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CcUC05G100560 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCAGCCACACTGACCTCAGTTGTTCTTCGCTATATATTCTTTGGTGTAATTTTGTTTACTATAACAACAGTGATATCTGAAACCGTTGTACCTTTGACAACTTATGGCAACTATGAATCTCAAGCGAAGGGAGATGATGGTCGCTTGAAGGTCGAGTCAGCAGAAATTGTTGCAGACTACGGCTACTGGAATCCAAACCCCATGTTTGGGGGAGGAAAAGCAGGCCCCATTCACCATTAA ATGGCAGCAGCCACACTGACCTCAGTTGTTCTTCGCTATATATTCTTTGGTGTAATTTTGTTTACTATAACAACAGTGATATCTGAAACCGTTGTACCTTTGACAACTTATGGCAACTATGAATCTCAAGCGAAGGGAGATGATGGTCGCTTGAAGGTCGAGTCAGCAGAAATTGTTGCAGACTACGGCTACTGGAATCCAAACCCCATGTTTGGGGGAGGAAAAGCAGGCCCCATTCACCATTAA ATGGCAGCAGCCACACTGACCTCAGTTGTTCTTCGCTATATATTCTTTGGTGTAATTTTGTTTACTATAACAACAGTGATATCTGAAACCGTTGTACCTTTGACAACTTATGGCAACTATGAATCTCAAGCGAAGGGAGATGATGGTCGCTTGAAGGTCGAGTCAGCAGAAATTGTTGCAGACTACGGCTACTGGAATCCAAACCCCATGTTTGGGGGAGGAAAAGCAGGCCCCATTCACCATTAA MAAATLTSVVLRYIFFGVILFTITTVISETVVPLTTYGNYESQAKGDDGRLKVESAEIVADYGYWNPNPMFGGGKAGPIHH Homology
BLAST of CcUC05G100560 vs. NCBI nr
Match: KAG6608573.1 (hypothetical protein SDJN03_01915, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 76.6 bits (187), Expect = 1.1e-10 Identity = 49/93 (52.69%), Postives = 57/93 (61.29%), Query Frame = 0
BLAST of CcUC05G100560 vs. NCBI nr
Match: KGN55706.1 (hypothetical protein Csa_010844 [Cucumis sativus]) HSP 1 Score: 75.9 bits (185), Expect = 1.8e-10 Identity = 39/63 (61.90%), Postives = 47/63 (74.60%), Query Frame = 0
BLAST of CcUC05G100560 vs. ExPASy TrEMBL
Match: A0A0A0L6C3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G006675 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 8.8e-11 Identity = 39/63 (61.90%), Postives = 47/63 (74.60%), Query Frame = 0
BLAST of CcUC05G100560 vs. TAIR 10
Match: AT1G28375.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 8 Blast hits to 8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 41.2 bits (95), Expect = 4.6e-04 Identity = 23/70 (32.86%), Postives = 38/70 (54.29%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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