Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGTCTAAAAGCCCACCCATCCTCCAAAAGCTTTCAAATTTCCTCAAACTTTCCATCTTTATCGCCAAAATGAAAAGACCCATCATTCCAAACCTCCTTTTCTTCAGGAAATCATTCAGGTCAAACAACTTCGAGCTCCTTCAGCACTATAATTATAGGTTTCTTCCAGACTTCCAATTCTCCCCTTCCACCACTCCTCTGTTTCGTTTTTACAAAGGCCGCCGCCGCCTCCGCCTCCGCCTCCACGATGTCTATTCGGTGCTGTTTCCTTGCAGATGTATTGGTAGTTCTGGAGCTGGAAACGAAGAAGATGGAGATCACGGCGAAGCTTTTCCGGCCATTGAAGGGCGGTTTCCGGACTCGTTGGATTGGAGCGATGACGATGATTCAATTGATCGGAGGGCTGAACTTTTCATTCAGAAATTCTACGCGGATATGAAAATGGAGAGGCTAGCATCGATTTGA
mRNA sequence
ATGCAGTCTAAAAGCCCACCCATCCTCCAAAAGCTTTCAAATTTCCTCAAACTTTCCATCTTTATCGCCAAAATGAAAAGACCCATCATTCCAAACCTCCTTTTCTTCAGGAAATCATTCAGGTCAAACAACTTCGAGCTCCTTCAGCACTATAATTATAGGTTTCTTCCAGACTTCCAATTCTCCCCTTCCACCACTCCTCTGTTTCGTTTTTACAAAGGCCGCCGCCGCCTCCGCCTCCGCCTCCACGATGTCTATTCGGTGCTGTTTCCTTGCAGATGTATTGGTAGTTCTGGAGCTGGAAACGAAGAAGATGGAGATCACGGCGAAGCTTTTCCGGCCATTGAAGGGCGGTTTCCGGACTCGTTGGATTGGAGCGATGACGATGATTCAATTGATCGGAGGGCTGAACTTTTCATTCAGAAATTCTACGCGGATATGAAAATGGAGAGGCTAGCATCGATTTGA
Coding sequence (CDS)
ATGCAGTCTAAAAGCCCACCCATCCTCCAAAAGCTTTCAAATTTCCTCAAACTTTCCATCTTTATCGCCAAAATGAAAAGACCCATCATTCCAAACCTCCTTTTCTTCAGGAAATCATTCAGGTCAAACAACTTCGAGCTCCTTCAGCACTATAATTATAGGTTTCTTCCAGACTTCCAATTCTCCCCTTCCACCACTCCTCTGTTTCGTTTTTACAAAGGCCGCCGCCGCCTCCGCCTCCGCCTCCACGATGTCTATTCGGTGCTGTTTCCTTGCAGATGTATTGGTAGTTCTGGAGCTGGAAACGAAGAAGATGGAGATCACGGCGAAGCTTTTCCGGCCATTGAAGGGCGGTTTCCGGACTCGTTGGATTGGAGCGATGACGATGATTCAATTGATCGGAGGGCTGAACTTTTCATTCAGAAATTCTACGCGGATATGAAAATGGAGAGGCTAGCATCGATTTGA
Protein sequence
MQSKSPPILQKLSNFLKLSIFIAKMKRPIIPNLLFFRKSFRSNNFELLQHYNYRFLPDFQFSPSTTPLFRFYKGRRRLRLRLHDVYSVLFPCRCIGSSGAGNEEDGDHGEAFPAIEGRFPDSLDWSDDDDSIDRRAELFIQKFYADMKMERLASI
Homology
BLAST of CcUC05G104800 vs. NCBI nr
Match:
XP_038893176.1 (uncharacterized protein LOC120082033 [Benincasa hispida])
HSP 1 Score: 221.9 bits (564), Expect = 3.9e-54
Identity = 117/154 (75.97%), Postives = 128/154 (83.12%), Query Frame = 0
Query: 1 MQSKSPPILQKLSNFLKLSIFIAKMKRPIIPNLLFFRKSFRSNNFELLQHYNYRFLPDFQ 60
MQSK PPI QKLS+FLK+SIFIAKMKRPIIP LLF +KS R N+FEL HYNY F+ DFQ
Sbjct: 1 MQSKRPPIFQKLSDFLKVSIFIAKMKRPIIPKLLFLKKSSRRNSFELHHHYNYGFVRDFQ 60
Query: 61 FSPSTTPLFRFYKGRRRLRLRLHDVYSVLFPCRCIG-SSGAGNEEDGDHGEAFPAIEGRF 120
FSPSTTPLFRFY+GRR L R DVYSVLFPCRCIG SSGA EEDGD+ ++E
Sbjct: 61 FSPSTTPLFRFYRGRRGLCRR--DVYSVLFPCRCIGSSSGAEKEEDGDY-----SVEEAL 120
Query: 121 PDSLDWSDDDDSIDRRAELFIQKFYADMKMERLA 154
