CcUC05G101960 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC05G101960
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr05: 30029158 .. 30034173 (-)
RNA-Seq ExpressionCcUC05G101960
SyntenyCcUC05G101960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTAATGCAGCAACAAAATTGGTCCCTCAACTACATTAATACATTTCAAAATAATGTCCAAATTGTGACACCAATTATTCTATTTTTCATCCATAATTCATAACCACACCACCTTCTTCCTTTGTTTCTTCTTACTCAACATTTCAATATAAAGACATTCCTTTTTTCTCCCTCTACTATACAGCAGACATAATGGTCCACATTGTTGCACAAAAACAGCCAACCATTGCAGTTGCTTCAAGTACAAGCCCTGTTTGTTTAAAGCAAGGGAACATTATTTGATATAGTTGATATTATGTTAATGGTCCCTTTTATAGAAAGGGGAAATTTTTTTGCATAACTTTGCATTTAATGGTTACACAAATAATTGTCACTAACACCTTTAAGAACAAGAACCTATTTAAAACGAGATGGATTTTTTGGTTTTAATCTCACAAGTCCTACCAATAATCCGACCAATTATTTCTAAAACGGTAAATATTATTCCCCTACTGCTTCAGCTTGTGGAAGTGCATGCAATTATGAAGTGAAAAGTTTGGCAATAAGTGACCTTCAATGTTATTAGTAATTTGGAATAAACCATCGTTAATAAGTTAAATAATTTGAAGATAATGTAAAATTAAATTGAATTAGACTTTTGTTTACCGAAGTTACCTACCCATCCCCCCATCTACAACCAAAGTTGGATTGTTTTTCTCATTTTTGGGAGAAAGAATACAGTAATAGATTTGGATTGCACATATGGAATATATATAAATGCAAATGAAAATAAGATCAACAACGCCATTTATTCATACATTCTCAAACCACCTAAACTAAGCCATGTACTTTGTACGGGAAAATGGCTAAAATTCTAAAAAAAATTTTAAAAAATGCACACATAATGGACTTAGCTTCTCGATTCTCACTCCAACTTATCGAAAATGGTAGCCTTCTTCACTTTTTTTCTCTTTGTTTTACAGCCTCTTGGAATTTTTTTCTTCAACAACCCCTTAAATTTTCTTTTCTTTGTTCTACAACCTCCTCTTAGATTTTTTTCTTCATTCTACAACCTCTTGGATGTTTTTTGCTTCGTTTTGCAACAATCTCTTGGATTTTATTTTTTTTTTCATTCTGCAACCTCTTTCCTCTGTGAGTCCAATCTTCAGGAGCGTGGGAATCAACCCTCCCTCGCAGAGGAATGGAGAAACACAGTTTATTCACCCAAAATCAAGAAGTGAATAGCGAGAAGATCTTTTACCATAGAAGCAAATTGAGGAGGAGATGGAAGAGCAACAATCTAGGAGTGAGAGCAAGATCCTCGCCCATCGCATGTGTATTTTGATTGTCTTGGTAATTTCACCCAAGGATGATATAAACAAAAACTTACATTTTCAAAAAGTGGACTAGATCTCATCCGGACCCTCAAAAGAAGTCATCCATACAAAAATCCTTAAGATATAGGATTGTTGATATATTCAAATATATAGATAAAAGAATCAATTATTATCTCAAAAGTCCATAGCCGCTGAGTTCATTTATTAAGAAAATCAAATATTGCAATAAACTGTCTCCCACATAAATAACCGTCCTTTAGTATTTTGGCGACACACGGCTGAGCAAAATGGGACAGGCTCCTTAGGAATTGGTAACCATTTCAGAAGCTAAATTACATTGGTCCTAGAAAACTATGTCAGAGAGGCTATACACAAATAAAATCAAACTCGACACATCTGAGATATCCAGCCGCAATGTTTTCGCTAACCTCCTCGATGTAAAAGAGAAGGCATTAGATTCTCCAACATCTCAAAATAATGTCTGAATCAGATCCATTGTGATGTCTAATGAGGGAGAAAAAGGTTATTAGTGTTTATTATTCCTCTCCCATGAGGCCAATTGTAACATAATTCTATTGTTTTCTAACCTCAGTTGGTTGAATCAGTACTCTCCATGCTCCTTCCATTCTTCTTGTGTAGTCTGTTGGCTGAATCCACAGCCTATGTCATGCTTTGCCCACTTCTTGAATGTGTTGAGAGTGGCTTTTGCCAGGTGGAATGAAAATCAGATCTTCCCAGGCTGAATTCTTTTCATTCAACTGTAATTGATCAAGAAAACTAAGACGGAGTGCAATTTCTATATTCTAAAAGATGCTGCTACTTGAGATCAAGAAACCTCACCTCCATTTTCTTAAGAACATCTTCCAAACTGCCAACCTGTTGTATAATGTATTACAGTTTAAGTTAAATGAGGGGAAGAAATAATATAACTGTAGACTAACTGAACAGATAATTTTTTTCACAAGAAAGAAACATTGAATGATCATACACAAATTTTCACTTGCAGGATAATAATTTCAGACATTCTGGTTTGTATTTAAAGCTTAAACCAATTTCATCAACACTATCATTTCCAATTTGTCATTTAACAGATAGTGGCATATCTGACGGGCGAGATTACTTCTAAAATGTAATAAGTAATAATGTATCAAAATGCAAAATAAGGGGGGAAAATTGCAAAACGCTATATTACAGGGAACACTGGTCAGTAATCGAGCCAAAATGTTTAACCTATTCAATGAACAGAACTTACCAAAGAAAAAAGATAGAAACCATACCATAATATGTTGAGAAGTTCCTAATCCTCTTGATGCCTTCGAGACCTTCAACAGTTCCTTTTCTATATCTTCCTATATTTCCAGTAAATGGTTAGATGCATCTACGATCCATAGTTCCTCAGAAATTATATGCATACAGACCTTAGTAAAGTATATAGGACAATAACGCTTGTTTTTCTTTTTCACGATCAGAAGGTCAGACTGTAAAAAGAAAAAGAAAATTGTTAATATGAGAAATGAACAGCATATAGGACGGGACATGTCAACCAAACAATACACAGAGATAGAGATACAATTACGGAAACTGTCAACCCAACTATAACCATGTGTTATGAATTATGCACACCGACAATCATGATTGAGAGCTGTTTGTGCTCTGCATTAGGAATTTGGGAAGTGTCCAATTTATGGGTCATTTTAGAGTTTTCACAATGCTGACTTTTTTCATTTAAGTTTGTGTTAAAACCATTTAACTAAGTGCAGTAACGTACCTGAAAAACAGGAACTCCGTCAAAACTGCTTCTGGTATCCGAAGCTTTAAGCTACAAATAAAACGATAAAATTACGAGTCAATTTTCAGGTCAACAGAAATACAGCATGTTCCCAATGTTTTTGATATTGTTTGTTAACTTTTTTGTTACAAGTCAAATGAAGGTAACATCTCAAATATCAAATTGAAATGTCAAGCTATCTTTCAAGATAGTCATGAGTACGTTCAACCCAGCAGGTATCCAACTAGATAATATACATATAATTAGTGCCACACGTTAATAGTGCGAATATCAAGCTTACACAATTTGGTTTGGTGGTAAAAAAAAAAAAAAAAGAACTACCAATCATAATATTTCCCGTATGTGACAACCACGAGATTTGAACTGATAGCTCCATAATCATTTTACCTTTTTTCAACTCTCCCCTCGACCACTAGGCTAACCTGTTGTAGTTGGCATCTAGCCAATATCTACCTAGCATCTCTTACAAGTATTGGTATTTCTACAAAATTTAAAATTTAGATACCAAAAGAAAGAATATAAAATATAGCATAGTATTGACACGAGCCTTTGTCTGAGGGCCAAGAGAATGACAAGATCAAATGAAACTTGCCTCTAACGCATTCTTTATCTGAACAGGATCTGGCAAAAAGCGGAATGCAATACCTTCTACTTTCAACATGTATACCTGTGAATCATTACAAATGAACAAAAACTACAAATAAATCTACTGAAGTACAGAAGTAAGACTGAAACTGAAGGAGGAAAACCTGGTAATTGACAATACACAATACATGGGAAAAAGAAAAATCAAATTGAATTCTCAATGAATTCTTTCTCACAAAAATATTGCATTTCAGACCCCGCCCTCCACCCCCCTAGAAAAGTAAAGAAAAGAAAAAAAAAGAAAAGTAAAATAAAGACTTCTCTTCTCACCATCAAATTCAAATTCCGTGTTTTAAAACTTCAACCTGTTTGTCTATTTATATGAAATCTCCCTTCCCAACACATTAAGAAACATTCAAATTAATAGGTGCCAAAGATGAAATTTTCACCAGCAAGATGACTAAAAATAAAACTGAGTTATCTCATCGGGTAAATGTTCCTCTCATTGTCTCATACCATTGATCAGGAGTACTAGTACAAACCTACAAATGCAGTTGCCTACCACCCACACTAACCTTCACTACAAATTCCACTACAGAAGGGGAAAAGTTTAGTACTCAAGAAGTAAAAATTTGATGATGCAAGCAAGGTACCTGGTCAAGCGTAATTGGGACAACCTTCGCATTACTTCTTAGTTCTCTTTTCCTTGATCGGACCTGAAATTCACTATAACAGATATCATATTGCAATATTAAGCATCAGAATTCTCAAGAATTATGGATACAACATCATATTTCAACAAAAGAATTAGAATGGTAAACTTACTTCAAATGCATAAAATTTCCAAATCATTAAACACAAATTCCACTAAATAAAAAAGAAACACAAATTTGATTTGGGACAAGTCTTCCTCACTTCTTCACGATCATTTCACTATTCACAGATGGGGAAAAGAAAACAGGTGCAAGACAAACCTGAGCCAAAAAGGTCTCGGCATCTTCCTTGCGGAAGCACAGCAACCCAATTGACTTGACACCATTGGGATCAGAAATGAGCACAAACTCGTTGTTTGAATTGCTAACAGTGTAGACTGCCGTGCCGACGAGGGACTTAGCCACTTGGTCGGAGCTAAGAGTGGCAGCCAAGGCATGAGTGTGCTGGGCAATGGACGCGAAAGGTGGGGTAGGAAATGATCGCCAATTAGCCTCCGGCGGCCATCTTCTGGCGAAAGTTCCGGCAAAGCGTTTGGTGTCGTCAAGACGATTGGAAAGCTCGGCTGCGAGTCTGGTACAGTGATGGTGGATGAAAGAAGAAACGGATAG

mRNA sequence

ATGGAGAGGCTATACACAAATAAAATCAAACTCGACACATCTGAGATATCCAGCCGCAATGTTTTCGCTAACCTCCTCGATGTAAAAGAGAAGGCATTAGATTCTCCAACATCTCAAAATAATTTGGTTGAATCAGTACTCTCCATGCTCCTTCCATTCTTCTTGTGTAGTCTGTTGGCTGAATCCACAGCCTATGTCATGCTTTGCCCACTTCTTGAATGTGTTGAGAGTGGCTTTTGCCAGATAGTGGCATATCTGACGGGCGAGATTACTTCTAAAATAAGTAAGACTGAAACTGAAGGAGGAAAACCTGGTGCCAAAGATGAAATTTTCACCAGCAAGATGACTAAAAATAAAACTGAGTTATCTCATCGGATGGGGAAAAGAAAACAGGTGCAAGACAAACCTGAGCCAAAAAGTGTAGACTGCCGTGCCGACGAGGGACTTAGCCACTTGGTCGGAGCTAAGAGTGGCAGCCAAGGCATGAGTGTGCTGGGCAATGGACGCGAAAGCCTCCGGCGGCCATCTTCTGGCGAAAGTTCCGGCAAAGCGTTTGGTGTCGTCAAGACGATTGGAAAGCTCGGCTGCGAGTCTGGTACAGTGATGGTGGATGAAAGAAGAAACGGATAG

Coding sequence (CDS)

ATGGAGAGGCTATACACAAATAAAATCAAACTCGACACATCTGAGATATCCAGCCGCAATGTTTTCGCTAACCTCCTCGATGTAAAAGAGAAGGCATTAGATTCTCCAACATCTCAAAATAATTTGGTTGAATCAGTACTCTCCATGCTCCTTCCATTCTTCTTGTGTAGTCTGTTGGCTGAATCCACAGCCTATGTCATGCTTTGCCCACTTCTTGAATGTGTTGAGAGTGGCTTTTGCCAGATAGTGGCATATCTGACGGGCGAGATTACTTCTAAAATAAGTAAGACTGAAACTGAAGGAGGAAAACCTGGTGCCAAAGATGAAATTTTCACCAGCAAGATGACTAAAAATAAAACTGAGTTATCTCATCGGATGGGGAAAAGAAAACAGGTGCAAGACAAACCTGAGCCAAAAAGTGTAGACTGCCGTGCCGACGAGGGACTTAGCCACTTGGTCGGAGCTAAGAGTGGCAGCCAAGGCATGAGTGTGCTGGGCAATGGACGCGAAAGCCTCCGGCGGCCATCTTCTGGCGAAAGTTCCGGCAAAGCGTTTGGTGTCGTCAAGACGATTGGAAAGCTCGGCTGCGAGTCTGGTACAGTGATGGTGGATGAAAGAAGAAACGGATAG

Protein sequence

MERLYTNKIKLDTSEISSRNVFANLLDVKEKALDSPTSQNNLVESVLSMLLPFFLCSLLAESTAYVMLCPLLECVESGFCQIVAYLTGEITSKISKTETEGGKPGAKDEIFTSKMTKNKTELSHRMGKRKQVQDKPEPKSVDCRADEGLSHLVGAKSGSQGMSVLGNGRESLRRPSSGESSGKAFGVVKTIGKLGCESGTVMVDERRNG
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..141

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC05G101960.1CcUC05G101960.1mRNA