CcUC05G093790 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G093790
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Olfactory receptor 4C13 like
Location	CicolChr05: 12425660 .. 12426088 (-)
RNA-Seq Expression	CcUC05G093790
Synteny	CcUC05G093790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAGGTTTTTCCCAAGCATTTCAAATCCTTCTCATCATCATCATCTTTCATTTTCCTCAACGAATTTCTCATTTCTCATCGCTTCAATCGCAGTTCTCTCCATCTTCGCGCTCGTGATTTTCCTCTGCACCTCTTCCAGAAAATCGAACAAATCGCAACGGAGGAATTTCGTGTCGAAGATGAATAGTAACATCAGTTCTAGGGCGATTTCAATGGCGAAGATGATTTCGTGGAGAAAAGTGGAGGCAGCCGATGAAGAAAGAGGAGATAGTGATTTGAGTGGTGAGGATGACGAAGAAGAAGAAGAGGTTTGGAGGAAGACTATTATTAGAGGTGAACGGTGTCGTCCGTTGGAATTTTCTGGTAAAATTGATTATGATTCTGATGGAAATTTGTTGAGTGATTCAAACAGGGAATTCAAATAA

mRNA sequence

ATGGCCAGGTTTTTCCCAAGCATTTCAAATCCTTCTCATCATCATCATCTTTCATTTTCCTCAACGAATTTCTCATTTCTCATCGCTTCAATCGCAGTTCTCTCCATCTTCGCGCTCGTGATTTTCCTCTGCACCTCTTCCAGAAAATCGAACAAATCGCAACGGAGGAATTTCGTGTCGAAGATGAATAGTAACATCAGTTCTAGGGCGATTTCAATGGCGAAGATGATTTCGTGGAGAAAAGTGGAGGCAGCCGATGAAGAAAGAGGAGATAGTGATTTGAGTGGTGAGGATGACGAAGAAGAAGAAGAGGTTTGGAGGAAGACTATTATTAGAGGTGAACGGTGTCGTCCGTTGGAATTTTCTGGTAAAATTGATTATGATTCTGATGGAAATTTGTTGAGTGATTCAAACAGGGAATTCAAATAA

Coding sequence (CDS)

ATGGCCAGGTTTTTCCCAAGCATTTCAAATCCTTCTCATCATCATCATCTTTCATTTTCCTCAACGAATTTCTCATTTCTCATCGCTTCAATCGCAGTTCTCTCCATCTTCGCGCTCGTGATTTTCCTCTGCACCTCTTCCAGAAAATCGAACAAATCGCAACGGAGGAATTTCGTGTCGAAGATGAATAGTAACATCAGTTCTAGGGCGATTTCAATGGCGAAGATGATTTCGTGGAGAAAAGTGGAGGCAGCCGATGAAGAAAGAGGAGATAGTGATTTGAGTGGTGAGGATGACGAAGAAGAAGAAGAGGTTTGGAGGAAGACTATTATTAGAGGTGAACGGTGTCGTCCGTTGGAATTTTCTGGTAAAATTGATTATGATTCTGATGGAAATTTGTTGAGTGATTCAAACAGGGAATTCAAATAA

Protein sequence

MARFFPSISNPSHHHHLSFSSTNFSFLIASIAVLSIFALVIFLCTSSRKSNKSQRRNFVSKMNSNISSRAISMAKMISWRKVEAADEERGDSDLSGEDDEEEEEVWRKTIIRGERCRPLEFSGKIDYDSDGNLLSDSNREFK

Homology

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BLAST of CcUC05G093790 vs. NCBI nr
Match: KGN57848.1 (hypothetical protein Csa_010872 [Cucumis sativus])

HSP 1 Score: 197.6 bits (501), Expect = 7.3e-47
Identity = 116/151 (76.82%), Postives = 125/151 (82.78%), Query Frame = 0


