CcUC05G097900 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC05G097900
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr05: 26144361 .. 26144887 (+)
RNA-Seq ExpressionCcUC05G097900
SyntenyCcUC05G097900
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCGAATCAGGCCGAAATTGCTTTTTGGTTGGGCCACACAAGAGCGTCCAAATCCATGGTTTCAATGCAGCTTCTTCGACCGTGGATTATCGAATAGACGACATGTGGGTTTTGCACGGGCCGATCGGACACCATTAACGACGATCCATTACCTCCATCTTCTTCACCACGCTCTGTTCATTACACCTCCAAATTTTCATTCTCACTAGCTTTACTTTCTCTTCCGAGCTAGTAAATCAAGTGAATATGAGCTTTTCGTTTGCAAGCCAGGAGGTATCGTAGATCGATCTCCATCTGCAATGGCGAACCAGCAACAGGTTGATTCAAGGCCGTGGATTCTCGATGTCGTGCCTTTTATTGTTGTTATTCTAATTGCCGCGCATGTTCTCGCTTTGGTACTTAAATCTCAACTTAAACCTCCACTTTTTCATTCTATTGCACAGCCGGTTCAAGTGCGAAATTCATCATTTGATCTCGGAGGTTTTGTGTTAGGTGTACTGGATTTACAGATTAGCGACGGATAA

mRNA sequence

ATGGGCGAATCAGGCCGAAATTGCTTTTTGGTTGGGCCACACAAGAGCGTCCAAATCCATGGTTTCAATGCAGCTTCTTCGACCGTGGATTATCGAATAGACGACATTAAATCAAGTGAATATGAGCTTTTCGTTTGCAAGCCAGGAGGTATCGTAGATCGATCTCCATCTGCAATGGCGAACCAGCAACAGGTTGATTCAAGGCCGTGGATTCTCGATGTCGTGCCTTTTATTGTTGTTATTCTAATTGCCGCGCATGTTCTCGCTTTGGTACTTAAATCTCAACTTAAACCTCCACTTTTTCATTCTATTGCACAGCCGGTTCAAGTGCGAAATTCATCATTTGATCTCGGAGGTTTTGTGTTAGGTGTACTGGATTTACAGATTAGCGACGGATAA

Coding sequence (CDS)

ATGGGCGAATCAGGCCGAAATTGCTTTTTGGTTGGGCCACACAAGAGCGTCCAAATCCATGGTTTCAATGCAGCTTCTTCGACCGTGGATTATCGAATAGACGACATTAAATCAAGTGAATATGAGCTTTTCGTTTGCAAGCCAGGAGGTATCGTAGATCGATCTCCATCTGCAATGGCGAACCAGCAACAGGTTGATTCAAGGCCGTGGATTCTCGATGTCGTGCCTTTTATTGTTGTTATTCTAATTGCCGCGCATGTTCTCGCTTTGGTACTTAAATCTCAACTTAAACCTCCACTTTTTCATTCTATTGCACAGCCGGTTCAAGTGCGAAATTCATCATTTGATCTCGGAGGTTTTGTGTTAGGTGTACTGGATTTACAGATTAGCGACGGATAA

Protein sequence

MGESGRNCFLVGPHKSVQIHGFNAASSTVDYRIDDIKSSEYELFVCKPGGIVDRSPSAMANQQQVDSRPWILDVVPFIVVILIAAHVLALVLKSQLKPPLFHSIAQPVQVRNSSFDLGGFVLGVLDLQISDG
Homology
BLAST of CcUC05G097900 vs. NCBI nr
Match: XP_008453078.1 (PREDICTED: uncharacterized protein LOC103493902 [Cucumis melo])

HSP 1 Score: 112.5 bits (280), Expect = 2.9e-21
Identity = 63/98 (64.29%), Postives = 70/98 (71.43%), Query Frame = 0

Query: 6   RNCFLVGPHKSVQIHGFNAASSTVDYRID-----------DIKSSEYEL-FVCKPGGIVD 65
           ++CFLVGPH+SVQIHGF+ ASSTVDYRID            + +  Y   F  +     D
Sbjct: 29  KSCFLVGPHESVQIHGFSGASSTVDYRIDHNIAFARADRTPLTTVHYHASFSLRRYPNRD 88

Query: 66  RSPSAMANQQQVDSRPWILDVVPFIVVILIAAHVLALV 92
           RSPSAMANQQ VDSRPWILDVVPFIVVILI AHVLALV
Sbjct: 89  RSPSAMANQQNVDSRPWILDVVPFIVVILITAHVLALV 126

BLAST of CcUC05G097900 vs. NCBI nr
Match: KAG7037665.1 (hypothetical protein SDJN02_01295, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 72.8 bits (177), Expect = 2.5e-09
Identity = 50/93 (53.76%), Postives = 56/93 (60.22%), Query Frame = 0

Query: 9  FLVGPHKSVQ----IHGFNAAS-------STVDYRIDDIKSSEYELFVCKPGGIVDRSPS 68
          FLVG H+S Q    + G +  S       +T+ Y      SS  E   C      DRS S
Sbjct: 11 FLVGSHESAQKDLDLRGRSRISWADRTPLTTIHYL---SSSSPRECHSC------DRSLS 70

Query: 69 AMANQQQVDSRPWILDVVPFIVVILIAAHVLAL 91
           MANQQQVDSRPWILD+VPFIVVILIAAHVLAL
Sbjct: 71 VMANQQQVDSRPWILDLVPFIVVILIAAHVLAL 94

BLAST of CcUC05G097900 vs. NCBI nr
Match: KAG7024397.1 (hypothetical protein SDJN02_13211 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-07
Identity = 42/74 (56.76%), Postives = 43/74 (58.11%), Query Frame = 0

Query: 59  MANQQQVDSRPWILDVVPFIVVILIAAHVLALVLKSQLKPPLFHSIAQPVQVRNSSFDLG 118
           MANQQQVDSRPWILDVVPFIVVILIAAHVLA                             
Sbjct: 1   MANQQQVDSRPWILDVVPFIVVILIAAHVLAC---------------------------- 45

Query: 119 GFVLGVLDLQISDG 133
            FV G+LDLQISDG
Sbjct: 61  -FVSGLLDLQISDG 45

BLAST of CcUC05G097900 vs. NCBI nr
Match: XP_022935881.1 (uncharacterized protein LOC111442654 [Cucurbita moschata] >XP_022935882.1 uncharacterized protein LOC111442654 [Cucurbita moschata] >XP_022935883.1 uncharacterized protein LOC111442654 [Cucurbita moschata] >XP_022935884.1 uncharacterized protein LOC111442654 [Cucurbita moschata])

HSP 1 Score: 64.3 bits (155), Expect = 8.9e-07
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0

Query: 59 MANQQQVDSRPWILDVVPFIVVILIAAHVLALV 92
          MANQQQVDSRPWILDVVPFIVVILIAAHVLALV
Sbjct: 1  MANQQQVDSRPWILDVVPFIVVILIAAHVLALV 33

BLAST of CcUC05G097900 vs. NCBI nr
Match: XP_023535177.1 (uncharacterized protein LOC111796681 [Cucurbita pepo subsp. pepo] >XP_023535178.1 uncharacterized protein LOC111796681 [Cucurbita pepo subsp. pepo] >XP_023535179.1 uncharacterized protein LOC111796681 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 62.8 bits (151), Expect = 2.6e-06
Identity = 32/33 (96.97%), Postives = 32/33 (96.97%), Query Frame = 0

Query: 59 MANQQQVDSRPWILDVVPFIVVILIAAHVLALV 92
          MANQQQVDSRPWILD VPFIVVILIAAHVLALV
Sbjct: 1  MANQQQVDSRPWILDAVPFIVVILIAAHVLALV 33

BLAST of CcUC05G097900 vs. ExPASy TrEMBL
Match: A0A1S3BWH4 (uncharacterized protein LOC103493902 OS=Cucumis melo OX=3656 GN=LOC103493902 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.4e-21
Identity = 63/98 (64.29%), Postives = 70/98 (71.43%), Query Frame = 0

Query: 6   RNCFLVGPHKSVQIHGFNAASSTVDYRID-----------DIKSSEYEL-FVCKPGGIVD 65
           ++CFLVGPH+SVQIHGF+ ASSTVDYRID            + +  Y   F  +     D
Sbjct: 29  KSCFLVGPHESVQIHGFSGASSTVDYRIDHNIAFARADRTPLTTVHYHASFSLRRYPNRD 88

Query: 66  RSPSAMANQQQVDSRPWILDVVPFIVVILIAAHVLALV 92
           RSPSAMANQQ VDSRPWILDVVPFIVVILI AHVLALV
Sbjct: 89  RSPSAMANQQNVDSRPWILDVVPFIVVILITAHVLALV 126

BLAST of CcUC05G097900 vs. ExPASy TrEMBL
Match: A0A6J1F6U7 (uncharacterized protein LOC111442654 OS=Cucurbita moschata OX=3662 GN=LOC111442654 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 4.3e-07
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0

Query: 59 MANQQQVDSRPWILDVVPFIVVILIAAHVLALV 92
          MANQQQVDSRPWILDVVPFIVVILIAAHVLALV
Sbjct: 1  MANQQQVDSRPWILDVVPFIVVILIAAHVLALV 33

BLAST of CcUC05G097900 vs. ExPASy TrEMBL
Match: A0A6J1IQM9 (uncharacterized protein LOC111477303 OS=Cucurbita maxima OX=3661 GN=LOC111477303 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.3e-06
Identity = 32/33 (96.97%), Postives = 32/33 (96.97%), Query Frame = 0

Query: 59 MANQQQVDSRPWILDVVPFIVVILIAAHVLALV 92
          MANQQQVDSRPWILDVVPFIV ILIAAHVLALV
Sbjct: 1  MANQQQVDSRPWILDVVPFIVAILIAAHVLALV 33

BLAST of CcUC05G097900 vs. ExPASy TrEMBL
Match: A0A0A0L5I3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G651730 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 5.3e-05
Identity = 29/33 (87.88%), Postives = 30/33 (90.91%), Query Frame = 0

Query: 59 MANQQQVDSRPWILDVVPFIVVILIAAHVLALV 92
          MAN+  VDSRPWILDVVPFIVVILI AHVLALV
Sbjct: 1  MANKHNVDSRPWILDVVPFIVVILITAHVLALV 33

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008453078.12.9e-2164.29PREDICTED: uncharacterized protein LOC103493902 [Cucumis melo][more]
KAG7037665.12.5e-0953.76hypothetical protein SDJN02_01295, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG7024397.11.8e-0756.76hypothetical protein SDJN02_13211 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022935881.18.9e-07100.00uncharacterized protein LOC111442654 [Cucurbita moschata] >XP_022935882.1 unchar... [more]
XP_023535177.12.6e-0696.97uncharacterized protein LOC111796681 [Cucurbita pepo subsp. pepo] >XP_023535178.... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3BWH41.4e-2164.29uncharacterized protein LOC103493902 OS=Cucumis melo OX=3656 GN=LOC103493902 PE=... [more]
A0A6J1F6U74.3e-07100.00uncharacterized protein LOC111442654 OS=Cucurbita moschata OX=3662 GN=LOC1114426... [more]
A0A6J1IQM91.3e-0696.97uncharacterized protein LOC111477303 OS=Cucurbita maxima OX=3661 GN=LOC111477303... [more]
A0A0A0L5I35.3e-0587.88Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G651730 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35755PROTEIN, PUTATIVE-RELATEDcoord: 58..92
NoneNo IPR availablePANTHERPTHR35755:SF3EXPRESSED PROTEINcoord: 58..92

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC05G097900.1CcUC05G097900.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane