CcUC05G103470 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC05G103470
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionGlycine-rich RNA-binding family protein
LocationCicolChr05: 31187955 .. 31193741 (+)
RNA-Seq ExpressionCcUC05G103470
SyntenyCcUC05G103470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATTGCCTGTCAAACAAAAACTTCAAAATGGGTCATCATTACAAATATAACGCTCTATATATAATTTTGGAGAAGTTTTATTTATTTATTTATTTACAATAATTTTGGAGGAGGGTTTTAATTTAAAAATGAAAAATAAATAAATATCGCGTGTAGTTACAAATTTATTTTCTAGGGTTTTTCGGGAACTCTAGAAACGAGGCGAGGACTCATTCTATCAGAACATTTCACTCTAACCGCACGAACTAGGTATTTCCCTTTCTCCACTTTCACCATTTTCTCCAAATTCTCAGTATCAATTGTTGTTTACGGTACGAAACCTACTGGATGCTTTTCATTCTCGCCGATTTTCGTCTTAAATTTTGCTTCCATTTCCCTAATTACCTTGGTTTTTGCTGTGCAGGAGGATTTCTTTTTTCTTTCTGAAATCGGGAGATTGATATGGCTGGAAGAGAAGAATACCGAATATTTGTGGGAGGGTTGTCGTGGGACATCACGGAGCGTCAGCTTGAGAATGCCTTCAATCGGTTCGGCAAAATTATCGATTCTCAGGTTACCTTTGTTTATATATATTCGTTTATCTGTGGCTTGATCTATATTGCTGAAAACCGAAGCAATTGGACTTCGTCTAAACTGAACACATTGGAATATGTTATTCATTTATTTCTTATAGGAGAAGGAAATAGAGGAAACTGTAAAATCGGCGTCATTCCGTCAATGTTCATATGTAGAATATAATTTCTAAATTTCCACCCCTTTTTCCTCTGATGACATGGAAGATGAACTTTTACCAACCGAAGCCATAATCTTTTTTTTTTTTTTGCCTCTCTCTCTCAGCATTGTTTTATGATACCTTTAATTTTTCTCCAACCTCTTCTCTTTCTGATGATGTTTCATTTTCCCCTTGTGAATGAGGATGCTGTTAATGAACTTTTTGGGAAGCGGTTTCACTATCCATGTAAAGTTGAATGCACCAAGATGCTGAAGGTCATAGGCTTGTATGTGCTCAAGTGTTATTTGATTTAGGTCTGCTGGTTAAGAAAAAGTGCTACCATTTTGGAAATTGGGAATATGGTTGCCTGCAAACTCAATCTTGTGCTCTAGCTGATTGGGGTTTGGTAGGATTTTAATATGCAAATTCAGCGACTAATTGTTTCTGTGGGATAAAAGAACTTGACATTCTTTTGCAACTGAAATGATTAAAAACCAGAGGAACTATTAACAAGTGACGTGCTGATGCCTGCTTGAGCAAACCTTTCTTGTTTTATTGTTCCTTGATGTTTTTGATGAGGAAGAAGTCACTAAAATGTTTCAGGATCTGACTAATAAACGTTCTAGTATTTGCTTGGAGAATTTTCTTGCTTTGGATGATTATTAAGCCCAACATCTTATCCTTGGCTTACCCTACTTACCAATGGTATAACTAGAAGTTAATGATTAATGATGAAGGTTATGTGGTTATATGAGATGATGCATGGGGCAGAAAGTCGGGGCTAGATTGCTATATTGACTCAGATGACGAGTTTGCTAAGTCATCTTATCTCAGAAAGTTTTCAGAAGCCATATGTCATGGATGGAACGTTTTGTTGTATGAACTACTGGCTGCTTCTTTTTTGTAATGCTTTCTTCGTGTTCCTATCCATGACTAATTACTATTGAAGTGAGAGATAGATAGCTGGTTTCTCATTTGCTAGTTTCACTAGTGTTGAGAGTTGTCAGTTTGATTTAAGATGAAGAATACGTAAAAGTTGTGCATCTTTTCTGGCTAAGATTTATGATAGCATGCAAAGGTACAGTTTGGGAGATCAATAACCATTTCATCCTTTTGAGTGGACACTGCATCTTTGAATTTCATTTTTCTTGGATGAAGTTGCCAGAGTCCCCTACTTTTCCAGGCATGCTCAGAAAGTTATTTGTACTGGTTTCTGTTTAGCAGCTAATGTGGCTAAAAATTGTATTAGTGATGCCAGGCTTAGCAGCTCAGACCTTTTCTGAAGAATTGGCCAAACTGCATTTGTAGTCTTTAGTTTGACATGTTTTCCTTATCGTATGATGTCAGCTGAATTGTAAATTTCAGTTTGAGGACCTTTTCTGATCAGTTGTCTTCTCTGGTGAGCTTGTTAAGTAATATGCGGTGGACTGGACTGTGGACATTGGTGTGGATATGATTGTCATCCAAAGCTTCCAGAGCTCCTAAGGCCTCTGATGTTGGACTACGTTTTCTGTTATGACTGAGCATTATGAATGTCTATTTTCTGGGTATAGTACTGCAGTCTGCAGGAGAGCAATTGGATCTGAAGTTAAATTTGAGTTCCTATAGGTGCAGTGTTGCAGTTCCCATAGGTGCAGTGTTGCAGTTCCCATTTAGAGGAATGGATTTAGGTTGTGGCAACATGAGAAATTATGGAGCTGTAGTTTTTCATTCGTTTGTTTGCATCCTTTTCCTCTTGTTTGGAGTTGTTTCTCAAGATTGGTCAAGAATGCCCGCTGTTTTGTTTTCCTTTTTGTGGTGTCGGTGTACTAGTTTCCTCATTTTATACTCATTGACAGTCTTTGTCTTAGCAGAGTTTGAATTCCTCGATTATTGATTCTATTTAAACTTAAGAGGGGGTTGAATATGAATATGTACCTAGTTTAAGTAATGGTTGCCATGCAAGTTTTTTCGTCATCAAGTTTTCTAGTACAGCCTCTTGTCCACAAACTCTGTGGTTGCCATGCAAGTTGTCGTTATCAAGTTTTCTAGTACAGCCTCTTGTCCACAAACTCTGTGGTTGCCATGCAAGTTGTCTGTCATCACGTTTTCTAGTACAGCCTCTTGTCCACAAACTCTGTGGTTGCCATGCAAGGTGTCATCATCAAGTTTTCTAGTACAGCCTCTTGTGTTCACAAACTGATGGGATCTCTATTTCAGAATTAGTTGGCATCTCCATTGTTTGAAATTTTATGGTGAACCTTGCCTGCATCTCCTAGAGCATTCATCCTGGAAGATAAGTTGTTTAAGGATTCATCTTTCTTTTTTGAGATTTATTCAACTGTCTACTTCACATCACATCCCAATATGATCATGTGACAGCAATGTTGAGGTTAACAAATCCCTTAGTTGGAGTAATACATATATCCAATGAAGTTTTTGTACTGGGTTTTTTTGAGTTAAGATTGACTTTGAGTGCCATATTTGGATGCTGACTGCACAGAAGAAGCCCGTGTAGCCATTTTTTAATGGAATTGTTTCTTTTGGATAAAAGGGGCCTAGAGGCTAAGATACTCTCACTTCAGAAGATAGACCTAAAGATGTGCAGGTTCTTTTGTTTTGTTAAGGAATTATGTAACAAATTGCAATGAGTTCTCCAAAAATGGAAGAAAATGTAAGTTGTCAGACTGTTTAATTATATATTTTAAAACATTTTTATGCTGGTATTGTCAATTACTTTAAACGAGTTCTCTTTGATGTTGTACTTTTTATCGTGTATACAGCATGTGATAGGCTGAACTTCGTCACCAACTTGTACCCATTACTTGTTCTATTTATTCTGCTTCTCTATGGAATGTAGATTTTGTCACCAAATTTTTTAAATGATAATTTGATGGAGTTTAAACCTCTATTTTTAGTAGCTGTTGGAGTTTGGAACCTCTAGATCATGGTAACTGTTTGGTATTGAATTTGTGCCCCTCTCGACATTGCAATAATTGTATTTATGGGCTTGAAGCCCAAAAATGGGTATAGTTATCCATGCTCTTAGATTATGTCCATCAACTCCAAACTTCTAAGGGTTGTCAACTGGGATCTTAAATACCAAAAGAAAACCACCCTATTTTGGTGGTCAGGCCGTAGATTTCATCTTTGAACATTGAGGAAGTGGGCATCCTGGGCTATTAATTTATTTTTAATAGTTGTGGTCTTCATCCCTGTTTTTTTGATACTGGTTTTTGTTGCATTGGACAAATTTACTTTATAATCTAGGGCTAGACTATGCTGATGGCTGGTAGGTTTCAAGTTTTCACTTTGTATACATTATTAGCATGGGACGTACTTTAATCACTTGATTTAAGTTTTATTGGCTGTTCAATTGATTTGCTCTTTGGCATTCCTGTAGATCATGTTGGAAAAGAATACAGGCCGCCCACGTGGCTTTGGCTTTATAACATTTTCAGATCGCCGTGGAATGGATGATGCTATCAGAGAGATGCATGGACAAGAATTTGGAGACCGAATCATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATGGACCATGGTTACAGGGGGGGAGGATACTCAACTGGTGGCAGGGGTAGCTATGGGGGTGGGGGAGGAGATAGATCTGCGAGGCAAGATGAATGCTTCAAATGTGGGCGTCTTGGACACTGGGCTAGAGATTGTCCTTCAGTTGGTGGTGGCCGAGGAAGGGGAGGAGATTCATTTCTTGGACGTTCTCGGCTTGGGGATAGTGATCGTGGGGACCGCTTTGCTGGAGATAATAATCGTTATGTGGATGATCGTTATGAAGGTGGTGGGCGCTTTGGAGATAGAGACCGTTTTGATAGCAGCAGCAGGGACAACAAATATGGAAGTCGTGATCGCTATGTTAGTGACAGGTACTTGCTGATATTTTTTGTGGATTTTTGAGGCATTACTTTCCCTGTCTAAAAATTTATGCCTTTAAAGTAATTATCACTAGGAAATTATAAATGGGCAGAATAGGGATCCAATATCGTTCCTATCCTCTCATTCCTGATTTTATACGTAAATCTGCAGGTACCCACCTGGTGGAGACCGCTTCGGAAGCAGTAGGTATAATAATGAATCTGATCGTTTCCCTGTAAATGGCTATGGCAAAGATAGGGGGTATTATAGAGATGGTGGACCTCGTGGCATTGATAAGTATGGAAGCAGCGGTCCAGCACGTGACGAGGGAAGAAGCTATAGAAACAGACCTGCTCCTTATGATCGCCCTAGCCGTGGTGGGCGGCCATCATCATTTGACCGTTACTAAATGTTTGTATTGTTAGCAGTACATTATCAGGTTTATCTAAAGTACTACATGCTCGGTGTTGTGCTGGTAGTTGTCTAGGATTTAGTTGGAGTACCATGGCCTGACCGACAGACAGATTGTTGCAGTTTTGTGTAGCTTTCATGTATCTGAGTTTTTGTTCAGAGACAGAAAAAATGCTGAAAAGAAAGAGAACAAATTTAAGTTGACCATTTTGTGATCCGTAAAACGGTGAGGTAAATCTCGAAGGGAGTAACATAAGGTTGTCGTGCAGTTTCGTACGATTCATAATCCATAAACAAAATTAGCAAATACAACTCTAGTAGGCAGAGGGACCATATTTGTGTATTTGGCAGCACTTTTTCTTCTGTGCAGAAAAGAGGTATGATAGGGGAAGTAAAAATGAGAAGATGGAAATTGGCCTCCCAATGAGCACCAACAACAAATCTGCTCAGTCAGTTAAGAGAACATGAAAGAGAGGCTTTAATGGAAGAAATTTGGTGACTTACTTCTCCCATTTTCTCAATATCACCGTTTTCTATATTTCTTCCACTCTCTTGTTCCTTATTTTCTCTTTAACTTCTGGGAAAATGAGAGGAAAATGTGTGCATATTTGGAGTGCTTCACTCTTTCTTTCTAATCTCCATTAAATTCTTCAAAAAGTGTACATATTTTGAGTGGTTGACTCTAGAAGCCACATTTGCTGCAAACACACACACATATATTTTGGAAACATTAGAAAAAAAGAGGGGTGAGTCTTAACTGCACGAAAGGTCCCTGCCGGAAAT

