CcUC05G099490 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACTACAAAGAATTTCTGATGGATGGGTATTCCAGTAAACGAGTTCATATGGGAATTGTTTCTAGGAAGGGACTTGGTGTAGTTTTGAGGGATAACATGAAGCACCGGGATCAAAGTAATCAATACGATAACCGACTTGGCTGCACTGGCAGGATATGCTCCAGTAGTGGTGCACAAGTTCGCTGTTCAAATAAATCCAGCTCAAAAAGACCATTCCGCAGCTCAATTGGTAAAGAAGTTGTTGGAAGTTCCTCAAGTAGTTCCTCTGCAATCAGAAATCTCAGGAATTCTTTTCCATGGGCTTTTGGAAAGCTATCATCTAAGTTTACAGATTCATCTGAAAATAATAGCATTCATGATGAGTTGGAAGAACTGGAATTCATCTCACCTCCTGGATTGCTCCATACGTTCATGTAA ATGGACTACAAAGAATTTCTGATGGATGGGTATTCCAGTAAACGAGTTCATATGGGAATTGTTTCTAGGAAGGGACTTGGTGTAGTTTTGAGGGATAACATGAAGCACCGGGATCAAAGTAATCAATACGATAACCGACTTGGCTGCACTGGCAGGATATGCTCCAGTAGTGGTGCACAAGTTCGCTGTTCAAATAAATCCAGCTCAAAAAGACCATTCCGCAGCTCAATTGGTAAAGAAGTTGTTGGAAGTTCCTCAAGTAGTTCCTCTGCAATCAGAAATCTCAGGAATTCTTTTCCATGGGCTTTTGGAAAGCTATCATCTAAGTTTACAGATTCATCTGAAAATAATAGCATTCATGATGAGTTGGAAGAACTGGAATTCATCTCACCTCCTGGATTGCTCCATACGTTCATGTAA ATGGACTACAAAGAATTTCTGATGGATGGGTATTCCAGTAAACGAGTTCATATGGGAATTGTTTCTAGGAAGGGACTTGGTGTAGTTTTGAGGGATAACATGAAGCACCGGGATCAAAGTAATCAATACGATAACCGACTTGGCTGCACTGGCAGGATATGCTCCAGTAGTGGTGCACAAGTTCGCTGTTCAAATAAATCCAGCTCAAAAAGACCATTCCGCAGCTCAATTGGTAAAGAAGTTGTTGGAAGTTCCTCAAGTAGTTCCTCTGCAATCAGAAATCTCAGGAATTCTTTTCCATGGGCTTTTGGAAAGCTATCATCTAAGTTTACAGATTCATCTGAAAATAATAGCATTCATGATGAGTTGGAAGAACTGGAATTCATCTCACCTCCTGGATTGCTCCATACGTTCATGTAA MDYKEFLMDGYSSKRVHMGIVSRKGLGVVLRDNMKHRDQSNQYDNRLGCTGRICSSSGAQVRCSNKSSSKRPFRSSIGKEVVGSSSSSSSAIRNLRNSFPWAFGKLSSKFTDSSENNSIHDELEELEFISPPGLLHTFM Homology
BLAST of CcUC05G099490 vs. NCBI nr
Match: XP_038898034.1 (uncharacterized protein LOC120085870 [Benincasa hispida] >XP_038898035.1 uncharacterized protein LOC120085870 [Benincasa hispida] >XP_038898036.1 uncharacterized protein LOC120085870 [Benincasa hispida] >XP_038898037.1 uncharacterized protein LOC120085870 [Benincasa hispida] >XP_038898038.1 uncharacterized protein LOC120085870 [Benincasa hispida] >XP_038898039.1 uncharacterized protein LOC120085870 [Benincasa hispida] >XP_038898040.1 uncharacterized protein LOC120085870 [Benincasa hispida]) HSP 1 Score: 207.2 bits (526), Expect = 9.0e-50 Identity = 110/131 (83.97%), Postives = 115/131 (87.79%), Query Frame = 0
BLAST of CcUC05G099490 vs. NCBI nr
Match: XP_022940547.1 (uncharacterized protein LOC111446115 [Cucurbita moschata] >XP_022940548.1 uncharacterized protein LOC111446115 [Cucurbita moschata] >XP_022940549.1 uncharacterized protein LOC111446115 [Cucurbita moschata]) HSP 1 Score: 200.3 bits (508), Expect = 1.1e-47 Identity = 107/131 (81.68%), Postives = 115/131 (87.79%), Query Frame = 0
BLAST of CcUC05G099490 vs. NCBI nr
Match: XP_022981972.1 (uncharacterized protein LOC111480963 [Cucurbita maxima] >XP_022981973.1 uncharacterized protein LOC111480963 [Cucurbita maxima] >XP_022981974.1 uncharacterized protein LOC111480963 [Cucurbita maxima] >XP_022981975.1 uncharacterized protein LOC111480963 [Cucurbita maxima] >XP_022981976.1 uncharacterized protein LOC111480963 [Cucurbita maxima]) HSP 1 Score: 199.1 bits (505), Expect = 2.5e-47 Identity = 106/131 (80.92%), Postives = 115/131 (87.79%), Query Frame = 0
BLAST of CcUC05G099490 vs. NCBI nr
Match: XP_023524149.1 (uncharacterized protein LOC111788150 [Cucurbita pepo subsp. pepo] >XP_023524150.1 uncharacterized protein LOC111788150 [Cucurbita pepo subsp. pepo] >XP_023524151.1 uncharacterized protein LOC111788150 [Cucurbita pepo subsp. pepo] >XP_023524152.1 uncharacterized protein LOC111788150 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 198.7 bits (504), Expect = 3.2e-47 Identity = 105/131 (80.15%), Postives = 115/131 (87.79%), Query Frame = 0
BLAST of CcUC05G099490 vs. NCBI nr
Match: KAG7037563.1 (putative E3 ubiquitin-protein ligase HIP1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 188.3 bits (477), Expect = 4.3e-44 Identity = 103/131 (78.63%), Postives = 111/131 (84.73%), Query Frame = 0
BLAST of CcUC05G099490 vs. ExPASy TrEMBL
Match: A0A6J1FKJ9 (uncharacterized protein LOC111446115 OS=Cucurbita moschata OX=3662 GN=LOC111446115 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 5.3e-48 Identity = 107/131 (81.68%), Postives = 115/131 (87.79%), Query Frame = 0
BLAST of CcUC05G099490 vs. ExPASy TrEMBL
Match: A0A6J1J3B4 (uncharacterized protein LOC111480963 OS=Cucurbita maxima OX=3661 GN=LOC111480963 PE=4 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 1.2e-47 Identity = 106/131 (80.92%), Postives = 115/131 (87.79%), Query Frame = 0
BLAST of CcUC05G099490 vs. ExPASy TrEMBL
Match: A0A0A0LJG2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G881840 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.5e-45 Identity = 106/138 (76.81%), Postives = 113/138 (81.88%), Query Frame = 0
BLAST of CcUC05G099490 vs. ExPASy TrEMBL
Match: A0A6J1C5H9 (probable E3 ubiquitin-protein ligase RHG1A OS=Momordica charantia OX=3673 GN=LOC111008445 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 3.0e-43 Identity = 102/133 (76.69%), Postives = 114/133 (85.71%), Query Frame = 0
BLAST of CcUC05G099490 vs. ExPASy TrEMBL
Match: A0A6J1F8U9 (uncharacterized RING finger protein P4H10.07-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443372 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 5.2e-43 Identity = 102/131 (77.86%), Postives = 110/131 (83.97%), Query Frame = 0
BLAST of CcUC05G099490 vs. TAIR 10
Match: AT5G24870.1 (RING/U-box superfamily protein ) HSP 1 Score: 55.1 bits (131), Expect = 5.3e-08 Identity = 47/132 (35.61%), Postives = 71/132 (53.79%), Query Frame = 0
BLAST of CcUC05G099490 vs. TAIR 10
Match: AT5G24870.2 (RING/U-box superfamily protein ) HSP 1 Score: 55.1 bits (131), Expect = 5.3e-08 Identity = 47/132 (35.61%), Postives = 71/132 (53.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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