CcUC05G103360 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCTACGACATGCTCTTCTTCTCTTCTTCCTTTTAAGTTTGGCTTCTTCTTCTATGGTTATGGCGACGTCAAGAGCCATGCTTGTCATAACACCTACTCCAACCACGTCTGTTGGAGCACCTACTCCCACAATTGATGCAAAACCTTCACCACCACAGTCATCTGAAGCTATGTTCGTTGCAAGATCTGACTCGTCAATTTCCATGCCTCCAAGTTTTGGTGACTTTGTTGCTTTTGAGGTTCCTAGTGAAATAGGAGCAAATCCACCAATGCCTAATTGGGTCATTCGAAGTTGTAAGCCTAAAGGTCGAATGAGGTATTCTGCTCCCAGTGATCGTAGGAACAGTGAACCTCTTGTCTCAATTGTATGTTCAAACATGTCATGA ATGGCTCTACGACATGCTCTTCTTCTCTTCTTCCTTTTAAGTTTGGCTTCTTCTTCTATGGTTATGGCGACGTCAAGAGCCATGCTTGTCATAACACCTACTCCAACCACGTCTGTTGGAGCACCTACTCCCACAATTGATGCAAAACCTTCACCACCACAGTCATCTGAAGCTATGTTCGTTGCAAGATCTGACTCGTCAATTTCCATGCCTCCAAGTTTTGGTGACTTTGTTGCTTTTGAGGTTCCTAGTGAAATAGGAGCAAATCCACCAATGCCTAATTGGGTCATTCGAAGTTGTAAGCCTAAAGGTCGAATGAGGTATTCTGCTCCCAGTGATCGTAGGAACAGTGAACCTCTTGTCTCAATTGTATGTTCAAACATGTCATGA ATGGCTCTACGACATGCTCTTCTTCTCTTCTTCCTTTTAAGTTTGGCTTCTTCTTCTATGGTTATGGCGACGTCAAGAGCCATGCTTGTCATAACACCTACTCCAACCACGTCTGTTGGAGCACCTACTCCCACAATTGATGCAAAACCTTCACCACCACAGTCATCTGAAGCTATGTTCGTTGCAAGATCTGACTCGTCAATTTCCATGCCTCCAAGTTTTGGTGACTTTGTTGCTTTTGAGGTTCCTAGTGAAATAGGAGCAAATCCACCAATGCCTAATTGGGTCATTCGAAGTTGTAAGCCTAAAGGTCGAATGAGGTATTCTGCTCCCAGTGATCGTAGGAACAGTGAACCTCTTGTCTCAATTGTATGTTCAAACATGTCATGA MALRHALLLFFLLSLASSSMVMATSRAMLVITPTPTTSVGAPTPTIDAKPSPPQSSEAMFVARSDSSISMPPSFGDFVAFEVPSEIGANPPMPNWVIRSCKPKGRMRYSAPSDRRNSEPLVSIVCSNMS Homology
BLAST of CcUC05G103360 vs. NCBI nr
Match: TYK09256.1 (hypothetical protein E5676_scaffold475G002500 [Cucumis melo var. makuwa]) HSP 1 Score: 169.1 bits (427), Expect = 2.5e-38 Identity = 97/135 (71.85%), Postives = 104/135 (77.04%), Query Frame = 0
BLAST of CcUC05G103360 vs. NCBI nr
Match: KAE8648853.1 (hypothetical protein Csa_008932 [Cucumis sativus]) HSP 1 Score: 121.7 bits (304), Expect = 4.6e-24 Identity = 80/116 (68.97%), Postives = 87/116 (75.00%), Query Frame = 0
BLAST of CcUC05G103360 vs. NCBI nr
Match: KAG6573847.1 (hypothetical protein SDJN03_27734, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 108.6 bits (270), Expect = 4.0e-20 Identity = 69/122 (56.56%), Postives = 82/122 (67.21%), Query Frame = 0
BLAST of CcUC05G103360 vs. NCBI nr
Match: KAG6595583.1 (hypothetical protein SDJN03_12136, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 59.7 bits (143), Expect = 2.2e-05 Identity = 40/114 (35.09%), Postives = 58/114 (50.88%), Query Frame = 0
BLAST of CcUC05G103360 vs. NCBI nr
Match: KAE8649709.1 (hypothetical protein Csa_012565, partial [Cucumis sativus] >KAE8649711.1 hypothetical protein Csa_012458, partial [Cucumis sativus] >KGN55007.2 hypothetical protein Csa_012551, partial [Cucumis sativus]) HSP 1 Score: 54.7 bits (130), Expect = 6.9e-04 Identity = 41/119 (34.45%), Postives = 68/119 (57.14%), Query Frame = 0
BLAST of CcUC05G103360 vs. ExPASy TrEMBL
Match: A0A5D3CFX3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002500 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 1.2e-38 Identity = 97/135 (71.85%), Postives = 104/135 (77.04%), Query Frame = 0
BLAST of CcUC05G103360 vs. ExPASy TrEMBL
Match: A0A0A0KRI3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622650 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 5.0e-32 Identity = 85/112 (75.89%), Postives = 90/112 (80.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|