P+SLDWSDDDDSIDRRAE+FIQKFYADMKMERLA
Sbjct: 121 PESLDWSDDDDSIDRRAEIFIQKFYADMKMERLA 147
BLAST of CcUC05G104800 vs. NCBI nr
Match:
XP_004135396.1 (uncharacterized protein LOC101211232 [Cucumis sativus])
HSP 1 Score: 209.5 bits (532), Expect = 2.0e-50
Identity = 110/157 (70.06%), Postives = 122/157 (77.71%), Query Frame = 0
Query: 1 MQSKSPPILQKLSNFLKLSIFIAKMKRPIIPNLLFFRKSFRSNNFELLQHYNYRFLPDFQ 60
MQSK PPI QKLSNFL++SIF+AKMKRPIIP LLF +KS R +FELL HYNY F+ DF+
Sbjct: 1 MQSKRPPIFQKLSNFLRVSIFMAKMKRPIIPKLLFLKKSSRMKSFELLHHYNYGFVRDFE 60
Query: 61 FSPSTTPLFRFYKGRRRLRLRLHDVYSVLFPCRCI--GSSGAGNEEDGDHGEAFPAIEGR 120
FSPSTTPLFRF R LR +DV SVLFPCRCI GS G E DGD+G +E
Sbjct: 61 FSPSTTPLFRFNNRGGRRGLRRYDVCSVLFPCRCIVGGSGGEKKEGDGDYG-----VEEA 120
Query: 121 FPDSLDWSDDDDSIDRRAELFIQKFYADMKMERLASI 156
FP+SLDWSDDDDSIDRRAE+FIQKFY DMKMERL SI
Sbjct: 121 FPESLDWSDDDDSIDRRAEIFIQKFYEDMKMERLTSI 152
BLAST of CcUC05G104800 vs. NCBI nr
Match:
KAA0034569.1 (uncharacterized protein E6C27_scaffold65G005850 [Cucumis melo var. makuwa] >TYK09121.1 uncharacterized protein E5676_scaffold475G001120 [Cucumis melo var. makuwa])
HSP 1 Score: 203.4 bits (516), Expect = 1.4e-48
Identity = 112/159 (70.44%), Postives = 124/159 (77.99%), Query Frame = 0
Query: 1 MQSKSPPILQKLSNFLKLSIFIAKMKRPIIPNLLFFRKSFRSNNFELLQHYNY-RFLPDF 60
MQSK PPI QKLS+FLK+SIFIAKMKRP+IP LLF +KS + NFELLQHYNY F+ DF
Sbjct: 1 MQSKRPPIFQKLSSFLKVSIFIAKMKRPLIPKLLFLKKSSGTKNFELLQHYNYGSFVRDF 60
Query: 61 QFSPSTTPLFRFYKGRRRLRLRLHDVYSVLFPCRCI--GSSGAGNEEDGDHGEAFPAIEG 120
QFSPSTTPLFRF R LR +DV SVLFPCRCI S G E+DGD+ +E
Sbjct: 61 QFSPSTTPLFRFNNRGSRRGLRRYDVCSVLFPCRCIIGASGGEKKEKDGDYD-----VEE 120
Query: 121 RFPDSLDWSD-DDDSIDRRAELFIQKFYADMKMERLASI 156
FP+SLDWSD DDDSIDRRAE+FIQKFYADMKMERLASI
Sbjct: 121 AFPESLDWSDNDDDSIDRRAEIFIQKFYADMKMERLASI 154
BLAST of CcUC05G104800 vs. NCBI nr
Match:
KAE8648793.1 (hypothetical protein Csa_009258 [Cucumis sativus])
HSP 1 Score: 182.6 bits (462), Expect = 2.6e-42
Identity = 96/140 (68.57%), Postives = 107/140 (76.43%), Query Frame = 0
Query: 18 LSIFIAKMKRPIIPNLLFFRKSFRSNNFELLQHYNYRFLPDFQFSPSTTPLFRFYKGRRR 77
+SIF+AKMKRPIIP LLF +KS R +FELL HYNY F+ DF+FSPSTTPLFRF R
Sbjct: 16 VSIFMAKMKRPIIPKLLFLKKSSRMKSFELLHHYNYGFVRDFEFSPSTTPLFRFNNRGGR 75
Query: 78 LRLRLHDVYSVLFPCRCI--GSSGAGNEEDGDHGEAFPAIEGRFPDSLDWSDDDDSIDRR 137
LR +DV SVLFPCRCI GS G E DGD+G +E FP+SLDWSDDDDSIDRR
