CcUC05G105030 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G105030
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	protein NIM1-INTERACTING 2
Location	CicolChr05: 32561041 .. 32561520 (+)
RNA-Seq Expression	CcUC05G105030
Synteny	CcUC05G105030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATTTGAGTTGTTTCCGGCGAGTCGGAGTACGGAGAGAGGGAAAAGAAAGCAGGTAGACGACGCCGGGTCGGATAGCCAGAAGGATGCGGTGGCGGACAGAGGAAAAGAAGCGGAGACGGCGTCGGATGAAGAGGTGAAGGAGTTCTTCTCCATTCTGAAGCGATTACACGCGGCGTCGAAACACATAGAGAAAATCGACGGTGCGAGCCGTTTATTGATGGGAAAGAGATCGAGGCCGACGAAGTCGAGCGAGGAAGAAGCCGACAAAGTCGAAATTAGGGCAGAGAGAATTCCAGGGCACAAATTGGACAGAAATTTGGATCTGGATCTTAACTTAGAACCTGTATGCGTCGAATCGGATGGTAAAACAAGCCGGTGTCTGAATCCGAAGCCGGCGCCCGAATCCGAAGCCGGAGTACGTCGATTCGGCCGCCGATTCTTGCTGGATATTGAAATTTCCGACACAGATGAATGA

mRNA sequence

ATGCCATTTGAGTTGTTTCCGGCGAGTCGGAGTACGGAGAGAGGGAAAAGAAAGCAGGTAGACGACGCCGGGTCGGATAGCCAGAAGGATGCGGTGGCGGACAGAGGAAAAGAAGCGGAGACGGCGTCGGATGAAGAGGTGAAGGAGTTCTTCTCCATTCTGAAGCGATTACACGCGGCGTCGAAACACATAGAGAAAATCGACGGTGCGAGCCGTTTATTGATGGGAAAGAGATCGAGGCCGACGAAGTCGAGCGAGGAAGAAGCCGACAAAGTCGAAATTAGGGCAGAGAGAATTCCAGGGCACAAATTGGACAGAAATTTGGATCTGGATCTTAACTTAGAACCTGTATGCGTCGAATCGGATGGTAAAACAAGCCGGTGTCTGAATCCGAAGCCGGCGCCCGAATCCGAAGCCGGAGTACGTCGATTCGGCCGCCGATTCTTGCTGGATATTGAAATTTCCGACACAGATGAATGA

Coding sequence (CDS)

ATGCCATTTGAGTTGTTTCCGGCGAGTCGGAGTACGGAGAGAGGGAAAAGAAAGCAGGTAGACGACGCCGGGTCGGATAGCCAGAAGGATGCGGTGGCGGACAGAGGAAAAGAAGCGGAGACGGCGTCGGATGAAGAGGTGAAGGAGTTCTTCTCCATTCTGAAGCGATTACACGCGGCGTCGAAACACATAGAGAAAATCGACGGTGCGAGCCGTTTATTGATGGGAAAGAGATCGAGGCCGACGAAGTCGAGCGAGGAAGAAGCCGACAAAGTCGAAATTAGGGCAGAGAGAATTCCAGGGCACAAATTGGACAGAAATTTGGATCTGGATCTTAACTTAGAACCTGTATGCGTCGAATCGGATGGTAAAACAAGCCGGTGTCTGAATCCGAAGCCGGCGCCCGAATCCGAAGCCGGAGTACGTCGATTCGGCCGCCGATTCTTGCTGGATATTGAAATTTCCGACACAGATGAATGA

Protein sequence

MPFELFPASRSTERGKRKQVDDAGSDSQKDAVADRGKEAETASDEEVKEFFSILKRLHAASKHIEKIDGASRLLMGKRSRPTKSSEEEADKVEIRAERIPGHKLDRNLDLDLNLEPVCVESDGKTSRCLNPKPAPESEAGVRRFGRRFLLDIEISDTDE

Homology

[Close]

BLAST of CcUC05G105030 vs. NCBI nr
Match: XP_038892789.1 (protein NIM1-INTERACTING 2 [Benincasa hispida])

HSP 1 Score: 217.6 bits (553), Expect = 7.6e-53
Identity = 113/132 (85.61%), Postives = 124/132 (93.94%), Query Frame = 0


Query: 1   MPFELFPASRSTERGKRKQVDDAGSDSQKDAVADRGKEAETASDEEVKEFFSILKRLHAA 60
           MPFELFPASRST+RGKRK+ DDAG+ SQ+DAVADRGKEAETA+DEEV+EFFSILKRLHAA
Sbjct: 1   MPFELFPASRSTDRGKRKREDDAGTGSQRDAVADRGKEAETATDEEVEEFFSILKRLHAA 60

Query: 61  SKHIEKIDGASRLLMGKRSRPTKSSEEEADKVEIRAERIPGHKLDRNLDLDLNLEPVCVE 120
           +K+IEKIDGASRLLMGKRS+PTKSSEEEAD+VEIRAE+IP HKLDRNLDLDLNLEP CVE
Sbjct: 61  TKYIEKIDGASRLLMGKRSKPTKSSEEEADEVEIRAEKIPDHKLDRNLDLDLNLEPACVE 120

Query: 121 SDGKTSRCLNPK 133
           SD KTSR  N K
Sbjct: 121 SDDKTSRSQNLK 132

[Close]

BLAST of CcUC05G105030 vs. NCBI nr
Match: KGN52074.1 (hypothetical protein Csa_008594 [Cucumis sativus])

HSP 1 Score: 193.4 bits (490), Expect = 1.5e-45
Identity = 101/134 (75.37%), Postives = 116/134 (86.57%), Query Frame = 0


Query: 1   MPFELFPASRSTERGKRKQVDDAGSDSQKDAVADRGKEAETASDEEVKEFFSILKRLHAA 60
           MPFELFPASRSTERGKRK+ DDAG  +QKD  A+ G+EAETA+DEEV+EFFSILKRLHAA
Sbjct: 1   MPFELFPASRSTERGKRKRGDDAGVGNQKDVGAEEGREAETATDEEVEEFFSILKRLHAA 60

Query: 61  SKHIEKIDGASRLLMGKRSRPTKSSEEEADKVEIRAERIPGHKLDRNLDLDLNLEPVCVE 120
           +K+IEKIDGAS LLMGKR +P KS+EEE D+V I+AERIP  KLDRNLDLDLNLEPVCVE
Sbjct: 61  TKYIEKIDGASHLLMGKRPKPMKSNEEEGDEVGIKAERIPEQKLDRNLDLDLNLEPVCVE 120

Query: 121 SDGKTSRCLNPKPA 135
           S+GK+    N KP+
Sbjct: 121 SEGKSRERQNRKPS 134

[Close]

BLAST of CcUC05G105030 vs. NCBI nr
Match: XP_008446591.1 (PREDICTED: protein NIM1-INTERACTING 2 [Cucumis melo] >KAA0034549.1 protein NIM1-INTERACTING 2 [Cucumis melo var. makuwa] >TYK09103.1 protein NIM1-INTERACTING 2 [Cucumis melo var. makuwa])

HSP 1 Score: 192.6 bits (488), Expect = 2.6e-45
Identity = 102/141 (72.34%), Postives = 117/141 (82.98%), Query Frame = 0


Query: 1   MPFELFPASRSTERGKRKQVDDAGSDSQKDAVADRGKEAETASDEEVKEFFSILKRLHAA 60
           MPFELFP SRST+RGKRK+ DDAG+ +QKD V   GKEAETA+DEEV+EFFSILKRLHAA
Sbjct: 1   MPFELFPGSRSTDRGKRKRGDDAGAGNQKDVVTKEGKEAETATDEEVEEFFSILKRLHAA 60

Query: 61  SKHIEKIDGASRLLMGKRSRPTKSSEEEADKVEIRAERIPGHKLDRNLDLDLNLEPVCVE 120
           +K+IEKIDGAS LLMGKRS+  KS+EEE D+V IR ERIP  KLDRNLDLDLNLEPVCVE
Sbjct: 61  TKYIEKIDGASHLLMGKRSKRMKSNEEERDEVGIRVERIPEQKLDRNLDLDLNLEPVCVE 120

Query: 121 SDGKTSRCLNPKPAPESEAGV 142
           S+GK+ +  N KP+    A V
Sbjct: 121 SEGKSRQSQNLKPSCVDSAAV 141

[Close]

BLAST of CcUC05G105030 vs. NCBI nr
Match: XP_023542001.1 (uncharacterized protein LOC111801981 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 158.3 bits (399), Expect = 5.5e-35
Identity = 88/135 (65.19%), Postives = 104/135 (77.04%), Query Frame = 0


Query: 1   MPFELFPASRSTERGKRKQVDD--------AGSDSQKDAVADRGKEAETASDEEVKEFFS 60
           MPFELFP+SR T+RGKRK+           A + +QK+ VA+RG E E  SDEEV+EFF+
Sbjct: 1   MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFA 60

Query: 61  ILKRLHAASKHIEKIDGASRLLMGKRSRPTKSSEEEADKVEIRAERIPGHKLDRNLDLDL 120
           ILKRLHAA+K+IEKIDGA  LLMGKR++  K+SE+E D VEIR +RIP  KLDRNLDLDL
Sbjct: 61  ILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVEIRTKRIPDQKLDRNLDLDL 120

Query: 121 NLEPVCVESDGKTSR 128
           NLEP CVESDGK  R
Sbjct: 121 NLEPTCVESDGKERR 134

[Close]

BLAST of CcUC05G105030 vs. NCBI nr
Match: KAG6573971.1 (hypothetical protein SDJN03_27858, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013028.1 hypothetical protein SDJN02_25784, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 149.1 bits (375), Expect = 3.3e-32
Identity = 87/137 (63.50%), Postives = 103/137 (75.18%), Query Frame = 0


Query: 1   MPFELFPASRSTERGKRKQVDD--------AGSDSQKDAVADRGKEAETASDEEVKEFFS 60
           MPFELFP+SR T+RGKRK+           A + +QK+ VA+RG E E  SDEEV+EFF+
Sbjct: 1   MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFA 60

Query: 61  ILKRLHAASKHIEKIDGASRLLMGKRSRPTKSSEEEADKVEIRAERIPGHKLDRN--LDL 120
           ILKRLHAA+K+IEKIDGA  LLMGKR++  K+SE+E D VEIR +RIP  KLDRN  LDL
Sbjct: 61  ILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVEIRTKRIPEQKLDRNLDLDL 120

Query: 121 DLNLEPVCVESDGKTSR 128
           DLNLEP  VESDGK  R
Sbjct: 121 DLNLEPASVESDGKERR 136

[Close]

BLAST of CcUC05G105030 vs. ExPASy TrEMBL
Match: A0A0A0KT67 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609110 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 7.4e-46
Identity = 101/134 (75.37%), Postives = 116/134 (86.57%), Query Frame = 0


Query: 1   MPFELFPASRSTERGKRKQVDDAGSDSQKDAVADRGKEAETASDEEVKEFFSILKRLHAA 60
           MPFELFPASRSTERGKRK+ DDAG  +QKD  A+ G+EAETA+DEEV+EFFSILKRLHAA
Sbjct: 1   MPFELFPASRSTERGKRKRGDDAGVGNQKDVGAEEGREAETATDEEVEEFFSILKRLHAA 60

Query: 61  SKHIEKIDGASRLLMGKRSRPTKSSEEEADKVEIRAERIPGHKLDRNLDLDLNLEPVCVE 120
           +K+IEKIDGAS LLMGKR +P KS+EEE D+V I+AERIP  KLDRNLDLDLNLEPVCVE
Sbjct: 61  TKYIEKIDGASHLLMGKRPKPMKSNEEEGDEVGIKAERIPEQKLDRNLDLDLNLEPVCVE 120

Query: 121 SDGKTSRCLNPKPA 135
           S+GK+    N KP+
Sbjct: 121 SEGKSRERQNRKPS 134

[Close]

BLAST of CcUC05G105030 vs. ExPASy TrEMBL
Match: A0A5A7SZN6 (Protein NIM1-INTERACTING 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00930 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.3e-45
Identity = 102/141 (72.34%), Postives = 117/141 (82.98%), Query Frame = 0


Query: 1   MPFELFPASRSTERGKRKQVDDAGSDSQKDAVADRGKEAETASDEEVKEFFSILKRLHAA 60
           MPFELFP SRST+RGKRK+ DDAG+ +QKD V   GKEAETA+DEEV+EFFSILKRLHAA
Sbjct: 1   MPFELFPGSRSTDRGKRKRGDDAGAGNQKDVVTKEGKEAETATDEEVEEFFSILKRLHAA 60

Query: 61  SKHIEKIDGASRLLMGKRSRPTKSSEEEADKVEIRAERIPGHKLDRNLDLDLNLEPVCVE 120
           +K+IEKIDGAS LLMGKRS+  KS+EEE D+V IR ERIP  KLDRNLDLDLNLEPVCVE
Sbjct: 61  TKYIEKIDGASHLLMGKRSKRMKSNEEERDEVGIRVERIPEQKLDRNLDLDLNLEPVCVE 120

Query: 121 SDGKTSRCLNPKPAPESEAGV 142
           S+GK+ +  N KP+    A V
Sbjct: 121 SEGKSRQSQNLKPSCVDSAAV 141

[Close]

BLAST of CcUC05G105030 vs. ExPASy TrEMBL
Match: A0A1S3BFE7 (protein NIM1-INTERACTING 2 OS=Cucumis melo OX=3656 GN=LOC103489277 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.3e-45
Identity = 102/141 (72.34%), Postives = 117/141 (82.98%), Query Frame = 0


Query: 1   MPFELFPASRSTERGKRKQVDDAGSDSQKDAVADRGKEAETASDEEVKEFFSILKRLHAA 60
           MPFELFP SRST+RGKRK+ DDAG+ +QKD V   GKEAETA+DEEV+EFFSILKRLHAA
Sbjct: 1   MPFELFPGSRSTDRGKRKRGDDAGAGNQKDVVTKEGKEAETATDEEVEEFFSILKRLHAA 60

Query: 61  SKHIEKIDGASRLLMGKRSRPTKSSEEEADKVEIRAERIPGHKLDRNLDLDLNLEPVCVE 120
           +K+IEKIDGAS LLMGKRS+  KS+EEE D+V IR ERIP  KLDRNLDLDLNLEPVCVE
Sbjct: 61  TKYIEKIDGASHLLMGKRSKRMKSNEEERDEVGIRVERIPEQKLDRNLDLDLNLEPVCVE 120

Query: 121 SDGKTSRCLNPKPAPESEAGV 142
           S+GK+ +  N KP+    A V
Sbjct: 121 SEGKSRQSQNLKPSCVDSAAV 141

[Close]

BLAST of CcUC05G105030 vs. ExPASy TrEMBL
Match: A0A6J1FZ89 (uncharacterized protein LOC111449260 OS=Cucurbita moschata OX=3662 GN=LOC111449260 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 3.6e-32
Identity = 86/137 (62.77%), Postives = 103/137 (75.18%), Query Frame = 0


Query: 1   MPFELFPASRSTERGKRKQVDD--------AGSDSQKDAVADRGKEAETASDEEVKEFFS 60
           MPFELFP+SR T+RGKRK+           A + +QK+ VA+RG E +  SDEEV+EFF+
Sbjct: 1   MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNERQMTSDEEVEEFFA 60

Query: 61  ILKRLHAASKHIEKIDGASRLLMGKRSRPTKSSEEEADKVEIRAERIPGHKLDRN--LDL 120
           ILKRLHAA+K+IEKIDGA  LLMGKR++  K+SE+E D VEIR +RIP  KLDRN  LDL
Sbjct: 61  ILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVEIRTKRIPEQKLDRNLDLDL 120

Query: 121 DLNLEPVCVESDGKTSR 128
           DLNLEP  VESDGK  R
Sbjct: 121 DLNLEPASVESDGKERR 136

[Close]

BLAST of CcUC05G105030 vs. ExPASy TrEMBL
Match: A0A6J1HXL3 (uncharacterized protein LOC111467566 OS=Cucurbita maxima OX=3661 GN=LOC111467566 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 6.3e-29
Identity = 82/138 (59.42%), Postives = 99/138 (71.74%), Query Frame = 0


Query: 1   MPFELFPASRSTERGKRK---------QVDDAGSDSQKDAVADRGKEAETASDEEVKEFF 60
           MPFELFP+SR+ +RGKRK         +   A + +QK  VADRGKE E  SDEEV+EFF
Sbjct: 1   MPFELFPSSRA-DRGKRKRERGEHADYEAAAADAGNQKKTVADRGKEREMTSDEEVEEFF 60

Query: 61  SILKRLHAASKHIEKIDGASRLLMGKRSRPTKSSEEEADKVEIRAERIPGHKLDRN--LD 120
           +ILKRLHAA+K+IEKIDGA   LMGKR++  K+SE+E D VEIR +RIP  KLDRN  LD
Sbjct: 61  TILKRLHAATKYIEKIDGARSFLMGKRAKTAKASEKEGDGVEIRTKRIPEQKLDRNLDLD 120

Query: 121 LDLNLEPVCVESDGKTSR 128
           LDLNLEP   +S   + R
Sbjct: 121 LDLNLEPASDDSAADSRR 137

The following BLAST results are available for this feature:

BLAST of CcUC05G105030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892789.1	7.6e-53	85.61	protein NIM1-INTERACTING 2 [Benincasa hispida]	[more]
KGN52074.1	1.5e-45	75.37	hypothetical protein Csa_008594 [Cucumis sativus]	[more]
XP_008446591.1	2.6e-45	72.34	PREDICTED: protein NIM1-INTERACTING 2 [Cucumis melo] >KAA0034549.1 protein NIM1-...	[more]
XP_023542001.1	5.5e-35	65.19	uncharacterized protein LOC111801981 [Cucurbita pepo subsp. pepo]	[more]
KAG6573971.1	3.3e-32	63.50	hypothetical protein SDJN03_27858, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CcUC05G105030 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC05G105030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KT67	7.4e-46	75.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609110 PE=4 SV=1	[more]
A0A5A7SZN6	1.3e-45	72.34	Protein NIM1-INTERACTING 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BFE7	1.3e-45	72.34	protein NIM1-INTERACTING 2 OS=Cucumis melo OX=3656 GN=LOC103489277 PE=4 SV=1	[more]
A0A6J1FZ89	3.6e-32	62.77	uncharacterized protein LOC111449260 OS=Cucurbita moschata OX=3662 GN=LOC1114492...	[more]
A0A6J1HXL3	6.3e-29	59.42	uncharacterized protein LOC111467566 OS=Cucurbita maxima OX=3661 GN=LOC111467566...	[more]

BLAST of CcUC05G105030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	PANTHER	PTHR35735:SF8	PROTEIN NIM1-INTERACTING 2	coord: 13..121
IPR034577	Protein NIM1-INTERACTING 2	PANTHER	PTHR35735	PROTEIN NIM1-INTERACTING 2	coord: 13..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G105030.1	CcUC05G105030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010112	regulation of systemic acquired resistance