CcUC05G100780 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC05G100780
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Description50S ribosomal protein L31
LocationCicolChr05: 29065005 .. 29066249 (-)
RNA-Seq ExpressionCcUC05G100780
SyntenyCcUC05G100780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAATGGAGTGAGTGAGTGGACACTCGACAAGGCCTTGAAGAAGATCTCATCTCCCTCTTATCCTTTACTCACCGCAACCAAACGCAGCAATGGCGCTGAACCTAACAAATTCCTTCCTTCAACTTCAACGGCCAATTTCCCCGGCCGTCGCACCGCCGAAGAACAAGGTACTTTCACCCTTCTCTTCACTCCTCAATTTTCCGAGACGGTGATTATTCATTTCTGTTTCCCCCAATTTTGGCGTAACTTCCAGGAATTTAGAGCGAGAAGTCACCGGCCGGTTGTAACCTGCCGGAAAAAGGATCTCCACCCCCAATTTTACGAGGATGCTAAGGTTTATTGCAACGGAGAACTGGTGATGACGACCGGTGGGACCCAGAAAGAGTATTCAGTGGATGTGTGGTCGGGAAATCACCCGTTCTATTTGGGCAGCCGATCCGCCTTGCTCGTCGACGCCGACCAGGTCGAGAAATTCCGCAAGAAATTCGGAGAGCTGTCGCAGTTGATGGAGATTCCTGTCCTTAAGGGGGAAATCGTTCTGCCCACAAAGCGCAAAGCCGGCAAAGGGAAGAAGAAGTAGAAGAGTGTGAAGATTTGAATTGGCTTGGTAATCAGTTAAAATCCAAATGCATATTGAGATTTTTGGTTCTTTCCATTGCATTATATATCTGTATAATTTAGCAGAATCGATACTAATTTGTCTGAACCAAACAATTTGCTTCTGTTAGTTGTATTGCCTTGCTAATTCTGAATGCTCAAAATGTTTTATGGGTATGAATGCACAATGGATAGGTGTTTGGTGGGTGAGAAAATTCACGAAGGAAAGGAAAATTTGAGAAATTAGAATAGGAATTGATGGTGATGGCAACTGACGATGCAAATTCTTCAAGATTTTGGGCAGTTTATTTGTGCAGGTGAATTGCTTGTTTTCGCAATTTGCTTCTATGAATCTTTAGCTTATGAGACGGTGGTATAGGAAACTTGCCTTCGGACTTCAGAGGATTTCCTAGTTTTAAAATTGGTTGAAATTTGAAATATCGTAAACTGACATGAAAAGAAGATGATGGCCACAACATAAGGAGGGTAGGGAAAGCATTTGATACTTAGTGGGAGTAACGATTTAATTCATGTAATTTCGATTTTGTAATAATTTAGGTAGTAAATATTTCGTATTTTGTTTTTTATTTTTGAAAATTAAGTTTTTTACTTTTTATTTTTTTTATATATTTTTTTAAAATTTTT

