CcUC05G093580 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC05G093580
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr05: 11989919 .. 11990317 (-)
RNA-Seq ExpressionCcUC05G093580
SyntenyCcUC05G093580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTTAGGAATCAATCTAAACTAAAGAAGAGGTTAGAAAACCCAAGTTCCCAACTGCCAAATAAAAAGAGTTTCAAAACAACTCGGGTTTCAACTATTCCCAGTTAAATTCACACAATTCAAAAGAAGAAACTTCGCTAGACCTGTAATCGGAAGCGGCACGCAAATTCCCAGCAGATAGAGCCTCAGCAGCGTCGGCATTACGTTGGTCATCGTCGAGGGTGCTACCATACTCGCTCTTGATGGACCATGAGTCGGCGGCCACTGAGCGGTCATCGTCAGAGACCAGATCAACGGCGGACGGAGCAGCCCGAGCCTGCTGCAACAACTCGGCATCTTCCGGCGTCAATCGAATCGCAGCCATGATCAGAAGAAATAGAAGAAAAAAGAAACCCTAG

mRNA sequence

ATGCCGGCACGCAAATTCCCAGCAGATAGAGCCTCAGCAGCGTCGGCATTACGTTGGTCATCGTCGAGGGTGCTACCATACTCGCTCTTGATGGACCATGAGTCGGCGGCCACTGAGCGGTCATCGTCAGAGACCAGATCAACGGCGGACGGAGCAGCCCGAGCCTGCTGCAACAACTCGGCATCTTCCGGCGTCAATCGAATCGCAGCCATGATCAGAAGAAATAGAAGAAAAAAGAAACCCTAG

Coding sequence (CDS)

ATGCCGGCACGCAAATTCCCAGCAGATAGAGCCTCAGCAGCGTCGGCATTACGTTGGTCATCGTCGAGGGTGCTACCATACTCGCTCTTGATGGACCATGAGTCGGCGGCCACTGAGCGGTCATCGTCAGAGACCAGATCAACGGCGGACGGAGCAGCCCGAGCCTGCTGCAACAACTCGGCATCTTCCGGCGTCAATCGAATCGCAGCCATGATCAGAAGAAATAGAAGAAAAAAGAAACCCTAG

Protein sequence

MPARKFPADRASAASALRWSSSRVLPYSLLMDHESAATERSSSETRSTADGAARACCNNSASSGVNRIAAMIRRNRRKKKP
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..57

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC05G093580.1CcUC05G093580.1mRNA