CcUC05G104800 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC05G104800
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr05: 32384884 .. 32385351 (-)
RNA-Seq ExpressionCcUC05G104800
SyntenyCcUC05G104800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGTCTAAAAGCCCACCCATCCTCCAAAAGCTTTCAAATTTCCTCAAACTTTCCATCTTTATCGCCAAAATGAAAAGACCCATCATTCCAAACCTCCTTTTCTTCAGGAAATCATTCAGGTCAAACAACTTCGAGCTCCTTCAGCACTATAATTATAGGTTTCTTCCAGACTTCCAATTCTCCCCTTCCACCACTCCTCTGTTTCGTTTTTACAAAGGCCGCCGCCGCCTCCGCCTCCGCCTCCACGATGTCTATTCGGTGCTGTTTCCTTGCAGATGTATTGGTAGTTCTGGAGCTGGAAACGAAGAAGATGGAGATCACGGCGAAGCTTTTCCGGCCATTGAAGGGCGGTTTCCGGACTCGTTGGATTGGAGCGATGACGATGATTCAATTGATCGGAGGGCTGAACTTTTCATTCAGAAATTCTACGCGGATATGAAAATGGAGAGGCTAGCATCGATTTGA

mRNA sequence

ATGCAGTCTAAAAGCCCACCCATCCTCCAAAAGCTTTCAAATTTCCTCAAACTTTCCATCTTTATCGCCAAAATGAAAAGACCCATCATTCCAAACCTCCTTTTCTTCAGGAAATCATTCAGGTCAAACAACTTCGAGCTCCTTCAGCACTATAATTATAGGTTTCTTCCAGACTTCCAATTCTCCCCTTCCACCACTCCTCTGTTTCGTTTTTACAAAGGCCGCCGCCGCCTCCGCCTCCGCCTCCACGATGTCTATTCGGTGCTGTTTCCTTGCAGATGTATTGGTAGTTCTGGAGCTGGAAACGAAGAAGATGGAGATCACGGCGAAGCTTTTCCGGCCATTGAAGGGCGGTTTCCGGACTCGTTGGATTGGAGCGATGACGATGATTCAATTGATCGGAGGGCTGAACTTTTCATTCAGAAATTCTACGCGGATATGAAAATGGAGAGGCTAGCATCGATTTGA

Coding sequence (CDS)

ATGCAGTCTAAAAGCCCACCCATCCTCCAAAAGCTTTCAAATTTCCTCAAACTTTCCATCTTTATCGCCAAAATGAAAAGACCCATCATTCCAAACCTCCTTTTCTTCAGGAAATCATTCAGGTCAAACAACTTCGAGCTCCTTCAGCACTATAATTATAGGTTTCTTCCAGACTTCCAATTCTCCCCTTCCACCACTCCTCTGTTTCGTTTTTACAAAGGCCGCCGCCGCCTCCGCCTCCGCCTCCACGATGTCTATTCGGTGCTGTTTCCTTGCAGATGTATTGGTAGTTCTGGAGCTGGAAACGAAGAAGATGGAGATCACGGCGAAGCTTTTCCGGCCATTGAAGGGCGGTTTCCGGACTCGTTGGATTGGAGCGATGACGATGATTCAATTGATCGGAGGGCTGAACTTTTCATTCAGAAATTCTACGCGGATATGAAAATGGAGAGGCTAGCATCGATTTGA

Protein sequence

MQSKSPPILQKLSNFLKLSIFIAKMKRPIIPNLLFFRKSFRSNNFELLQHYNYRFLPDFQFSPSTTPLFRFYKGRRRLRLRLHDVYSVLFPCRCIGSSGAGNEEDGDHGEAFPAIEGRFPDSLDWSDDDDSIDRRAELFIQKFYADMKMERLASI
Homology
BLAST of CcUC05G104800 vs. NCBI nr
Match: XP_038893176.1 (uncharacterized protein LOC120082033 [Benincasa hispida])

HSP 1 Score: 221.9 bits (564), Expect = 3.9e-54
Identity = 117/154 (75.97%), Postives = 128/154 (83.12%), Query Frame = 0

Query: 1   MQSKSPPILQKLSNFLKLSIFIAKMKRPIIPNLLFFRKSFRSNNFELLQHYNYRFLPDFQ 60
           MQSK PPI QKLS+FLK+SIFIAKMKRPIIP LLF +KS R N+FEL  HYNY F+ DFQ
Sbjct: 1   MQSKRPPIFQKLSDFLKVSIFIAKMKRPIIPKLLFLKKSSRRNSFELHHHYNYGFVRDFQ 60

Query: 61  FSPSTTPLFRFYKGRRRLRLRLHDVYSVLFPCRCIG-SSGAGNEEDGDHGEAFPAIEGRF 120
           FSPSTTPLFRFY+GRR L  R  DVYSVLFPCRCIG SSGA  EEDGD+     ++E   
Sbjct: 61  FSPSTTPLFRFYRGRRGLCRR--DVYSVLFPCRCIGSSSGAEKEEDGDY-----SVEEAL 120

Query: 121 PDSLDWSDDDDSIDRRAELFIQKFYADMKMERLA 154
           P+SLDWSDDDDSIDRRAE+FIQKFYADMKMERLA
Sbjct: 121 PESLDWSDDDDSIDRRAEIFIQKFYADMKMERLA 147

BLAST of CcUC05G104800 vs. NCBI nr
Match: XP_004135396.1 (uncharacterized protein LOC101211232 [Cucumis sativus])

HSP 1 Score: 209.5 bits (532), Expect = 2.0e-50
Identity = 110/157 (70.06%), Postives = 122/157 (77.71%), Query Frame = 0

Query: 1   MQSKSPPILQKLSNFLKLSIFIAKMKRPIIPNLLFFRKSFRSNNFELLQHYNYRFLPDFQ 60
           MQSK PPI QKLSNFL++SIF+AKMKRPIIP LLF +KS R  +FELL HYNY F+ DF+
Sbjct: 1   MQSKRPPIFQKLSNFLRVSIFMAKMKRPIIPKLLFLKKSSRMKSFELLHHYNYGFVRDFE 60

Query: 61  FSPSTTPLFRFYKGRRRLRLRLHDVYSVLFPCRCI--GSSGAGNEEDGDHGEAFPAIEGR 120
           FSPSTTPLFRF     R  LR +DV SVLFPCRCI  GS G   E DGD+G     +E  
Sbjct: 61  FSPSTTPLFRFNNRGGRRGLRRYDVCSVLFPCRCIVGGSGGEKKEGDGDYG-----VEEA 120

Query: 121 FPDSLDWSDDDDSIDRRAELFIQKFYADMKMERLASI 156
           FP+SLDWSDDDDSIDRRAE+FIQKFY DMKMERL SI
Sbjct: 121 FPESLDWSDDDDSIDRRAEIFIQKFYEDMKMERLTSI 152

BLAST of CcUC05G104800 vs. NCBI nr
Match: KAA0034569.1 (uncharacterized protein E6C27_scaffold65G005850 [Cucumis melo var. makuwa] >TYK09121.1 uncharacterized protein E5676_scaffold475G001120 [Cucumis melo var. makuwa])

HSP 1 Score: 203.4 bits (516), Expect = 1.4e-48
Identity = 112/159 (70.44%), Postives = 124/159 (77.99%), Query Frame = 0

Query: 1   MQSKSPPILQKLSNFLKLSIFIAKMKRPIIPNLLFFRKSFRSNNFELLQHYNY-RFLPDF 60
           MQSK PPI QKLS+FLK+SIFIAKMKRP+IP LLF +KS  + NFELLQHYNY  F+ DF
Sbjct: 1   MQSKRPPIFQKLSSFLKVSIFIAKMKRPLIPKLLFLKKSSGTKNFELLQHYNYGSFVRDF 60

Query: 61  QFSPSTTPLFRFYKGRRRLRLRLHDVYSVLFPCRCI--GSSGAGNEEDGDHGEAFPAIEG 120
           QFSPSTTPLFRF     R  LR +DV SVLFPCRCI   S G   E+DGD+      +E 
Sbjct: 61  QFSPSTTPLFRFNNRGSRRGLRRYDVCSVLFPCRCIIGASGGEKKEKDGDYD-----VEE 120

Query: 121 RFPDSLDWSD-DDDSIDRRAELFIQKFYADMKMERLASI 156
            FP+SLDWSD DDDSIDRRAE+FIQKFYADMKMERLASI
Sbjct: 121 AFPESLDWSDNDDDSIDRRAEIFIQKFYADMKMERLASI 154

BLAST of CcUC05G104800 vs. NCBI nr
Match: KAE8648793.1 (hypothetical protein Csa_009258 [Cucumis sativus])

HSP 1 Score: 182.6 bits (462), Expect = 2.6e-42
Identity = 96/140 (68.57%), Postives = 107/140 (76.43%), Query Frame = 0

Query: 18  LSIFIAKMKRPIIPNLLFFRKSFRSNNFELLQHYNYRFLPDFQFSPSTTPLFRFYKGRRR 77
           +SIF+AKMKRPIIP LLF +KS R  +FELL HYNY F+ DF+FSPSTTPLFRF     R
Sbjct: 16  VSIFMAKMKRPIIPKLLFLKKSSRMKSFELLHHYNYGFVRDFEFSPSTTPLFRFNNRGGR 75

Query: 78  LRLRLHDVYSVLFPCRCI--GSSGAGNEEDGDHGEAFPAIEGRFPDSLDWSDDDDSIDRR 137
             LR +DV SVLFPCRCI  GS G   E DGD+G     +E  FP+SLDWSDDDDSIDRR
Sbjct: 76  RGLRRYDVCSVLFPCRCIVGGSGGEKKEGDGDYG-----VEEAFPESLDWSDDDDSIDRR 135

Query: 138 AELFIQKFYADMKMERLASI 156
           AE+FIQKFY DMKMERL SI
Sbjct: 136 AEIFIQKFYEDMKMERLTSI 150

BLAST of CcUC05G104800 vs. NCBI nr
Match: XP_023542510.1 (uncharacterized protein LOC111802395 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 179.1 bits (453), Expect = 2.9e-41
Identity = 103/158 (65.19%), Postives = 118/158 (74.68%), Query Frame = 0

Query: 1   MQSKSPPILQKLSNFLKLSIFIAKMKRPIIPNLLFFRKSFRSNNFELLQHYNYRFLPDFQ 60
           MQ K  PI +KL NFLK+SIF+AKMK+PI P LLF +KS  +  FELLQ         FQ
Sbjct: 1   MQPKRQPISKKLLNFLKVSIFLAKMKKPIFPKLLFLKKSSPAEKFELLQ---------FQ 60

Query: 61  FSPSTTPLFRFYKGRRRLRLRLHDVYSVLFPCRCIGSSGAGNEEDGDHGEAFPAIEGRFP 120
           FSPSTTPLFR Y+GRRR RLR   VYSVLFPCRCI S   G E DG+ G  FPAIEGR  
Sbjct: 61  FSPSTTPLFRCYRGRRR-RLRRGGVYSVLFPCRCIDS--FGGENDGEVG--FPAIEGRGS 120

Query: 121 DSLDW---SDDDDSIDRRAELFIQKFYADMKMERLASI 156
           ++LDW   SD+++SIDRRAELFIQKFYADM+MERLA+I
Sbjct: 121 EALDWSELSDEEESIDRRAELFIQKFYADMEMERLAAI 144

BLAST of CcUC05G104800 vs. ExPASy TrEMBL
Match: A0A5A7SZQ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001120 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 7.0e-49
Identity = 112/159 (70.44%), Postives = 124/159 (77.99%), Query Frame = 0

Query: 1   MQSKSPPILQKLSNFLKLSIFIAKMKRPIIPNLLFFRKSFRSNNFELLQHYNY-RFLPDF 60
           MQSK PPI QKLS+FLK+SIFIAKMKRP+IP LLF +KS  + NFELLQHYNY  F+ DF
Sbjct: 1   MQSKRPPIFQKLSSFLKVSIFIAKMKRPLIPKLLFLKKSSGTKNFELLQHYNYGSFVRDF 60

Query: 61  QFSPSTTPLFRFYKGRRRLRLRLHDVYSVLFPCRCI--GSSGAGNEEDGDHGEAFPAIEG 120
           QFSPSTTPLFRF     R  LR +DV SVLFPCRCI   S G   E+DGD+      +E 
Sbjct: 61  QFSPSTTPLFRFNNRGSRRGLRRYDVCSVLFPCRCIIGASGGEKKEKDGDYD-----VEE 120

Query: 121 RFPDSLDWSD-DDDSIDRRAELFIQKFYADMKMERLASI 156
            FP+SLDWSD DDDSIDRRAE+FIQKFYADMKMERLASI
Sbjct: 121 AFPESLDWSDNDDDSIDRRAEIFIQKFYADMKMERLASI 154

BLAST of CcUC05G104800 vs. ExPASy TrEMBL
Match: A0A6J1HX57 (uncharacterized protein LOC111467464 OS=Cucurbita maxima OX=3661 GN=LOC111467464 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.2e-40
Identity = 102/158 (64.56%), Postives = 117/158 (74.05%), Query Frame = 0

Query: 1   MQSKSPPILQKLSNFLKLSIFIAKMKRPIIPNLLFFRKSFRSNNFELLQHYNYRFLPDFQ 60
           MQ K  PI QKL NFLK SIF+AKMK+PI P LLF +KS  +  FELLQ         FQ
Sbjct: 1   MQPKRQPISQKLLNFLKASIFLAKMKKPIFPKLLFLKKSSPAKKFELLQ---------FQ 60

Query: 61  FSPSTTPLFRFYKGRRRLRLRLHDVYSVLFPCRCIGSSGAGNEEDGDHGEAFPAIEGRFP 120
           FSPSTTPLFR Y+GRRR RLR   VYSVLFPCRCIG+   G E +G+ G  FPAIEGR  
Sbjct: 61  FSPSTTPLFRCYRGRRR-RLRRGGVYSVLFPCRCIGN--FGGEIEGEEG--FPAIEGRVS 120

Query: 121 DSLD---WSDDDDSIDRRAELFIQKFYADMKMERLASI 156
           ++LD    SD++DSIDRRAELFI+KFYADM+MERLA+I
Sbjct: 121 EALDCSELSDEEDSIDRRAELFIEKFYADMEMERLAAI 144

BLAST of CcUC05G104800 vs. ExPASy TrEMBL
Match: A0A6J1G0E9 (uncharacterized protein LOC111449533 OS=Cucurbita moschata OX=3662 GN=LOC111449533 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 4.6e-40
Identity = 104/158 (65.82%), Postives = 117/158 (74.05%), Query Frame = 0

Query: 1   MQSKSPPILQKLSNFLKLSIFIAKMKRPIIPNLLFFRKSFRSNNFELLQHYNYRFLPDFQ 60
           MQ K  PI QKL NFLK+SIF+AKMK+PI P LLF +KS  +  FELLQ         FQ
Sbjct: 1   MQPKRQPISQKLFNFLKVSIFLAKMKKPIFPKLLFLKKSSPAEKFELLQ---------FQ 60

Query: 61  FSPSTTPLFRFYKGRRRLRLRLHDVYSVLFPCRCIGSSGAGNEEDGDHGEAFPAIEGRFP 120
           FSPSTTPLFR Y+GRRR RLR   VYSVLFP RCIGS   G E DG+ G  FPAIEGR  
Sbjct: 61  FSPSTTPLFRCYRGRRR-RLRRGGVYSVLFP-RCIGS--FGGENDGEVG--FPAIEGRGS 120

Query: 121 DSLDW---SDDDDSIDRRAELFIQKFYADMKMERLASI 156
           ++ DW   SD++DSIDRRAELFIQKFYADM+MERLA+I
Sbjct: 121 EAWDWSELSDEEDSIDRRAELFIQKFYADMEMERLAAI 143

BLAST of CcUC05G104800 vs. ExPASy TrEMBL
Match: A0A5N6RE49 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_015866 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 7.8e-32
Identity = 76/159 (47.80%), Postives = 109/159 (68.55%), Query Frame = 0

Query: 1   MQSKSPPILQKLSNFLKLSIFIAKMKRPIIPNLLFFRKSFRSNNFELLQHYNYRFLPDFQ 60
           M  K  P LQKLSN LK+SI +AKM++P+IP L+F +K+ R   F+LL+HYNY FL ++Q
Sbjct: 1   MPRKRLPFLQKLSNLLKVSILVAKMRKPVIPKLIFLKKARRLKKFKLLKHYNYGFLEEYQ 60

Query: 61  FSPSTTPLFRFYKGRRRLRLRLHDVYSVLFPCRCIGSSGAGNEEDGDHG----EAFPAIE 120
           FS S+TPL  ++K   + R RL D+YS+ F C C+GS  A  + D D+      A PAI 
Sbjct: 61  FSASSTPLIHYHKNHFKSR-RLRDIYSMFFLCACLGSLRA-EKGDADYRLESLPALPAIA 120

Query: 121 GRFPDSLDWSDDDDSIDRRAELFIQKFYADMKMERLASI 156
           G+F +  D  D++DS+D+RAE FI++FY +M+M+R  S+
Sbjct: 121 GQFLEPFDSGDEEDSVDQRAERFIRRFYEEMRMQRQESL 157

BLAST of CcUC05G104800 vs. ExPASy TrEMBL
Match: A0A6A1UZN0 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR7G023686 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 9.5e-30
Identity = 76/158 (48.10%), Postives = 103/158 (65.19%), Query Frame = 0

Query: 1   MQSKSPPILQKLSNFLKLSIFIAKMKRPIIPNLLFFRKSFRSNNFELLQHYNYRFLPDFQ 60
           M  K  PILQK SN  K  IF+A++++PIIP L+F RKS R    +LL+HYN+ FL ++Q
Sbjct: 1   MPRKRLPILQKASNLFKFPIFVARIRKPIIPKLMFLRKSRRVKKCKLLKHYNFGFLDEYQ 60

Query: 61  FSPSTTPLFRFYKGRRRLRLRLHDVYSVLFPCRCI-GSSGAGNEEDGDHG--EAFPAIEG 120
           FSPS+TPL  + +   + R  L D+YS+   CRC+ GSS  G + D   G   AFPA   
Sbjct: 61  FSPSSTPLIHYRRKNIKSR-NLRDIYSMFLLCRCLRGSSAGGGDSDYTLGALPAFPATAE 120

Query: 121 RFPDSLDWSDDDDSIDRRAELFIQKFYADMKMERLASI 156
           +F + L   D++DS+D+RAE FIQ+FY  MKM+R  SI
Sbjct: 121 QFMEPLGSGDEEDSVDQRAERFIQRFYEQMKMQRQESI 157

BLAST of CcUC05G104800 vs. TAIR 10
Match: AT1G68350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; Has 20 Blast hits to 20 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 90.9 bits (224), Expect = 9.8e-19
Identity = 65/163 (39.88%), Postives = 91/163 (55.83%), Query Frame = 0

Query: 1   MQSKSPPILQKLSNFLKLSIFIAKMKRPIIPNL-LFFRKSFRSNNFELLQHYNYRFLPDF 60
           M  +  PI Q++S  LK+SI    ++RPIIP L L   K  RS   +LLQ +NY+FL ++
Sbjct: 1   MSQRRRPIFQRVSKLLKISI----LRRPIIPRLKLIPIKQRRSKRVKLLQQHNYKFLQEY 60

Query: 61  QFSPSTTPLFRFY-KGRRRLRLRLHDVYSVLFPCRCIGSSGAGN--------EEDGDH-- 120
           QFSPS+T   + Y K  +  R  L  +Y +LF  +CIG     +        E +  H  
Sbjct: 61  QFSPSSTSFIKCYGKSIQISRSGLKRIYGLLFLSQCIGRYNENDDTITQSWMEMEPFHYA 120

Query: 121 -GEAFPAIEGRFPDSLDWSDDDDSIDRRAELFIQKFYADMKME 151
            G A PA E   P   D+  +DDSID +AE FI+KFY +M+M+
Sbjct: 121 LGVASPAREHLQP--FDYFSEDDSIDLKAERFIEKFYDEMRMQ 157

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038893176.13.9e-5475.97uncharacterized protein LOC120082033 [Benincasa hispida][more]
XP_004135396.12.0e-5070.06uncharacterized protein LOC101211232 [Cucumis sativus][more]
KAA0034569.11.4e-4870.44uncharacterized protein E6C27_scaffold65G005850 [Cucumis melo var. makuwa] >TYK0... [more]
KAE8648793.12.6e-4268.57hypothetical protein Csa_009258 [Cucumis sativus][more]
XP_023542510.12.9e-4165.19uncharacterized protein LOC111802395 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SZQ97.0e-4970.44Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1HX571.2e-4064.56uncharacterized protein LOC111467464 OS=Cucurbita maxima OX=3661 GN=LOC111467464... [more]
A0A6J1G0E94.6e-4065.82uncharacterized protein LOC111449533 OS=Cucurbita moschata OX=3662 GN=LOC1114495... [more]
A0A5N6RE497.8e-3247.80Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_015866 PE=4 SV=1[more]
A0A6A1UZN09.5e-3048.10Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR7G023686 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G68350.19.8e-1939.88unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 129..155
e-value: 3.5E-10
score: 39.3
NoneNo IPR availablePANTHERPTHR33265AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATEDcoord: 1..154
NoneNo IPR availablePANTHERPTHR33265:SF10OS01G0133200 PROTEINcoord: 1..154

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC05G104800.1CcUC05G104800.1mRNA