mRNA sequence

AAAAAATGGAGTGAGTGAGTGGACACTCGACAAGGCCTTGAAGAAGATCTCATCTCCCTCTTATCCTTTACTCACCGCAACCAAACGCAGCAATGGCGCTGAACCTAACAAATTCCTTCCTTCAACTTCAACGGCCAATTTCCCCGGCCGTCGCACCGCCGAAGAACAAGGAATTTAGAGCGAGAAGTCACCGGCCGGTTGTAACCTGCCGGAAAAAGGATCTCCACCCCCAATTTTACGAGGATGCTAAGGTTTATTGCAACGGAGAACTGGTGATGACGACCGGTGGGACCCAGAAAGAGTATTCAGTGGATGTGTGGTCGGGAAATCACCCGTTCTATTTGGGCAGCCGATCCGCCTTGCTCGTCGACGCCGACCAGGTCGAGAAATTCCGCAAGAAATTCGGAGAGCTGTCGCAGTTGATGGAGATTCCTGTCCTTAAGGGGGAAATCGTTCTGCCCACAAAGCGCAAAGCCGGCAAAGGGAAGAAGAAGTAGAAGAGTGTGAAGATTTGAATTGGCTTGGTAATCAGTTAAAATCCAAATGCATATTGAGATTTTTGGTTCTTTCCATTGCATTATATATCTGTATAATTTAGCAGAATCGATACTAATTTGTCTGAACCAAACAATTTGCTTCTGTTAGTTGTATTGCCTTGCTAATTCTGAATGCTCAAAATGTTTTATGGGTATGAATGCACAATGGATAGGTGTTTGGTGGGTGAGAAAATTCACGAAGGAAAGGAAAATTTGAGAAATTAGAATAGGAATTGATGGTGATGGCAACTGACGATGCAAATTCTTCAAGATTTTGGGCAGTTTATTTGTGCAGGTGAATTGCTTGTTTTCGCAATTTGCTTCTATGAATCTTTAGCTTATGAGACGGTGGTATAGGAAACTTGCCTTCGGACTTCAGAGGATTTCCTAGTTTTAAAATTGGTTGAAATTTGAAATATCGTAAACTGACATGAAAAGAAGATGATGGCCACAACATAAGGAGGGTAGGGAAAGCATTTGATACTTAGTGGGAGTAACGATTTAATTCATGTAATTTCGATTTTGTAATAATTTAGGTAGTAAATATTTCGTATTTTGTTTTTTATTTTTGAAAATTAAGTTTTTTACTTTTTATTTTTTTTATATATTTTTTTAAAATTTTT

Coding sequence (CDS)

ATGGCGCTGAACCTAACAAATTCCTTCCTTCAACTTCAACGGCCAATTTCCCCGGCCGTCGCACCGCCGAAGAACAAGGAATTTAGAGCGAGAAGTCACCGGCCGGTTGTAACCTGCCGGAAAAAGGATCTCCACCCCCAATTTTACGAGGATGCTAAGGTTTATTGCAACGGAGAACTGGTGATGACGACCGGTGGGACCCAGAAAGAGTATTCAGTGGATGTGTGGTCGGGAAATCACCCGTTCTATTTGGGCAGCCGATCCGCCTTGCTCGTCGACGCCGACCAGGTCGAGAAATTCCGCAAGAAATTCGGAGAGCTGTCGCAGTTGATGGAGATTCCTGTCCTTAAGGGGGAAATCGTTCTGCCCACAAAGCGCAAAGCCGGCAAAGGGAAGAAGAAGTAG

Protein sequence

MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVLPTKRKAGKGKKK
Homology
[Close]
BLAST of CcUC05G100780 vs. NCBI nr
Match: KAA0041569.1 (50S ribosomal protein L31 [Cucumis melo var. makuwa])

HSP 1 Score: 261.2 bits (666), Expect = 5.1e-66
Identity = 127/134 (94.78%), Postives = 131/134 (97.76%), Query Frame = 0 

Query: 1   MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL 60
           MALNLTNSFLQLQRPISPAVAPPK+KE  ARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL
Sbjct: 53  MALNLTNSFLQLQRPISPAVAPPKHKESGARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL 112

Query: 61  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 120
           VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI
Sbjct: 113 VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 172

Query: 121 VLPTKRKAGKGKKK 135
           +LP+KRK+ KGKKK
Sbjct: 173 ILPSKRKSAKGKKK 186

[Close]
BLAST of CcUC05G100780 vs. NCBI nr
Match: XP_008466538.1 (PREDICTED: 50S ribosomal protein L31, chloroplastic [Cucumis melo] >ADN34183.1 50S ribosomal protein l31 [Cucumis melo subsp. melo])

HSP 1 Score: 261.2 bits (666), Expect = 5.1e-66
Identity = 127/134 (94.78%), Postives = 131/134 (97.76%), Query Frame = 0 

Query: 1   MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL 60
           MALNLTNSFLQLQRPISPAVAPPK+KE  ARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL
Sbjct: 28  MALNLTNSFLQLQRPISPAVAPPKHKESGARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL 87

Query: 61  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 120
           VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI
Sbjct: 88  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 147

Query: 121 VLPTKRKAGKGKKK 135
           +LP+KRK+ KGKKK
Sbjct: 148 ILPSKRKSAKGKKK 161

[Close]
BLAST of CcUC05G100780 vs. NCBI nr
Match: XP_004147854.2 (50S ribosomal protein L31, chloroplastic [Cucumis sativus] >KGN59985.1 hypothetical protein Csa_001806 [Cucumis sativus])

HSP 1 Score: 258.5 bits (659), Expect = 3.3e-65
Identity = 126/134 (94.03%), Postives = 130/134 (97.01%), Query Frame = 0 

Query: 1   MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL 60
           MALNLTNSFLQLQRPISPAVAPPK KE  ARS+RPVVTCRKKDLHPQFYEDAKVYCNGEL
Sbjct: 1   MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGEL 60

Query: 61  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 120
           VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI
Sbjct: 61  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 120

Query: 121 VLPTKRKAGKGKKK 135
           +LP+KRK+ KGKKK
Sbjct: 121 ILPSKRKSAKGKKK 134

[Close]
BLAST of CcUC05G100780 vs. NCBI nr
Match: XP_038896266.1 (50S ribosomal protein L31, chloroplastic [Benincasa hispida] >XP_038896267.1 50S ribosomal protein L31, chloroplastic [Benincasa hispida])

HSP 1 Score: 257.7 bits (657), Expect = 5.6e-65
Identity = 126/134 (94.03%), Postives = 130/134 (97.01%), Query Frame = 0 

Query: 1   MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL 60
           MALNLTNSFLQLQRP S AVAPPKNKE  AR+HRPVVTCRKKDLHPQFYED+KVYCNGEL
Sbjct: 27  MALNLTNSFLQLQRPSSLAVAPPKNKESGARTHRPVVTCRKKDLHPQFYEDSKVYCNGEL 86

Query: 61  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 120
           VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI
Sbjct: 87  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 146

Query: 121 VLPTKRKAGKGKKK 135
           VLPTK+K+GKGKKK
Sbjct: 147 VLPTKKKSGKGKKK 160

[Close]
BLAST of CcUC05G100780 vs. NCBI nr
Match: XP_022936208.1 (50S ribosomal protein L31, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 248.4 bits (633), Expect = 3.4e-62
Identity = 126/135 (93.33%), Postives = 128/135 (94.81%), Query Frame = 0 

Query: 1   MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL 60
           MALNLTNSF  LQRPISP VAPPK KEF ARSHR VVTCRKKDLHPQF+EDAKVYCNGEL
Sbjct: 1   MALNLTNSF--LQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGEL 60

Query: 61  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 120
           VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI
Sbjct: 61  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 120

Query: 121 VLPTKRKA-GKGKKK 135
           VLPTKRK+ GKGKKK
Sbjct: 121 VLPTKRKSGGKGKKK 133

[Close]
BLAST of CcUC05G100780 vs. ExPASy Swiss-Prot
Match: Q9FWS4 (50S ribosomal protein L31, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.6e-46
Identity = 94/144 (65.28%), Postives = 114/144 (79.17%), Query Frame = 0 

Query: 1   MALNLTNSF---------LQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYED 60
           MA++L NSF         LQL++P+  AV   K    R+ +    +TCRKK+LHP+F+ED
Sbjct: 1   MAVSLPNSFLQISPCVPSLQLRKPVMAAVKGGKQSVRRSSNTVVQITCRKKELHPEFHED 60

Query: 61  AKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLM 120
           AKVYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSAL+VDADQVEKFRK+F  LS++M
Sbjct: 61  AKVYCNGELVMTTGGTKKEYVVDVWSGNHPFYLGNRSALMVDADQVEKFRKRFAGLSEIM 120

Query: 121 EIPVLKGEIVLPTKRKAG-KGKKK 135
           EIPVLKGEI++PTK+  G KGKKK
Sbjct: 121 EIPVLKGEIIMPTKKSKGPKGKKK 144

[Close]
BLAST of CcUC05G100780 vs. ExPASy Swiss-Prot
Match: P82249 (50S ribosomal protein L31, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL31 PE=1 SV=2)

HSP 1 Score: 176.8 bits (447), Expect = 1.6e-43
Identity = 88/134 (65.67%), Postives = 106/134 (79.10%), Query Frame = 0 

Query: 1   MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL 60
           M L L+N FL         +  PK     + + RP  +CRK D+HP+F EDAKVYCNGEL
Sbjct: 1   MVLTLSNQFLAKIPATPKTLTLPKTS---SSTLRPQWSCRKSDIHPEFREDAKVYCNGEL 60

Query: 61  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 120
           VMTTGGTQK+Y+V+VWSGNHPFYLG+RSALL+DADQVEKFRKK+GEL+Q+MEIPVLKGEI
Sbjct: 61  VMTTGGTQKDYTVEVWSGNHPFYLGNRSALLLDADQVEKFRKKYGELTQIMEIPVLKGEI 120

Query: 121 VLPTKRKAGKGKKK 135
           +LP K+K+ K KKK
Sbjct: 121 ILPPKKKS-KAKKK 130

[Close]
BLAST of CcUC05G100780 vs. ExPASy Swiss-Prot
Match: Q110D6 (50S ribosomal protein L31 OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=rpmE PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.6e-17
Identity = 45/94 (47.87%), Postives = 62/94 (65.96%), Query Frame = 0 

Query: 41  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEK 100
           K D+HP++Y +AKVYCNGE+VMT G TQ E  VDVWSGNHP++ G++   ++D + +VE+
Sbjct: 3   KADIHPEWYPEAKVYCNGEVVMTVGSTQPEIHVDVWSGNHPYFTGTQK--IIDTEGRVER 62

Query: 101 FRKKFGELSQLMEIPVLKGEIVLPTKRKAGKGKK 134
           F +K+ +     E    K      TK K GKGKK
Sbjct: 63  FMRKYSK----QEGSGSKSNKSKSTKSKKGKGKK 90

[Close]
BLAST of CcUC05G100780 vs. ExPASy Swiss-Prot
Match: Q7V9Y9 (50S ribosomal protein L31 OS=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) OX=167539 GN=rpmE PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.5e-17
Identity = 38/65 (58.46%), Postives = 50/65 (76.92%), Query Frame = 0 

Query: 41  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF 100
           KKD+HP +Y DAKV CNGE+VMTTG TQ E  VDVWSGNHPF+ G++  L  +  +V++F
Sbjct: 3   KKDIHPNWYPDAKVICNGEVVMTTGSTQPEIHVDVWSGNHPFFTGTQKILDTEG-RVDRF 62

Query: 101 RKKFG 106
            +K+G
Sbjct: 63  MRKYG 66

[Close]
BLAST of CcUC05G100780 vs. ExPASy Swiss-Prot
Match: Q31L35 (50S ribosomal protein L31 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=rpmE PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.5e-17
Identity = 40/68 (58.82%), Postives = 52/68 (76.47%), Query Frame = 0 

Query: 41  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEK 100
           K D+HPQ+Y +AKVYCNGE VMT G TQ E  VDVWSGNHPFY G++   ++D + +VE+
Sbjct: 3   KADIHPQWYPEAKVYCNGEEVMTVGSTQPELHVDVWSGNHPFYTGTQK--IIDTEGRVER 62

Query: 101 FRKKFGEL 108
           F +K+G L
Sbjct: 63  FLRKYGML 68

[Close]
BLAST of CcUC05G100780 vs. ExPASy TrEMBL
Match: A0A5A7TJN6 (50S ribosomal protein L31, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G00310 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.5e-66
Identity = 127/134 (94.78%), Postives = 131/134 (97.76%), Query Frame = 0 

Query: 1   MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL 60
           MALNLTNSFLQLQRPISPAVAPPK+KE  ARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL
Sbjct: 53  MALNLTNSFLQLQRPISPAVAPPKHKESGARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL 112

Query: 61  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 120
           VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI
Sbjct: 113 VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 172

Query: 121 VLPTKRKAGKGKKK 135
           +LP+KRK+ KGKKK
Sbjct: 173 ILPSKRKSAKGKKK 186

[Close]
BLAST of CcUC05G100780 vs. ExPASy TrEMBL
Match: E5GCI4 (50S ribosomal protein L31, chloroplastic OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.5e-66
Identity = 127/134 (94.78%), Postives = 131/134 (97.76%), Query Frame = 0 

Query: 1   MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL 60
           MALNLTNSFLQLQRPISPAVAPPK+KE  ARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL
Sbjct: 28  MALNLTNSFLQLQRPISPAVAPPKHKESGARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL 87

Query: 61  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 120
           VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI
Sbjct: 88  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 147

Query: 121 VLPTKRKAGKGKKK 135
           +LP+KRK+ KGKKK
Sbjct: 148 ILPSKRKSAKGKKK 161

[Close]
BLAST of CcUC05G100780 vs. ExPASy TrEMBL
Match: A0A1S3CRJ2 (50S ribosomal protein L31, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503925 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.5e-66
Identity = 127/134 (94.78%), Postives = 131/134 (97.76%), Query Frame = 0 

Query: 1   MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL 60
           MALNLTNSFLQLQRPISPAVAPPK+KE  ARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL
Sbjct: 28  MALNLTNSFLQLQRPISPAVAPPKHKESGARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL 87

Query: 61  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 120
           VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI
Sbjct: 88  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 147

Query: 121 VLPTKRKAGKGKKK 135
           +LP+KRK+ KGKKK
Sbjct: 148 ILPSKRKSAKGKKK 161

[Close]
BLAST of CcUC05G100780 vs. ExPASy TrEMBL
Match: A0A0A0LDC9 (50S ribosomal protein L31 OS=Cucumis sativus OX=3659 GN=Csa_3G859720 PE=3 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.6e-65
Identity = 126/134 (94.03%), Postives = 130/134 (97.01%), Query Frame = 0 

Query: 1   MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL 60
           MALNLTNSFLQLQRPISPAVAPPK KE  ARS+RPVVTCRKKDLHPQFYEDAKVYCNGEL
Sbjct: 1   MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGEL 60

Query: 61  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 120
           VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI
Sbjct: 61  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 120

Query: 121 VLPTKRKAGKGKKK 135
           +LP+KRK+ KGKKK
Sbjct: 121 ILPSKRKSAKGKKK 134

[Close]
BLAST of CcUC05G100780 vs. ExPASy TrEMBL
Match: A0A6J1FCM8 (50S ribosomal protein L31 OS=Cucurbita moschata OX=3662 GN=LOC111442881 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.6e-62
Identity = 126/135 (93.33%), Postives = 128/135 (94.81%), Query Frame = 0 

Query: 1   MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL 60
           MALNLTNSF  LQRPISP VAPPK KEF ARSHR VVTCRKKDLHPQF+EDAKVYCNGEL
Sbjct: 1   MALNLTNSF--LQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGEL 60

Query: 61  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 120
           VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI
Sbjct: 61  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 120

Query: 121 VLPTKRKA-GKGKKK 135
           VLPTKRK+ GKGKKK
Sbjct: 121 VLPTKRKSGGKGKKK 133

[Close]
BLAST of CcUC05G100780 vs. TAIR 10
Match: AT1G75350.1 (Ribosomal protein L31 )

HSP 1 Score: 186.8 bits (473), Expect = 1.1e-47
Identity = 94/144 (65.28%), Postives = 114/144 (79.17%), Query Frame = 0 

Query: 1   MALNLTNSF---------LQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFYED 60
           MA++L NSF         LQL++P+  AV   K    R+ +    +TCRKK+LHP+F+ED
Sbjct: 1   MAVSLPNSFLQISPCVPSLQLRKPVMAAVKGGKQSVRRSSNTVVQITCRKKELHPEFHED 60

Query: 61  AKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLM 120
           AKVYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSAL+VDADQVEKFRK+F  LS++M
Sbjct: 61  AKVYCNGELVMTTGGTKKEYVVDVWSGNHPFYLGNRSALMVDADQVEKFRKRFAGLSEIM 120

Query: 121 EIPVLKGEIVLPTKRKAG-KGKKK 135
           EIPVLKGEI++PTK+  G KGKKK
Sbjct: 121 EIPVLKGEIIMPTKKSKGPKGKKK 144

The following BLAST results are available for this feature:
BLAST of CcUC05G100780 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0041569.15.1e-6694.7850S ribosomal protein L31 [Cucumis melo var. makuwa][more]
XP_008466538.15.1e-6694.78PREDICTED: 50S ribosomal protein L31, chloroplastic [Cucumis melo] >ADN34183.1 5... [more]
XP_004147854.23.3e-6594.0350S ribosomal protein L31, chloroplastic [Cucumis sativus] >KGN59985.1 hypotheti... [more]
XP_038896266.15.6e-6594.0350S ribosomal protein L31, chloroplastic [Benincasa hispida] >XP_038896267.1 50S... [more]
XP_022936208.13.4e-6293.3350S ribosomal protein L31, chloroplastic-like [Cucurbita moschata][more]
BLAST of CcUC05G100780 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FWS41.6e-4665.2850S ribosomal protein L31, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL3... [more]
P822491.6e-4365.6750S ribosomal protein L31, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL31 P... [more]
Q110D62.6e-1747.8750S ribosomal protein L31 OS=Trichodesmium erythraeum (strain IMS101) OX=203124 ... [more]
Q7V9Y93.5e-1758.4650S ribosomal protein L31 OS=Prochlorococcus marinus (strain SARG / CCMP1375 / S... [more]
Q31L353.5e-1758.8250S ribosomal protein L31 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-80... [more]
BLAST of CcUC05G100780 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TJN62.5e-6694.7850S ribosomal protein L31, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 ... [more]
E5GCI42.5e-6694.7850S ribosomal protein L31, chloroplastic OS=Cucumis melo subsp. melo OX=412675 P... [more]
A0A1S3CRJ22.5e-6694.7850S ribosomal protein L31, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503925... [more]
A0A0A0LDC91.6e-6594.0350S ribosomal protein L31 OS=Cucumis sativus OX=3659 GN=Csa_3G859720 PE=3 SV=1[more]
A0A6J1FCM81.6e-6293.3350S ribosomal protein L31 OS=Cucurbita moschata OX=3662 GN=LOC111442881 PE=3 SV=... [more]
BLAST of CcUC05G100780 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G75350.11.1e-4765.28Ribosomal protein L31 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002150Ribosomal protein L31PRINTSPR01249RIBOSOMALL31coord: 70..85
score: 49.69
coord: 41..58
score: 33.33
IPR002150Ribosomal protein L31PFAMPF01197Ribosomal_L31coord: 41..105
e-value: 7.3E-17
score: 61.3
IPR002150Ribosomal protein L31TIGRFAMTIGR00105TIGR00105coord: 41..106
e-value: 3.2E-15
score: 54.0
IPR002150Ribosomal protein L31PANTHERPTHR3328050S RIBOSOMAL PROTEIN L31, CHLOROPLASTICcoord: 1..134
IPR042105Ribosomal protein L31 superfamilyGENE3D4.10.830.30Ribosomal protein L31coord: 41..108
e-value: 2.3E-17
score: 64.9
NoneNo IPR availablePANTHERPTHR33280:SF550S RIBOSOMAL PROTEIN L31coord: 1..134
IPR034704L28p-likeSUPERFAMILY143800L28p-likecoord: 41..107

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC05G100780.1CcUC05G100780.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome