CcUC05G105040 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAATCAAAATTCCAACAAGCGGGATCGGGACGACTCGGCCGAGTCGGAGGCCGGTTCGCCCGAGGTGAAGCGGCTCAGAGACGACCTCCTTGGTTTTTTCGACGACTCCGATCCTGAACCAGCGACTCAGGATCTCGACTCATTGATGAGAAGCTTCGAGGAAGAAATCGCTACCGCATCGTCTTCTCCGGTGCCGGTGGTAGATTTGACGCCGGATTCCGGTGAGTCCCAGCCGGAGTTAGGTTACCTCTTGGAAGCCTCAGACGACGAGCTCGGTCTGCCGCCTTCCAATAGCCGACAGGAGTTTGCTCGAGTATCGACTGATTCGTCCGAGATCGGTGAGATGTGGAGGTTTGAGGATCAGATCCCGAACTACGATGCTTTCGAACTGGAAGGTGGAGATGTGTATAGCGGCAGCGACACGGCGGAGTATGTGGCGTTCGATGGACTGATGGAGTATTCGAATCTGTGTTTTGATTCGTCGGATAGCTCGGATTTTCTTTGGCGGCAAGAATCTCTGCCGGCGCAGTAG ATGGAGAATCAAAATTCCAACAAGCGGGATCGGGACGACTCGGCCGAGTCGGAGGCCGGTTCGCCCGAGGTGAAGCGGCTCAGAGACGACCTCCTTGGTTTTTTCGACGACTCCGATCCTGAACCAGCGACTCAGGATCTCGACTCATTGATGAGAAGCTTCGAGGAAGAAATCGCTACCGCATCGTCTTCTCCGGTGCCGGTGGTAGATTTGACGCCGGATTCCGGTGAGTCCCAGCCGGAGTTAGGTTACCTCTTGGAAGCCTCAGACGACGAGCTCGGTCTGCCGCCTTCCAATAGCCGACAGGAGTTTGCTCGAGTATCGACTGATTCGTCCGAGATCGGTGAGATGTGGAGGTTTGAGGATCAGATCCCGAACTACGATGCTTTCGAACTGGAAGGTGGAGATGTGTATAGCGGCAGCGACACGGCGGAGTATGTGGCGTTCGATGGACTGATGGAGTATTCGAATCTGTGTTTTGATTCGTCGGATAGCTCGGATTTTCTTTGGCGGCAAGAATCTCTGCCGGCGCAGTAG ATGGAGAATCAAAATTCCAACAAGCGGGATCGGGACGACTCGGCCGAGTCGGAGGCCGGTTCGCCCGAGGTGAAGCGGCTCAGAGACGACCTCCTTGGTTTTTTCGACGACTCCGATCCTGAACCAGCGACTCAGGATCTCGACTCATTGATGAGAAGCTTCGAGGAAGAAATCGCTACCGCATCGTCTTCTCCGGTGCCGGTGGTAGATTTGACGCCGGATTCCGGTGAGTCCCAGCCGGAGTTAGGTTACCTCTTGGAAGCCTCAGACGACGAGCTCGGTCTGCCGCCTTCCAATAGCCGACAGGAGTTTGCTCGAGTATCGACTGATTCGTCCGAGATCGGTGAGATGTGGAGGTTTGAGGATCAGATCCCGAACTACGATGCTTTCGAACTGGAAGGTGGAGATGTGTATAGCGGCAGCGACACGGCGGAGTATGTGGCGTTCGATGGACTGATGGAGTATTCGAATCTGTGTTTTGATTCGTCGGATAGCTCGGATTTTCTTTGGCGGCAAGAATCTCTGCCGGCGCAGTAG MENQNSNKRDRDDSAESEAGSPEVKRLRDDLLGFFDDSDPEPATQDLDSLMRSFEEEIATASSSPVPVVDLTPDSGESQPELGYLLEASDDELGLPPSNSRQEFARVSTDSSEIGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLMEYSNLCFDSSDSSDFLWRQESLPAQ Homology
BLAST of CcUC05G105040 vs. NCBI nr
Match: XP_008446589.1 (PREDICTED: uncharacterized protein LOC103489276 [Cucumis melo] >KAA0034548.1 uncharacterized protein E6C27_scaffold65G005630 [Cucumis melo var. makuwa] >TYK09102.1 uncharacterized protein E5676_scaffold475G00920 [Cucumis melo var. makuwa]) HSP 1 Score: 334.7 bits (857), Expect = 4.8e-88 Identity = 168/178 (94.38%), Postives = 175/178 (98.31%), Query Frame = 0
BLAST of CcUC05G105040 vs. NCBI nr
Match: XP_038891554.1 (uncharacterized protein LOC120080940 [Benincasa hispida]) HSP 1 Score: 330.5 bits (846), Expect = 9.0e-87 Identity = 167/178 (93.82%), Postives = 174/178 (97.75%), Query Frame = 0
BLAST of CcUC05G105040 vs. NCBI nr
Match: XP_004135103.1 (uncharacterized protein LOC101221594 [Cucumis sativus] >KGN52073.1 hypothetical protein Csa_007819 [Cucumis sativus]) HSP 1 Score: 327.0 bits (837), Expect = 1.0e-85 Identity = 164/178 (92.13%), Postives = 172/178 (96.63%), Query Frame = 0
BLAST of CcUC05G105040 vs. NCBI nr
Match: KAG7013029.1 (hypothetical protein SDJN02_25785, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 301.2 bits (770), Expect = 5.9e-78 Identity = 162/190 (85.26%), Postives = 170/190 (89.47%), Query Frame = 0
BLAST of CcUC05G105040 vs. NCBI nr
Match: KAG6573972.1 (hypothetical protein SDJN03_27859, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 300.4 bits (768), Expect = 1.0e-77 Identity = 162/190 (85.26%), Postives = 169/190 (88.95%), Query Frame = 0
BLAST of CcUC05G105040 vs. ExPASy TrEMBL
Match: A0A5A7SV83 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00920 PE=4 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 2.3e-88 Identity = 168/178 (94.38%), Postives = 175/178 (98.31%), Query Frame = 0
BLAST of CcUC05G105040 vs. ExPASy TrEMBL
Match: A0A1S3BEX2 (uncharacterized protein LOC103489276 OS=Cucumis melo OX=3656 GN=LOC103489276 PE=4 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 2.3e-88 Identity = 168/178 (94.38%), Postives = 175/178 (98.31%), Query Frame = 0
BLAST of CcUC05G105040 vs. ExPASy TrEMBL
Match: A0A0A0KR57 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608610 PE=4 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 4.8e-86 Identity = 164/178 (92.13%), Postives = 172/178 (96.63%), Query Frame = 0
BLAST of CcUC05G105040 vs. ExPASy TrEMBL
Match: A0A6J1HYB6 (uncharacterized protein LOC111467364 OS=Cucurbita maxima OX=3661 GN=LOC111467364 PE=4 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 2.4e-77 Identity = 160/190 (84.21%), Postives = 169/190 (88.95%), Query Frame = 0
BLAST of CcUC05G105040 vs. ExPASy TrEMBL
Match: A0A6J1G1T4 (uncharacterized protein LOC111449910 OS=Cucurbita moschata OX=3662 GN=LOC111449910 PE=4 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 2.4e-77 Identity = 161/190 (84.74%), Postives = 169/190 (88.95%), Query Frame = 0
BLAST of CcUC05G105040 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 151.0 bits (380), Expect = 9.1e-37 Identity = 90/187 (48.13%), Postives = 117/187 (62.57%), Query Frame = 0
BLAST of CcUC05G105040 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 126.7 bits (317), Expect = 1.8e-29 Identity = 76/168 (45.24%), Postives = 102/168 (60.71%), Query Frame = 0
BLAST of CcUC05G105040 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 124.4 bits (311), Expect = 9.2e-29 Identity = 75/165 (45.45%), Postives = 100/165 (60.61%), Query Frame = 0
BLAST of CcUC05G105040 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 117.5 bits (293), Expect = 1.1e-26 Identity = 82/185 (44.32%), Postives = 104/185 (56.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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