Query: 1   MARFFPSISNPSHHHHLSFSSTNFSFLIASIAV-LSIFALVIFLCTSSRKSNKSQ--RRN 60
           MAR FP+ISN SH  HL F ST+FSFLI S +V LSIFAL+IFLCTSSRKSNKSQ  R N
Sbjct: 1   MARPFPTISNLSHPLHLLFFSTHFSFLILSTSVILSIFALLIFLCTSSRKSNKSQQGRNN 60

Query: 61  FVSKMNSNISSRAISMAKMISWRKVEAADEERGDSDLSGE------DDEEEEEVWRKTII 120
           FVSKMNSNISSRAISMAKMISWRKVEAA+EE  + +  G       D +EEEEVWRKTII
Sbjct: 61  FVSKMNSNISSRAISMAKMISWRKVEAAEEEEEEEEERGSGGCDFIDKDEEEEVWRKTII 120

Query: 121 RGERCRPLEFSGKIDYDSDGNLLSDSNREFK 143
           RGERCRPLEFSGKIDYDSDGNLL DSNR+FK
Sbjct: 121 RGERCRPLEFSGKIDYDSDGNLLCDSNRDFK 151

[Close]

BLAST of CcUC05G093790 vs. NCBI nr
Match: XP_038906595.1 (uncharacterized protein LOC120092546 [Benincasa hispida])

HSP 1 Score: 195.7 bits (496), Expect = 2.8e-46
Identity = 113/135 (83.70%), Postives = 119/135 (88.15%), Query Frame = 0


Query: 1   MARFFPSISNPSHHHH---LSFSSTNFSFLIASIAVLSIFALVIFLCTSSRKSNKS-QRR 60
           MAR FPSISNPSHHHH   L FSSTNFSFLI+SIAVLSIFALV+FLCTSSRKSNKS QRR
Sbjct: 1   MARLFPSISNPSHHHHHHLLPFSSTNFSFLISSIAVLSIFALVVFLCTSSRKSNKSQQRR 60

Query: 61  NFVSKMNSNISSRAISMAKMISWRKVEAADEE-----RGDSDLSGEDDEE-EEEVWRKTI 120
           NFVSKMNSNISSRAISMAKMISWRKVEAADEE     RG  +LSG+D+EE EEEVWRKTI
Sbjct: 61  NFVSKMNSNISSRAISMAKMISWRKVEAADEEDEEERRGSCNLSGDDEEEDEEEVWRKTI 120

Query: 121 IRGERCRPLEFSGKI 126
           IRGERCRPLEFS  +
Sbjct: 121 IRGERCRPLEFSDSV 135

[Close]

BLAST of CcUC05G093790 vs. NCBI nr
Match: TYK22452.1 (hypothetical protein E5676_scaffold712G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 189.9 bits (481), Expect = 1.5e-44
Identity = 111/148 (75.00%), Postives = 125/148 (84.46%), Query Frame = 0


Query: 1   MARFFPSISNPSHHHHLSFSSTNFSF-LIASIAVLSIFALVIFLCTSSRKSNKSQ--RRN 60
           MAR FP+ISN SHH HL F ST+FSF ++++  +LSIFAL+IFLCTSS KSNKSQ  +  
Sbjct: 1   MARPFPTISNLSHHPHLLFFSTHFSFPILSTSTILSIFALLIFLCTSSTKSNKSQQGKTT 60

Query: 61  FVSKMNSNISSRAISMAKMISWRKVEAAD---EERGDSDLSGEDDEEEEEVWRKTIIRGE 120
           FVSKMNSNISSRAISMAK+ISWRKVEAAD   EERG    S ++ E+EEEVWRKTIIRGE
Sbjct: 61  FVSKMNSNISSRAISMAKIISWRKVEAADELEEERGSG--SCDELEDEEEVWRKTIIRGE 120

Query: 121 RCRPLEFSGKIDYDSDGNLLSDSNREFK 143
           RCRPLEFSGKIDYDSDGNLL DSNR+FK
Sbjct: 121 RCRPLEFSGKIDYDSDGNLLCDSNRDFK 146

[Close]

BLAST of CcUC05G093790 vs. NCBI nr
Match: KAG7036703.1 (hypothetical protein SDJN02_00323, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 183.7 bits (465), Expect = 1.1e-42
Identity = 110/150 (73.33%), Postives = 122/150 (81.33%), Query Frame = 0


Query: 1   MARFFPSISNPSHHHHLSFSSTNFSFLIASIAVLSIFALVIFLCTSSRKSNKS---QRRN 60
           MA+ FPS SN  H +HL FSS +   L+ASIAVLSIFALVIFLCTSSRKS K    Q+RN
Sbjct: 1   MAKPFPSFSN--HSYHLPFSSPS---LVASIAVLSIFALVIFLCTSSRKSKKPILLQQRN 60

Query: 61  FVSKMNSNISSRAISMAKMISWRKVEAADEERGDS-----DLSGEDDEEEEEVWRKTIIR 120
           FV+K+NSNISSRAIS+AKMISWRKVEAADE+ G       DLSG  D+ ++EVWRKTIIR
Sbjct: 61  FVAKVNSNISSRAISIAKMISWRKVEAADEDEGGGGGGGFDLSG--DDYDDEVWRKTIIR 120

Query: 121 GERCRPLEFSGKIDYDSDGNLLSDSNREFK 143
           GERCRPLEFSGKIDYDSDGNLL DS REFK
Sbjct: 121 GERCRPLEFSGKIDYDSDGNLLCDSKREFK 143

[Close]

BLAST of CcUC05G093790 vs. NCBI nr
Match: KAG6607004.1 (hypothetical protein SDJN03_00346, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 183.0 bits (463), Expect = 1.9e-42
Identity = 110/152 (72.37%), Postives = 122/152 (80.26%), Query Frame = 0


Query: 1   MARFFPSISNPSHHHHLSFSSTNFSFLIASIAVLSIFALVIFLCTSSRKSNKS---QRRN 60
           MA+ FPS SN  H +HL FSS +   L+ASIAVLSIFALVIFLCTSSRKS K    Q+RN
Sbjct: 1   MAKPFPSFSN--HSYHLPFSSPS---LVASIAVLSIFALVIFLCTSSRKSKKPILLQQRN 60

Query: 61  FVSKMNSNISSRAISMAKMISWRKVEAADEERGDS-------DLSGEDDEEEEEVWRKTI 120
           FV+K+NSNISSRAIS+AKMISWRKVEAADE+ G         DLSG  D+ ++EVWRKTI
Sbjct: 61  FVAKVNSNISSRAISIAKMISWRKVEAADEDEGGGGGGGGGFDLSG--DDYDDEVWRKTI 120

Query: 121 IRGERCRPLEFSGKIDYDSDGNLLSDSNREFK 143
           IRGERCRPLEFSGKIDYDSDGNLL DS REFK
Sbjct: 121 IRGERCRPLEFSGKIDYDSDGNLLCDSKREFK 145

[Close]

BLAST of CcUC05G093790 vs. ExPASy TrEMBL
Match: A0A0A0L7R8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G348940 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 3.5e-47
Identity = 116/151 (76.82%), Postives = 125/151 (82.78%), Query Frame = 0


Query: 1   MARFFPSISNPSHHHHLSFSSTNFSFLIASIAV-LSIFALVIFLCTSSRKSNKSQ--RRN 60
           MAR FP+ISN SH  HL F ST+FSFLI S +V LSIFAL+IFLCTSSRKSNKSQ  R N
Sbjct: 1   MARPFPTISNLSHPLHLLFFSTHFSFLILSTSVILSIFALLIFLCTSSRKSNKSQQGRNN 60

Query: 61  FVSKMNSNISSRAISMAKMISWRKVEAADEERGDSDLSGE------DDEEEEEVWRKTII 120
           FVSKMNSNISSRAISMAKMISWRKVEAA+EE  + +  G       D +EEEEVWRKTII
Sbjct: 61  FVSKMNSNISSRAISMAKMISWRKVEAAEEEEEEEEERGSGGCDFIDKDEEEEVWRKTII 120

Query: 121 RGERCRPLEFSGKIDYDSDGNLLSDSNREFK 143
           RGERCRPLEFSGKIDYDSDGNLL DSNR+FK
Sbjct: 121 RGERCRPLEFSGKIDYDSDGNLLCDSNRDFK 151

[Close]

BLAST of CcUC05G093790 vs. ExPASy TrEMBL
Match: A0A5D3DFS8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold712G00010 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 7.4e-45
Identity = 111/148 (75.00%), Postives = 125/148 (84.46%), Query Frame = 0


Query: 1   MARFFPSISNPSHHHHLSFSSTNFSF-LIASIAVLSIFALVIFLCTSSRKSNKSQ--RRN 60
           MAR FP+ISN SHH HL F ST+FSF ++++  +LSIFAL+IFLCTSS KSNKSQ  +  
Sbjct: 1   MARPFPTISNLSHHPHLLFFSTHFSFPILSTSTILSIFALLIFLCTSSTKSNKSQQGKTT 60

Query: 61  FVSKMNSNISSRAISMAKMISWRKVEAAD---EERGDSDLSGEDDEEEEEVWRKTIIRGE 120
           FVSKMNSNISSRAISMAK+ISWRKVEAAD   EERG    S ++ E+EEEVWRKTIIRGE
Sbjct: 61  FVSKMNSNISSRAISMAKIISWRKVEAADELEEERGSG--SCDELEDEEEVWRKTIIRGE 120

Query: 121 RCRPLEFSGKIDYDSDGNLLSDSNREFK 143
           RCRPLEFSGKIDYDSDGNLL DSNR+FK
Sbjct: 121 RCRPLEFSGKIDYDSDGNLLCDSNRDFK 146

[Close]

BLAST of CcUC05G093790 vs. ExPASy TrEMBL
Match: A0A5A7V4T5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00580 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.7e-25
Identity = 69/84 (82.14%), Postives = 74/84 (88.10%), Query Frame = 0


Query: 62  MNSNISSRAISMAKMISWRKVEAAD---EERGDSDLSGEDDEEEEEVWRKTIIRGERCRP 121
           MNSNISSRAISMAK+ISWRKVEAAD   EERG    S ++ E+EEEVWRKTIIRGERCRP
Sbjct: 1   MNSNISSRAISMAKIISWRKVEAADELEEERGSG--SCDELEDEEEVWRKTIIRGERCRP 60

Query: 122 LEFSGKIDYDSDGNLLSDSNREFK 143
           LEFSGKIDYDSDGNLL DSNR+FK
Sbjct: 61  LEFSGKIDYDSDGNLLCDSNRDFK 82

[Close]

BLAST of CcUC05G093790 vs. ExPASy TrEMBL
Match: A0A5E4G755 (PREDICTED: LOC100277003 OS=Prunus dulcis OX=3755 GN=ALMOND_2B003044 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.9e-24
Identity = 76/147 (51.70%), Postives = 96/147 (65.31%), Query Frame = 0


Query: 6   PSISNPSHH--HHLSFSSTNFSFLIASIAVLSIFALVIFLCTSSRKSNKSQRR------- 65
           PS S  SHH   H S       FL A I   S+F+LVIFLC +SRKS KS ++       
Sbjct: 7   PSFSMASHHLFQHQS------HFLFALIVFFSMFSLVIFLC-ASRKSKKSHKKKEEAITN 66

Query: 66  ------NFVSKMNSNISSRAISMAKMISWRKVEAADEERGDSDLSGEDDEEEEEVWRKTI 125
                  F++K+NS ISS+A++MAKM+SWRK+EA +E++ D D   +DD  +E VWRK+I
Sbjct: 67  SESKDAKFIAKLNSKISSKALAMAKMVSWRKMEAGEEDQKDDD---DDDHSDEAVWRKSI 126

Query: 126 IRGERCRPLEFSGKIDYDSDGNLLSDS 138
           I GERC PL FSGKIDYDSDGNL  +S
Sbjct: 127 IMGERCAPLNFSGKIDYDSDGNLQPES 143

[Close]

BLAST of CcUC05G093790 vs. ExPASy TrEMBL
Match: A0A6J5WQZ0 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS21513 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 3.9e-22
Identity = 77/172 (44.77%), Postives = 101/172 (58.72%), Query Frame = 0


Query: 6   PSISNPSHH--HHLSFSSTNFSFLIASIAVLSIFALVIFLCTS--SRKSN---------- 65
           PS S  SHH   H S       FL A I + S+F+L+IFLC S  S+KSN          
Sbjct: 7   PSFSMASHHLFQHPS------HFLFAPIVIFSMFSLLIFLCASHKSKKSNEKKEEAITNS 66

Query: 66  KSQRRNFVSKMNSNISSRAISMAKMISWRKVEAADEERGDSD--------------LSGE 125
           +S+   F++K+NS ISS+A++MAKM+SWRK+EA +E++ D D              + GE
Sbjct: 67  ESKDAKFIAKLNSKISSKALAMAKMVSWRKMEAGEEDQKDDDDDDHSDEAVWRKSIIMGE 126

Query: 126 ------------DDEEEEEVWRKTIIRGERCRPLEFSGKIDYDSDGNLLSDS 138
                       DD+ +E VWRK+II GERC PL FSGKIDYDS+GNLL +S
Sbjct: 127 RCTPLNDDDDDDDDDRDEAVWRKSIIMGERCAPLNFSGKIDYDSEGNLLPES 172

[Close]

BLAST of CcUC05G093790 vs. TAIR 10
Match: AT3G18560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49000.1); Has 95 Blast hits to 95 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 8.1e-04
Identity = 26/77 (33.77%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 61  KMNSNISSRAISMAKMISWRKVEAAD---EERGDSDLSGEDDEEEEEVWRKTIIRGERCR 120
           ++ + +S++A++M      RK +A D    ++   ++  E+DEEE  VW++ I+ G +C 
Sbjct: 90  ELYTTLSNKAMTMV----GRKNKAYDGGPTKKTAVEMVMEEDEEEYGVWQREILMGGKCE 149

Query: 121 PLEFSGKIDYDSDGNLL 135
           PL++SG I YD  G+ L
Sbjct: 150 PLDYSGVIYYDCSGHQL 162

The following BLAST results are available for this feature:

BLAST of CcUC05G093790 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN57848.1	7.3e-47	76.82	hypothetical protein Csa_010872 [Cucumis sativus]	[more]
XP_038906595.1	2.8e-46	83.70	uncharacterized protein LOC120092546 [Benincasa hispida]	[more]
TYK22452.1	1.5e-44	75.00	hypothetical protein E5676_scaffold712G00010 [Cucumis melo var. makuwa]	[more]
KAG7036703.1	1.1e-42	73.33	hypothetical protein SDJN02_00323, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6607004.1	1.9e-42	72.37	hypothetical protein SDJN03_00346, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CcUC05G093790 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC05G093790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7R8	3.5e-47	76.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G348940 PE=4 SV=1	[more]
A0A5D3DFS8	7.4e-45	75.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V4T5	1.7e-25	82.14	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5E4G755	1.9e-24	51.70	PREDICTED: LOC100277003 OS=Prunus dulcis OX=3755 GN=ALMOND_2B003044 PE=4 SV=1	[more]
A0A6J5WQZ0	3.9e-22	44.77	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS21513 PE=...	[more]

BLAST of CcUC05G093790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18560.1	8.1e-04	33.77	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..142
None	No IPR available	PANTHER	PTHR33237	F2P16.13 PROTEIN-RELATED	coord: 23..137
None	No IPR available	PANTHER	PTHR33237:SF31	PROTEIN, PUTATIVE-RELATED	coord: 23..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G093790.1	CcUC05G093790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane