CcUC05G095360 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G095360
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial
Location	CicolChr05: 17900548 .. 17906423 (-)
RNA-Seq Expression	CcUC05G095360
Synteny	CcUC05G095360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTTATTGTGAATACATATCGCAAAAGTTGAAGCTTCTCTCTTCCATTCTCATTCTGATAGGTTTCTCTCTTTCTTGGTGGCAACAATGGCGACCGGAATCCTGAGGCGGGCATTATCTAGGGTTTCTGCAACGTCACCTTCAAGATTCGTTCGAATTCGAGCTCACGCTTCCGAAGCTGAAGCCCAGCAAGTCGAGCAAAAAGCGGCCGCCTCATCGAACCTGAAGACATTCGCAATTTACCGATGGAACCCCAATAGTCCTTCCAAACCAGAGCTTCAGGAGTACAAGATCGATCTCAAAGAGTGTGGGCCCATGGTACTCGATGCCCTAATCAAAATCAAGAACGAGATGGACCCGTCTCTGACCTTTCGCCGCTCGTGCCGAGAGGGGATCTGCGGTTCCTGTGCGATGAACATCGATGGATGTAACGGATTGGCTTGCTTGACCAAGATTCCCTCTGGAGCTTCCTCCATGATTACGCCGCTGCCTCATATGTTCGTGATCAAGGATCTGGTGGTGGACATGACCAATTTCTATAACCAGTATAAGAGTATTGAGCCGTGGTTGAAGAGGAAGAGCGACCCGCCTGTGCCTGGGAAGGAGATTCTTCAAAGTAAGAAAGATAGGGCTAAGTTGGATGGAATGTATGAGTGTATATTGTGTGCTTGCTGTAGTACATCGTGCCCCAGCTATTGGTGGAACCCGGAGTCTTATCTTGGACCAGCAGCTTTGCTCCATGCCAATAGGTAATTCGTTCACTTTGATTGTTTTGGTTATTCTATGCTTCTCTGTCTGTTAGAAATGAATAGAAAACAGGGACTTTTTACGGGTATTAAGAAGCTACTTGTTAAGGTTGTAAGATTCAAAGGCGTGTTTATTTAGATTACTTTCTGGTGGATTAAAAGTAAGGAGCCATGATTTGGTTATTTGGGTATTCTATTTGAGGGGCTTACGGTGCGTTTCAAGGTGGCTTAAGTGGAATGGAATGCGTAGTATAATTAAAAAGCATCAAGATACCAGCACACCGACTTATCCTGCATATGAATATTGCGAACTATAAGATTTCTAGTGTATAAGAATTAGTATTGCTATGAAAGTAGAGAAGGGAAACTATTGATATATGGTCTTCCAGTGAAGAATTAGAAGGGAAAGTCTGCTAAAAACGAATTAAGAGACCTATCAAAAGAAGGGAATTTCTGTTTATGGAAATGAGAGGAAGAACAGATATCAGGGTATAGGAAAGAATTGAAGAAACTGGAGAACTTTTGAGGTATGCCAAAGCGTGTGTTCATCTGTCATTAGTGGGCCTGAAGATTGGGCACAGCATATACGTAGGTGTGTCTAGGTCGAGAAACGTTTTAATGCCGTCCTACAGTAAGCATAGTTGATAGTTGTACACCTCTTGTGGTACTACTACTAACAAATCAGTAGTCTCTTATTTCACACAACTTTTACCTAGTCAAGGATACAGTCAGGTTGTCATCTCAGTTCTTAGAAGGTGCTTTCCTTCTCTTCTCCTGCTGTGGAAATTGGCACTTGTATGGTATAACTTTTATGATTTGATTGATTGCCTATTGTATAGAGAATCGACTAATTTAATTTGGCTGTTTATCTTTGTTCAACAAAGTCTTAATATGCTTTGGAAGTCGAATTGGGCATGCTGTGCTTCGTACAACTATCTAGAACTTAACCTATTATCAATGACAACTTAGGATAATTTTATTCAACATTTTACTGGTATCCTTACATGATGGAGAAAGTTGTACTTATTCTATTGATTTGGTGCATGTGAACTTTGAAGCAATAACTACTATGGGCTATTGGCTAACCCATGTAATTAAGGGGATCAAAGGTAATGAGTTCATACTTAGGATTTGTATCCTATGAGTTTTTTTTTTTTTACAACCAAATATAGTAAATCTATGAGTTTCTTTAACAACCAAATATGGTCTAGCAATTGCCCATGAGAGTGAGTTGCGTACAACCTTACCATGACACTCATAAATATTTTTAAAAAATGGAAAATGGAAGATAAAAGCTTAGAAGCAATGATCAATACCTAAAGAATCTTTGTATTCAACCCTGCATTCATAATAATTCCTGGCTTCATTATTTTTATTTTATTTATTTTTTTTTTGAAGTAGGCTTCACAAGTTCATGTTGTATTGTATCTTATGTAATTTCATGATTTACTTGTTCCTTTCTTTCACCTCACAATGGCCTGTCACCATGAATTGCAAGAAGATCAACACTGATAATCTTAAATCGTTGTCAAAAATCTTTCCTTACTGCCTTTATTGGTTATTGGTTATTTTCCTTTTTCAATTTTTATTGAAGACACGACTTTTCAATTACGGAATGATCCCTTTGATCCCATTTGTACATTCACAGGTGGATAAGCGATAGCCGTGATGAATATACCAAGGAACGACTTGAGGCAATAAATGATGAATTCAAGCTCTATCGTTGTCATACTATTCTGAACTGTGCCCGTGCCTGTCCCAAGGGTTTGAACCCTGGAAAACAGATCCAAAATATCAAACACCTTCAGCTTGTGGGTTGAGCCCAAGTTTCTAGGTACAATGAAGCAATGATGTTCTTTTCATTCAGTTACCGGATATATTTTGAGAAGTGTTGAACGATGTGATTTTGATCTAATAACTTGTGGATCATTTACTTTCCACCCATTCTGTACTTATAACTCGGGGTTTAAGTATTTATCTGTCTCGAAATAAATATTATTAGAAACCTTTGCTTCATCTTGAGTTGCTGAACCATGATCATCCTTTATTCATCTTATTTGATTAAAAATGGCTCGTCCAAAAATAAAATATATATATTGGTGTTTATTTGTTATAGTGCTATAGGGGAGAGGTTCTTCCGGGAGAACACAGACCCAGGTTTAGTTTTCATTTTCCATTTCCCATTTCATTCGATGACTTTATGAGGCTGTTTGAGGAGCTAGAATGTAATAGGATTACTGAGAATCAGAGGAGTATTGGAATGCGTGAGAACTCGAGGAAGAAACGAAAATGAGATCATGAAGCGTGAAAATGATAGGAAATGGGGTTGGGTTGAAAACTGTTGAAACGGAATAGGTTTTGTATTACAAATCGAGTTTAAAACACTCAAACCAAACATTAATTTTGGATTATATTACATTACAATCACATCCTATTACGGTCCCCTAAACACCCCCTATATGTCAAGACTGTGTTCTGAATCTACCTTGGGCACATTTCAAATAAATTGTCAGAAAAATGACAAACAAACAAGAACACAAGGAAGGTAGACAAACCATACTGAAAGGCATGAAGTTTTCTTGTGAGTTATAGAATACTAACCTCACGTGGTTTTTATGACACTTTTCATCTTTGTTGAAACTAAACAAAGGATTGTAAATACACTGTAGAACTGAAAAGAATTATGACAGCAGATGTGGGATGATAATTACAATATTCATTAATGTGCCATAAAAGATTGTTTTCTGGTATAGTTAAACCAGGCCATGGAACCTATATAATGTGTGCGTGGCTTCTGCTGAAACTTCACCAACCGAGCAGCTAATCTTTTACCAAACTTCTAAAAGGCAATTTTTGTTTGTTGTTGCGCTATGAAGTCATTATCAATGCTTACCCTTCTAGTTTTGGTGATCTTTGTGTTGATGGAGGTCAATTCCAGAGTTCATGCCGGGACTCGACTATTGTTCCTTGTAAATAGACAAAACTTTGAATCATCTCAGTTTGTTACTGTAACAGGTATGCAACCATGAGTGTCGATACTCGCTATTGATGAGCATGTGCTAATATTTTGTTCGGTATTTTCATAAATCAAAGCGTACTAGAGTAGTATACAAGGTAATGTAATAAGTTTGATTATAGGTTCCCTAACTTCTATCTTGGTATATAGATTTTCAAAATGTCTAAGTTCTTACCATTTTTAAAAGGTAATTATTTTTTTTAGTTTTTAAACGGTCTCTAGTAGAGTTGATATTAGGTCAACGAACAAAATGATCGTTTGATAGTTAATATGTGTTTATTATCATTATTTTTCTTTTAATGAGTTGGAGTTTTTCTTTTCTTTTCTTTTCTTTTTTTCTAATATATGTTTTATTTTATATACTTGAGGTGAATTAAAAAAACAAATTTGAACTTAGAATTGATTAAAATCAAATTTAAACCGTGGAAACGTAACATGTCACTTTTAAAATCTCGATGATCAAATATAAACTAAATTCAATTCGATGATCCCAAGATCTTTATGTCAAGTGGTCAAGCTCAATTGGCATAGAGCTTGATAGTGATAATGATAAAATAAATTCAAATATAAGACCAAAGTGTATTTTGCTTTCTTTTCTTTTTCTTTTTTTCATTTTAGTTCTAGTCTTAAATTGTCTAAAGTTTAGAATAATCGGCTTATACTCATGATTTCAAGTGTATTCAAATTAGATAGGTTAAAGACATATTGGTAATATGATTTCAAGTATGCGTTAGTTTGGCTTCAATATGTAGAAAGCAAGTATTGGGCAATAATAGATTACATGGCAAAACAATTTGCCAAAGACCACCCACTTTTTTTAAGCGTTGGAGACATAACATGTCTATTTTAAAAGTTTACACACAAATAGTTATTTTGTAAAATTTCAAACATTAAAAAAGACATTTTAAAAATTCTAAAACCAAAATAAATAACTTGAAAATTTTTAAACCAAACTGTTTTGAACACTACAAACTACTTTGTTAGCGGTTGAATTGGCTACGACTACGGAGCAGAGCAAGGATTGAGATGACTCTCTCGTCTCGTCTCTACTCTCACTTGATTCCACATTAACAATTGTCCTGTTTTCTATAAGGAATTATTCTTTTGTTTATTTTTTTTTAGAAAAATTAAATTAGATTATTTTTTAATAAAGAATTTCAATTAAATAGTTGATTTTCATTACGAATCTTTATTCACATTAAATTATTTAATTATTCGTACATAGGAATTTAAAAATAGCTCAAACATAACAAATTATTCATACAATATCACCCTGAGATTCAAACATATAATCTATATGCATGAGTGTGTATATATGTAAATATATATATTTTTAAAGAAATAATAGAAACAAATTATACCTTTTCTTTTTCAATCCTAGATCCTAACAATCAACCACATAGAACACCAGAACCACATAGAACACCAGATCAATTTGAGGCACGACTAAATTATAGACACTAAATCCTTTGTTTTGGATCTTACAAGCCAAATTGAAATCAAACTATTGGTTGACCAAATTGAAATCACGTCCTAACCAAATTCATAATTTAACCATTAATATAAATCCTCCAAGACGGTTAAAATCTACAACATATTGAAAAATTTCCCATGTATTTGACTTCAAGGATTACTTCACAATATCAATGACATCAACATTTTTCATAAATTTGAGATTAGAAATTTGATGTCAACAAACTCATGATAATAAACTATGATCAGGCCTTTTGTACTATAAAGAATGGCCTCTATTAGAAAATAATAACTTTCTTTTTCTTTTAAAACCCTTTGTCAATTCTCATTAAACATATAAACAATGGGTAGTAAATTAAACGAAGAGCATAGATGAGAGAATCCTGACTTACCAAGAATTGATACAGCCAAATTCACCTAGTACTTGCAAAAAGTATCCTTGTTAACATTTATGAAATCTTAACCAAAGGAACTTTCTCATATTGGAAAATGTGTAATGTAGGGTGCAATAATGACTGTGACACTGCCTGTTGTAACTGTGATATCTGGAAACACCCACCTCTCTGTGTGCAATGCTGCAAAGAGCCTTGACAATATCTACACTACTAAACATGCTCAGCTATTACTTCAACTGGATTGA

mRNA sequence

AATTTTATTGTGAATACATATCGCAAAAGTTGAAGCTTCTCTCTTCCATTCTCATTCTGATAGGTTTCTCTCTTTCTTGGTGGCAACAATGGCGACCGGAATCCTGAGGCGGGCATTATCTAGGGTTTCTGCAACGTCACCTTCAAGATTCGTTCGAATTCGAGCTCACGCTTCCGAAGCTGAAGCCCAGCAAGTCGAGCAAAAAGCGGCCGCCTCATCGAACCTGAAGACATTCGCAATTTACCGATGGAACCCCAATAGTCCTTCCAAACCAGAGCTTCAGGAGTACAAGATCGATCTCAAAGAGTGTGGGCCCATGGTACTCGATGCCCTAATCAAAATCAAGAACGAGATGGACCCGTCTCTGACCTTTCGCCGCTCGTGCCGAGAGGGGATCTGCGGTTCCTGTGCGATGAACATCGATGGATGTAACGGATTGGCTTGCTTGACCAAGATTCCCTCTGGAGCTTCCTCCATGATTACGCCGCTGCCTCATATGTTCGTGATCAAGGATCTGGTGGTGGACATGACCAATTTCTATAACCAGTATAAGAGTATTGAGCCGTGGTTGAAGAGGAAGAGCGACCCGCCTGTGCCTGGGAAGGAGATTCTTCAAAGTAAGAAAGATAGGGCTAAGTTGGATGGAATGTATGAGTGTATATTGTGTGCTTGCTGTAGTACATCGTGCCCCAGCTATTGGTGGAACCCGGAGTCTTATCTTGGACCAGCAGCTTTGCTCCATGCCAATAGGTGGATAAGCGATAGCCGTGATGAATATACCAAGGAACGACTTGAGGCAATAAATGATGAATTCAAGCTCTATCGTTGTCATACTATTCTGAACTGTGCCCGTGCCTGTCCCAAGGGTTTGAACCCTGGAAAACAGATCCAAAATATCAAACACCTTCAGCTTGGTGCAATAATGACTGTGACACTGCCTGTTGTAACTGTGATATCTGGAAACACCCACCTCTCTGTGTGCAATGCTGCAAAGAGCCTTGACAATATCTACACTACTAAACATGCTCAGCTATTACTTCAACTGGATTGA

Coding sequence (CDS)

ATGGCGACCGGAATCCTGAGGCGGGCATTATCTAGGGTTTCTGCAACGTCACCTTCAAGATTCGTTCGAATTCGAGCTCACGCTTCCGAAGCTGAAGCCCAGCAAGTCGAGCAAAAAGCGGCCGCCTCATCGAACCTGAAGACATTCGCAATTTACCGATGGAACCCCAATAGTCCTTCCAAACCAGAGCTTCAGGAGTACAAGATCGATCTCAAAGAGTGTGGGCCCATGGTACTCGATGCCCTAATCAAAATCAAGAACGAGATGGACCCGTCTCTGACCTTTCGCCGCTCGTGCCGAGAGGGGATCTGCGGTTCCTGTGCGATGAACATCGATGGATGTAACGGATTGGCTTGCTTGACCAAGATTCCCTCTGGAGCTTCCTCCATGATTACGCCGCTGCCTCATATGTTCGTGATCAAGGATCTGGTGGTGGACATGACCAATTTCTATAACCAGTATAAGAGTATTGAGCCGTGGTTGAAGAGGAAGAGCGACCCGCCTGTGCCTGGGAAGGAGATTCTTCAAAGTAAGAAAGATAGGGCTAAGTTGGATGGAATGTATGAGTGTATATTGTGTGCTTGCTGTAGTACATCGTGCCCCAGCTATTGGTGGAACCCGGAGTCTTATCTTGGACCAGCAGCTTTGCTCCATGCCAATAGGTGGATAAGCGATAGCCGTGATGAATATACCAAGGAACGACTTGAGGCAATAAATGATGAATTCAAGCTCTATCGTTGTCATACTATTCTGAACTGTGCCCGTGCCTGTCCCAAGGGTTTGAACCCTGGAAAACAGATCCAAAATATCAAACACCTTCAGCTTGGTGCAATAATGACTGTGACACTGCCTGTTGTAACTGTGATATCTGGAAACACCCACCTCTCTGTGTGCAATGCTGCAAAGAGCCTTGACAATATCTACACTACTAAACATGCTCAGCTATTACTTCAACTGGATTGA

Protein sequence

MATGILRRALSRVSATSPSRFVRIRAHASEAEAQQVEQKAAASSNLKTFAIYRWNPNSPSKPELQEYKIDLKECGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSGASSMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSDPPVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQLGAIMTVTLPVVTVISGNTHLSVCNAAKSLDNIYTTKHAQLLLQLD

Homology

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BLAST of CcUC05G095360 vs. NCBI nr
Match: KAG6581069.1 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 565.1 bits (1455), Expect = 3.9e-157
Identity = 278/310 (89.68%), Postives = 289/310 (93.23%), Query Frame = 0


Query: 1   MATGILRRALSRVSATSPSRFVRIRAHASEAEAQQVEQKAAASSNLKTFAIYRWNPNSPS 60
           MA+GILRRA++RVSATSPSRFVRIRAHAS AEAQQVEQKAAAS+NLKTFAIYRWNP+SPS
Sbjct: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSDPPVPGKEILQSKKD 180
           TKIPSGASS ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKS+PPVPGKEILQSKKD
Sbjct: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQL----GAIMTVTLPVVTVISGNTHLS 300
           EFKLYRCHTILNCARACPK        + + HL +    GAIMTVTLP VTVIS N HLS
Sbjct: 241 EFKLYRCHTILNCARACPKD-------ETLNHLSMLRYQGAIMTVTLPAVTVISINNHLS 300

Query: 301 VCNAAKSLDN 307
            CNAAKSLDN
Sbjct: 301 ACNAAKSLDN 303

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BLAST of CcUC05G095360 vs. NCBI nr
Match: XP_038898422.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Benincasa hispida])

HSP 1 Score: 563.5 bits (1451), Expect = 1.1e-156
Identity = 271/275 (98.55%), Postives = 274/275 (99.64%), Query Frame = 0


Query: 1   MATGILRRALSRVSATSPSRFVRIRAHASEAEAQQVEQKAAASSNLKTFAIYRWNPNSPS 60
           MATGILRRA+SRVSATSPSRFVRIRAHASEAEAQQVEQKAAASSNLKTFAIYRWNPNSPS
Sbjct: 1   MATGILRRAISRVSATSPSRFVRIRAHASEAEAQQVEQKAAASSNLKTFAIYRWNPNSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DPSLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSDPPVPGKEILQSKKD 180
           TKI SGASSMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKS+PPVPGKEILQSKKD
Sbjct: 121 TKISSGASSMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQL 276
           EFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQL
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQL 275

[Close]

BLAST of CcUC05G095360 vs. NCBI nr
Match: XP_022935005.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [Cucurbita moschata] >KAG7017798.1 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 552.0 bits (1421), Expect = 3.4e-153
Identity = 264/275 (96.00%), Postives = 272/275 (98.91%), Query Frame = 0


Query: 1   MATGILRRALSRVSATSPSRFVRIRAHASEAEAQQVEQKAAASSNLKTFAIYRWNPNSPS 60
           MA+GILRRA++RVSATSPSRFVRIRAHAS AEAQQVEQKAAAS+NLKTFAIYRWNP+SPS
Sbjct: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSDPPVPGKEILQSKKD 180
           TKIPSGASS ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKS+PPVPGKEILQSKKD
Sbjct: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQL 276
           EFKLYRCHTILNCARACPKGLNPGKQIQNIK LQL
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQL 275

[Close]

BLAST of CcUC05G095360 vs. NCBI nr
Match: XP_008450036.1 (PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucumis melo] >ADN34136.1 succinate dehydrogenase [Cucumis melo subsp. melo])

HSP 1 Score: 550.8 bits (1418), Expect = 7.6e-153
Identity = 265/275 (96.36%), Postives = 270/275 (98.18%), Query Frame = 0


Query: 1   MATGILRRALSRVSATSPSRFVRIRAHASEAEAQQVEQKAAASSNLKTFAIYRWNPNSPS 60
           MATGILRR LSRVSA+SPSRFVRIRAHASEAEAQQVEQKA ASSNLKTFAIYRWNP+SPS
Sbjct: 1   MATGILRRVLSRVSASSPSRFVRIRAHASEAEAQQVEQKATASSNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DPSLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSDPPVPGKEILQSKKD 180
           TKIPSG SS ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKS+PPVPGKEILQSKKD
Sbjct: 121 TKIPSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQL 276
           EFKLYRCHTILNCARACPKGLNPGKQIQ+IK LQL
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQL 275

[Close]

BLAST of CcUC05G095360 vs. NCBI nr
Match: XP_023527486.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 550.4 bits (1417), Expect = 1.0e-152
Identity = 263/275 (95.64%), Postives = 271/275 (98.55%), Query Frame = 0


Query: 1   MATGILRRALSRVSATSPSRFVRIRAHASEAEAQQVEQKAAASSNLKTFAIYRWNPNSPS 60
           MA+GILRRA++RVSATSPSRFVRIRAHAS AEAQQVEQK AAS+NLKTFAIYRWNP+SPS
Sbjct: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKVAASTNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSDPPVPGKEILQSKKD 180
           TKIPSGASS ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKS+PPVPGKEILQSKKD
Sbjct: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQL 276
           EFKLYRCHTILNCARACPKGLNPGKQIQNIK LQL
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQL 275

[Close]

BLAST of CcUC05G095360 vs. ExPASy Swiss-Prot
Match: Q8LB02 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-2 PE=1 SV=2)

HSP 1 Score: 458.4 bits (1178), Expect = 6.8e-128
Identity = 220/277 (79.42%), Postives = 242/277 (87.36%), Query Frame = 0


Query: 1   MATGILRRALSRVSA--TSPSRFVRIRAHASEAEAQQVEQKAAASSNLKTFAIYRWNPNS 60
           MA G++ R +   S+  ++ +R +  R  ++ +EAQ         ++LKTF IYRWNP++
Sbjct: 1   MAFGLIGRVVGTKSSRLSTAARLIPARWTSTGSEAQSKASTGGGGASLKTFQIYRWNPDN 60

Query: 61  PSKPELQEYKIDLKECGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLA 120
           P KPELQ+YKIDLK+CGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLA
Sbjct: 61  PGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLA 120

Query: 121 CLTKIPSGA-SSMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSDPPVPGKEILQS 180
           CLTKI SG+  + ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+   VPGKEILQS
Sbjct: 121 CLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEILQS 180

Query: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240
           KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA
Sbjct: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240

Query: 241 INDEFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQ 275
           I+DEFKLYRCHTILNCARACPKGLNPGKQI +IK LQ
Sbjct: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 277

[Close]

BLAST of CcUC05G095360 vs. ExPASy Swiss-Prot
Match: Q8LBZ7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-1 PE=1 SV=2)

HSP 1 Score: 449.5 bits (1155), Expect = 3.1e-125
Identity = 219/278 (78.78%), Postives = 239/278 (85.97%), Query Frame = 0


Query: 1   MATGILRRALSRVSA--TSPSRFVRIRAHASEAEAQ-QVEQKAAASSNLKTFAIYRWNPN 60
           MA+G++ R +    +   + +R +  R  ++ AEA+ +        SNLKTF IYRWNP+
Sbjct: 1   MASGLIGRLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPD 60

Query: 61  SPSKPELQEYKIDLKECGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL 120
           +P KPELQ Y+IDLK+CGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  NPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKIPSGAS-SMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSDPPVPGKEILQ 180
           ACLTKI   AS + ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+   VP KEILQ
Sbjct: 121 ACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQ 180

Query: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 240
           SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE
Sbjct: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 240

Query: 241 AINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQ 275
           AI+DEFKLYRCHTILNCARACPKGLNPGKQI +IK LQ
Sbjct: 241 AIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 278

[Close]

BLAST of CcUC05G095360 vs. ExPASy Swiss-Prot
Match: Q9S827 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH2-1 PE=1 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 9.2e-117
Identity = 206/281 (73.31%), Postives = 228/281 (81.14%), Query Frame = 0


Query: 2   ATGILRRALSRVSATSP---SRFVRIRAHASEAEAQQVEQKAAASSNLKTFAIYRWNPNS 61
           A  +LRR+ +  +  SP   SR V  + H+S         KA A  N KTF+IYRW+P+S
Sbjct: 3   AAALLRRSPAARALLSPALSSRLVASKPHSSSPAPPPPPSKAGA--NTKTFSIYRWDPDS 62

Query: 62  PS-KPELQEYKIDLKECGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL 121
           PS KP L++YK+DL +CGPMVLD L+KIKNE DPSLTFRRSCREGICGSCAMNIDG NGL
Sbjct: 63  PSTKPHLKDYKVDLSDCGPMVLDVLLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGL 122

Query: 122 ACLTKIPSGAS-SMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSDPPVPGKEILQ 181
           ACLTKI S +S S I+PLPHMFVIKDLVVDMTNFYNQYKS+EPWLKRK  PP PGKEI Q
Sbjct: 123 ACLTKISSASSASTISPLPHMFVIKDLVVDMTNFYNQYKSVEPWLKRKDAPPQPGKEIPQ 182

Query: 182 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 241
           +K DRAKLDGMYECILCACCSTSCPSYWWNPE YLGPAALLHANRWI DSRD++TKERL+
Sbjct: 183 TKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDQFTKERLD 242

Query: 242 AINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQLGA 278
           +INDEFKLYRCHTI NC  ACPKGLNP K I  IK LQL A
Sbjct: 243 SINDEFKLYRCHTIKNCTHACPKGLNPAKHIDTIKKLQLEA 281

[Close]

BLAST of CcUC05G095360 vs. ExPASy Swiss-Prot
Match: P21914 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Drosophila melanogaster OX=7227 GN=SdhB PE=2 SV=2)

HSP 1 Score: 342.8 bits (878), Expect = 4.1e-93
Identity = 166/275 (60.36%), Postives = 203/275 (73.82%), Query Frame = 0


Query: 7   RRALSRVSATSPSRFVRIRAHASEAEAQQVEQKAAASSNLKTFAIYRWNP-NSPSKPELQ 66
           R+ LSRV +      +R  ++ +    QQ + K A    +K F IYRWNP N+  KP +Q
Sbjct: 7   RQILSRVGSLVARNQMRAISNGTAQLEQQAQPKEAQEPQIKKFEIYRWNPDNAGEKPYMQ 66

Query: 67  EYKIDLKECGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIP- 126
            Y++DL+ECGPMVLDALIKIKNEMDP+LTFRRSCREGICGSCAMNI G N LAC++KI  
Sbjct: 67  TYEVDLRECGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDI 126

Query: 127 -SGASSMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSDP-PVPGK-EILQSKKDR 186
            +  S  + PLPHM+V++DLV DM NFY QY++I+PWL+RK++     GK + LQS +DR
Sbjct: 127 NTSKSLKVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWLQRKNEAGEKKGKAQYLQSVEDR 186

Query: 187 AKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAINDE 246
           +KLDG+YECILCACCSTSCPSYWWN E YLGPA L+ A RWI DSRDE + ERL  + D 
Sbjct: 187 SKLDGLYECILCACCSTSCPSYWWNAEKYLGPAVLMQAYRWIIDSRDENSAERLNKLKDP 246

Query: 247 FKLYRCHTILNCARACPKGLNPGKQIQNIKHLQLG 277
           F +YRCHTI+NC R CPKGLNPG+ I  IK L  G
Sbjct: 247 FSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 281

[Close]

BLAST of CcUC05G095360 vs. ExPASy Swiss-Prot
Match: B0BM36 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Xenopus tropicalis OX=8364 GN=sdhb PE=2 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 2.7e-92
Identity = 156/235 (66.38%), Postives = 186/235 (79.15%), Query Frame = 0


Query: 42  ASSNLKTFAIYRWNPNSP-SKPELQEYKIDLKECGPMVLDALIKIKNEMDPSLTFRRSCR 101
           A + +K FAIYRW+P+ P  KP +Q Y++DL ECG MVLDALIKIKNEMDP+LTFRRSCR
Sbjct: 39  AEARIKKFAIYRWDPDKPGDKPRMQTYEVDLNECGSMVLDALIKIKNEMDPTLTFRRSCR 98

Query: 102 EGICGSCAMNIDGCNGLACLTKIPSGAS--SMITPLPHMFVIKDLVVDMTNFYNQYKSIE 161
           EGICGSCAMNI+G N LAC  +I +  S  S I PLPHM+V+KDLV D++NFY QYKSIE
Sbjct: 99  EGICGSCAMNINGGNTLACTVRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIE 158

Query: 162 PWLKRKSDPPVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLH 221
           P+LK+K +     ++ LQS +DR KLDG+YECILCACCSTSCPSYWWN + YLGPA L+ 
Sbjct: 159 PYLKKKDESQEGKEQYLQSIEDRDKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQ 218

Query: 222 ANRWISDSRDEYTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKHL 274
           A RW+ DSRD+YT+ERL  + D F LYRCHTI+NC R CPKGLNPGK I  IK +
Sbjct: 219 AYRWMIDSRDDYTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKM 273

[Close]

BLAST of CcUC05G095360 vs. ExPASy TrEMBL
Match: A0A6J1F9C7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111441997 PE=3 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 1.7e-153
Identity = 264/275 (96.00%), Postives = 272/275 (98.91%), Query Frame = 0


Query: 1   MATGILRRALSRVSATSPSRFVRIRAHASEAEAQQVEQKAAASSNLKTFAIYRWNPNSPS 60
           MA+GILRRA++RVSATSPSRFVRIRAHAS AEAQQVEQKAAAS+NLKTFAIYRWNP+SPS
Sbjct: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSDPPVPGKEILQSKKD 180
           TKIPSGASS ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKS+PPVPGKEILQSKKD
Sbjct: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQL 276
           EFKLYRCHTILNCARACPKGLNPGKQIQNIK LQL
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQL 275

[Close]

BLAST of CcUC05G095360 vs. ExPASy TrEMBL
Match: E5GCD7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 3.7e-153
Identity = 265/275 (96.36%), Postives = 270/275 (98.18%), Query Frame = 0


Query: 1   MATGILRRALSRVSATSPSRFVRIRAHASEAEAQQVEQKAAASSNLKTFAIYRWNPNSPS 60
           MATGILRR LSRVSA+SPSRFVRIRAHASEAEAQQVEQKA ASSNLKTFAIYRWNP+SPS
Sbjct: 1   MATGILRRVLSRVSASSPSRFVRIRAHASEAEAQQVEQKATASSNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DPSLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSDPPVPGKEILQSKKD 180
           TKIPSG SS ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKS+PPVPGKEILQSKKD
Sbjct: 121 TKIPSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQL 276
           EFKLYRCHTILNCARACPKGLNPGKQIQ+IK LQL
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQL 275

[Close]

BLAST of CcUC05G095360 vs. ExPASy TrEMBL
Match: A0A1S3BP14 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103491745 PE=3 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 3.7e-153
Identity = 265/275 (96.36%), Postives = 270/275 (98.18%), Query Frame = 0


Query: 1   MATGILRRALSRVSATSPSRFVRIRAHASEAEAQQVEQKAAASSNLKTFAIYRWNPNSPS 60
           MATGILRR LSRVSA+SPSRFVRIRAHASEAEAQQVEQKA ASSNLKTFAIYRWNP+SPS
Sbjct: 1   MATGILRRVLSRVSASSPSRFVRIRAHASEAEAQQVEQKATASSNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DPSLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSDPPVPGKEILQSKKD 180
           TKIPSG SS ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKS+PPVPGKEILQSKKD
Sbjct: 121 TKIPSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQL 276
           EFKLYRCHTILNCARACPKGLNPGKQIQ+IK LQL
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQL 275

[Close]

BLAST of CcUC05G095360 vs. ExPASy TrEMBL
Match: A0A6J1J748 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111481863 PE=3 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 1.4e-152
Identity = 262/275 (95.27%), Postives = 271/275 (98.55%), Query Frame = 0


Query: 1   MATGILRRALSRVSATSPSRFVRIRAHASEAEAQQVEQKAAASSNLKTFAIYRWNPNSPS 60
           MA+GILRRA++RVSAT PSRFVRIRAHA+ AEAQQVEQKAAAS+NLKTFAIYRWNP+SPS
Sbjct: 1   MASGILRRAIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSDPPVPGKEILQSKKD 180
           TKIPSGASS ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKS+PPVPGKEILQSKKD
Sbjct: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQL 276
           EFKLYRCHTILNCARACPKGLNPGKQIQNIK LQL
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQL 275

[Close]

BLAST of CcUC05G095360 vs. ExPASy TrEMBL
Match: A0A6J1DJI7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111021478 PE=3 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 7.0e-152
Identity = 263/275 (95.64%), Postives = 269/275 (97.82%), Query Frame = 0


Query: 1   MATGILRRALSRVSATSPSRFVRIRAHASEAEAQQVEQKAAASSNLKTFAIYRWNPNSPS 60
           MATG+LRR +SRVSAT  SRFVRIRAHASEA+AQQVEQKAAA+SNLKTFAIYRWNP+SPS
Sbjct: 1   MATGMLRRTISRVSATPFSRFVRIRAHASEAQAQQVEQKAAAASNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DPSLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSDPPVPGKEILQSKKD 180
           TKIPSGASS ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKS P VPGKEILQSKKD
Sbjct: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSAPSVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQL 276
           EFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQL
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQL 275

[Close]

BLAST of CcUC05G095360 vs. TAIR 10
Match: AT5G40650.1 (succinate dehydrogenase 2-2 )

HSP 1 Score: 458.4 bits (1178), Expect = 4.8e-129
Identity = 220/277 (79.42%), Postives = 242/277 (87.36%), Query Frame = 0


Query: 1   MATGILRRALSRVSA--TSPSRFVRIRAHASEAEAQQVEQKAAASSNLKTFAIYRWNPNS 60
           MA G++ R +   S+  ++ +R +  R  ++ +EAQ         ++LKTF IYRWNP++
Sbjct: 1   MAFGLIGRVVGTKSSRLSTAARLIPARWTSTGSEAQSKASTGGGGASLKTFQIYRWNPDN 60

Query: 61  PSKPELQEYKIDLKECGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLA 120
           P KPELQ+YKIDLK+CGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLA
Sbjct: 61  PGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLA 120

Query: 121 CLTKIPSGA-SSMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSDPPVPGKEILQS 180
           CLTKI SG+  + ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+   VPGKEILQS
Sbjct: 121 CLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEILQS 180

Query: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240
           KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA
Sbjct: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240

Query: 241 INDEFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQ 275
           I+DEFKLYRCHTILNCARACPKGLNPGKQI +IK LQ
Sbjct: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 277

[Close]

BLAST of CcUC05G095360 vs. TAIR 10
Match: AT3G27380.1 (succinate dehydrogenase 2-1 )

HSP 1 Score: 449.5 bits (1155), Expect = 2.2e-126
Identity = 219/278 (78.78%), Postives = 239/278 (85.97%), Query Frame = 0


Query: 1   MATGILRRALSRVSA--TSPSRFVRIRAHASEAEAQ-QVEQKAAASSNLKTFAIYRWNPN 60
           MA+G++ R +    +   + +R +  R  ++ AEA+ +        SNLKTF IYRWNP+
Sbjct: 1   MASGLIGRLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPD 60

Query: 61  SPSKPELQEYKIDLKECGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL 120
           +P KPELQ Y+IDLK+CGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  NPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKIPSGAS-SMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSDPPVPGKEILQ 180
           ACLTKI   AS + ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+   VP KEILQ
Sbjct: 121 ACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQ 180

Query: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 240
           SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE
Sbjct: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 240

Query: 241 AINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQ 275
           AI+DEFKLYRCHTILNCARACPKGLNPGKQI +IK LQ
Sbjct: 241 AIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 278

[Close]

BLAST of CcUC05G095360 vs. TAIR 10
Match: AT3G27380.2 (succinate dehydrogenase 2-1 )

HSP 1 Score: 449.5 bits (1155), Expect = 2.2e-126
Identity = 219/278 (78.78%), Postives = 239/278 (85.97%), Query Frame = 0


Query: 1   MATGILRRALSRVSA--TSPSRFVRIRAHASEAEAQ-QVEQKAAASSNLKTFAIYRWNPN 60
           MA+G++ R +    +   + +R +  R  ++ AEA+ +        SNLKTF IYRWNP+
Sbjct: 1   MASGLIGRLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPD 60

Query: 61  SPSKPELQEYKIDLKECGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL 120
           +P KPELQ Y+IDLK+CGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  NPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKIPSGAS-SMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSDPPVPGKEILQ 180
           ACLTKI   AS + ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+   VP KEILQ
Sbjct: 121 ACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQ 180

Query: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 240
           SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE
Sbjct: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 240

Query: 241 AINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQ 275
           AI+DEFKLYRCHTILNCARACPKGLNPGKQI +IK LQ
Sbjct: 241 AIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 278

[Close]

BLAST of CcUC05G095360 vs. TAIR 10
Match: AT5G65165.1 (succinate dehydrogenase 2-3 )

HSP 1 Score: 321.2 bits (822), Expect = 9.2e-88
Identity = 160/250 (64.00%), Postives = 182/250 (72.80%), Query Frame = 0


Query: 30  EAEAQQVEQKAAASSNLKTFAIYRWNPNSP-SKPELQEYKIDLKECGPMVLDALIKIKNE 89
           E E Q  E K       K F IYRWNP+ P SKP LQ + +DL  CGPMVLD L KIK E
Sbjct: 57  EKEGQHKEVK-------KEFKIYRWNPDKPNSKPFLQSFFVDLSSCGPMVLDVLQKIKAE 116

Query: 90  MDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSGAS--SMITPLPHMFVIKDLVVD 149
            D SL++RRSCREGICGSC+MNIDG N +ACL  I    S  ++ITPLPHM+VIKDLVVD
Sbjct: 117 DDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINPNTSKPTIITPLPHMYVIKDLVVD 176

Query: 150 MTNFYNQYKSIEPWLKRKSDPPVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWN 209
           +TNFY QYKS+EPWLK +  PP  G+E  QS KDR KLDG+YECILCACC+TSCPSYWWN
Sbjct: 177 LTNFYQQYKSMEPWLKTRK-PPKDGREHRQSPKDRKKLDGLYECILCACCTTSCPSYWWN 236

Query: 210 PESYLGPAALLHANRWISDSRDEYTKERLEAIND-EFKLYRCHTILNCARACPKGLNPGK 269
           PE + GPAALL A RWISDSRDEY +ERL+AI + E K+YRC  I NC   CPKGLNP  
Sbjct: 237 PEEFPGPAALLQAYRWISDSRDEYREERLQAITESETKVYRCRAIKNCTATCPKGLNPAS 296

Query: 270 QIQNIKHLQL 276
            I  +K   L
Sbjct: 297 AILKMKSKHL 298

The following BLAST results are available for this feature:

BLAST of CcUC05G095360 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581069.1	3.9e-157	89.68	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial, parti...	[more]
XP_038898422.1	1.1e-156	98.55	succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Benin...	[more]
XP_022935005.1	3.4e-153	96.00	succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [...	[more]
XP_008450036.1	7.6e-153	96.36	PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochond...	[more]
XP_023527486.1	1.0e-152	95.64	succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucur...	[more]

BLAST of CcUC05G095360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LB02	6.8e-128	79.42	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Ara...	[more]
Q8LBZ7	3.1e-125	78.78	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ara...	[more]
Q9S827	9.2e-117	73.31	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ory...	[more]
P21914	4.1e-93	60.36	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Droso...	[more]
B0BM36	2.7e-92	66.38	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Xenop...	[more]

BLAST of CcUC05G095360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F9C7	1.7e-153	96.00	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucur...	[more]
E5GCD7	3.7e-153	96.36	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucum...	[more]
A0A1S3BP14	3.7e-153	96.36	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucum...	[more]
A0A6J1J748	1.4e-152	95.27	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucur...	[more]
A0A6J1DJI7	7.0e-152	95.64	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Momor...	[more]

BLAST of CcUC05G095360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40650.1	4.8e-129	79.42	succinate dehydrogenase 2-2	[more]
AT3G27380.1	2.2e-126	78.78	succinate dehydrogenase 2-1	[more]
AT3G27380.2	2.2e-126	78.78	succinate dehydrogenase 2-1	[more]
AT5G65165.1	9.2e-88	64.00	succinate dehydrogenase 2-3	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025192	Succinate dehydogenase/fumarate reductase N-terminal	PFAM	PF13085	Fer2_3	coord: 48..151 e-value: 7.8E-32 score: 109.5
IPR004489	Succinate dehydrogenase/fumarate reductase iron-sulphur protein	TIGRFAM	TIGR00384	TIGR00384	coord: 51..271 e-value: 1.1E-83 score: 278.0
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 36..146 e-value: 1.3E-39 score: 136.5
IPR009051	Alpha-helical ferredoxin	GENE3D	1.10.1060.10		coord: 147..281 e-value: 4.4E-52 score: 177.3
None	No IPR available	PFAM	PF13534	Fer4_17	coord: 189..262 e-value: 3.2E-9 score: 37.2
None	No IPR available	PANTHER	PTHR11921	SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN	coord: 7..274
None	No IPR available	PANTHER	PTHR11921:SF44	SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT, MITOCHONDRIAL	coord: 7..274
None	No IPR available	SUPERFAMILY	46548	alpha-helical ferredoxin	coord: 147..273
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 99..107
IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	PROSITE	PS00198	4FE4S_FER_1	coord: 190..201
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PROSITE	PS51379	4FE4S_FER_2	coord: 180..210 score: 7.894782
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 60..137 score: 9.415037
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 62..112 e-value: 0.00494177 score: 33.5224
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 46..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G095360.1	CcUC05G095360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022904	respiratory electron transport chain
biological_process	GO:0006099	tricarboxylic acid cycle
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0045273	respiratory chain complex II
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0051538	3 iron, 4 sulfur cluster binding
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008177	succinate dehydrogenase (ubiquinone) activity
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0016491	oxidoreductase activity