Sbjct: 76 RGLRRYDVCSVLFPCRCIVGGSGGEKKEGDGDYG-----VEEAFPESLDWSDDDDSIDRR 135
Query: 138 AELFIQKFYADMKMERLASI 156
AE+FIQKFY DMKMERL SI
Sbjct: 136 AEIFIQKFYEDMKMERLTSI 150
BLAST of CcUC05G104800 vs. NCBI nr
Match:
XP_023542510.1 (uncharacterized protein LOC111802395 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 179.1 bits (453), Expect = 2.9e-41
Identity = 103/158 (65.19%), Postives = 118/158 (74.68%), Query Frame = 0
Query: 1 MQSKSPPILQKLSNFLKLSIFIAKMKRPIIPNLLFFRKSFRSNNFELLQHYNYRFLPDFQ 60
MQ K PI +KL NFLK+SIF+AKMK+PI P LLF +KS + FELLQ FQ
Sbjct: 1 MQPKRQPISKKLLNFLKVSIFLAKMKKPIFPKLLFLKKSSPAEKFELLQ---------FQ 60
Query: 61 FSPSTTPLFRFYKGRRRLRLRLHDVYSVLFPCRCIGSSGAGNEEDGDHGEAFPAIEGRFP 120
FSPSTTPLFR Y+GRRR RLR VYSVLFPCRCI S G E DG+ G FPAIEGR
Sbjct: 61 FSPSTTPLFRCYRGRRR-RLRRGGVYSVLFPCRCIDS--FGGENDGEVG--FPAIEGRGS 120
Query: 121 DSLDW---SDDDDSIDRRAELFIQKFYADMKMERLASI 156
++LDW SD+++SIDRRAELFIQKFYADM+MERLA+I
Sbjct: 121 EALDWSELSDEEESIDRRAELFIQKFYADMEMERLAAI 144
BLAST of CcUC05G104800 vs. ExPASy TrEMBL
Match:
A0A5A7SZQ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001120 PE=4 SV=1)
HSP 1 Score: 203.4 bits (516), Expect = 7.0e-49
Identity = 112/159 (70.44%), Postives = 124/159 (77.99%), Query Frame = 0
Query: 1 MQSKSPPILQKLSNFLKLSIFIAKMKRPIIPNLLFFRKSFRSNNFELLQHYNY-RFLPDF 60
MQSK PPI QKLS+FLK+SIFIAKMKRP+IP LLF +KS + NFELLQHYNY F+ DF
Sbjct: 1 MQSKRPPIFQKLSSFLKVSIFIAKMKRPLIPKLLFLKKSSGTKNFELLQHYNYGSFVRDF 60
Query: 61 QFSPSTTPLFRFYKGRRRLRLRLHDVYSVLFPCRCI--GSSGAGNEEDGDHGEAFPAIEG 120
QFSPSTTPLFRF R LR +DV SVLFPCRCI S G E+DGD+ +E
Sbjct: 61 QFSPSTTPLFRFNNRGSRRGLRRYDVCSVLFPCRCIIGASGGEKKEKDGDYD-----VEE 120
Query: 121 RFPDSLDWSD-DDDSIDRRAELFIQKFYADMKMERLASI 156
FP+SLDWSD DDDSIDRRAE+FIQKFYADMKMERLASI
Sbjct: 121 AFPESLDWSDNDDDSIDRRAEIFIQKFYADMKMERLASI 154
BLAST of CcUC05G104800 vs. ExPASy TrEMBL
Match:
A0A6J1HX57 (uncharacterized protein LOC111467464 OS=Cucurbita maxima OX=3661 GN=LOC111467464 PE=4 SV=1)
HSP 1 Score: 176.0 bits (445), Expect = 1.2e-40
Identity = 102/158 (64.56%), Postives = 117/158 (74.05%), Query Frame = 0
Query: 1 MQSKSPPILQKLSNFLKLSIFIAKMKRPIIPNLLFFRKSFRSNNFELLQHYNYRFLPDFQ 60
MQ K PI QKL NFLK SIF+AKMK+PI P LLF +KS + FELLQ FQ
Sbjct: 1 MQPKRQPISQKLLNFLKASIFLAKMKKPIFPKLLFLKKSSPAKKFELLQ---------FQ 60
Query: 61 FSPSTTPLFRFYKGRRRLRLRLHDVYSVLFPCRCIGSSGAGNEEDGDHGEAFPAIEGRFP 120
FSPSTTPLFR Y+GRRR RLR VYSVLFPCRCIG+ G E +G+ G FPAIEGR
Sbjct: 61 FSPSTTPLFRCYRGRRR-RLRRGGVYSVLFPCRCIGN--FGGEIEGEEG--FPAIEGRVS 120
Query: 121 DSLD---WSDDDDSIDRRAELFIQKFYADMKMERLASI 156
++LD SD++DSIDRRAELFI+KFYADM+MERLA+I
Sbjct: 121 EALDCSELSDEEDSIDRRAELFIEKFYADMEMERLAAI 144
BLAST of CcUC05G104800 vs. ExPASy TrEMBL
Match:
A0A6J1G0E9 (uncharacterized protein LOC111449533 OS=Cucurbita moschata OX=3662 GN=LOC111449533 PE=4 SV=1)
HSP 1 Score: 174.1 bits (440), Expect = 4.6e-40
Identity = 104/158 (65.82%), Postives = 117/158 (74.05%), Query Frame = 0
Query: 1 MQSKSPPILQKLSNFLKLSIFIAKMKRPIIPNLLFFRKSFRSNNFELLQHYNYRFLPDFQ 60
MQ K PI QKL NFLK+SIF+AKMK+PI P LLF +KS + FELLQ FQ
Sbjct: 1 MQPKRQPISQKLFNFLKVSIFLAKMKKPIFPKLLFLKKSSPAEKFELLQ---------FQ 60
Query: 61 FSPSTTPLFRFYKGRRRLRLRLHDVYSVLFPCRCIGSSGAGNEEDGDHGEAFPAIEGRFP 120
FSPSTTPLFR Y+GRRR RLR VYSVLFP RCIGS G E DG+ G FPAIEGR
Sbjct: 61 FSPSTTPLFRCYRGRRR-RLRRGGVYSVLFP-RCIGS--FGGENDGEVG--FPAIEGRGS 120
Query: 121 DSLDW---SDDDDSIDRRAELFIQKFYADMKMERLASI 156
++ DW SD++DSIDRRAELFIQKFYADM+MERLA+I
Sbjct: 121 EAWDWSELSDEEDSIDRRAELFIQKFYADMEMERLAAI 143
BLAST of CcUC05G104800 vs. ExPASy TrEMBL
Match:
A0A5N6RE49 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_015866 PE=4 SV=1)
HSP 1 Score: 146.7 bits (369), Expect = 7.8e-32
Identity = 76/159 (47.80%), Postives = 109/159 (68.55%), Query Frame = 0
Query: 1 MQSKSPPILQKLSNFLKLSIFIAKMKRPIIPNLLFFRKSFRSNNFELLQHYNYRFLPDFQ 60
M K P LQKLSN LK+SI +AKM++P+IP L+F +K+ R F+LL+HYNY FL ++Q
Sbjct: 1 MPRKRLPFLQKLSNLLKVSILVAKMRKPVIPKLIFLKKARRLKKFKLLKHYNYGFLEEYQ 60
Query: 61 FSPSTTPLFRFYKGRRRLRLRLHDVYSVLFPCRCIGSSGAGNEEDGDHG----EAFPAIE 120
FS S+TPL ++K + R RL D+YS+ F C C+GS A + D D+ A PAI
Sbjct: 61 FSASSTPLIHYHKNHFKSR-RLRDIYSMFFLCACLGSLRA-EKGDADYRLESLPALPAIA 120
Query: 121 GRFPDSLDWSDDDDSIDRRAELFIQKFYADMKMERLASI 156
G+F + D D++DS+D+RAE FI++FY +M+M+R S+
Sbjct: 121 GQFLEPFDSGDEEDSVDQRAERFIRRFYEEMRMQRQESL 157
BLAST of CcUC05G104800 vs. ExPASy TrEMBL
Match:
A0A6A1UZN0 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR7G023686 PE=4 SV=1)
HSP 1 Score: 139.8 bits (351), Expect = 9.5e-30
Identity = 76/158 (48.10%), Postives = 103/158 (65.19%), Query Frame = 0
Query: 1 MQSKSPPILQKLSNFLKLSIFIAKMKRPIIPNLLFFRKSFRSNNFELLQHYNYRFLPDFQ 60
M K PILQK SN K IF+A++++PIIP L+F RKS R +LL+HYN+ FL ++Q
Sbjct: 1 MPRKRLPILQKASNLFKFPIFVARIRKPIIPKLMFLRKSRRVKKCKLLKHYNFGFLDEYQ 60
Query: 61 FSPSTTPLFRFYKGRRRLRLRLHDVYSVLFPCRCI-GSSGAGNEEDGDHG--EAFPAIEG 120
FSPS+TPL + + + R L D+YS+ CRC+ GSS G + D G AFPA
Sbjct: 61 FSPSSTPLIHYRRKNIKSR-NLRDIYSMFLLCRCLRGSSAGGGDSDYTLGALPAFPATAE 120
Query: 121 RFPDSLDWSDDDDSIDRRAELFIQKFYADMKMERLASI 156
+F + L D++DS+D+RAE FIQ+FY MKM+R SI
Sbjct: 121 QFMEPLGSGDEEDSVDQRAERFIQRFYEQMKMQRQESI 157
BLAST of CcUC05G104800 vs. TAIR 10
Match:
AT1G68350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; Has 20 Blast hits to 20 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 90.9 bits (224), Expect = 9.8e-19
Identity = 65/163 (39.88%), Postives = 91/163 (55.83%), Query Frame = 0
Query: 1 MQSKSPPILQKLSNFLKLSIFIAKMKRPIIPNL-LFFRKSFRSNNFELLQHYNYRFLPDF 60
M + PI Q++S LK+SI ++RPIIP L L K RS +LLQ +NY+FL ++
Sbjct: 1 MSQRRRPIFQRVSKLLKISI----LRRPIIPRLKLIPIKQRRSKRVKLLQQHNYKFLQEY 60
Query: 61 QFSPSTTPLFRFY-KGRRRLRLRLHDVYSVLFPCRCIGSSGAGN--------EEDGDH-- 120
QFSPS+T + Y K + R L +Y +LF +CIG + E + H
Sbjct: 61 QFSPSSTSFIKCYGKSIQISRSGLKRIYGLLFLSQCIGRYNENDDTITQSWMEMEPFHYA 120
Query: 121 -GEAFPAIEGRFPDSLDWSDDDDSIDRRAELFIQKFYADMKME 151
G A PA E P D+ +DDSID +AE FI+KFY +M+M+
Sbjct: 121 LGVASPAREHLQP--FDYFSEDDSIDLKAERFIEKFYDEMRMQ 157
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038893176.1 | 3.9e-54 | 75.97 | uncharacterized protein LOC120082033 [Benincasa hispida] | [more] |
XP_004135396.1 | 2.0e-50 | 70.06 | uncharacterized protein LOC101211232 [Cucumis sativus] | [more] |
KAA0034569.1 | 1.4e-48 | 70.44 | uncharacterized protein E6C27_scaffold65G005850 [Cucumis melo var. makuwa] >TYK0... | [more] |
KAE8648793.1 | 2.6e-42 | 68.57 | hypothetical protein Csa_009258 [Cucumis sativus] | [more] |
XP_023542510.1 | 2.9e-41 | 65.19 | uncharacterized protein LOC111802395 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SZQ9 | 7.0e-49 | 70.44 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1HX57 | 1.2e-40 | 64.56 | uncharacterized protein LOC111467464 OS=Cucurbita maxima OX=3661 GN=LOC111467464... | [more] |
A0A6J1G0E9 | 4.6e-40 | 65.82 | uncharacterized protein LOC111449533 OS=Cucurbita moschata OX=3662 GN=LOC1114495... | [more] |
A0A5N6RE49 | 7.8e-32 | 47.80 | Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_015866 PE=4 SV=1 | [more] |
A0A6A1UZN0 | 9.5e-30 | 48.10 | Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR7G023686 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT1G68350.1 | 9.8e-19 | 39.88 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |