CcUC05G100470 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC05G100470
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionATP synthase subunit e, mitochondrial
LocationCicolChr05: 28772939 .. 28775064 (-)
RNA-Seq ExpressionCcUC05G100470
SyntenyCcUC05G100470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACCCCCTCCTGGCCCTTACTCCGGCACCAGCACCCTCGCTCTGGTATTTCCCCTTTCTTTTCCCTCTAAATTTTAATCATCTGCGGAACTACTTTCTCTTATGTTTCCGTTTTTTATTTAGCTCGATCCTTGTGATATCCCGTATCCACTTTTTTTTTTCCTCTCTAGGCTTTAGAGTAGTACTTCAATGCATCTAGATTTATCCGATCAAAATTTTTTATTTTATTTTATTTTTCGAATTTCTTCATTATATTATTTTTAAATCCTGACTTAAAAATCAAATGGATCGGTTCGTTTTAGGTTCTGAATTTTTTTCTCTCCTTTAATGTCCTAATATTTTGGGTATTGATTTCTACAGGTAGCCCGTGCATCAGCATTCACCTTTGGTTTGGTTTACGGAAGCATTAAGCTCAAAGTTCTGAAGGTAAATTGGAATCAACTGCTGTCCAACCGTTGTTGTTATAGTAATACATTCATTGAAATTTGAAATGTATTTTCGTTGGACATGGGTTTGGTTGTATGGCGCCTCTGTTTACATTAACTCCATGTTTATTAATGGTGTGACCATTTCACTCGTTCATTCACATGAATTCAACATTAAAACTAAATTTTGACTTGTTTTCTTTCAGAGACGAGATTTCTTCATTGTCCTATTTTTATCTGCATTTCTAATTTAAGGAAGAAATTTTTAGGAACCAAGTATGGGCTACCTTTGTCCTATATTTGTTAGAATGGGATTACCAGTGTGGTACTTAAGTGGGTTGGCTCTCCCACCTCAATAGCTAGCTTTGGGGGTTTGTAGTTCTCTAAGGTGCTTAAGTACCTAAAAACGGTATCAGAGTCGGTTGTTGACGTTCCAAAGTGGAACCCGCATAAGGTTCTAACTGGGTGTGACCATGTGAAGTACCGTCAGAATAGCTGTCGGGACATCGGCTTTTCGGAGATGGGGGTTAGGAACCAAGGTAGTATGGACTACCTTTGTTCATTGGTTAGCATGGGATGACCAATGTGGTACTTAAGTGGCGTGGCTCTCTCACCTCAATAGCTAGCTTGGGTGTTGTTCTCTAAGGTACTTAAGTCCCTAATAGAAATCTTTTTGGAGACTTAAAAGTTTACATTTTGTGCCTCTTTATTGTCTCAAGCACCGACATACTAATAATAATAAGAGGAAATTGTTTATATCTATTCAGAGGCATTTAGATGAGACATTTTTACTGATAACAGAGTTTCTTCAGGTTACGTCGACTTCCATGCAATGTTATTTGTCTTTCGGATTAAATATGTGAAAAATCACAGAAAGCACATGAAACATAGACCGCCTCGTGTATCTTGATTAGTGAATTGTATAGAACATGAATCTAAAATATGAATCTGGTTGTGTAATAACGTATCTTTTGGTTGTATTTTTCTGCACTTGCCAGGTAAAGGCCAAGTCACATGCGAAAGCTGAAGCCAAGGCCCATCATTGATAAACACATTTACTGATGTAGCTTGTAGCGATGGAAGAGATGGTAATTACCACATAGGGACAGACAGACTCTGATCATTGGTTGGAGAAATGTGATTTTTGGCTTCATAATTTAGTAGATTCCGTTCTTTTACTGCTGAAACAAAAGAAAATTTCTTTGTTTAGACGAGATTGGTATTGCGAATACTGTATGGTGTATGCTTAGTTTTTCAGTTCCAGTTGGCAATTCTGCCTGAGAATGTTCTTGAAATAAAGGTGATACACCATCCTGAAAAATAAGACTCCTTTGAGATTTTTGTCCATCACGAAACCACTGTCGTTTGACTTTAGAGTTTCAACTTATGATTGGCTTTCATCTTTCCGACCCATGGTTCAATTTATAGGGTCGTATTCTAAGAAAGGGATATAAATAAGAACCTTCGCTGGTGATGTTCACAGGTTCTCAAAAATAGAAATTTGGCTTAGAAGAAACTCGTATGCAGATACGGTAGAGGTAACTTAGATGAAAGGAGTAGTCTTTAGATTTGTCTTTTTTAGGCATGTTTTGTCTCCCCTTACAGAACCAAGGTATTGTTTTTGGGTTAGTGCAAATGAAAGTTAGCCAAATTAGGATAATCCTGATGGTTGGCTTCCGTTCAATTCCTAATCTCTGA

mRNA sequence

ATGGCACCCCCTCCTGGCCCTTACTCCGGCACCAGCACCCTCGCTCTGGTAGCCCGTGCATCAGCATTCACCTTTGGTTTGGTTTACGGAAGCATTAAGCTCAAAGTTCTGAAGATTAAATATGTGAAAAATCACAGAAAGCACATGAAACATAGACCGCCTCGTTTCCAGTTGGCAATTCTGCCTGAGAATGTTCTTGAAATAAAGAACCAAGGTATTGTTTTTGGGTTAGTGCAAATGAAAGTTAGCCAAATTAGGATAATCCTGATGGTTGGCTTCCGTTCAATTCCTAATCTCTGA

Coding sequence (CDS)

ATGGCACCCCCTCCTGGCCCTTACTCCGGCACCAGCACCCTCGCTCTGGTAGCCCGTGCATCAGCATTCACCTTTGGTTTGGTTTACGGAAGCATTAAGCTCAAAGTTCTGAAGATTAAATATGTGAAAAATCACAGAAAGCACATGAAACATAGACCGCCTCGTTTCCAGTTGGCAATTCTGCCTGAGAATGTTCTTGAAATAAAGAACCAAGGTATTGTTTTTGGGTTAGTGCAAATGAAAGTTAGCCAAATTAGGATAATCCTGATGGTTGGCTTCCGTTCAATTCCTAATCTCTGA

Protein sequence

MAPPPGPYSGTSTLALVARASAFTFGLVYGSIKLKVLKIKYVKNHRKHMKHRPPRFQLAILPENVLEIKNQGIVFGLVQMKVSQIRIILMVGFRSIPNL
Homology
[Close]
BLAST of CcUC05G100470 vs. NCBI nr
Match: XP_020420573.1 (uncharacterized protein LOC109949443 [Prunus persica] >ONI32450.1 hypothetical protein PRUPE_1G368600 [Prunus persica] >BBG94845.1 hypothetical protein Prudu_003225 [Prunus dulcis] >CAB4265604.1 unnamed protein product [Prunus armeniaca] >CAB4296197.1 unnamed protein product [Prunus armeniaca])

HSP 1 Score: 78.6 bits (192), Expect = 3.4e-11
Identity = 40/47 (85.11%), Postives = 45/47 (95.74%), Query Frame = 0 

Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGSIKLKVLKIKYVKNHRK 48
          MAPPPGPYSGTSTLALVARASAFTFGLVYGS+KL+VLK+K  K+H+K
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGSVKLRVLKMK-AKSHKK 46

[Close]
BLAST of CcUC05G100470 vs. NCBI nr
Match: XP_021692694.1 (uncharacterized protein LOC110673801 [Hevea brasiliensis])

HSP 1 Score: 77.8 bits (190), Expect = 5.9e-11
Identity = 39/47 (82.98%), Postives = 45/47 (95.74%), Query Frame = 0 

Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGSIKLKVLKIKYVKNHRK 48
          MAPPPGPYSGTSTLALVARASAF+FGLVYGS+KLK+LK+K  K+H+K
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSFGLVYGSVKLKILKMK-AKSHKK 46

[Close]
BLAST of CcUC05G100470 vs. NCBI nr
Match: XP_034206734.1 (uncharacterized protein LOC117620689 [Prunus dulcis] >VVA22453.1 PREDICTED: ATP synthase E chain [Prunus dulcis])

HSP 1 Score: 77.4 bits (189), Expect = 7.7e-11
Identity = 39/47 (82.98%), Postives = 45/47 (95.74%), Query Frame = 0 

Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGSIKLKVLKIKYVKNHRK 48
          MAPPPGPY+GTSTLALVARASAFTFGLVYGS+KL+VLK+K  K+H+K
Sbjct: 1  MAPPPGPYAGTSTLALVARASAFTFGLVYGSVKLRVLKMK-AKSHKK 46

[Close]
BLAST of CcUC05G100470 vs. NCBI nr
Match: XP_022132454.1 (uncharacterized protein LOC111005275 [Momordica charantia])

HSP 1 Score: 77.0 bits (188), Expect = 1.0e-10
Identity = 41/47 (87.23%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGSIKLKVLKIKYVKNHRK 48
          MAPPPGPYSGTSTLALVARASAFTFG+VYGSIKLKVLK K  K+H K
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFTFGVVYGSIKLKVLKAK-AKSHAK 46

[Close]
BLAST of CcUC05G100470 vs. NCBI nr
Match: KAG2689214.1 (hypothetical protein I3760_09G129700 [Carya illinoinensis] >KAG6642297.1 hypothetical protein CIPAW_09G132900 [Carya illinoinensis] >KAG6696106.1 hypothetical protein I3842_09G130800 [Carya illinoinensis] >KAG7963641.1 hypothetical protein I3843_09G128500 [Carya illinoinensis])

HSP 1 Score: 76.6 bits (187), Expect = 1.3e-10
Identity = 39/47 (82.98%), Postives = 44/47 (93.62%), Query Frame = 0 

Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGSIKLKVLKIKYVKNHRK 48
          MAPPPGPYSGTSTLALVARASAFTFG+VYGS+KLK+LK K  K+H+K
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFTFGVVYGSLKLKILKAK-AKSHQK 46

[Close]
BLAST of CcUC05G100470 vs. ExPASy TrEMBL
Match: A0A6J5W8M8 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS7758 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.7e-11
Identity = 40/47 (85.11%), Postives = 45/47 (95.74%), Query Frame = 0 

Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGSIKLKVLKIKYVKNHRK 48
          MAPPPGPYSGTSTLALVARASAFTFGLVYGS+KL+VLK+K  K+H+K
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGSVKLRVLKMK-AKSHKK 46

[Close]
BLAST of CcUC05G100470 vs. ExPASy TrEMBL
Match: A0A4Y1QSJ2 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_003225 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.7e-11
Identity = 40/47 (85.11%), Postives = 45/47 (95.74%), Query Frame = 0 

Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGSIKLKVLKIKYVKNHRK 48
          MAPPPGPYSGTSTLALVARASAFTFGLVYGS+KL+VLK+K  K+H+K
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGSVKLRVLKMK-AKSHKK 46

[Close]
BLAST of CcUC05G100470 vs. ExPASy TrEMBL
Match: A0A251R9Q6 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G368600 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.7e-11
Identity = 40/47 (85.11%), Postives = 45/47 (95.74%), Query Frame = 0 

Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGSIKLKVLKIKYVKNHRK 48
          MAPPPGPYSGTSTLALVARASAFTFGLVYGS+KL+VLK+K  K+H+K
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGSVKLRVLKMK-AKSHKK 46

[Close]
BLAST of CcUC05G100470 vs. ExPASy TrEMBL
Match: A0A5E4F3A3 (PREDICTED: ATP synthase E chain OS=Prunus dulcis OX=3755 GN=ALMOND_2B014238 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.7e-11
Identity = 39/47 (82.98%), Postives = 45/47 (95.74%), Query Frame = 0 

Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGSIKLKVLKIKYVKNHRK 48
          MAPPPGPY+GTSTLALVARASAFTFGLVYGS+KL+VLK+K  K+H+K
Sbjct: 1  MAPPPGPYAGTSTLALVARASAFTFGLVYGSVKLRVLKMK-AKSHKK 46

[Close]
BLAST of CcUC05G100470 vs. ExPASy TrEMBL
Match: A0A6J1BT37 (ATP synthase subunit e, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111005275 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 4.8e-11
Identity = 41/47 (87.23%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGSIKLKVLKIKYVKNHRK 48
          MAPPPGPYSGTSTLALVARASAFTFG+VYGSIKLKVLK K  K+H K
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFTFGVVYGSIKLKVLKAK-AKSHAK 46

[Close]
BLAST of CcUC05G100470 vs. TAIR 10
Match: AT3G01130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 1.6e-11
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 0 

Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGSIKLKVLKIK 41
          MAPPPG YSGTSTLALVARASAF  GL+YG+IKLK LKIK
Sbjct: 1  MAPPPGLYSGTSTLALVARASAFGLGLIYGNIKLKALKIK 40

[Close]
BLAST of CcUC05G100470 vs. TAIR 10
Match: AT3G01130.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 4.8e-11
Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = 0 

Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGSIKLKVLKIKY 42
          MAPPPG YSGTSTLALVARASAF  GL+YG+IKLK LK K+
Sbjct: 1  MAPPPGLYSGTSTLALVARASAFGLGLIYGNIKLKALKHKF 41

[Close]
BLAST of CcUC05G100470 vs. TAIR 10
Match: AT5G15320.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.1 bits (144), Expect = 1.2e-09
Identity = 32/40 (80.00%), Postives = 35/40 (87.50%), Query Frame = 0 

Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGSIKLKVLKIK 41
          M  PPG YSGTS+LALVARASAF  GLVYG++KLKVLKIK
Sbjct: 1  MTLPPGLYSGTSSLALVARASAFGLGLVYGNMKLKVLKIK 40

[Close]
BLAST of CcUC05G100470 vs. TAIR 10
Match: AT5G15320.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 1.4e-07
Identity = 28/43 (65.12%), Postives = 33/43 (76.74%), Query Frame = 0 

Query: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGSIKLKVLKIKYVK 44
          M  PPG YSGTS+LALVARASAF  GLVYG++KLK+  +   K
Sbjct: 1  MTLPPGLYSGTSSLALVARASAFGLGLVYGNMKLKIKSMSQKK 43

The following BLAST results are available for this feature:
BLAST of CcUC05G100470 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_020420573.13.4e-1185.11uncharacterized protein LOC109949443 [Prunus persica] >ONI32450.1 hypothetical p... [more]
XP_021692694.15.9e-1182.98uncharacterized protein LOC110673801 [Hevea brasiliensis][more]
XP_034206734.17.7e-1182.98uncharacterized protein LOC117620689 [Prunus dulcis] >VVA22453.1 PREDICTED: ATP ... [more]
XP_022132454.11.0e-1087.23uncharacterized protein LOC111005275 [Momordica charantia][more]
KAG2689214.11.3e-1082.98hypothetical protein I3760_09G129700 [Carya illinoinensis] >KAG6642297.1 hypothe... [more]
BLAST of CcUC05G100470 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CcUC05G100470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J5W8M81.7e-1185.11Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS7758 PE=4 SV... [more]
A0A4Y1QSJ21.7e-1185.11Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_003225 PE=4 SV=1[more]
A0A251R9Q61.7e-1185.11Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G368600 PE=4 SV=1[more]
A0A5E4F3A33.7e-1182.98PREDICTED: ATP synthase E chain OS=Prunus dulcis OX=3755 GN=ALMOND_2B014238 PE=4... [more]
A0A6J1BT374.8e-1187.23ATP synthase subunit e, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11100... [more]
BLAST of CcUC05G100470 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G01130.11.6e-1185.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G01130.24.8e-1180.49unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G15320.11.2e-0980.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G15320.21.4e-0765.12unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36028:SF5SUBFAMILY NOT NAMEDcoord: 1..53
NoneNo IPR availablePANTHERPTHR36028OSJNBB0050O03.8 PROTEINcoord: 1..53

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC05G100470.1CcUC05G100470.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function GO:0015078 proton transmembrane transporter activity