mRNA sequence

AAATTGCCTGTCAAACAAAAACTTCAAAATGGGTCATCATTACAAATATAACGCTCTATATATAATTTTGGAGAAGTTTTATTTATTTATTTATTTACAATAATTTTGGAGGAGGGTTTTAATTTAAAAATGAAAAATAAATAAATATCGCGTGTAGTTACAAATTTATTTTCTAGGGTTTTTCGGGAACTCTAGAAACGAGGCGAGGACTCATTCTATCAGAACATTTCACTCTAACCGCACGAACTAGGAGGATTTCTTTTTTCTTTCTGAAATCGGGAGATTGATATGGCTGGAAGAGAAGAATACCGAATATTTGTGGGAGGGTTGTCGTGGGACATCACGGAGCGTCAGCTTGAGAATGCCTTCAATCGGTTCGGCAAAATTATCGATTCTCAGATCATGTTGGAAAAGAATACAGGCCGCCCACGTGGCTTTGGCTTTATAACATTTTCAGATCGCCGTGGAATGGATGATGCTATCAGAGAGATGCATGGACAAGAATTTGGAGACCGAATCATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATGGACCATGGTTACAGGGGGGGAGGATACTCAACTGGTGGCAGGGGTAGCTATGGGGGTGGGGGAGGAGATAGATCTGCGAGGCAAGATGAATGCTTCAAATGTGGGCGTCTTGGACACTGGGCTAGAGATTGTCCTTCAGTTGGTGGTGGCCGAGGAAGGGGAGGAGATTCATTTCTTGGACGTTCTCGGCTTGGGGATAGTGATCGTGGGGACCGCTTTGCTGGAGATAATAATCGTTATGTGGATGATCGTTATGAAGGTGGTGGGCGCTTTGGAGATAGAGACCGTTTTGATAGCAGCAGCAGGGACAACAAATATGGAAGTCGTGATCGCTATGTTAGTGACAGGTACCCACCTGGTGGAGACCGCTTCGGAAGCAGTAGGTATAATAATGAATCTGATCGTTTCCCTGTAAATGGCTATGGCAAAGATAGGGGGTATTATAGAGATGGTGGACCTCGTGGCATTGATAAGTATGGAAGCAGCGGTCCAGCACGTGACGAGGGAAGAAGCTATAGAAACAGACCTGCTCCTTATGATCGCCCTAGCCGTGGTGGGCGGCCATCATCATTTGACCGTTACTAAATGTTTGTATTGTTAGCAGTACATTATCAGGTTTATCTAAAGTACTACATGCTCGGTGTTGTGCTGGTAGTTGTCTAGGATTTAGTTGGAGTACCATGGCCTGACCGACAGACAGATTGTTGCAGTTTTGTGTAGCTTTCATGTATCTGAGTTTTTGTTCAGAGACAGAAAAAATGCTGAAAAGAAAGAGAACAAATTTAAGTTGACCATTTTGTGATCCGTAAAACGGTGAGGTAAATCTCGAAGGGAGTAACATAAGGTTGTCGTGCAGTTTCGTACGATTCATAATCCATAAACAAAATTAGCAAATACAACTCTAGTAGGCAGAGGGACCATATTTGTGTATTTGGCAGCACTTTTTCTTCTGTGCAGAAAAGAGGTATGATAGGGGAAGTAAAAATGAGAAGATGGAAATTGGCCTCCCAATGAGCACCAACAACAAATCTGCTCAGTCAGTTAAGAGAACATGAAAGAGAGGCTTTAATGGAAGAAATTTGGTGACTTACTTCTCCCATTTTCTCAATATCACCGTTTTCTATATTTCTTCCACTCTCTTGTTCCTTATTTTCTCTTTAACTTCTGGGAAAATGAGAGGAAAATGTGTGCATATTTGGAGTGCTTCACTCTTTCTTTCTAATCTCCATTAAATTCTTCAAAAAGTGTACATATTTTGAGTGGTTGACTCTAGAAGCCACATTTGCTGCAAACACACACACATATATTTTGGAAACATTAGAAAAAAAGAGGGGTGAGTCTTAACTGCACGAAAGGTCCCTGCCGGAAAT

Coding sequence (CDS)

ATGGCTGGAAGAGAAGAATACCGAATATTTGTGGGAGGGTTGTCGTGGGACATCACGGAGCGTCAGCTTGAGAATGCCTTCAATCGGTTCGGCAAAATTATCGATTCTCAGATCATGTTGGAAAAGAATACAGGCCGCCCACGTGGCTTTGGCTTTATAACATTTTCAGATCGCCGTGGAATGGATGATGCTATCAGAGAGATGCATGGACAAGAATTTGGAGACCGAATCATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATGGACCATGGTTACAGGGGGGGAGGATACTCAACTGGTGGCAGGGGTAGCTATGGGGGTGGGGGAGGAGATAGATCTGCGAGGCAAGATGAATGCTTCAAATGTGGGCGTCTTGGACACTGGGCTAGAGATTGTCCTTCAGTTGGTGGTGGCCGAGGAAGGGGAGGAGATTCATTTCTTGGACGTTCTCGGCTTGGGGATAGTGATCGTGGGGACCGCTTTGCTGGAGATAATAATCGTTATGTGGATGATCGTTATGAAGGTGGTGGGCGCTTTGGAGATAGAGACCGTTTTGATAGCAGCAGCAGGGACAACAAATATGGAAGTCGTGATCGCTATGTTAGTGACAGGTACCCACCTGGTGGAGACCGCTTCGGAAGCAGTAGGTATAATAATGAATCTGATCGTTTCCCTGTAAATGGCTATGGCAAAGATAGGGGGTATTATAGAGATGGTGGACCTCGTGGCATTGATAAGTATGGAAGCAGCGGTCCAGCACGTGACGAGGGAAGAAGCTATAGAAACAGACCTGCTCCTTATGATCGCCCTAGCCGTGGTGGGCGGCCATCATCATTTGACCGTTACTAA

Protein sequence

MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGIDKYGSSGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Homology
[Close]
BLAST of CcUC05G103470 vs. NCBI nr
Match: XP_038892830.1 (glycine-rich RNA-binding protein RZ1C-like isoform X1 [Benincasa hispida])

HSP 1 Score: 565.5 bits (1456), Expect = 2.7e-157
Identity = 277/287 (96.52%), Postives = 283/287 (98.61%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSY--GGGGGDRSAR 120
           MDDAIREMHGQEFG+RIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSY  GGGGGDRSAR
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSAR 120

Query: 121 QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEG 180
           QDECFKCGRLGHWARDCPSVGGGRGRGGDSFL R+RLGDSDRGDRFAGDNNRYVDDRYEG
Sbjct: 121 QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARARLGDSDRGDRFAGDNNRYVDDRYEG 180

Query: 181 GGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGY 240
           GGRFGDRDRFDSSSRDNKYGSRDRYVS+RYPPGGDRFGSSRYNN+SDRFPVNGYGKDRGY
Sbjct: 181 GGRFGDRDRFDSSSRDNKYGSRDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGY 240

Query: 241 YRDGGPRGIDKYGSSGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 286
           YRDGGPRG+DKYGS GPAR+EGRSYRNRPAPYDRPSRGGRPSSFDRY
Sbjct: 241 YRDGGPRGVDKYGSGGPARNEGRSYRNRPAPYDRPSRGGRPSSFDRY 287

[Close]
BLAST of CcUC05G103470 vs. NCBI nr
Match: XP_008446829.1 (PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo] >XP_008446830.1 PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo] >KAA0034698.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo var. makuwa] >TYK09249.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 563.1 bits (1450), Expect = 1.3e-156
Identity = 276/285 (96.84%), Postives = 279/285 (97.89%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120
           MDDAIREMHGQEFG+RIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120

Query: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGG 180
           ECFKCGRLGHWARDCPSVGGGRGRGGDSFL RSRLGD DRGDRFAGD NRYVDDRYEGGG
Sbjct: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGGG 180

Query: 181 RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYR 240
           RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGS RYNN+SDRFPVNGYGKDRGYYR
Sbjct: 181 RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYYR 240

Query: 241 DGGPRGIDKYGSSGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 286
           D GPRG+DKYGS GPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Sbjct: 241 D-GPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 284

[Close]
BLAST of CcUC05G103470 vs. NCBI nr
Match: KAE8648851.1 (hypothetical protein Csa_008374 [Cucumis sativus])

HSP 1 Score: 562.8 bits (1449), Expect = 1.7e-156
Identity = 276/286 (96.50%), Postives = 281/286 (98.25%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 424 MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 483

Query: 61  MDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSY-GGGGGDRSARQ 120
           MDDAIREMHGQEFG+RIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSY GGGGGDRSARQ
Sbjct: 484 MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 543

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGG 180
           DECFKCGRLGHWARDCPSVGGGRGRGGDSFL RSRLGDSDRGDRFAGD NRYVDDRY+GG
Sbjct: 544 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 603

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYY 240
           GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRY N+SDRFPVNGYGKDRGYY
Sbjct: 604 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 663

Query: 241 RDGGPRGIDKYGSSGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 286
           RDGGPRG+DKYGS GPARDEGRSYRNRPAPYDRP+RGGRPSSFDRY
Sbjct: 664 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 709

[Close]
BLAST of CcUC05G103470 vs. NCBI nr
Match: XP_004142412.1 (glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus] >XP_011655869.1 glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus])

HSP 1 Score: 562.8 bits (1449), Expect = 1.7e-156
Identity = 276/286 (96.50%), Postives = 281/286 (98.25%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSY-GGGGGDRSARQ 120
           MDDAIREMHGQEFG+RIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSY GGGGGDRSARQ
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGG 180
           DECFKCGRLGHWARDCPSVGGGRGRGGDSFL RSRLGDSDRGDRFAGD NRYVDDRY+GG
Sbjct: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYY 240
           GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRY N+SDRFPVNGYGKDRGYY
Sbjct: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 240

Query: 241 RDGGPRGIDKYGSSGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 286
           RDGGPRG+DKYGS GPARDEGRSYRNRPAPYDRP+RGGRPSSFDRY
Sbjct: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286

[Close]
BLAST of CcUC05G103470 vs. NCBI nr
Match: XP_022956605.1 (glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 517.3 bits (1331), Expect = 8.3e-143
Identity = 256/285 (89.82%), Postives = 266/285 (93.33%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITER LENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120
           MDDAIREMHG+EFG+RIISVNKAEPKMGED+DHGYR              GGGDRSARQD
Sbjct: 61  MDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYR--------------GGGDRSARQD 120

Query: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGG 180
           ECFKCGR GHWARDCPSVGGGRGRGGDSFL RSRLGDSDRGDRFAGDNNRYVDDRYEGGG
Sbjct: 121 ECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGG 180

Query: 181 RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYR 240
           RFGDRDRFD +SRD+KYG+RDRYVS+RYPPGGDRFGSSRYNN+SDRFPVNGYGKDRGYYR
Sbjct: 181 RFGDRDRFD-NSRDSKYGTRDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYYR 240

Query: 241 DGGPRGIDKYGSSGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 286
           DGGPRG+DKYGS GPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Sbjct: 241 DGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 270

[Close]
BLAST of CcUC05G103470 vs. ExPASy Swiss-Prot
Match: Q8RWN5 (Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana OX=3702 GN=RZ1C PE=1 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 6.3e-77
Identity = 177/313 (56.55%), Postives = 211/313 (67.41%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MA +E  RIFVGGLS ++T+R LE AF+RFG I+D QIMLE++TGR RGFGFITF+DRR 
Sbjct: 1   MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60

Query: 61  MDDAIREMHGQEFGDRIISVNKAEPKMGED--MDHGYRGG---GYSTGGRGSYGGGGGDR 120
           MD++IREMHG++FGDR+ISVN+AEPK+G D    HG RGG   GYS  G+GS+GGGGG  
Sbjct: 61  MDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGGGGGGG 120

Query: 121 S-ARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGR-SRLGDSD-RGDRFAG-----D 180
               +DECFKCGR+GHWARDCPS GGGRG     F  R S  G SD R DR+A      D
Sbjct: 121 GRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYVD 180

Query: 181 NNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRF-GSSRYNNESDR 240
             RY+DDRY+G  R+G RDRFDS      Y  RDRY SDRY    DRF G  RY+  SDR
Sbjct: 181 RERYIDDRYDGAARYGARDRFDSR---EAYIPRDRYASDRYAAPADRFAGGDRYSRGSDR 240

Query: 241 FPVNGYGKDRGYYRDGGP-RGIDKYG---SSGPAR---DEGRSYRNRP-APYDRPSRGG- 286
           +P   Y K R + RD  P  G D+YG   + GP R   +EGR +R+R  APY+RPSR G 
Sbjct: 241 YPPGSYDKARSFERDIAPSAGSDRYGGGRAGGPIRGGGEEGRGFRSRAGAPYERPSRSGG 300

[Close]
BLAST of CcUC05G103470 vs. ExPASy Swiss-Prot
Match: O22703 (Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana OX=3702 GN=RZ1B PE=2 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.4e-71
Identity = 162/300 (54.00%), Postives = 198/300 (66.00%), Query Frame = 0 

Query: 3   GREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMD 62
           G  E RIFVGGLSWD+TERQLE+ F+R+GKI + QIM+ ++TGRPRGFGFITF+DRRG D
Sbjct: 8   GNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGAD 67

Query: 63  DAIREMHGQEFGDRIISVNKAEPKM-GEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQDE 122
           DAI+ MHG+E G+++ISVNKAEPK+ GED+D   +GGGYS+ G+G+           +DE
Sbjct: 68  DAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGT-----------EDE 127

Query: 123 CFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSD-RGDRFAGDN------------ 182
           CFKC R GHWARDCPS G  R R       RSR+GD D   DR+ GD             
Sbjct: 128 CFKCRRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRY-GDRDLEREREREREF 187

Query: 183 NRYVDDRYE-GGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRF 242
           +RY+D R +  GGR+  RDRFDS    +KY  RD Y  +RY P GDRF S RY       
Sbjct: 188 DRYMDGRRDRDGGRYSYRDRFDSG---DKYEPRDHYPFERYAPPGDRFVSDRYGMPEHHL 247

Query: 243 PVNGYGKDRGYYRDGGPRGI-DKYGSSGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDRY 286
                G++R Y RD   R   D+YG  GP RDEGR YR+RP PYDRPSR GGRPSS++R+
Sbjct: 248 ENEYRGRERSYDRDRYARDTSDRYGDMGPIRDEGRPYRSRPGPYDRPSRPGGRPSSYERW 292

[Close]
BLAST of CcUC05G103470 vs. ExPASy Swiss-Prot
Match: Q9LIN3 (Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana OX=3702 GN=RZ1A PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.4e-31
Identity = 108/291 (37.11%), Postives = 152/291 (52.23%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           M+   EYR F+GGL+W  ++R L +AF ++G +++++++L+K +GR RGFGFITF +++ 
Sbjct: 1   MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60

Query: 61  MDDAIREMHGQEFGDRIISVNKAEPKMG-----EDMDHGYRGGGYSTGGRGSYGGGGGDR 120
           MD+AI  M+G +   R I+V+KA+P  G      D D G   G      R S G GGGD 
Sbjct: 61  MDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRGRDRGYDRDRSRPSGGRGGGD- 120

Query: 121 SARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRY--VD 180
                 CFKCG+ GH+AR+CPS     G G            S + DR++  ++RY   D
Sbjct: 121 ------CFKCGKPGHFARECPSESSRDGGG----------RFSSKDDRYSSKDDRYGAKD 180

Query: 181 DRYEG-GGRFGDR-DRFDS-----SSRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDR 240
           DRY     R+G + DR+ S     SS+D++YGSRD         GG R+G  R    +  
Sbjct: 181 DRYGAKEDRYGAKDDRYSSKDDRYSSKDDRYGSRD--------GGGSRYGPDRSGERAG- 240

Query: 241 FPVNGYGKDRGYYRDGGPRGIDKYGSSGPARDEGRSYRNRPAPYDRPSRGG 278
                     G  RDGG RG        P  +     R+  APYDRP  GG
Sbjct: 241 ----------GRSRDGGSRG-------APGGE-----RHSRAPYDRPRAGG 243

[Close]
BLAST of CcUC05G103470 vs. ExPASy Swiss-Prot
Match: Q03250 (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana OX=3702 GN=RBG7 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.8e-24
Identity = 73/160 (45.62%), Postives = 92/160 (57.50%), Query Frame = 0 

Query: 2   AGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGM 61
           +G  EYR FVGGL+W   +R LE AF ++G +IDS+I+ ++ TGR RGFGF+TF D + M
Sbjct: 3   SGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAM 62

Query: 62  DDAIREMHGQEFGDRIISVNKAEPK-MGEDMDH------GYR---GGGYSTGGRGSYGGG 121
            DAI  M+GQ+   R I+VN+A+ +  G    H      GYR   GGGYS GG GSYGGG
Sbjct: 63  KDAIEGMNGQDLDGRSITVNEAQSRGSGGGGGHRGGGGGGYRSGGGGGYS-GGGGSYGGG 122

Query: 122 GGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLG 152
           GG R          G          S GGGR  GG  + G
Sbjct: 123 GGRREGGGGYSGGGGGYSSRGGGGGSYGGGRREGGGGYGG 161

[Close]
BLAST of CcUC05G103470 vs. ExPASy Swiss-Prot
Match: Q99070 (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor OX=4558 GN=GRP2 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.1e-23
Identity = 71/164 (43.29%), Postives = 93/164 (56.71%), Query Frame = 0 

Query: 6   EYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAI 65
           EYR FVGGL+W      LE AF  FG++IDS+++ ++ TGR RGFGF+TFS  + M DAI
Sbjct: 7   EYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAI 66

Query: 66  REMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGR--GSYGGGGGDRSARQDECF 125
             M+G+E   R I+VN+A+ + G     GY GGG   GGR  G YGGGGG    R++   
Sbjct: 67  ENMNGKELDGRNITVNQAQSRGGGGGGGGYGGGGGGYGGREGGGYGGGGGGYGGRRE--- 126

Query: 126 KCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGD 168
             G  G+        GGG G GG  + GR   G    G  + G+
Sbjct: 127 --GGGGYG-------GGGYGGGGGGYGGREGGGGYGGGGGYGGN 158

[Close]
BLAST of CcUC05G103470 vs. ExPASy TrEMBL
Match: A0A1S3BGN5 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489439 PE=4 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 6.4e-157
Identity = 276/285 (96.84%), Postives = 279/285 (97.89%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120
           MDDAIREMHGQEFG+RIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120

Query: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGG 180
           ECFKCGRLGHWARDCPSVGGGRGRGGDSFL RSRLGD DRGDRFAGD NRYVDDRYEGGG
Sbjct: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGGG 180

Query: 181 RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYR 240
           RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGS RYNN+SDRFPVNGYGKDRGYYR
Sbjct: 181 RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYYR 240

Query: 241 DGGPRGIDKYGSSGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 286
           D GPRG+DKYGS GPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Sbjct: 241 D-GPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 284

[Close]
BLAST of CcUC05G103470 vs. ExPASy TrEMBL
Match: A0A5D3CG30 (Glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002430 PE=4 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 6.4e-157
Identity = 276/285 (96.84%), Postives = 279/285 (97.89%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120
           MDDAIREMHGQEFG+RIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120

Query: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGG 180
           ECFKCGRLGHWARDCPSVGGGRGRGGDSFL RSRLGD DRGDRFAGD NRYVDDRYEGGG
Sbjct: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGGG 180

Query: 181 RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYR 240
           RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGS RYNN+SDRFPVNGYGKDRGYYR
Sbjct: 181 RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYYR 240

Query: 241 DGGPRGIDKYGSSGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 286
           D GPRG+DKYGS GPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Sbjct: 241 D-GPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 284

[Close]
BLAST of CcUC05G103470 vs. ExPASy TrEMBL
Match: A0A6J1GY86 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458292 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 4.0e-143
Identity = 256/285 (89.82%), Postives = 266/285 (93.33%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITER LENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120
           MDDAIREMHG+EFG+RIISVNKAEPKMGED+DHGYR              GGGDRSARQD
Sbjct: 61  MDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYR--------------GGGDRSARQD 120

Query: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGG 180
           ECFKCGR GHWARDCPSVGGGRGRGGDSFL RSRLGDSDRGDRFAGDNNRYVDDRYEGGG
Sbjct: 121 ECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGG 180

Query: 181 RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYR 240
           RFGDRDRFD +SRD+KYG+RDRYVS+RYPPGGDRFGSSRYNN+SDRFPVNGYGKDRGYYR
Sbjct: 181 RFGDRDRFD-NSRDSKYGTRDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYYR 240

Query: 241 DGGPRGIDKYGSSGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 286
           DGGPRG+DKYGS GPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Sbjct: 241 DGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 270

[Close]
BLAST of CcUC05G103470 vs. ExPASy TrEMBL
Match: A0A6J1KMD7 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496986 PE=4 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 5.3e-143
Identity = 255/285 (89.47%), Postives = 266/285 (93.33%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITER LENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120
           MDDAIREMHG+EFG+RIISVNKAEPKMGED+DHGYR              GGGDRSARQD
Sbjct: 61  MDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYR--------------GGGDRSARQD 120

Query: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGG 180
           ECFKCGR GHWARDCPSVGGGRGRGGDSFL RSRLGDSDRGDRFAGDNNRYVDDRYEGGG
Sbjct: 121 ECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGG 180

Query: 181 RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYR 240
           RFGDRDRFD +SRD+KYG+RDRYVS+RYPPGGDRFGSSRYNN+SDRFP+NGYGKDRGYYR
Sbjct: 181 RFGDRDRFD-NSRDSKYGTRDRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKDRGYYR 240

Query: 241 DGGPRGIDKYGSSGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 286
           DGGPRG+DKYGS GPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Sbjct: 241 DGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 270

[Close]
BLAST of CcUC05G103470 vs. ExPASy TrEMBL
Match: A0A6J1CFE7 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010282 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.5e-142
Identity = 267/302 (88.41%), Postives = 272/302 (90.07%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAF+RFGKIIDSQIMLEKNTGR RGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGR-GSYGGGGGDRSARQ 120
           MDDAIREMHGQE G+RIISVNKAEPKMGED+DHGYRG GYSTGGR GSYGGGGGD+SARQ
Sbjct: 61  MDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGAGYSTGGRGGSYGGGGGDKSARQ 120

