CcUC05G091880 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC05G091880
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr05: 9612353 .. 9614089 (-)
RNA-Seq ExpressionCcUC05G091880
SyntenyCcUC05G091880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTCCCATATTAAATGTAAACAGAGTTGATGAACTTCAACAAAACAGCTTACATTTCTGGATTCCTTGTTAACAAGTCTCACTTCTTTGTAGCCAACAAAAGGGCGGAATATGTCTACAGGTGGATGTGAAGGAGACAATAGAATACAATACAAGAATTCCTTTAACAATACAAGAATAGGAAATGAGAAAATTTAAAAAGGATACGAGCTACTTCACGTCGTGTACAGCTGGAAGGCAAGCCTTCCACAAATAGTGTATTAGAAGCATCAGGTGGAAGGGGTATGTTAGGCCTCCCAGCTCCAAAGCTCGTACTTCTATCATTAACATTAGCCCCTGAAACCACACCCCCAATCCCCAATATAGGTGGATCATTGATTGAATGACCAGGAACTCCCCCACCAACAGGTCTAGCAGACTGTCCACCATAAGATGAAATTTGCTGAAAAAAAAAAAGTTGCATGGTTAATTAGAATGAACTTGAATGAGAAAACATATAGAAAACAGAATTGAACCTTCAAAGTGAAATAAGTACCGAGCTGCGTAGGTAACGTTCATAGGACTCATTGATGGAATCAACACTTTTAATTCCTTGGAGCACTGGTCTATCATCTTGACGAGGGTAATAGTTGGGCAACTCGTGAAGACCAGTGGTATCTACAAGCCATTAAGCATGAATTATGTGCCAAATAAAGAAAAGAGGAAAAAGAAAACAAAAACAAAAACAAAAACAAAACAAAAGAAGCCACTCGGTCCACAAAGCATTGCACTGCTTCAATCAACAGTGAAATCATGACTTAAAAAGATAAAAGTACTAATTCGAGAAACCACAAAAATGATCTGAACATTAATATTCTAAACTTTCAGTTATGAAGATCAAAAGTCCACCATTTTACCTTCAAGTTTTTATGAATTGATTTATTTCTGGAAAAATACTTAAAGAGTCATACTTAGAAACCACAAAAATGAAATTGTTGATAAATACGCATTCCTTTTGTGGCATATTCTGAAGCCTTAGAACCAAAAAGCTAGTAAGAACTCAATTTAGAAAAACGGATAACTTCAAATTGCGTATTAACGACACCACTGGCCACTGGGATCCCAAGACTCATGATAACCAACAAATTTGGCTATTTGACTTTAAGAGATCCTTACTTCCAACAAACGTGATCAGCCAATCAGTAAAATTTTGTTATGCGGAGCAAGAAAATATGTAGAAAGACCAGACCAAAGAATCATGCACAAATCGCACTAAATGATGAGGTTGGACGGTGTATAACAATAAGCAGAGCACCTCCTTCCAACCATTCTGGAAATTACCTAACAAATCGACAGCAAATGGATAAAGATACCATATAAAGAGAAAACCCATCTTAACAAAAACAAATCACTGCAGATTACGGTTTCCCAATAATCCCATCTAGCGCTAAAAGTTGGTAAAAACCAAAGACTATAGAATTTAGCAACTGGGATTCATGGGAAAACCTCAAATTCAGTCATCTTAAGAAAACCCTAATTCCAAATGTACGAAACAAGCGGAGAAAAGAAAAGAAAGGGTATAGAATGGAGTTGTTCCTTAATTACCGTAATCGACGCGAGGGCGCTTGCCGACGACGGCAGGAACCGACGACGGAGGCTGCTGCTGTGAGTCGGTGTACCTCCAATAAGCGTCCGACATGCTCCTACAAAAAAGGCGATGAATTTAGGATGAAACAGCGACTTGCTTTTGCTTGA

mRNA sequence

ATGATGATACGAGCTACTTCACGTCGTGTACAGCTGGAAGGCAAGCCTTCCACAAATAGTGTATTAGAAGCATCAGGTGGAAGGGGTATGTTAGGCCTCCCAGCTCCAAAGCTCGTACTTCTATCATTAACATTAGCCCCTGAAACCACACCCCCAATCCCCAATATAGAATTTAGCAACTGGGATTCATGGGAAAACCTCAAATTCAGTCATCTTAAGAAAACCCTAATTCCAAATGTACGAAACAAGCGGAGAAAAGAAAAGAAAGGGTATAGAATGGAGTTGTTCCTTAATTACCGTAATCGACGCGAGGGCGCTTGCCGACGACGGCAGGAACCGACGACGGAGGCTGCTGCTGTGAGTCGGTGTACCTCCAATAAGCGTCCGACATGCTCCTACAAAAAAGGCGATGAATTTAGGATGAAACAGCGACTTGCTTTTGCTTGA

Coding sequence (CDS)

ATGATGATACGAGCTACTTCACGTCGTGTACAGCTGGAAGGCAAGCCTTCCACAAATAGTGTATTAGAAGCATCAGGTGGAAGGGGTATGTTAGGCCTCCCAGCTCCAAAGCTCGTACTTCTATCATTAACATTAGCCCCTGAAACCACACCCCCAATCCCCAATATAGAATTTAGCAACTGGGATTCATGGGAAAACCTCAAATTCAGTCATCTTAAGAAAACCCTAATTCCAAATGTACGAAACAAGCGGAGAAAAGAAAAGAAAGGGTATAGAATGGAGTTGTTCCTTAATTACCGTAATCGACGCGAGGGCGCTTGCCGACGACGGCAGGAACCGACGACGGAGGCTGCTGCTGTGAGTCGGTGTACCTCCAATAAGCGTCCGACATGCTCCTACAAAAAAGGCGATGAATTTAGGATGAAACAGCGACTTGCTTTTGCTTGA

Protein sequence

MMIRATSRRVQLEGKPSTNSVLEASGGRGMLGLPAPKLVLLSLTLAPETTPPIPNIEFSNWDSWENLKFSHLKKTLIPNVRNKRRKEKKGYRMELFLNYRNRREGACRRRQEPTTEAAAVSRCTSNKRPTCSYKKGDEFRMKQRLAFA
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC05G091880.1CcUC05G091880.1mRNA