAGSGSLDFL 300
           STVQATNPS      AQPAQPAQPASV STGPNANPLDLFPQG+PNI+SGA GSGSLDFL
Sbjct: 241 STVQATNPSAQPAQPAQPAQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFL 300

Query: 301 RNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNIL 360
           RNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNIL
Sbjct: 301 RNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNIL 360

Query: 361 GQLAEAMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAANYLLDHIHEFE 418
           GQLAEAMPQAITVTPEEREAIQRLED+GFDR LVVEVFFACNKNEEMAANYLLDHIHEFE
Sbjct: 361 GQLAEAMPQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFE 409

[Close]

BLAST of CcUC05G105050 vs. TAIR 10
Match: AT3G02540.3 (Rad23 UV excision repair protein family )

HSP 1 Score: 482.3 bits (1240), Expect = 4.1e-136
Identity = 279/436 (63.99%), Postives = 323/436 (74.08%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60
           MKIFVKTLKG+HFEIEV+P D+V DVKKNIE+VQGADVYPAA+QMLIHQGKVLKD +T+E
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 61  ENKVAENSFIVIMLTKNKSTSGGTSSTTQAAPVSKVRNNNSMFHWLGAPQSTAPAHAATP 120
           ENKVAENSFIVIM+ K+K  S   SS +     +K                + P   + P
Sbjct: 61  ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAK----------------SIPPSTSQP 120

Query: 121 VLTSEVPLPTSAPPANV-TDSSPPAPAPAPAPA----------PAPAPAGAPTTTVLPES 180
            ++ + P   SAP A   T   PPAP P PAP           P P PA   ++T  P+S
Sbjct: 121 SISPQTPASVSAPVAPAPTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAPDS 180

Query: 181 ------DVYSQAASNLVAGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYL 240
                 DVY QAASNL AGSNLE TIQQILDMG G WDR+TVV ALRAA+NNPERAV+YL
Sbjct: 181 APVGQGDVYGQAASNLAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYL 240

Query: 241 YSGIPEQVEAPP-ARVPSTVQATNPSAQPAQPAQPASVPSTGPNANPLDLFPQGVPNIAS 300
           Y+GIPEQ E PP AR P++  A  P+  PAQ  QPA+ P++GPNANPLDLFPQG+PN+  
Sbjct: 241 YTGIPEQAEVPPVARPPAS--AGQPANPPAQTQQPAAAPASGPNANPLDLFPQGLPNV-G 300

Query: 301 GAAGSGSLDFLRNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLI 360
           G  G+G+LDFLRNS QFQALRAMV+ANPQ+LQPMLQELGKQNP L+RLIQDHQ DFLRLI
Sbjct: 301 GNPGAGTLDFLRNSQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLI 360

Query: 361 NEPLEG---EGNILGQLAEAM--PQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKN 414
           NEP+EG    GN+LGQ+A  M  PQAI VT EEREAI+RLE MGF+R LV+EVFFACNKN
Sbjct: 361 NEPVEGGGESGNLLGQMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKN 417

[Close]

BLAST of CcUC05G105050 vs. TAIR 10
Match: AT3G02540.1 (Rad23 UV excision repair protein family )

HSP 1 Score: 481.9 bits (1239), Expect = 5.3e-136
Identity = 279/437 (63.84%), Postives = 323/437 (73.91%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60
           MKIFVKTLKG+HFEIEV+P D+V DVKKNIE+VQGADVYPAA+QMLIHQGKVLKD +T+E
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 61  ENKVAENSFIVIMLTKNKSTSGGTSSTTQAAPVSKVRNNNSMFHWLGAPQSTAPAHAATP 120
           ENKVAENSFIVIM+ K+K  S   SS +     +K                + P   + P
Sbjct: 61  ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAK----------------SIPPSTSQP 120

Query: 121 VLTSEVPLPTSAPPANV-TDSSPPAPAPAPAPA----------PAPAPAGAPTTTVLPES 180
            ++ + P   SAP A   T   PPAP P PAP           P P PA   ++T  P+S
Sbjct: 121 SISPQTPASVSAPVAPAPTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAPDS 180

Query: 181 -------DVYSQAASNLVAGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDY 240
                  DVY QAASNL AGSNLE TIQQILDMG G WDR+TVV ALRAA+NNPERAV+Y
Sbjct: 181 APVGSQGDVYGQAASNLAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEY 240

Query: 241 LYSGIPEQVEAPP-ARVPSTVQATNPSAQPAQPAQPASVPSTGPNANPLDLFPQGVPNIA 300
           LY+GIPEQ E PP AR P++  A  P+  PAQ  QPA+ P++GPNANPLDLFPQG+PN+ 
Sbjct: 241 LYTGIPEQAEVPPVARPPAS--AGQPANPPAQTQQPAAAPASGPNANPLDLFPQGLPNV- 300

Query: 301 SGAAGSGSLDFLRNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRL 360
            G  G+G+LDFLRNS QFQALRAMV+ANPQ+LQPMLQELGKQNP L+RLIQDHQ DFLRL
Sbjct: 301 GGNPGAGTLDFLRNSQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRL 360

Query: 361 INEPLEG---EGNILGQLAEAM--PQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNK 414
           INEP+EG    GN+LGQ+A  M  PQAI VT EEREAI+RLE MGF+R LV+EVFFACNK
Sbjct: 361 INEPVEGGGESGNLLGQMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNK 418

[Close]

BLAST of CcUC05G105050 vs. TAIR 10
Match: AT5G38470.1 (Rad23 UV excision repair protein family )

HSP 1 Score: 473.4 bits (1217), Expect = 1.9e-133
Identity = 274/415 (66.02%), Postives = 313/415 (75.42%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60
           MKIFVKTL GS+FEIEV+PAD V+DVK  IETV+GA+ YPAA+QMLIHQGKVLKD +TLE
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 60

Query: 61  ENKVAENSFIVIMLTKNKSTSGGTSSTTQAAPVSKVRNNNSMFHWLGAPQSTAPAHAATP 120
           EN V ENSFIVIML+K K++  G S  T +AP               AP +T P   ATP
Sbjct: 61  ENNVVENSFIVIMLSKTKASPSGAS--TASAP---------------APSATQPQTVATP 120

Query: 121 VLTSEVPLPTSAPPANVTDSSPPAPAPAPAPAPAPAPAGAPTTTVLPESDVYSQAASNLV 180
                     SAP A+V           P P    A A AP T    ++DVY QAASNLV
Sbjct: 121 --------QVSAPTASV-----------PVPTSGTATAAAPATAASVQTDVYGQAASNLV 180

Query: 181 AGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSGIPEQVEAPP-ARVP 240
           AG+ LE T+QQILDMG G WDRDTVVRALRAA+NNPERAV+YLYSGIP Q E PP A+ P
Sbjct: 181 AGTTLESTVQQILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPAQAEIPPVAQAP 240

Query: 241 ST-VQATNPSAQPAQPAQPASVPSTGPNANPLDLFPQGVPNIASGAAGSGSLDFLRNSPQ 300
           +T  QA NP AQP Q A PA+  + GPNANPL+LFPQG+P  A   AG+G+LDFLRNS Q
Sbjct: 241 ATGEQAANPLAQPQQAAAPAAA-TGGPNANPLNLFPQGMP-AADAGAGAGNLDFLRNSQQ 300

Query: 301 FQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAE 360
           FQALRAMV+ANPQILQPMLQELGKQNPQL+RLIQ+HQ DFLRLINEP+EGE N++ QL  
Sbjct: 301 FQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVEGEENVMEQLEA 360

Query: 361 AMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAANYLLDHIHEFE 414
           AMPQA+TVTPEEREAI+RLE MGFDR +V+EVFFACNKNEE+AANYLLDH+HEFE
Sbjct: 361 AMPQAVTVTPEEREAIERLEGMGFDRAMVLEVFFACNKNEELAANYLLDHMHEFE 376

[Close]

BLAST of CcUC05G105050 vs. TAIR 10
Match: AT5G38470.2 (Rad23 UV excision repair protein family )

HSP 1 Score: 367.9 bits (943), Expect = 1.1e-101
Identity = 224/351 (63.82%), Postives = 255/351 (72.65%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60
           MKIFVKTL GS+FEIEV+PAD V+DVK  IETV+GA+ YPAA+QMLIHQGKVLKD +TLE
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 60

Query: 61  ENKVAENSFIVIMLTKNKSTSGGTSSTTQAAPVSKVRNNNSMFHWLGAPQSTAPAHAATP 120
           EN V ENSFIVIML+K K++  G S  T +AP               AP +T P   ATP
Sbjct: 61  ENNVVENSFIVIMLSKTKASPSGAS--TASAP---------------APSATQPQTVATP 120

Query: 121 VLTSEVPLPTSAPPANVTDSSPPAPAPAPAPAPAPAPAGAPTTTVLPESDVYSQAASNLV 180
                     SAP A+V           P P    A A AP T    ++DVY QAASNLV
Sbjct: 121 --------QVSAPTASV-----------PVPTSGTATAAAPATAASVQTDVYGQAASNLV 180

Query: 181 AGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSGIPEQVEAPP-ARVP 240
           AG+ LE T+QQILDMG G WDRDTVVRALRAA+NNPERAV+YLYSGIP Q E PP A+ P
Sbjct: 181 AGTTLESTVQQILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPAQAEIPPVAQAP 240

Query: 241 ST-VQATNPSAQPAQPAQPASVPSTGPNANPLDLFPQGVPNIASGAAGSGSLDFLRNSPQ 300
           +T  QA NP AQP Q A PA+  + GPNANPL+LFPQG+P  A   AG+G+LDFLRNS Q
Sbjct: 241 ATGEQAANPLAQPQQAAAPAAA-TGGPNANPLNLFPQGMP-AADAGAGAGNLDFLRNSQQ 300

Query: 301 FQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGE 350
           FQALRAMV+ANPQILQPMLQELGKQNPQL+RLIQ+HQ DFLRLINEP+EGE
Sbjct: 301 FQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVEGE 312

[Close]

BLAST of CcUC05G105050 vs. TAIR 10
Match: AT1G79650.2 (Rad23 UV excision repair protein family )

HSP 1 Score: 362.8 bits (930), Expect = 3.6e-100
Identity = 220/417 (52.76%), Postives = 271/417 (64.99%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60
           MK+ VKTLKGSHFEI V P+DT+  VKKNIE  QG D YP  QQ+LIH GKVLKD ++L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVAENSFIVIMLTKNKSTSGGTSSTTQAAPVSKVRNNNSMFHWLGAPQSTAPAHAATP 120
           ENKV E  F+V+ML+K+K  SGG++      PVS                ST PA  +T 
Sbjct: 61  ENKVTEEGFLVVMLSKSK--SGGSAGQASVQPVS------------ATTSSTKPAAPST- 120

Query: 121 VLTSEVPLPTSAPPANVTDSSPPAPAPAPAPAPAPAPAGAPTTTVLPESDVYSQAASNLV 180
                            T SSP   +P PA     A           ++D Y QAAS LV
Sbjct: 121 -----------------TQSSPVPASPIPAQEQPAA-----------QTDTYGQAASTLV 180

Query: 181 AGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSGIPEQVEAPPARVPS 240
           +GS+LE+ +QQI++MG G WD++TV RALRAAYNNPERAVDYLYSGIP+  E        
Sbjct: 181 SGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAE-------- 240

Query: 241 TVQATNPSAQPA-QPAQPASVPSTGPNANPLDLFPQGVPNIASGAAGSGSLDFLRNSPQF 300
            V    P AQ A   A P +  S GPN++PLDLFPQ     A+G+   G+L+FLRN+ QF
Sbjct: 241 -VAVPVPEAQIAGSGAAPVAPASGGPNSSPLDLFPQETV-AAAGSGDLGTLEFLRNNDQF 300

Query: 301 QALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLE---GEGNILGQL 360
           Q LR MV +NPQILQPMLQELGKQNPQL+RLIQ++Q +FL+L+NEP E   GEG++  Q 
Sbjct: 301 QQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQP 360

Query: 361 AEAMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAANYLLDHIHEFE 414
            + MP AI VTP E+EAIQRLE MGFDR LV+E F AC++NEE+AANYLL++  +FE
Sbjct: 361 EQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFE 364

The following BLAST results are available for this feature:

BLAST of CcUC05G105050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892724.1	1.2e-201	93.29	ubiquitin receptor RAD23d [Benincasa hispida]	[more]
XP_008446578.1	1.4e-199	89.17	PREDICTED: ubiquitin receptor RAD23c-like [Cucumis melo]	[more]
XP_011655771.1	9.2e-199	88.43	ubiquitin receptor RAD23d [Cucumis sativus] >KGN52072.1 hypothetical protein Csa...	[more]
KAG6601319.1	1.7e-192	88.76	Ubiquitin receptor RAD23c, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7032103.1	1.1e-191	87.97	Ubiquitin receptor RAD23c [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CcUC05G105050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84L31	7.4e-135	63.84	Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2	[more]
Q84L30	2.6e-132	66.02	Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2	[more]
Q40742	4.0e-112	57.31	Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RA...	[more]
Q84L33	3.3e-98	52.76	Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3	[more]
Q84L32	8.9e-96	50.96	Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=...	[more]

BLAST of CcUC05G105050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BEW2	6.9e-200	89.17	Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103489268 PE=3 SV=1	[more]
A0A0A0KUH2	4.4e-199	88.43	Ubiquitin receptor RAD23 OS=Cucumis sativus OX=3659 GN=Csa_5G608600 PE=3 SV=1	[more]
A0A6J1G0H9	9.0e-192	87.50	Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111449587 PE=3 SV=1	[more]
A0A6J1GXU6	7.6e-191	87.50	Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111458469 PE=3 SV=1	[more]
A0A6J1IZ65	9.9e-191	87.74	Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111479749 PE=3 SV=1	[more]

BLAST of CcUC05G105050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02540.3	4.1e-136	63.99	Rad23 UV excision repair protein family	[more]
AT3G02540.1	5.3e-136	63.84	Rad23 UV excision repair protein family	[more]
AT5G38470.1	1.9e-133	66.02	Rad23 UV excision repair protein family	[more]
AT5G38470.2	1.1e-101	63.82	Rad23 UV excision repair protein family	[more]
AT1G79650.2	3.6e-100	52.76	Rad23 UV excision repair protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004806	UV excision repair protein Rad23	PRINTS	PR01839	RAD23PROTEIN	coord: 316..338 score: 58.89 coord: 381..395 score: 60.3 coord: 364..380 score: 61.5 coord: 396..411 score: 61.36
IPR004806	UV excision repair protein Rad23	TIGRFAM	TIGR00601	TIGR00601	coord: 1..413 e-value: 6.3E-117 score: 388.9
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 185..225 e-value: 3.6E-7 score: 39.8 coord: 370..407 e-value: 1.5E-9 score: 47.7
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 185..223 e-value: 8.9E-15 score: 54.2 coord: 370..405 e-value: 3.6E-11 score: 42.7
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 367..408 score: 14.9807
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 183..226 score: 13.390292
IPR006636	Heat shock chaperonin-binding	SMART	SM00727	CBM	coord: 288..331 e-value: 6.6E-6 score: 35.6
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 1..75 e-value: 4.0E-22 score: 89.5
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 3..76 e-value: 3.0E-19 score: 68.6
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..79 score: 20.087015
None	No IPR available	GENE3D	1.10.8.10		coord: 362..409 e-value: 2.7E-23 score: 83.7
None	No IPR available	GENE3D	1.10.8.10		coord: 178..228 e-value: 3.2E-22 score: 80.1
None	No IPR available	GENE3D	3.10.20.90		coord: 1..80 e-value: 3.9E-29 score: 102.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..269
None	No IPR available	PANTHER	PTHR10621:SF50	UV EXCISION REPAIR PROTEIN RAD23-RELATED	coord: 1..414
None	No IPR available	PANTHER	PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	coord: 1..414
None	No IPR available	CDD	cd14379	UBA1_Rad23_plant	coord: 179..228 e-value: 1.42086E-29 score: 106.928
None	No IPR available	CDD	cd01805	Ubl_Rad23	coord: 1..74 e-value: 2.80387E-32 score: 114.962
IPR036353	XPC-binding domain superfamily	GENE3D	1.10.10.540		coord: 280..345 e-value: 1.9E-27 score: 96.6
IPR036353	XPC-binding domain superfamily	SUPERFAMILY	101238	XPC-binding domain	coord: 286..351
IPR015360	XPC-binding domain	PFAM	PF09280	XPC-binding	coord: 290..345 e-value: 3.8E-22 score: 77.8
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 170..229
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 350..412
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G105050.1	CcUC05G105050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding
molecular_function	GO:0070628	proteasome binding
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0005515	protein binding