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGG 180
           DECFKCGRLGHWARDC SVGGGRGR GDSFL RSRLGDSDRGDRFAGDNNRYVDDRYE G
Sbjct: 121 DECFKCGRLGHWARDCHSVGGGRGR-GDSFLARSRLGDSDRGDRFAGDNNRYVDDRYE-G 180

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRG-- 240
           GRFGDRDRFD SSRDNKY SRDRYVSDRYPP GDRFGSS YNN+SDRFPVNGYGKDRG  
Sbjct: 181 GRFGDRDRFD-SSRDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRFPVNGYGKDRGYY 240

Query: 241 --------------YYRDGGPRGIDKYGSSGPARDEGRSYRNRPAPYDRPSRGGRPSSFD 286
                         YYRDGGPRGIDKYGS GPARDEGRSYRNRPAPYDRPSR GRPSSFD
Sbjct: 241 RDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFD 299

[Close]
BLAST of CcUC05G103470 vs. TAIR 10
Match: AT5G04280.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 288.9 bits (738), Expect = 4.5e-78
Identity = 177/313 (56.55%), Postives = 211/313 (67.41%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MA +E  RIFVGGLS ++T+R LE AF+RFG I+D QIMLE++TGR RGFGFITF+DRR 
Sbjct: 1   MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60

Query: 61  MDDAIREMHGQEFGDRIISVNKAEPKMGED--MDHGYRGG---GYSTGGRGSYGGGGGDR 120
           MD++IREMHG++FGDR+ISVN+AEPK+G D    HG RGG   GYS  G+GS+GGGGG  
Sbjct: 61  MDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGGGGGGG 120

Query: 121 S-ARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGR-SRLGDSD-RGDRFAG-----D 180
               +DECFKCGR+GHWARDCPS GGGRG     F  R S  G SD R DR+A      D
Sbjct: 121 GRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYVD 180

Query: 181 NNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRF-GSSRYNNESDR 240
             RY+DDRY+G  R+G RDRFDS      Y  RDRY SDRY    DRF G  RY+  SDR
Sbjct: 181 RERYIDDRYDGAARYGARDRFDSR---EAYIPRDRYASDRYAAPADRFAGGDRYSRGSDR 240

Query: 241 FPVNGYGKDRGYYRDGGP-RGIDKYG---SSGPAR---DEGRSYRNRP-APYDRPSRGG- 286
           +P   Y K R + RD  P  G D+YG   + GP R   +EGR +R+R  APY+RPSR G 
Sbjct: 241 YPPGSYDKARSFERDIAPSAGSDRYGGGRAGGPIRGGGEEGRGFRSRAGAPYERPSRSGG 300

[Close]
BLAST of CcUC05G103470 vs. TAIR 10
Match: AT1G60650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 271.2 bits (692), Expect = 9.7e-73
Identity = 162/300 (54.00%), Postives = 198/300 (66.00%), Query Frame = 0 

Query: 3   GREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMD 62
           G  E RIFVGGLSWD+TERQLE+ F+R+GKI + QIM+ ++TGRPRGFGFITF+DRRG D
Sbjct: 8   GNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGAD 67

Query: 63  DAIREMHGQEFGDRIISVNKAEPKM-GEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQDE 122
           DAI+ MHG+E G+++ISVNKAEPK+ GED+D   +GGGYS+ G+G+           +DE
Sbjct: 68  DAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGT-----------EDE 127

Query: 123 CFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSD-RGDRFAGDN------------ 182
           CFKC R GHWARDCPS G  R R       RSR+GD D   DR+ GD             
Sbjct: 128 CFKCRRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRY-GDRDLEREREREREF 187

Query: 183 NRYVDDRYE-GGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRF 242
           +RY+D R +  GGR+  RDRFDS    +KY  RD Y  +RY P GDRF S RY       
Sbjct: 188 DRYMDGRRDRDGGRYSYRDRFDSG---DKYEPRDHYPFERYAPPGDRFVSDRYGMPEHHL 247

Query: 243 PVNGYGKDRGYYRDGGPRGI-DKYGSSGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDRY 286
                G++R Y RD   R   D+YG  GP RDEGR YR+RP PYDRPSR GGRPSS++R+
Sbjct: 248 ENEYRGRERSYDRDRYARDTSDRYGDMGPIRDEGRPYRSRPGPYDRPSRPGGRPSSYERW 292

[Close]
BLAST of CcUC05G103470 vs. TAIR 10
Match: AT1G60650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 271.2 bits (692), Expect = 9.7e-73
Identity = 162/300 (54.00%), Postives = 198/300 (66.00%), Query Frame = 0 

Query: 3   GREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMD 62
           G  E RIFVGGLSWD+TERQLE+ F+R+GKI + QIM+ ++TGRPRGFGFITF+DRRG D
Sbjct: 8   GNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGAD 67

Query: 63  DAIREMHGQEFGDRIISVNKAEPKM-GEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQDE 122
           DAI+ MHG+E G+++ISVNKAEPK+ GED+D   +GGGYS+ G+G+           +DE
Sbjct: 68  DAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGT-----------EDE 127

Query: 123 CFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSD-RGDRFAGDN------------ 182
           CFKC R GHWARDCPS G  R R       RSR+GD D   DR+ GD             
Sbjct: 128 CFKCRRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRY-GDRDLEREREREREF 187

Query: 183 NRYVDDRYE-GGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRF 242
           +RY+D R +  GGR+  RDRFDS    +KY  RD Y  +RY P GDRF S RY       
Sbjct: 188 DRYMDGRRDRDGGRYSYRDRFDSG---DKYEPRDHYPFERYAPPGDRFVSDRYGMPEHHL 247

Query: 243 PVNGYGKDRGYYRDGGPRGI-DKYGSSGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDRY 286
                G++R Y RD   R   D+YG  GP RDEGR YR+RP PYDRPSR GGRPSS++R+
Sbjct: 248 ENEYRGRERSYDRDRYARDTSDRYGDMGPIRDEGRPYRSRPGPYDRPSRPGGRPSSYERW 292

[Close]
BLAST of CcUC05G103470 vs. TAIR 10
Match: AT3G26420.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 137.5 bits (345), Expect = 1.7e-32
Identity = 108/291 (37.11%), Postives = 152/291 (52.23%), Query Frame = 0 

Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           M+   EYR F+GGL+W  ++R L +AF ++G +++++++L+K +GR RGFGFITF +++ 
Sbjct: 1   MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60

Query: 61  MDDAIREMHGQEFGDRIISVNKAEPKMG-----EDMDHGYRGGGYSTGGRGSYGGGGGDR 120
           MD+AI  M+G +   R I+V+KA+P  G      D D G   G      R S G GGGD 
Sbjct: 61  MDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRGRDRGYDRDRSRPSGGRGGGD- 120

Query: 121 SARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRY--VD 180
                 CFKCG+ GH+AR+CPS     G G            S + DR++  ++RY   D
Sbjct: 121 ------CFKCGKPGHFARECPSESSRDGGG----------RFSSKDDRYSSKDDRYGAKD 180

Query: 181 DRYEG-GGRFGDR-DRFDS-----SSRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDR 240
           DRY     R+G + DR+ S     SS+D++YGSRD         GG R+G  R    +  
Sbjct: 181 DRYGAKEDRYGAKDDRYSSKDDRYSSKDDRYGSRD--------GGGSRYGPDRSGERAG- 240

Query: 241 FPVNGYGKDRGYYRDGGPRGIDKYGSSGPARDEGRSYRNRPAPYDRPSRGG 278
                     G  RDGG RG        P  +     R+  APYDRP  GG
Sbjct: 241 ----------GRSRDGGSRG-------APGGE-----RHSRAPYDRPRAGG 243

[Close]
BLAST of CcUC05G103470 vs. TAIR 10
Match: AT2G21660.1 (cold, circadian rhythm, and rna binding 2 )

HSP 1 Score: 113.2 bits (282), Expect = 3.4e-25
Identity = 73/160 (45.62%), Postives = 92/160 (57.50%), Query Frame = 0 

Query: 2   AGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGM 61
           +G  EYR FVGGL+W   +R LE AF ++G +IDS+I+ ++ TGR RGFGF+TF D + M
Sbjct: 3   SGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAM 62

Query: 62  DDAIREMHGQEFGDRIISVNKAEPK-MGEDMDH------GYR---GGGYSTGGRGSYGGG 121
            DAI  M+GQ+   R I+VN+A+ +  G    H      GYR   GGGYS GG GSYGGG
Sbjct: 63  KDAIEGMNGQDLDGRSITVNEAQSRGSGGGGGHRGGGGGGYRSGGGGGYS-GGGGSYGGG 122

Query: 122 GGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLG 152
           GG R          G          S GGGR  GG  + G
Sbjct: 123 GGRREGGGGYSGGGGGYSSRGGGGGSYGGGRREGGGGYGG 161

The following BLAST results are available for this feature:
BLAST of CcUC05G103470 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038892830.12.7e-15796.52glycine-rich RNA-binding protein RZ1C-like isoform X1 [Benincasa hispida][more]
XP_008446829.11.3e-15696.84PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo] ... [more]
KAE8648851.11.7e-15696.50hypothetical protein Csa_008374 [Cucumis sativus][more]
XP_004142412.11.7e-15696.50glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus] >XP_011655869... [more]
XP_022956605.18.3e-14389.82glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucurbita moschata][more]
BLAST of CcUC05G103470 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8RWN56.3e-7756.55Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana OX=3702 GN=RZ1C PE... [more]
O227031.4e-7154.00Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana OX=3702 GN=RZ1B PE... [more]
Q9LIN32.4e-3137.11Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana OX=3702 GN=RZ1A PE... [more]
Q032504.8e-2445.63Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana OX=3702 GN=RBG7 PE=1 ... [more]
Q990701.1e-2343.29Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor OX=4558 GN=GRP2 PE=2 SV=1[more]
BLAST of CcUC05G103470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BGN56.4e-15796.84glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo OX=3656 GN... [more]
A0A5D3CG306.4e-15796.84Glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo var. makuw... [more]
A0A6J1GY864.0e-14389.82glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita moschata OX=3... [more]
A0A6J1KMD75.3e-14389.47glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita maxima OX=366... [more]
A0A6J1CFE71.5e-14288.41glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Momordica charantia OX=... [more]
BLAST of CcUC05G103470 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G04280.14.5e-7856.55RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... [more]
AT1G60650.19.7e-7354.00RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... [more]
AT1G60650.29.7e-7354.00RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... [more]
AT3G26420.11.7e-3237.11RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... [more]
AT2G21660.13.4e-2545.63cold, circadian rhythm, and rna binding 2 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 121..137
e-value: 1.3E-5
score: 34.6
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 121..137
e-value: 2.3E-8
score: 33.8
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 122..137
score: 11.086722
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 8..81
e-value: 8.3E-29
score: 111.7
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 9..78
e-value: 2.3E-20
score: 72.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 7..85
score: 19.638327
NoneNo IPR availableGENE3D4.10.60.10coord: 117..145
e-value: 1.3E-8
score: 36.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..113
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..208
NoneNo IPR availablePANTHERPTHR15241:SF294GLYCINE-RICH RNA-BINDING PROTEIN RZ1B-LIKEcoord: 1..247
NoneNo IPR availablePANTHERPTHR15241TRANSFORMER-2-RELATEDcoord: 1..247
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 2..116
e-value: 4.1E-31
score: 109.9
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 4..115
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 113..137

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC05G103470.1CcUC05G103470.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding