CcUC05G092440 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC05G092440
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionDUF4283 domain-containing protein
LocationCicolChr05: 10334387 .. 10336726 (+)
RNA-Seq ExpressionCcUC05G092440
SyntenyCcUC05G092440
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAAAATTAAAAAGAATCTGGCCAAATTCACTCTTTCTTCACATTTAAGATTAAACATGCCATCTATGAATTATTTGCGATTTTTAAACTTGGTTTTTCGATGAAAATGACTAAATGTATGCAATTTTCATCAGAATTCTTTGGATCAAAAGCTAAATAATTCTAGAAAATGAGAATTATGAGCAAGTAAATGGAGGGTTAAATAAAATTATCCAACCAGGGACAACAACAAAGTTGGGTGGAATGGTTTCCTCTCTCTTCTCAAGGCACCAACAAAGCAGTCCAACAGCAAGCAAAAACCCAGTTATTTATCATCAACTACCTCCTGCAAAGAAGCACTTCTCCATGTTCTGCCAAAGACTAGTCAGCCAAAAATCCCCATCACACAACAACCTTCTTCGTTACCATCAAAATTGAATAAACTTGCAGCTTTCGACCCAGAAAAATCCATGATTTTCTATCGACAAAACTTACATGAGAATTGGTATGAAATACTTGGCGCTTTCCAAAAGTGTCGGATTTTGGCTCCATTACACTACAACCCAACACGGCCATCTTGGCAGTCGAAAATAGTGAGCACAGGTTTATTTTAAGCAACATCCGTGATTGAGACAAGGTTGGATCCTTTACGGTGAAATCTCGAGCCATGGAGCATTGAAGCCTTTTACAACCATCAAATGGTGCCTTCTTATGTAGGTTGGGTTAAGATTAGAAATTTTGCCAATGATAAATGGTCCCATGAATCTTTCCAATTTATTGGTGACACTTGTCGAGGCTTTTTAGACGTGGCAAAGAAGACCTTAGGAAGAATGGACATGATGGAAGGTTGTTTAAAAGTGAAGAAAAATGAAAATGGATTTCTCCTGGCCACTGTTCATCTTCCAGCCATGAAAAAAGTGCTGATTTATGTCCATGTTGATCCATTGAAAATGAGTTAGAGTTAATTCTATTAAAAGTTTGGACTTGATTTGTATTTGGGCTTGGTTAGATTAAGGTAAAAAATGTAGTAGGATTAAGATATATAAGTTATCTTGGTCAAATCGCTAATTGATTAGGATTAGGATGAGGTTTATTATTGAAATGAACTCTTGGTTTGAGGTTCTTGAACTTCTTGAGGGTTCGGTGGGTTTCTTGCAGCAACTACTCTTTGGAGCACTTCTTGCGCTTGTAAATTTGCTTGAGCCAATATTTGAATAAATTGAGTAATTGATTGCCACATTTCCTGAAAACCTTTTTTTGACGATTCCACCAACTGCAACTGCATAGACCAGTTTCATAGGTCATAATTTTAAAGAAACTTGATATTCTGTAATGGTCTGAATTTGCCAACATGAAACTTCGAAATTTTAAATTTTATATTTTGTTTTCTTTTCAGGATCTTCCTAACTATGCTCAGCACACTGTGCCCATTTTCTCTCTACCACAAGAATGGCTCTGGTGTGAGTCATGGTGTGGTAATGCCACAAAATCCAAGGCGAAAACCATAGATCTCTGTAACAACCCCATGACCAAAGAACCTAAGCTTCAGGTCCGACTCTTGTTTCTTCATTTCATTCTGTATCTTCAGAAGCATAATCACGCCATATCTTTACTCTTTGTTTTGCATGCTTTTTCATCTTAATCATTCATTGAAATTAGTTGCATTTATCAGGGTGCTAGAAGAATTGTTCCCGAATGGCCAGATCTTGATTTGGAGGCCAGAACATTCACAGCTAAAATATTAGGTGATATAAACCCTCAAAAACCTGTCTTATCGACGGATCAAGCCGACAATTCTGCAAATAAGGAGTCTATTGATGAAGAATCAAAGGCAGAGTTATAATGGGATCCTTTAAATTCTACTACATTAGACTGATGGGAAGATGCTGCTTCTTCAATTCAACATGTCATACTTCTACCATAAGTTAGCCTTCTTAGAATTAACTTGGAAGCAGATGGGCACCTGGCTCTGTAGGCTGATAATGCAGTGAAGACATGCCTCTCCCCTCAATTTTCATGGAAGAGTTATTTATTCTATTTCCCCCTCTTCTCCAGTACTTTGAATATCAACTTAGTGAAAAAAAGTTGGCAATTTTGATAAAGACGTGTATAGTAGAACAGTTGGTTTTGTAATTTAGTGATGGAGTTTGCAAGAATTTTCTTCCCATTATTCCCATTAGGAAACCTTTTTGTTATGATGCTAGCAATATGCATATTGCCTCCATATTTCATATTACCAAAATGTAATTGAAATTATGAAAATTCTTCATTTATTTTAGAAGTGCTTGAACATTGTACCTCTTCTGATCATTATATGAATCTAGAAGCCATTCCAAACAAGTCTACCTTTTCAAAGTCAAG

mRNA sequence

CCAAAATTAAAAAGAATCTGGCCAAATTCACTCTTTCTTCACATTTAAGATTAAACATGCCATCTATGAATTATTTGCGATTTTTAAACTTGGTTTTTCGATGAAAATGACTAAATGTATGCAATTTTCATCAGAATTCTTTGGATCAAAAGCTAAATAATTCTAGAAAATGAGAATTATGAGCAAGTAAATGGAGGGTTAAATAAAATTATCCAACCAGGGACAACAACAAAGTTGGGTGGAATGGTTTCCTCTCTCTTCTCAAGGCACCAACAAAGCAGTCCAACAGCAAGCAAAAACCCAGTTATTTATCATCAACTACCTCCTGCAAAGAAGCACTTCTCCATGTTCTGCCAAAGACTAGTCAGCCAAAAATCCCCATCACACAACAACCTTCTTCGTTACCATCAAAATTGAATAAACTTGCAGCTTTCGACCCAGAAAAATCCATGATTTTCTATCGACAAAACTTACATGAGAATTGGTATGAAATACTTGGCGCTTTCCAAAAGTGTCGGATTTTGGCTCCATTACACTACAACCCAACACGGCCATCTTGGCAGTCGAAAATAGTGAGCACAGGTTTATTTTAAGCAACATCCGTGATTGAGACAAGGTTGGATCCTTTACGGTGAAATCTCGAGCCATGGAGCATTGAAGCCTTTTACAACCATCAAATGGTGCCTTCTTATGTAGGTTGGGTTAAGATTAGAAATTTTGCCAATGATAAATGGTCCCATGAATCTTTCCAATTTATTGGTGACACTTGTCGAGGCTTTTTAGACGTGGCAAAGAAGACCTTAGGAAGAATGGACATGATGGAAGGTTGTTTAAAAGTGAAGAAAAATGAAAATGGATTTCTCCTGGCCACTGTTCATCTTCCAGCCATGAAAAAAGTGCTGATTTATGTCCATGTTGATCCATTGAAAATGAGTTAGAGTTAATTCTATTAAAAGTTTGGACTTGATTTGTATTTGGGCTTGGTTAGATTAAGGTAAAAAATGTAGTAGGATTAAGATATATAAGTTATCTTGGTCAAATCGCTAATTGATTAGGATTAGGATGAGGTTTATTATTGAAATGAACTCTTGGTTTGAGGTTCTTGAACTTCTTGAGGGTTCGGTGGGTTTCTTGCAGCAACTACTCTTTGGAGCACTTCTTGCGCTTGTAAATTTGCTTGAGCCAATATTTGAATAAATTGAGTAATTGATTGCCACATTTCCTGAAAACCTTTTTTTGACGATTCCACCAACTGCAACTGCATAGACCAGTTTCATAGGATCTTCCTAACTATGCTCAGCACACTGTGCCCATTTTCTCTCTACCACAAGAATGGCTCTGGTGTGAGTCATGGTGTGGTAATGCCACAAAATCCAAGGCGAAAACCATAGATCTCTGTAACAACCCCATGACCAAAGAACCTAAGCTTCAGGGTGCTAGAAGAATTGTTCCCGAATGGCCAGATCTTGATTTGGAGGCCAGAACATTCACAGCTAAAATATTAGGTGATATAAACCCTCAAAAACCTGTCTTATCGACGGATCAAGCCGACAATTCTGCAAATAAGGAGTCTATTGATGAAGAATCAAAGGCAGAGTTATAATGGGATCCTTTAAATTCTACTACATTAGACTGATGGGAAGATGCTGCTTCTTCAATTCAACATGTCATACTTCTACCATAAGTTAGCCTTCTTAGAATTAACTTGGAAGCAGATGGGCACCTGGCTCTGTAGGCTGATAATGCAGTGAAGACATGCCTCTCCCCTCAATTTTCATGGAAGAGTTATTTATTCTATTTCCCCCTCTTCTCCAGTACTTTGAATATCAACTTAGTGAAAAAAAGTTGGCAATTTTGATAAAGACGTGTATAGTAGAACAGTTGGTTTTGTAATTTAGTGATGGAGTTTGCAAGAATTTTCTTCCCATTATTCCCATTAGGAAACCTTTTTGTTATGATGCTAGCAATATGCATATTGCCTCCATATTTCATATTACCAAAATGTAATTGAAATTATGAAAATTCTTCATTTATTTTAGAAGTGCTTGAACATTGTACCTCTTCTGATCATTATATGAATCTAGAAGCCATTCCAAACAAGTCTACCTTTTCAAAGTCAAG

Coding sequence (CDS)

ATGGTGCCTTCTTATGTAGGTTGGGTTAAGATTAGAAATTTTGCCAATGATAAATGGTCCCATGAATCTTTCCAATTTATTGGTGACACTTGTCGAGGCTTTTTAGACGTGGCAAAGAAGACCTTAGGAAGAATGGACATGATGGAAGGTTGTTTAAAAGTGAAGAAAAATGAAAATGGATTTCTCCTGGCCACTGTTCATCTTCCAGCCATGAAAAAAGTGCTGATTTATGTCCATGTTGATCCATTGAAAATGAGTTAG

Protein sequence

MVPSYVGWVKIRNFANDKWSHESFQFIGDTCRGFLDVAKKTLGRMDMMEGCLKVKKNENGFLLATVHLPAMKKVLIYVHVDPLKMS
Homology
[Close]
BLAST of CcUC05G092440 vs. NCBI nr
Match: QWT43305.1 (kinesin-related protein KIN7C [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 94.0 bits (232), Expect = 6.9e-16
Identity = 41/81 (50.62%), Postives = 57/81 (70.37%), Query Frame = 0 

Query: 2   VPSYVGWVKIRNFANDKWSHESFQFIGDTCRGFLDVAKKTLGRMDMMEGCLKVKKNENGF 61
           VPSY  W+KIRN   D+WS+++F+ IG+ C G+++ +KKTL RMDMME  LKVK N+NGF
Sbjct: 240 VPSYGSWIKIRNLLIDQWSYDTFKLIGELCGGYIETSKKTLARMDMMEASLKVKMNKNGF 299

Query: 62  LLATVHLPAMKKVLIYVHVDP 83
           L A + L +     + V +DP
Sbjct: 300 LPAIIQLLSTSAFSMAVQMDP 320

[Close]
BLAST of CcUC05G092440 vs. NCBI nr
Match: KAA0050054.1 (hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-08
Identity = 29/68 (42.65%), Postives = 45/68 (66.18%), Query Frame = 0 

Query: 1   MVPSYVGWVKIRNFANDKWSHESFQFIGDTCRGFLDVAKKTLGRMDMMEGCLKVKKNENG 60
           ++PSY GW+K+R      W+ ESF  IGD C GF++VAK+T    D++E  +++K N +G
Sbjct: 319 VIPSYGGWIKVRGVPLHAWNLESFTQIGDACGGFIEVAKETRELTDIIEASIRIKDNYSG 378

Query: 61  FLLATVHL 69
           F+ A + L
Sbjct: 379 FIPAFIKL 386

[Close]
BLAST of CcUC05G092440 vs. NCBI nr
Match: TYK10355.1 (hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-08
Identity = 29/68 (42.65%), Postives = 45/68 (66.18%), Query Frame = 0 

Query: 1   MVPSYVGWVKIRNFANDKWSHESFQFIGDTCRGFLDVAKKTLGRMDMMEGCLKVKKNENG 60
           ++PSY GW+K+R      W+ ESF  IGD C GF++VAK+T    D++E  +++K N +G
Sbjct: 371 VIPSYGGWIKVRGVPLHAWNLESFTQIGDACGGFIEVAKETRELTDIIEASIRIKDNYSG 430

Query: 61  FLLATVHL 69
           F+ A + L
Sbjct: 431 FIPAFIKL 438

[Close]
BLAST of CcUC05G092440 vs. NCBI nr
Match: KAA0044333.1 (hypothetical protein E6C27_scaffold46G00570 [Cucumis melo var. makuwa])

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-08
Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 0 

Query: 1   MVPSYVGWVKIRNFANDKWSHESFQFIGDTCRGFLDVAKKTLGRMDMMEGCLKVKKNENG 60
           ++PSY GW+K+R      W+ ESF  IGD C GF++VAK+T    D++E  ++VK N +G
Sbjct: 217 VIPSYGGWIKVRGVPLHAWNLESFIQIGDACGGFMEVAKETRELTDLIEASIRVKDNYSG 276

Query: 61  FLLATVHL 69
           F+ A + L
Sbjct: 277 FIPAFIKL 284

[Close]
BLAST of CcUC05G092440 vs. NCBI nr
Match: KAA0039967.1 (hypothetical protein E6C27_scaffold122G002490 [Cucumis melo var. makuwa])

HSP 1 Score: 69.7 bits (169), Expect = 1.4e-08
Identity = 30/68 (44.12%), Postives = 44/68 (64.71%), Query Frame = 0 

Query: 1   MVPSYVGWVKIRNFANDKWSHESFQFIGDTCRGFLDVAKKTLGRMDMMEGCLKVKKNENG 60
           ++PSY GW+K+R      W+ ESF  IGD C GF++VAK+T    D+ E  +K+K N +G
Sbjct: 265 VIPSYGGWIKVRGVPLHAWNLESFIQIGDACGGFVEVAKETRELTDIFEASIKIKDNYSG 324

Query: 61  FLLATVHL 69
           F+ A + L
Sbjct: 325 FIPAYIKL 332

[Close]
BLAST of CcUC05G092440 vs. ExPASy TrEMBL
Match: A0A5A7U495 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00340 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.1e-09
Identity = 29/68 (42.65%), Postives = 45/68 (66.18%), Query Frame = 0 

Query: 1   MVPSYVGWVKIRNFANDKWSHESFQFIGDTCRGFLDVAKKTLGRMDMMEGCLKVKKNENG 60
           ++PSY GW+K+R      W+ ESF  IGD C GF++VAK+T    D++E  +++K N +G
Sbjct: 319 VIPSYGGWIKVRGVPLHAWNLESFTQIGDACGGFIEVAKETRELTDIIEASIRIKDNYSG 378

Query: 61  FLLATVHL 69
           F+ A + L
Sbjct: 379 FIPAFIKL 386

[Close]
BLAST of CcUC05G092440 vs. ExPASy TrEMBL
Match: A0A5D3CFS8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00330 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.1e-09
Identity = 29/68 (42.65%), Postives = 45/68 (66.18%), Query Frame = 0 

Query: 1   MVPSYVGWVKIRNFANDKWSHESFQFIGDTCRGFLDVAKKTLGRMDMMEGCLKVKKNENG 60
           ++PSY GW+K+R      W+ ESF  IGD C GF++VAK+T    D++E  +++K N +G
Sbjct: 371 VIPSYGGWIKVRGVPLHAWNLESFTQIGDACGGFIEVAKETRELTDIIEASIRIKDNYSG 430

Query: 61  FLLATVHL 69
           F+ A + L
Sbjct: 431 FIPAFIKL 438

[Close]
BLAST of CcUC05G092440 vs. ExPASy TrEMBL
Match: A0A5A7TLE2 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00570 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.1e-09
Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 0 

Query: 1   MVPSYVGWVKIRNFANDKWSHESFQFIGDTCRGFLDVAKKTLGRMDMMEGCLKVKKNENG 60
           ++PSY GW+K+R      W+ ESF  IGD C GF++VAK+T    D++E  ++VK N +G
Sbjct: 217 VIPSYGGWIKVRGVPLHAWNLESFIQIGDACGGFMEVAKETRELTDLIEASIRVKDNYSG 276

Query: 61  FLLATVHL 69
           F+ A + L
Sbjct: 277 FIPAFIKL 284

[Close]
BLAST of CcUC05G092440 vs. ExPASy TrEMBL
Match: A0A5D3DLP0 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00770 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 6.7e-09
Identity = 30/68 (44.12%), Postives = 44/68 (64.71%), Query Frame = 0 

Query: 1   MVPSYVGWVKIRNFANDKWSHESFQFIGDTCRGFLDVAKKTLGRMDMMEGCLKVKKNENG 60
           ++PSY GW+K+R      W+ ESF  IGD C GF++VAK+T    D+ E  +K+K N +G
Sbjct: 265 VIPSYGGWIKVRGVPLHAWNLESFIQIGDACGGFVEVAKETRELTDIFEASIKIKDNYSG 324

Query: 61  FLLATVHL 69
           F+ A + L
Sbjct: 325 FIPAYIKL 332

[Close]
BLAST of CcUC05G092440 vs. ExPASy TrEMBL
Match: A0A5A7TEK8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002490 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 6.7e-09
Identity = 30/68 (44.12%), Postives = 44/68 (64.71%), Query Frame = 0 

Query: 1   MVPSYVGWVKIRNFANDKWSHESFQFIGDTCRGFLDVAKKTLGRMDMMEGCLKVKKNENG 60
           ++PSY GW+K+R      W+ ESF  IGD C GF++VAK+T    D+ E  +K+K N +G
Sbjct: 265 VIPSYGGWIKVRGVPLHAWNLESFIQIGDACGGFVEVAKETRELTDIFEASIKIKDNYSG 324

Query: 61  FLLATVHL 69
           F+ A + L
Sbjct: 325 FIPAYIKL 332

The following BLAST results are available for this feature:
BLAST of CcUC05G092440 vs. NCBI nr
Match NameE-valueIdentityDescription
QWT43305.16.9e-1650.62kinesin-related protein KIN7C [Citrullus lanatus subsp. vulgaris][more]
KAA0050054.11.1e-0842.65hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa][more]
TYK10355.11.1e-0842.65hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa][more]
KAA0044333.11.1e-0844.12hypothetical protein E6C27_scaffold46G00570 [Cucumis melo var. makuwa][more]
KAA0039967.11.4e-0844.12hypothetical protein E6C27_scaffold122G002490 [Cucumis melo var. makuwa][more]
BLAST of CcUC05G092440 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CcUC05G092440 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U4955.1e-0942.65DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3CFS85.1e-0942.65DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7TLE25.1e-0944.12DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3DLP06.7e-0944.12DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7TEK86.7e-0944.12DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
BLAST of CcUC05G092440 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC05G092440.1CcUC05G092440.1mRNA