CcUC05G102610 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC05G102610
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Description40S ribosomal protein S29
LocationCicolChr05: 30500334 .. 30506455 (+)
RNA-Seq ExpressionCcUC05G102610
SyntenyCcUC05G102610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCCATGTGTGAACGAGGTGGCTAGTTTTCAATACCGGAACTCTCCCCCAACTACTCCATTAATTGATTCCACGTACCATATGATGCCCTTTCCCTATCCTTTACCATTAATAGAATAATCGCTTTGGCCGTACAGTGTTTTTCCACTTTTATTCGTGCTATCATCACTGGCTCCCATTTTATCCGACGGCGAAGAAACTCCTATATATATGAAGAGTTCTGCTCTGGAGCGACCTGGTTGATTCTGAATTTGGAACCCTTCCTTGGGAAATGGGCGGAGGCAATGGCCAGAAGGCTAAAATGGCTCGGGAGAGAAACCTGGAGAAACAAAAGTCCTCCAGAGGTAATCAACCTGCCACTCAATTCTCTCAGTTTGGCTCCTGAGAAAATTATTTTCAAAGCCCATGTGACTGCTCTTGATTCCTCTTTCTGTACTTTAACCTTTTGCTTGAGTAATGGAAAGTATAATTAGAAGGCTAATAATACAAAATATATGATGTGCAAACATAAATTTCATTACTAGATCCACCAAACCTAGCTGCTTTGCTAATTTAGATGCCAAATATGATAACTGAGATGATTATTACTGTAACCGCTTTCGTCTTTCTTTCTTCCTTGTGAGGTTTTTTATGATTTCCCTGTATGAAGTTTAGAGTTGATTATGATTGTAATAATTTCCACAGGAAGTCAGCTGGAAACAAACAAGAAAGCCATGACAATACAGGTAAAATTCTGAGTCTTATATACCTAATTTGTTTCCTTGAGAGGGGCAAATTTTGAATCAAAAGCACTATTGTCTCAATTTTGTTAGTGGTTAGTGATAAATTACTCCTTGTTTAAGCTTGATGCTTGAAAACTGTTCATGAAAGTGGGTTATTGTTAATTGGTTGCAGTGCAAGGTATGCATGCAGACATTTATATGTACAACAACAGAGGTGAAGTGCAGGGAGCATGCAGAAGCAAGGCACCCAAAATCTGATGTATATGCATGTTTTCCTCATCTTAAAAAATGATTCCAAACTCTTAACACCCCCCCCCCCCCCCCCCCCCCATGCGAATTATGACCTATAAATCAACTCTTGGCTTTATCCTCTCCTTCTCTTTTGCAATATTAAAGCCTTTCTCAAATGCTCCTAGAGGCTACACGCCTTTCAATGTAATAATAACATATGCTTGTGGTCAAAAAATATATTGATAAAGCTTCAACATTTCTTTCTTGTTTTTCTTTACTTGAACAACTAGTAGTGTAGATTCGGATTTGCAAATGTTTGCCGAATGTTTCCATTAATCAATTGCCTTACACTTGTAGCATATGGTAATGTCTTAGAATTTTTTTTTTTTCTTTTATAAAAACTCATCTCATTTAATCTCATTTAAACGCTTACCTGTGTTTGACTATTTTTGTTTTCATATACAAATTTAATGACATTTTTATTAATGTTAAATTACTATAAATTAATCGCACGAAGGGGCTCCAGTCTGCAGCATTCACTCGTAATTGGTGGTTGAGGTTGGCCAATAATAGAATTAATTAGGAGAGATTAACCATTAAATCGGAAAAATTCAAGTTTATTTTTGTAAAAGTTTTATTCTAAACCAACTTACTGATTTCTTTACGTTTTTTACAAAAATTCATTTTAGGTAAATGAATCACTTGATAAGACATTTCAACCTTTATTATCTTTAGAGGTTAATAAAATGGTGTCACTTTTGTGTAATTGTCAAATAGCTATTTGGGAGTTTGGTATTTTGGCTGTTATTAGCTGCCTAACTTTGAGAAACTTCGCTACTAGTTTCACGTTAAATTTTAGATTCTACATGTTTTTATTTTAATGTATTATTATATTTTTATTGATAAGGTACAAATTAATTATTTTTTTGGAATTATGTATTTATCTTTTTTTTATATGTTGCATCATTTTTCTTCTATTCGTGAAGCACCTGTATTTCTTTGAATTAAATTTAATTAAGAAAAGCCTACAGGTTGCGATGAAACCAAATCATCCACTGCTCGGATTGAAAATAACTAAATGATATTGGTATCGTATGTGATAAGATGATCGAGTTGAGTGATTAGCACAATGGTTTCCACTTGTAGATTCTAAAATTTAGGTCAATATATTTTTGTAATATAGTTTTTAATTACTCAGTATAAAACATATTTGTCGTGCATAATGCGGGAGTAAAAACAGAAATATCTTTTTACTAAGTTGCTGAGTGAGTGCCACGTAGTAGCACTCACCTGAGTACACGAGGATCACCCAGGGCCCATTATACTACAATGAGCGTGAGCATCACGCGAATGCTTACAGGGATCGTGATCACCACGCGCCTCTACCTCTCAATTGGAAAAACCCGAATTCACGAAGTTTCTGTTACGGAACGGAGAGCAGAGGTGTAGTCCACGAAGCGGTAAAAGGTACGGCGTTTTCCAAAATATTTGAATGGCCAATGAAAAGGTCCCAAGTGGATCTTCATAACCAACGCCAACGGTCGCATTGGAATCGGCGAAAGGCAGATCTGGAGAATGAGATTGGGCGGAAAGCGGTTAATATTTCGAATTACGTTCCGCTGGTGCTAACAATACTCTTTAGAGGAGGGAGACGAGAGAGCGAGTTTCGCCAAGTTGCCTTCTACTTTCCTCATCATACAATCTTTATTATAATCAGTTTTAATTTTGTTCATTATCTATCTCTCTCGATTTTGATCTAGGTTTTGAAGCAAATTTTGTCTGGTTTTCGTTGGTGTTTCAGGTGAATTTTATGTTCCTTCAGATTTGAGAGATCTTAGCGTCTCTTCTCTCTTTAAACTCTTCTCTCACTGGAGTAGAAGCAGAGAATTCGAGAATGGAATGGTGGAGGAAGATGACTTCTCCGTTGCGAAGTTTTACCTTCAGAGTCGCCGCTCGTCTCGGATTTCGCAAACGCGGTGAGTGATTTCTTTACTAAAATCTCTTCTAATCTATTAATTCTCGATTGCTGGAGAATATATGCTATACGGATTCTCAATTCCAAGCGTAGGGATATATATAGGAAGGACTGAGTACTGCTAATTAATCTGTGGAATTGAAATTCAGAACGGATTGGTTCTTTCTTTTGTTGATCTAGAAGCTGAGAAATGGAATAGTGAATGAATGATTGGGAATTTTGAAATGAATTAAGGGCTAGTGAAACTTGGGCGAGATGTGAAGGCTTGTGAATACGAGGACGTGCACGTGATGTGGGAGATGTTGAAGAGAAACGAAACGGATCAGGTAATTGGATTGTCGGAAAGGCGCCGAAAAAGGAGATCGTTATGGAATATATTTTGGTGGGCTCGATCGGCTCCATGCATTGGCGGAGGATTCTGAAGAATCAAATCAGCTACCACCTTTGGTTAAATCCAACACCATGAATTTGGGTCATAAGGTAACCAGGTAATGAAGAGATTTTAAAAACAAAGGTAGCATCTATCCATATTGTCTAATTAAGATGTTACTTGTTTGTTTAGAAAAACTAGCACTACTACATAGATAACTTACTGATTACCTAGTTTAATCCAATCTTGATCATGACCCCCTCTCTTCTCTCCTTACTTTCTTTATCTTTATATTTTCTACCAAATAATAAAACTAGATTTGGGTGTATGTCGCCTCTTGTATAATTTTGCCTTCAATTTCTTCTTCCCCTCGACTTCATCTCTACTTCTCATTTCTGATTTGAGTTGACTGTGACAATTGGTTGGTATCCAGAATTCCGATCACACGTTTGCAATATTTGTCTGTCTCCCATGATCGCATATTTGCATCAGACGCATATTCGTTGACATCTGATTCGATAACCAATCAATTACTACACTTTGGTCCTTGCACATATTCGCATCAGACACATATGGTTTAGTCTCCAAAATTTGAGTTTAATCTGACCACAGTGTCTCTTACACTTCTACATTTGAATATTAAATTTTTACTAATATCCACTAGTAATTGTGTTAATTTTAAAATATTAATTAATAATCAAATTAGTTTTCATTAATTTTTAAGTCATTATTAAAAATTAATTTCAAACTTACATCATATTATTATTTTTAAGTAAAACAATTTAAATTTGAAATAACAATTTAAGATTAGATATGTCTTTTGCGAACCCAACATCATCCACCAAGGGTTACCAAGAGTAATTGGGTTACTAAGGGCAATTGATAAGCCAACTAAAGTAAGCATGGATGGTAACTTGGATACATTTCAGAGTCACGTATAAAAAGAATTTAAATAAATTTTTTTTAGAACTTTGTTTTTTTATATGGCAAATTATGATTGGACAATTTGTTGAAGACGAAAGATAGATTAAAATTGTACTTTTTACCAACTCAATATCTTTATTTCCTATTCCCTTAATTATTATAGGCCTTTATTTCCTATTCCCTCAATTATTATAGGCCTATTCCAGTAGTTAATTCTACAAGTTAAAGTATGAGAACTTTAAAAAATGTATTCAATATGTCCAATTTAATTTTTCAAAATAAATTTCATGTACCACCTACTCGACACAAGTTTAAATGTTTACTAAACATTAGACTATAGTAATTACAACTCATTAAACACAAAATTTAAAATTGAAGTACTTATAGGATTCTCGTCATATTAGTTGGTGTTTTTAACAACATAGACTTAACTATTTGAGATTTTAATTATAATTATTATTTCAAATCTTCTCTTTTCTTCTTTATTATACTATCTAGAACTAAAATAGATGTTATAATAACCAAACTGAAATAGAATGTACCTAAACAACAAATTATATAACTCATCACAATTTAGTAAACTTTGTAATTAAAATTTTTTTTATTATTATTTATTTTTATTTTCTCATTCGCAGATGCTAAAACATAAAAGGTCGGCAAACGATGCAATGTTTTTTTTCAAAGTAACAATTATTTTTCGTTTCATTTTATTTTTTTGGAAACGAATGAATTACAAATTTTTAAATCTGCGAAGAGGCCGTGGGAAAGCGGTGCTTTTGTCCACGATTTTGATTTCGGTGATTAAACGGTGCGTTTCAAGAGGCGGTTGCTATTGGCATCCGGGAGCTGCTCTATATAAACGATGCAGCCGTCTAGGGTTATAAGGTTTTGCGAATTTAGAAGCGGCTGTCAGAGTTGAAAAGGGTTTCTAAGGTAATCGATCAACGAAGAAGACGATGGGGCATTCAAACGTGTGGAATTCACATCCAAAGAACTATGGACCTGGTTCTCGTACTTGGTATGCCTCCTCCTACAATTTTGATCCATGTTCAATGCTGCTCTTTGAACTGTTCATATAATTTTGATCTTATTGGCCCTTATTTCGGGGCGGATCTCTGATCTGTTGTCGTATCTGGCATTCGACTGGGATTCTCTTTGACCAATTCGATTGCATTGTTCTTATGAACATAAACTCAATTGAAAAATAGGCTGATTCTTGAATTTGAGACTACAATGCTGGTTTGCGCAAAACATTTATCATCTTAATGTTTGAGTGATTGTTCTTTCCCAGCCGAGTCTGCGGAAACCCCCATGGATTGATCCGCAAGTATGGCCTGATGTGCTGCAGGCAGTGCTTCCGTAGTAATGCCAAAGAAATTGGCTTCATCAAGGTAAATTAAATTTCTTCTCCACCACCCATTTATAATATTTGCATCTTCCCTTGCTGTAACTTATTGGTTAAAATTTTTTGGTGCTGGTTGGTAGTTGCCTATGAATAATTGATACACAAAATAGAATGTTATATACCCTTCAACAATCAGTGCGTAAGATTATTAAGATATAAATTTCAGTTCATTGGCTGCTTAAATTTATGATCATGCATTGTATTCTGTGTTTGCAGTACCGTTGAAAATGGAGCTCTTGGTCCTCAGAGTTTTCATGAGCATGCTGGTTTCTTGATTTTTCTTGGTTTAGTCTATTTATAATGAAATGAATTTCCAATCCATTACGATCGAAAGAATTGTCAGTTGCAATTCACAACCAATCAGACTTGGGAGTTTAGGAGAAGGCAGCTATGGTTATATGTTTTTTGATGCACTTTAATGGCTGTTGTTATACTTATTCAATGTGACTAAATGAAATTTCATTTGAAAAATGTGAATATATGATAAGTTGCGTT

mRNA sequence

CTTCCATGTGTGAACGAGGTGGCTAGTTTTCAATACCGGAACTCTCCCCCAACTACTCCATTAATTGATTCCACGTACCATATGATGCCCTTTCCCTATCCTTTACCATTAATAGAATAATCGCTTTGGCCGTACAGTGTTTTTCCACTTTTATTCGTGCTATCATCACTGGCTCCCATTTTATCCGACGGCGAAGAAACTCCTATATATATGAAGAGTTCTGCTCTGGAGCGACCTGGTTGATTCTGAATTTGGAACCCTTCCTTGGGAAATGGGCGGAGGCAATGGCCAGAAGGCTAAAATGGCTCGGGAGAGAAACCTGGAGAAACAAAAGTCCTCCAGAGGAAGTCAGCTGGAAACAAACAAGAAAGCCATGACAATACAGTGCAAGGTATGCATGCAGACATTTATATGTACAACAACAGAGGTGAAGTGCAGGGAGCATGCAGAAGCAAGGCACCCAAAATCTGATGGCCCATTATACTACAATGAGCGTGAGCATCACGCGAATGCTTACAGGGATCGTGATCACCACGCGCCTCTACCTCTCAATTGGAAAAACCCGAATTCACGAAGTTTCTGTTACGGAACGGAGAGCAGAGGTGTAGTCCACGAAGCGGTAAAAGGTGAATTTTATGTTCCTTCAGATTTGAGAGATCTTAGCGTCTCTTCTCTCTTTAAACTCTTCTCTCACTGGAGTAGAAGCAGAGAATTCGAGAATGGAATGGTGGAGGAAGATGACTTCTCCGTTGCGAAGTTTTACCTTCAGAGTCGCCGCTCGTCTCGGATTTCGCAAACGCGCCGAGTCTGCGGAAACCCCCATGGATTGATCCGCAAGTATGGCCTGATGTGCTGCAGGCAGTGCTTCCGTAGTAATGCCAAAGAAATTGGCTTCATCAAGTACCGTTGAAAATGGAGCTCTTGGTCCTCAGAGTTTTCATGAGCATGCTGGTTTCTTGATTTTTCTTGGTTTAGTCTATTTATAATGAAATGAATTTCCAATCCATTACGATCGAAAGAATTGTCAGTTGCAATTCACAACCAATCAGACTTGGGAGTTTAGGAGAAGGCAGCTATGGTTATATGTTTTTTGATGCACTTTAATGGCTGTTGTTATACTTATTCAATGTGACTAAATGAAATTTCATTTGAAAAATGTGAATATATGATAAGTTGCGTT

Coding sequence (CDS)

ATGGGCGGAGGCAATGGCCAGAAGGCTAAAATGGCTCGGGAGAGAAACCTGGAGAAACAAAAGTCCTCCAGAGGAAGTCAGCTGGAAACAAACAAGAAAGCCATGACAATACAGTGCAAGGTATGCATGCAGACATTTATATGTACAACAACAGAGGTGAAGTGCAGGGAGCATGCAGAAGCAAGGCACCCAAAATCTGATGGCCCATTATACTACAATGAGCGTGAGCATCACGCGAATGCTTACAGGGATCGTGATCACCACGCGCCTCTACCTCTCAATTGGAAAAACCCGAATTCACGAAGTTTCTGTTACGGAACGGAGAGCAGAGGTGTAGTCCACGAAGCGGTAAAAGGTGAATTTTATGTTCCTTCAGATTTGAGAGATCTTAGCGTCTCTTCTCTCTTTAAACTCTTCTCTCACTGGAGTAGAAGCAGAGAATTCGAGAATGGAATGGTGGAGGAAGATGACTTCTCCGTTGCGAAGTTTTACCTTCAGAGTCGCCGCTCGTCTCGGATTTCGCAAACGCGCCGAGTCTGCGGAAACCCCCATGGATTGATCCGCAAGTATGGCCTGATGTGCTGCAGGCAGTGCTTCCGTAGTAATGCCAAAGAAATTGGCTTCATCAAGTACCGTTGA

Protein sequence

MGGGNGQKAKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSDGPLYYNEREHHANAYRDRDHHAPLPLNWKNPNSRSFCYGTESRGVVHEAVKGEFYVPSDLRDLSVSSLFKLFSHWSRSREFENGMVEEDDFSVAKFYLQSRRSSRISQTRRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Homology
[Close]
BLAST of CcUC05G102610 vs. NCBI nr
Match: KAE8649878.1 (hypothetical protein Csa_012522 [Cucumis sativus])

HSP 1 Score: 141.0 bits (354), Expect = 1.2e-29
Identity = 69/82 (84.15%), Postives = 74/82 (90.24%), Query Frame = 0 

Query: 130 LSVSSLFKLFSHWSRSR-EFENGMVEEDDFSVAKFYLQSRRSSRISQTRRVCGNPHGLIR 189
           L+  SLF LFSHWSRSR E +NGMV++D+ SV KFYLQSR SSRISQTRRVCGNPHGLIR
Sbjct: 33  LASLSLFDLFSHWSRSRGEPQNGMVDQDERSVEKFYLQSRLSSRISQTRRVCGNPHGLIR 92

Query: 190 KYGLMCCRQCFRSNAKEIGFIK 211
           KYGLMCCRQCFRSNAKEIGFIK
Sbjct: 93  KYGLMCCRQCFRSNAKEIGFIK 114

[Close]
BLAST of CcUC05G102610 vs. NCBI nr
Match: XP_008452628.1 (PREDICTED: uncharacterized protein At2g23090-like [Cucumis melo] >KAA0064431.1 uncharacterized protein E6C27_scaffold255G001420 [Cucumis melo var. makuwa] >TYK20157.1 uncharacterized protein E5676_scaffold134G002860 [Cucumis melo var. makuwa])

HSP 1 Score: 132.5 bits (332), Expect = 4.3e-27
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MGGGNGQKAKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60
          MGGGNGQKAKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE
Sbjct: 1  MGGGNGQKAKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60

Query: 61 ARHPKSD 68
          ARHPKSD
Sbjct: 61 ARHPKSD 67

[Close]
BLAST of CcUC05G102610 vs. NCBI nr
Match: XP_038897649.1 (uncharacterized protein At2g23090-like [Benincasa hispida])

HSP 1 Score: 131.3 bits (329), Expect = 9.6e-27
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MGGGNGQKAKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60
          MGGGNGQK+KMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE
Sbjct: 1  MGGGNGQKSKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60

Query: 61 ARHPKSD 68
          ARHPKSD
Sbjct: 61 ARHPKSD 67

[Close]
BLAST of CcUC05G102610 vs. NCBI nr
Match: XP_004141283.1 (uncharacterized protein At2g23090 [Cucumis sativus] >KGN55255.1 hypothetical protein Csa_012030 [Cucumis sativus])

HSP 1 Score: 131.3 bits (329), Expect = 9.6e-27
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MGGGNGQKAKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60
          MGGGNGQKAKMARERNLEKQK+SRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE
Sbjct: 1  MGGGNGQKAKMARERNLEKQKASRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60

Query: 61 ARHPKSD 68
          ARHPKSD
Sbjct: 61 ARHPKSD 67

[Close]
BLAST of CcUC05G102610 vs. NCBI nr
Match: XP_022143957.1 (uncharacterized protein At2g23090-like isoform X2 [Momordica charantia])

HSP 1 Score: 129.0 bits (323), Expect = 4.8e-26
Identity = 64/67 (95.52%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MGGGNGQKAKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60
          MGGGNGQKA+MARERN+EKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE
Sbjct: 1  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60

Query: 61 ARHPKSD 68
          ARHPKS+
Sbjct: 61 ARHPKSE 67

[Close]
BLAST of CcUC05G102610 vs. ExPASy Swiss-Prot
Match: O64818 (Uncharacterized protein At2g23090 OS=Arabidopsis thaliana OX=3702 GN=At2g23090 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 7.4e-22
Identity = 53/68 (77.94%), Postives = 62/68 (91.18%), Query Frame = 0 

Query: 1  MGGGNGQKAKMARERNLEKQKSS-RGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHA 60
          MGGGN QK+ MAR +NLEK K++ +GSQLE NKKAM+IQCKVCMQTFICTT+EVKCREHA
Sbjct: 1  MGGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHA 60

Query: 61 EARHPKSD 68
          EA+HPK+D
Sbjct: 61 EAKHPKAD 68

[Close]
BLAST of CcUC05G102610 vs. ExPASy Swiss-Prot
Match: Q680P8 (40S ribosomal protein S29 OS=Arabidopsis thaliana OX=3702 GN=RPS29A PE=3 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 2.2e-13
Identity = 34/39 (87.18%), Postives = 35/39 (89.74%), Query Frame = 0 

Query: 174 SQTRRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 213
           S+  RVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Sbjct: 18  SRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56

[Close]
BLAST of CcUC05G102610 vs. ExPASy Swiss-Prot
Match: Q5I7K3 (40S ribosomal protein S29 OS=Triticum aestivum OX=4565 GN=RPS29 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.2e-13
Identity = 33/39 (84.62%), Postives = 36/39 (92.31%), Query Frame = 0 

Query: 174 SQTRRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 213
           S+  RVCGN HGLIRKYGLMCCRQCFRS+AK+IGFIKYR
Sbjct: 18  SRVCRVCGNSHGLIRKYGLMCCRQCFRSDAKDIGFIKYR 56

[Close]
BLAST of CcUC05G102610 vs. ExPASy Swiss-Prot
Match: Q7XYB0 (40S ribosomal protein S29 OS=Griffithsia japonica OX=83288 GN=RPS29 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.9e-10
Identity = 28/50 (56.00%), Postives = 37/50 (74.00%), Query Frame = 0 

Query: 163 FYLQSRRSSRISQTRRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 213
           +Y   R+  + S++ ++CGN HGLIRKY +  CRQCFR  AK+IGFIKYR
Sbjct: 7   WYSHPRKYGKGSRSCKICGNKHGLIRKYSMNICRQCFREYAKDIGFIKYR 56

[Close]
BLAST of CcUC05G102610 vs. ExPASy Swiss-Prot
Match: P62276 (40S ribosomal protein S29 OS=Bos taurus OX=9913 GN=RPS29 PE=3 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 5.5e-09
Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 0 

Query: 163 FYLQSRRSSRISQTRRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK 211
           ++   R+  + S++ RVC N HGLIRKYGL  CRQCFR  AK+IGFIK
Sbjct: 7   YWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54

[Close]
BLAST of CcUC05G102610 vs. ExPASy TrEMBL
Match: A0A5A7VFF4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002860 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.1e-27
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MGGGNGQKAKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60
          MGGGNGQKAKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE
Sbjct: 1  MGGGNGQKAKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60

Query: 61 ARHPKSD 68
          ARHPKSD
Sbjct: 61 ARHPKSD 67

[Close]
BLAST of CcUC05G102610 vs. ExPASy TrEMBL
Match: A0A1S3BU86 (uncharacterized protein At2g23090-like OS=Cucumis melo OX=3656 GN=LOC103493591 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.1e-27
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MGGGNGQKAKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60
          MGGGNGQKAKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE
Sbjct: 1  MGGGNGQKAKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60

Query: 61 ARHPKSD 68
          ARHPKSD
Sbjct: 61 ARHPKSD 67

[Close]
BLAST of CcUC05G102610 vs. ExPASy TrEMBL
Match: A0A0A0KZW6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642360 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 4.6e-27
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MGGGNGQKAKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60
          MGGGNGQKAKMARERNLEKQK+SRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE
Sbjct: 1  MGGGNGQKAKMARERNLEKQKASRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60

Query: 61 ARHPKSD 68
          ARHPKSD
Sbjct: 61 ARHPKSD 67

[Close]
BLAST of CcUC05G102610 vs. ExPASy TrEMBL
Match: A0A6J1CSB6 (uncharacterized protein At2g23090-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013659 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.3e-26
Identity = 64/67 (95.52%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MGGGNGQKAKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60
          MGGGNGQKA+MARERN+EKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE
Sbjct: 1  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60

Query: 61 ARHPKSD 68
          ARHPKS+
Sbjct: 61 ARHPKSE 67

[Close]
BLAST of CcUC05G102610 vs. ExPASy TrEMBL
Match: A0A6P3ZUE5 (uncharacterized protein At2g23090-like isoform X1 OS=Ziziphus jujuba OX=326968 GN=LOC107420583 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.9e-25
Identity = 62/67 (92.54%), Postives = 66/67 (98.51%), Query Frame = 0 

Query: 1   MGGGNGQKAKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60
           MGGGNGQK+KMARERNLEKQK +RGSQLE+NKKAMTIQCKVCMQTFICTTTEVKCREHAE
Sbjct: 65  MGGGNGQKSKMARERNLEKQKQNRGSQLESNKKAMTIQCKVCMQTFICTTTEVKCREHAE 124

Query: 61  ARHPKSD 68
           A+HPKSD
Sbjct: 125 AKHPKSD 131

[Close]
BLAST of CcUC05G102610 vs. TAIR 10
Match: AT2G23090.1 (Uncharacterised protein family SERF )

HSP 1 Score: 105.5 bits (262), Expect = 5.2e-23
Identity = 53/68 (77.94%), Postives = 62/68 (91.18%), Query Frame = 0 

Query: 1  MGGGNGQKAKMARERNLEKQKSS-RGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHA 60
          MGGGN QK+ MAR +NLEK K++ +GSQLE NKKAM+IQCKVCMQTFICTT+EVKCREHA
Sbjct: 1  MGGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHA 60

Query: 61 EARHPKSD 68
          EA+HPK+D
Sbjct: 61 EAKHPKAD 68

[Close]
BLAST of CcUC05G102610 vs. TAIR 10
Match: AT3G43980.1 (Ribosomal protein S14p/S29e family protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-14
Identity = 34/39 (87.18%), Postives = 35/39 (89.74%), Query Frame = 0 

Query: 174 SQTRRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 213
           S+  RVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Sbjct: 18  SRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56

[Close]
BLAST of CcUC05G102610 vs. TAIR 10
Match: AT3G44010.1 (Ribosomal protein S14p/S29e family protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-14
Identity = 34/39 (87.18%), Postives = 35/39 (89.74%), Query Frame = 0 

Query: 174 SQTRRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 213
           S+  RVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Sbjct: 18  SRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56

[Close]
BLAST of CcUC05G102610 vs. TAIR 10
Match: AT4G33865.1 (Ribosomal protein S14p/S29e family protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-14
Identity = 34/39 (87.18%), Postives = 35/39 (89.74%), Query Frame = 0 

Query: 174 SQTRRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 213
           S+  RVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Sbjct: 18  SRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56

The following BLAST results are available for this feature:
BLAST of CcUC05G102610 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8649878.11.2e-2984.15hypothetical protein Csa_012522 [Cucumis sativus][more]
XP_008452628.14.3e-27100.00PREDICTED: uncharacterized protein At2g23090-like [Cucumis melo] >KAA0064431.1 u... [more]
XP_038897649.19.6e-2798.51uncharacterized protein At2g23090-like [Benincasa hispida][more]
XP_004141283.19.6e-2798.51uncharacterized protein At2g23090 [Cucumis sativus] >KGN55255.1 hypothetical pro... [more]
XP_022143957.14.8e-2695.52uncharacterized protein At2g23090-like isoform X2 [Momordica charantia][more]
BLAST of CcUC05G102610 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O648187.4e-2277.94Uncharacterized protein At2g23090 OS=Arabidopsis thaliana OX=3702 GN=At2g23090 P... [more]
Q680P82.2e-1387.1840S ribosomal protein S29 OS=Arabidopsis thaliana OX=3702 GN=RPS29A PE=3 SV=2[more]
Q5I7K32.2e-1384.6240S ribosomal protein S29 OS=Triticum aestivum OX=4565 GN=RPS29 PE=1 SV=1[more]
Q7XYB02.9e-1056.0040S ribosomal protein S29 OS=Griffithsia japonica OX=83288 GN=RPS29 PE=3 SV=1[more]
P622765.5e-0958.3340S ribosomal protein S29 OS=Bos taurus OX=9913 GN=RPS29 PE=3 SV=2[more]
BLAST of CcUC05G102610 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VFF42.1e-27100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BU862.1e-27100.00uncharacterized protein At2g23090-like OS=Cucumis melo OX=3656 GN=LOC103493591 P... [more]
A0A0A0KZW64.6e-2798.51Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642360 PE=4 SV=1[more]
A0A6J1CSB62.3e-2695.52uncharacterized protein At2g23090-like isoform X2 OS=Momordica charantia OX=3673... [more]
A0A6P3ZUE51.9e-2592.54uncharacterized protein At2g23090-like isoform X1 OS=Ziziphus jujuba OX=326968 G... [more]
BLAST of CcUC05G102610 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G23090.15.2e-2377.94Uncharacterised protein family SERF [more]
AT3G43980.11.5e-1487.18Ribosomal protein S14p/S29e family protein [more]
AT3G44010.11.5e-1487.18Ribosomal protein S14p/S29e family protein [more]
AT4G33865.11.5e-1487.18Ribosomal protein S14p/S29e family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001209Ribosomal protein S14PFAMPF00253Ribosomal_S14coord: 169..212
e-value: 2.0E-10
score: 40.2
IPR026939ZNF706/At2g23090 superfamilyGENE3D4.10.1050.10coord: 1..70
e-value: 1.3E-27
score: 97.9
IPR007513Uncharacterised protein family SERF, N-terminalPFAMPF044194F5coord: 3..35
e-value: 1.1E-6
score: 29.4
IPR039438At2g23090-like, zinc-binding domainPFAMPF12907zf-met2coord: 38..67
e-value: 5.7E-15
score: 55.1
IPR043140Ribosomal protein S14/S29GENE3D4.10.830.1030s Ribosomal Protein S14; Chain Ncoord: 140..211
e-value: 1.0E-21
score: 78.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availablePANTHERPTHR33788:SF14SUBFAMILY NOT NAMEDcoord: 1..67
NoneNo IPR availableSUPERFAMILY118359Expressed protein At2g23090/F21P24.15coord: 1..69
IPR039713At2g23090-likePANTHERPTHR33788OS07G0114300 PROTEINcoord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC05G102610.1CcUC05G102610.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome