CcUC05G091770 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G091770
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	RWP-RK domain-containing protein
Location	CicolChr05: 9541249 .. 9543452 (-)
RNA-Seq Expression	CcUC05G091770
Synteny	CcUC05G091770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTAACACCAAACTAAATCCTCAAAGCCTTCAGAATCCACTGGACTTTGACTGGCTACAAGAAGATCTCTTCCCATTCCACAAGTAAGAAGAAAAAAAAAAAAAAAACTTGTTTGTTTCTCGGGAAAATGGGGGAGAAAGTGATTTCATGCTGGAGAAAATCCCAAGATGAAAATTTTACGACATGGGTTGATTTTTAATCCATTTATCTCAATTGGGTTCTGCTAAATTTTGTTTTTTTTTTAATTCAAATACTACTTTCGCCCTAATATCCTAGTTTCATGTTCGTTTGAGTTCATATACTTTCAATTTTGGTTCATTTAGAACATATACTTTTAAAATGTTCATTTTTTTTAAAAGGTAAGTCCAAAATGAGCTAAAATTAAAAGTACAGGGATTAAAACGAACATTTTAATAATACAAGGACTACAATGTATCAAAGCCAAAAACACATTAAACTTTTTTTTCTTTTTCGACAGTGGGTTAGAACAGCTTCCTCCTTTGGATGAAGATGGGCTTTTGGACTTCAATTTACATTCATTAACCATTCCATTGGGACAATAGTATTTTGGAGTTGGAGACTGAAATTTGGACAAGAATGATAAAATTAGAAGATGATGAAAGGGGAATTAGAGAGATGATTGAAAGATCAGAGTTTTCATCAAGTTGGAAAGAAGAGGAAGAGGAAAAGAGATTGAGATTATTGAAGAATGGGAGGAGGAGAAAAAGTAGTTCAGTTTTGGGATTGGAAGAGATTCAAAAGCACTTTCATATACCAATATCAGAGGCAGCAAAACAGATGAATGTTGGGTTGACAGTGCTTAAAAGAAGGTGTAAACAACTTAATAGAAAACTCAAGAGCTTGAATTCTCTCATTCAAGATGTTAAGGCATGTAATATGACTTTATATACATATGCCACGTGGATTCAACATCTGTCTTGTTTGGTAATCATTTATCTGTTTAGTTGTTACTTGATTTCTTGTTTTTTGTTTTGCTTTATGATTTACTTTTTTACCAAAGTTTTCGAAAACCAAGCTAAATTTTAAAAATTAAAAAAAATATATAGTTTTTAGAACTTGTTTTTGTTTTTAAAATTTAGCTAAGAATTTAACTCTTGTACTTGAAAGATATAAATCATTTAAGAAACTAAGAAAGAATTGGCTTAATTTTCAAAAACAAAAAACCAATGTTTTGGTTTTTTGTTTTTGAAAATTAAGCCTGTAAACACTCATTGTTCTTTTTATAAGCGGCTACTTTTTACCAATATTTTTAAAGTCAAGTCAAGTTTCGAAAACCAAAGAAATTAAGTTATGTTTGGTAACCATTTGATTTTTAAAAATTATTTTTCTTTTCTCACCATTCCTTACTCATAGTTTTTAAATTTTCTACGTAAATATTTGAAATCTTAGCAAATATCCAAAAACAAAAAATGTTTTTGAAAAATACTTTTCAAGTTCCTGCTCGGTAGCTATTTCATTTTTTGTTTTTATTTTAAAAATTAAGCCATTTGCATCATTCTTAAATGCAAAAGTTGAATTCTAAGCCAAATTCAAAAAATAATAACAAATTTTTAAAAAACTACTTTTTTGAGTTTTCAAAATTTAGCTTAGTTTTTGAAAATATTGGCAAAAAGTAGGGTATTAAAGAAGAAATTTAAAGATCGTATGAGTGTTTTAGGCTTAATTTTTAAAAATTAAAAACAAAAAACCAAGCGGGTTCCGAACGAGACCTTAGTTTCTAAAAACTTGTTTTAGTTTTTAAAATTTGACTAAAAATTCAAATGTAATATTACTTGAGAAACAAAGGTAAAAAAAATTAATCAAGAGAAAGTAGACATAATTTTCAAAAACTAAATTATTATCGACAAGGCTGTTTTATGTCCTAAAAGAAAAAAAAAAAAAAGATATATATTGAATGTGAGTAGTAGTTTTATAAAACCCCTTTGACATAACTTTTTGTTGATGTTATTCTTGTTTAGGGAGTGAATTTGTTTGAATGGTGATTTATTGTTATTGTTTGGTAGGAGATGGGGTTAACAAATGAGGTAAAAGGGCTGGAGGAGCACAAGAGGCTGATGGAGGAATTGCCAGATTTGGACCTCACACACACAACCAAAAGGCTGAGGCAAGCTTGTTTCAAAGCCAATTACAAGAATAAGAGAAGAATTATTAGGTCCAATAATATTGCTACTCTTCATCACTAA

mRNA sequence

TCTAACACCAAACTAAATCCTCAAAGCCTTCAGAATCCACTGGACTTTGACTGGCTACAAGAAGATCTCTTCCCATTCCACAATATTTTGGAGTTGGAGACTGAAATTTGGACAAGAATGATAAAATTAGAAGATGATGAAAGGGGAATTAGAGAGATGATTGAAAGATCAGAGTTTTCATCAAGTTGGAAAGAAGAGGAAGAGGAAAAGAGATTGAGATTATTGAAGAATGGGAGGAGGAGAAAAAGTAGTTCAGTTTTGGGATTGGAAGAGATTCAAAAGCACTTTCATATACCAATATCAGAGGCAGCAAAACAGATGAATGTTGGGTTGACAGTGCTTAAAAGAAGGTGTAAACAACTTAATAGAAAACTCAAGAGCTTGAATTCTCTCATTCAAGATGAGATGGGGTTAACAAATGAGGTAAAAGGGCTGGAGGAGCACAAGAGGCTGATGGAGGAATTGCCAGATTTGGACCTCACACACACAACCAAAAGGCTGAGGCAAGCTTGTTTCAAAGCCAATTACAAGAATAAGAGAAGAATTATTAGGTCCAATAATATTGCTACTCTTCATCACTAA

Coding sequence (CDS)

TCTAACACCAAACTAAATCCTCAAAGCCTTCAGAATCCACTGGACTTTGACTGGCTACAAGAAGATCTCTTCCCATTCCACAATATTTTGGAGTTGGAGACTGAAATTTGGACAAGAATGATAAAATTAGAAGATGATGAAAGGGGAATTAGAGAGATGATTGAAAGATCAGAGTTTTCATCAAGTTGGAAAGAAGAGGAAGAGGAAAAGAGATTGAGATTATTGAAGAATGGGAGGAGGAGAAAAAGTAGTTCAGTTTTGGGATTGGAAGAGATTCAAAAGCACTTTCATATACCAATATCAGAGGCAGCAAAACAGATGAATGTTGGGTTGACAGTGCTTAAAAGAAGGTGTAAACAACTTAATAGAAAACTCAAGAGCTTGAATTCTCTCATTCAAGATGAGATGGGGTTAACAAATGAGGTAAAAGGGCTGGAGGAGCACAAGAGGCTGATGGAGGAATTGCCAGATTTGGACCTCACACACACAACCAAAAGGCTGAGGCAAGCTTGTTTCAAAGCCAATTACAAGAATAAGAGAAGAATTATTAGGTCCAATAATATTGCTACTCTTCATCACTAA

Protein sequence

SNTKLNPQSLQNPLDFDWLQEDLFPFHNILELETEIWTRMIKLEDDERGIREMIERSEFSSSWKEEEEEKRLRLLKNGRRRKSSSVLGLEEIQKHFHIPISEAAKQMNVGLTVLKRRCKQLNRKLKSLNSLIQDEMGLTNEVKGLEEHKRLMEELPDLDLTHTTKRLRQACFKANYKNKRRIIRSNNIATLHH

Homology

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BLAST of CcUC05G091770 vs. NCBI nr
Match: XP_038886661.1 (protein RKD2 [Benincasa hispida])

HSP 1 Score: 272.3 bits (695), Expect = 3.2e-69
Identity = 163/234 (69.66%), Postives = 180/234 (76.92%), Query Frame = 0


Query: 1   SNTKL-NPQSLQ-NPLDFDWLQEDLFPFHN----------------------------IL 60
           S+TKL NPQ+LQ NP DF+WL EDLFPF N                            IL
Sbjct: 3   SSTKLNNPQTLQNNPHDFEWLHEDLFPFDNGLEELPPLDKDEFLDVNSHSLPFNWDNDIL 62

Query: 61  ELETEIWT--RMIKL-EDDERGIREMIERSEFSSSWKEEEEEKRLRLLKNGRRRKSSSVL 120
           ELETE+ +   MIKL ++DERGI EM ERS FSSSWKEEEEEKRLRL++NGRRRK S VL
Sbjct: 63  ELETEVLSMRSMIKLDQEDERGIIEMTERSGFSSSWKEEEEEKRLRLVRNGRRRKKSLVL 122

Query: 121 GLEEIQKHFHIPISEAAKQMNVGLTVLKRRCKQLN------RKLKSLNSLIQD--EMGLT 180
           GLEEIQKHFH+PISEAAKQMNVGLTVLKRRC+QLN      RKLKSLNSLIQ+  EMGLT
Sbjct: 123 GLEEIQKHFHMPISEAAKQMNVGLTVLKRRCRQLNIMRWPHRKLKSLNSLIQNVKEMGLT 182

Query: 181 NEVKGLEEHKRLMEELPDLDLTHTTKRLRQACFKANYKNKRRIIRSNNIATLHH 194
           NEVKGLEEHKRL+EELPD+DLTH+TKRLRQACFKANYK +R  IRSN+IATLHH
Sbjct: 183 NEVKGLEEHKRLVEELPDMDLTHSTKRLRQACFKANYKKRR--IRSNDIATLHH 234

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BLAST of CcUC05G091770 vs. NCBI nr
Match: TYK29190.1 (protein RKD4 [Cucumis melo var. makuwa])

HSP 1 Score: 219.5 bits (558), Expect = 2.4e-53
Identity = 135/238 (56.72%), Postives = 160/238 (67.23%), Query Frame = 0


Query: 6   NPQSLQN---PLDFDWLQEDLFPFHN------------------------------ILEL 65
           NPQ+L N     DF+WL EDLFP HN                              +LE 
Sbjct: 10  NPQTLHNIIPQFDFEWLHEDLFPLHNELDELPPLDNDELLDVNSRSLLPFHLDDNDVLEF 69

Query: 66  ETEIWTRMIKLEDDERGIREMIERSEFSSSWKEEEE------EKRLRLLKN---GRRRKS 125
           ++E  +R +++ +        IER+ FSS+WKEEEE      EKRLRL+ N    +RRK 
Sbjct: 70  DSEFLSRELEMVE--------IERNGFSSTWKEEEEEEEEEGEKRLRLMGNNNGNKRRKG 129

Query: 126 SSVLGLEEIQKHFHIPISEAAKQMNVGLTVLKRRCKQLN------RKLKSLNSLIQD--E 185
           S VLGLEEI+K+FHIPISEAAK+MNVGLTVLKRRC+QLN      RK KSLNSLIQ+  E
Sbjct: 130 SFVLGLEEIRKYFHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKE 189

Query: 186 MGLTNEVKGLEEHKRLMEELPDLDLTHTTKRLRQACFKANYKNKRRIIRSNNIATLHH 194
           MGLTNEVKGLEEHKRL+EE+P++DLTHT KRLRQACFKANYK  RR +RSNNIA+LHH
Sbjct: 190 MGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRR-LRSNNIASLHH 238

[Close]

BLAST of CcUC05G091770 vs. NCBI nr
Match: XP_008466842.1 (PREDICTED: protein RKD4 [Cucumis melo] >ADN33747.1 transcription factor [Cucumis melo subsp. melo])

HSP 1 Score: 217.6 bits (553), Expect = 9.2e-53
Identity = 134/239 (56.07%), Postives = 160/239 (66.95%), Query Frame = 0


Query: 6   NPQSLQN---PLDFDWLQEDLFPFHN------------------------------ILEL 65
           NPQ+L N     DF+WL EDLFP HN                              +LE 
Sbjct: 4   NPQTLHNIIPQFDFEWLHEDLFPLHNELDELPPLDNDELLDVNSRSLLPFHLDDNDVLEF 63

Query: 66  ETEIWTRMIKLEDDERGIREMIERSEFSSSWKEEEE-------EKRLRLLKN---GRRRK 125
           ++E  +R +++ +        IER+ FSS+WKEEEE       EKRLRL+ N    +RRK
Sbjct: 64  DSEFLSRELEMVE--------IERNGFSSTWKEEEEEEEEEEGEKRLRLMGNNNGNKRRK 123

Query: 126 SSSVLGLEEIQKHFHIPISEAAKQMNVGLTVLKRRCKQLN------RKLKSLNSLIQD-- 185
            S VLGLEEI+K+FHIPIS+AAK+MNVGLTVLKRRC+QLN      RK KSLNSLIQ+  
Sbjct: 124 GSFVLGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVK 183

Query: 186 EMGLTNEVKGLEEHKRLMEELPDLDLTHTTKRLRQACFKANYKNKRRIIRSNNIATLHH 194
           EMGLTNEVKGLEEHKRL+EE+P++DLTHT KRLRQACFKANYK  RR +RSNNIA+LHH
Sbjct: 184 EMGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRR-LRSNNIASLHH 233

[Close]

BLAST of CcUC05G091770 vs. NCBI nr
Match: XP_031738302.1 (protein RKD4 [Cucumis sativus])

HSP 1 Score: 202.2 bits (513), Expect = 4.0e-48
Identity = 131/228 (57.46%), Postives = 153/228 (67.11%), Query Frame = 0


Query: 6   NPQSLQN--PLDFDWLQEDLFPFHNILE-------------------LETEIWTRMIKLE 65
           NPQ+  N    DF+WL EDLFPFHN L+                   L   +    +   
Sbjct: 4   NPQTFHNIPQFDFEWLHEDLFPFHNELDELPPLDKDEFLDVNSSGSLLSFHLVDNNVLEF 63

Query: 66  DDERGIREM--IERSEF-SSSWKEEEE-----EKRLRLLKN---GRRRKSSSVLGLEEIQ 125
           + E   REM  IER    SS+WKEEEE     EKRLRL++N    +RRK S VLGLEEI+
Sbjct: 64  ESEFLSREMDEIERKGLPSSTWKEEEEEEEEGEKRLRLMRNNNGNKRRKRSFVLGLEEIK 123

Query: 126 KHFHIPISEAAKQMNVGLTVLKRRCKQLN------RKLKSLNSLIQD--EMGLTNEVKGL 185
           K++HIPISEAAK+MNVGLTVLKRRC+QLN      RKLKS NSLIQ+  EMGLTNEVKGL
Sbjct: 124 KYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGLTNEVKGL 183

Query: 186 EEHKRLMEELPDLDLTHTTKRLRQACFKANYKNKRRIIRSNNIATLHH 194
           EE KRL+ E P++DLTHTTKRLRQACFK  Y+  RR +RSNNIA+LHH
Sbjct: 184 EEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRR-LRSNNIASLHH 230

[Close]

BLAST of CcUC05G091770 vs. NCBI nr
Match: XP_022968161.1 (protein RKD4 [Cucurbita maxima])

HSP 1 Score: 190.3 bits (482), Expect = 1.6e-44
Identity = 127/230 (55.22%), Postives = 156/230 (67.83%), Query Frame = 0


Query: 4   KLNPQSLQNPLDFDWLQEDLFPFH--NILELETEIWT----------------------- 63
           +L P  +    DF+ L     PFH  +I ELE+EI +                       
Sbjct: 31  ELPPLDVDGSFDFNSLS---LPFHWDDISELESEILSLDKHMIPVTPLYEEDMVAVDETK 90

Query: 64  --RMIKLEDDE--RGIREMIERSEFS-SSWKEEEE--EKRLRL-LKNGRRRKSSSVLGLE 123
             RM+KL+DD+  R ++E+    E   S+WKEEEE  EKR+RL ++NGRR+  SSVLGLE
Sbjct: 91  PERMVKLKDDDMSRELQEVTRMIETGLSNWKEEEEECEKRVRLIMRNGRRK--SSVLGLE 150

Query: 124 EIQKHFHIPISEAAKQMNVGLTVLKRRCKQLN------RKLKSLNSLIQD--EMGLTNEV 183
           EIQKHFHIPI+EAAK M+VGLTVLKRRC++LN      RKLKSLNSLI +  EMGLTNE+
Sbjct: 151 EIQKHFHIPITEAAKAMSVGLTVLKRRCRELNIMRWPHRKLKSLNSLITNVQEMGLTNEI 210

Query: 184 KGLEEHKRLMEELPDLDLTHTTKRLRQACFKANYKNKRRIIRSNNIATLH 193
           KGLEEHKRL+EELP++DLTH T+RLRQACFKANYK KRR    +N+A LH
Sbjct: 211 KGLEEHKRLVEELPNMDLTHRTRRLRQACFKANYKKKRR----SNVAVLH 251

[Close]

BLAST of CcUC05G091770 vs. ExPASy Swiss-Prot
Match: Q9LVU8 (Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.3e-22
Identity = 58/115 (50.43%), Postives = 83/115 (72.17%), Query Frame = 0


Query: 76  KNGRRRKSSSVLGLEEIQKHFHIPISEAAKQMNVGLTVLKRRCKQL------NRKLKSLN 135
           K   ++K    L + EI++ F  PI +AAK++NVGLTVLK+RC++L      +RKLKSLN
Sbjct: 137 KRNLKKKRQDKLEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLN 196

Query: 136 SLIQD--EMGLTNEVKGLEEHKRLMEELPDLDLTHTTKRLRQACFKANYKNKRRI 183
           SLI++   +G+  EVK LEEH+ L+E+ PD +L+  TK+LRQACFKANYK ++ +
Sbjct: 197 SLIKNLKNVGMEEEVKNLEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRRKSL 251

[Close]

BLAST of CcUC05G091770 vs. ExPASy Swiss-Prot
Match: Q9M9U9 (Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.0e-17
Identity = 52/116 (44.83%), Postives = 75/116 (64.66%), Query Frame = 0


Query: 84  SSVLGLEEIQKHFHIPISEAAKQMNVGLTVLKRRCKQL------NRKLKSLNSLI----- 143
           S  L  E I  +F++PI++AA+++N+GLT+LK+RC++L      +RKL SL  LI     
Sbjct: 125 SKTLSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKE 184

Query: 144 -------QDEMGLTNEVKGLEEHKRLMEELPDLDLTHTTKRLRQACFKANYKNKRR 182
                  ++E  L N ++ LE+ K+ +E+LPDL     TKRLRQACFKAN+K KRR
Sbjct: 185 LEKMEGEENEDKLRNALEKLEKEKKTIEKLPDLKFEDKTKRLRQACFKANHKRKRR 240

[Close]

BLAST of CcUC05G091770 vs. ExPASy Swiss-Prot
Match: Q9FGD1 (Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.2e-17
Identity = 53/139 (38.13%), Postives = 87/139 (62.59%), Query Frame = 0


Query: 61  SSWKEEEEEKRLRLLKNGRRRKSSSVLGLEEIQKHFHIPISEAAKQMNVGLTVLKRRCKQ 120
           ++ KE+  +KR+ + +  R     + +  E ++++F++PI++AAK++N+G+T+LK+RC++
Sbjct: 133 NTMKEKTSQKRIIMKRRYREDGVINNMSREMMKQYFYMPITKAAKELNIGVTLLKKRCRE 192

Query: 121 L------NRKLKSLNSLIQDEMGLTNEVKG-------------LEEHKRLMEELPDLDLT 180
           L      +RKL SLN+LI +   L    KG             LE  K+++EE+PDL+  
Sbjct: 193 LGIPRWPHRKLTSLNALIANLKDLLGNTKGRTPKSKLRNALELLEMEKKMIEEVPDLEFG 252

[Close]

BLAST of CcUC05G091770 vs. ExPASy Swiss-Prot
Match: Q9CA66 (Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.2e-16
Identity = 55/138 (39.86%), Postives = 85/138 (61.59%), Query Frame = 0


Query: 65  EEEEEKRLRLLKNGRRRKSSS---VLGLEEIQKHFHIPISEAAKQMNVGLTVLKRRCKQL 124
           E   E  +R++ +     +SS    L  E + ++F++PI++AA  +NVGLT+LKRRC++L
Sbjct: 110 ERHREHSVRIISDITTYTTSSAPTTLSKETVSRYFYMPITQAAIALNVGLTLLKRRCREL 169

Query: 125 ------NRKLKSLNSLI------------QDEMGLTNEVKGLEEHKRLMEELPDLDLTHT 182
                 +RKL SLN+LI            ++   L + ++ LE+ KR +E+LPDL+    
Sbjct: 170 GIRRWPHRKLMSLNTLISNVKELQKMEGEENAEKLQDALEMLEKEKRTIEDLPDLEFKDK 229

[Close]

BLAST of CcUC05G091770 vs. ExPASy Swiss-Prot
Match: O81791 (Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.1e-11
Identity = 52/170 (30.59%), Postives = 86/170 (50.59%), Query Frame = 0


Query: 45  DDERGIREMIERSEFSSSWKEE-EEEKRLRLLKNGRRRKSSSV--LGLEEIQKHFHIPIS 104
           + E  + E  E SEF +   E+ E + +  +LK  +R  S  V  L LEE+ K+F + I 
Sbjct: 197 ESEESVNEKTEHSEFENDKTEQSESDAKTEILKKKKRTPSRHVAELSLEELSKYFDLTIV 256

Query: 105 EAAKQMNVGLTVLKRRCKQL------NRKLKSLNSLIQD---------------EMGLTN 164
           EA++ + VGLTVLK++C++       +RK+KSL+ LI D                M +  
Sbjct: 257 EASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDCLIHDLQREAEKQQEKNEAAAMAVAK 316

Query: 165 EVKGLEEHKRLMEELPDLDLTHTTKRLRQACFKANYKNKRRIIRSNNIAT 191
           + + LE  KR + + P +++   TK+ RQ  FK  ++  R      ++ T
Sbjct: 317 KQEKLETEKRNIVKRPFMEIGIETKKFRQENFKKRHRASRAKKNQESLVT 366

[Close]

BLAST of CcUC05G091770 vs. ExPASy TrEMBL
Match: A0A5D3E104 (Protein RKD4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G003820 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.2e-53
Identity = 135/238 (56.72%), Postives = 160/238 (67.23%), Query Frame = 0


Query: 6   NPQSLQN---PLDFDWLQEDLFPFHN------------------------------ILEL 65
           NPQ+L N     DF+WL EDLFP HN                              +LE 
Sbjct: 10  NPQTLHNIIPQFDFEWLHEDLFPLHNELDELPPLDNDELLDVNSRSLLPFHLDDNDVLEF 69

Query: 66  ETEIWTRMIKLEDDERGIREMIERSEFSSSWKEEEE------EKRLRLLKN---GRRRKS 125
           ++E  +R +++ +        IER+ FSS+WKEEEE      EKRLRL+ N    +RRK 
Sbjct: 70  DSEFLSRELEMVE--------IERNGFSSTWKEEEEEEEEEGEKRLRLMGNNNGNKRRKG 129

Query: 126 SSVLGLEEIQKHFHIPISEAAKQMNVGLTVLKRRCKQLN------RKLKSLNSLIQD--E 185
           S VLGLEEI+K+FHIPISEAAK+MNVGLTVLKRRC+QLN      RK KSLNSLIQ+  E
Sbjct: 130 SFVLGLEEIRKYFHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKE 189

Query: 186 MGLTNEVKGLEEHKRLMEELPDLDLTHTTKRLRQACFKANYKNKRRIIRSNNIATLHH 194
           MGLTNEVKGLEEHKRL+EE+P++DLTHT KRLRQACFKANYK  RR +RSNNIA+LHH
Sbjct: 190 MGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRR-LRSNNIASLHH 238

[Close]

BLAST of CcUC05G091770 vs. ExPASy TrEMBL
Match: E5GBA6 (Transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 4.5e-53
Identity = 134/239 (56.07%), Postives = 160/239 (66.95%), Query Frame = 0


Query: 6   NPQSLQN---PLDFDWLQEDLFPFHN------------------------------ILEL 65
           NPQ+L N     DF+WL EDLFP HN                              +LE 
Sbjct: 4   NPQTLHNIIPQFDFEWLHEDLFPLHNELDELPPLDNDELLDVNSRSLLPFHLDDNDVLEF 63

Query: 66  ETEIWTRMIKLEDDERGIREMIERSEFSSSWKEEEE-------EKRLRLLKN---GRRRK 125
           ++E  +R +++ +        IER+ FSS+WKEEEE       EKRLRL+ N    +RRK
Sbjct: 64  DSEFLSRELEMVE--------IERNGFSSTWKEEEEEEEEEEGEKRLRLMGNNNGNKRRK 123

Query: 126 SSSVLGLEEIQKHFHIPISEAAKQMNVGLTVLKRRCKQLN------RKLKSLNSLIQD-- 185
            S VLGLEEI+K+FHIPIS+AAK+MNVGLTVLKRRC+QLN      RK KSLNSLIQ+  
Sbjct: 124 GSFVLGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVK 183

Query: 186 EMGLTNEVKGLEEHKRLMEELPDLDLTHTTKRLRQACFKANYKNKRRIIRSNNIATLHH 194
           EMGLTNEVKGLEEHKRL+EE+P++DLTHT KRLRQACFKANYK  RR +RSNNIA+LHH
Sbjct: 184 EMGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRR-LRSNNIASLHH 233

[Close]

BLAST of CcUC05G091770 vs. ExPASy TrEMBL
Match: A0A1S3CS47 (protein RKD4 OS=Cucumis melo OX=3656 GN=LOC103504148 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 4.5e-53
Identity = 134/239 (56.07%), Postives = 160/239 (66.95%), Query Frame = 0


Query: 6   NPQSLQN---PLDFDWLQEDLFPFHN------------------------------ILEL 65
           NPQ+L N     DF+WL EDLFP HN                              +LE 
Sbjct: 4   NPQTLHNIIPQFDFEWLHEDLFPLHNELDELPPLDNDELLDVNSRSLLPFHLDDNDVLEF 63

Query: 66  ETEIWTRMIKLEDDERGIREMIERSEFSSSWKEEEE-------EKRLRLLKN---GRRRK 125
           ++E  +R +++ +        IER+ FSS+WKEEEE       EKRLRL+ N    +RRK
Sbjct: 64  DSEFLSRELEMVE--------IERNGFSSTWKEEEEEEEEEEGEKRLRLMGNNNGNKRRK 123

Query: 126 SSSVLGLEEIQKHFHIPISEAAKQMNVGLTVLKRRCKQLN------RKLKSLNSLIQD-- 185
            S VLGLEEI+K+FHIPIS+AAK+MNVGLTVLKRRC+QLN      RK KSLNSLIQ+  
Sbjct: 124 GSFVLGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVK 183

Query: 186 EMGLTNEVKGLEEHKRLMEELPDLDLTHTTKRLRQACFKANYKNKRRIIRSNNIATLHH 194
           EMGLTNEVKGLEEHKRL+EE+P++DLTHT KRLRQACFKANYK  RR +RSNNIA+LHH
Sbjct: 184 EMGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRR-LRSNNIASLHH 233

[Close]

BLAST of CcUC05G091770 vs. ExPASy TrEMBL
Match: A0A6J1HU37 (protein RKD4 OS=Cucurbita maxima OX=3661 GN=LOC111467479 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 7.7e-45
Identity = 127/230 (55.22%), Postives = 156/230 (67.83%), Query Frame = 0


Query: 4   KLNPQSLQNPLDFDWLQEDLFPFH--NILELETEIWT----------------------- 63
           +L P  +    DF+ L     PFH  +I ELE+EI +                       
Sbjct: 31  ELPPLDVDGSFDFNSLS---LPFHWDDISELESEILSLDKHMIPVTPLYEEDMVAVDETK 90

Query: 64  --RMIKLEDDE--RGIREMIERSEFS-SSWKEEEE--EKRLRL-LKNGRRRKSSSVLGLE 123
             RM+KL+DD+  R ++E+    E   S+WKEEEE  EKR+RL ++NGRR+  SSVLGLE
Sbjct: 91  PERMVKLKDDDMSRELQEVTRMIETGLSNWKEEEEECEKRVRLIMRNGRRK--SSVLGLE 150

Query: 124 EIQKHFHIPISEAAKQMNVGLTVLKRRCKQLN------RKLKSLNSLIQD--EMGLTNEV 183
           EIQKHFHIPI+EAAK M+VGLTVLKRRC++LN      RKLKSLNSLI +  EMGLTNE+
Sbjct: 151 EIQKHFHIPITEAAKAMSVGLTVLKRRCRELNIMRWPHRKLKSLNSLITNVQEMGLTNEI 210

Query: 184 KGLEEHKRLMEELPDLDLTHTTKRLRQACFKANYKNKRRIIRSNNIATLH 193
           KGLEEHKRL+EELP++DLTH T+RLRQACFKANYK KRR    +N+A LH
Sbjct: 211 KGLEEHKRLVEELPNMDLTHRTRRLRQACFKANYKKKRR----SNVAVLH 251

[Close]

BLAST of CcUC05G091770 vs. ExPASy TrEMBL
Match: A0A0A0L6Q6 (RWP-RK domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G239240 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 5.5e-43
Identity = 127/282 (45.04%), Postives = 152/282 (53.90%), Query Frame = 0


Query: 6   NPQSLQN--PLDFDWLQEDLFPFH-------------------------------NILEL 65
           NPQ+  N    DF+WL EDLFPFH                               N+LE 
Sbjct: 4   NPQTFHNIPQFDFEWLHEDLFPFHNELDELPPLDKDEFLDVNSSGSLLSFHLVDNNVLEF 63

Query: 66  ETEIWTRMI--------------------------------------------------K 125
           E+E  +R +                                                  +
Sbjct: 64  ESEFLSREMDEIERKGLPSSTWKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 123

Query: 126 LEDDERGIREMIERSEFSSSWKEEEEEKRLRLLKN---GRRRKSSSVLGLEEIQKHFHIP 185
            E++E    E  E  E     +EEE EKRLRL++N    +RRK S VLGLEEI+K++HIP
Sbjct: 124 EEEEEEEEEEEEEEEEEEEEEEEEEGEKRLRLMRNNNGNKRRKRSFVLGLEEIKKYYHIP 183

Query: 186 ISEAAKQMNVGLTVLKRRCKQLN------RKLKSLNSLIQD--EMGLTNEVKGLEEHKRL 194
           ISEAAK+MNVGLTVLKRRC+QLN      RKLKS NSLIQ+  EMGLTNEVKGLEE KRL
Sbjct: 184 ISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGLTNEVKGLEEQKRL 243

[Close]

BLAST of CcUC05G091770 vs. TAIR 10
Match: AT5G53040.1 (RWP-RK domain-containing protein )

HSP 1 Score: 107.1 bits (266), Expect = 1.6e-23
Identity = 58/115 (50.43%), Postives = 83/115 (72.17%), Query Frame = 0


Query: 76  KNGRRRKSSSVLGLEEIQKHFHIPISEAAKQMNVGLTVLKRRCKQL------NRKLKSLN 135
           K   ++K    L + EI++ F  PI +AAK++NVGLTVLK+RC++L      +RKLKSLN
Sbjct: 137 KRNLKKKRQDKLEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLN 196

Query: 136 SLIQD--EMGLTNEVKGLEEHKRLMEELPDLDLTHTTKRLRQACFKANYKNKRRI 183
           SLI++   +G+  EVK LEEH+ L+E+ PD +L+  TK+LRQACFKANYK ++ +
Sbjct: 197 SLIKNLKNVGMEEEVKNLEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRRKSL 251

[Close]

BLAST of CcUC05G091770 vs. TAIR 10
Match: AT1G18790.1 (RWP-RK domain-containing protein )

HSP 1 Score: 91.7 bits (226), Expect = 7.1e-19
Identity = 52/116 (44.83%), Postives = 75/116 (64.66%), Query Frame = 0


Query: 84  SSVLGLEEIQKHFHIPISEAAKQMNVGLTVLKRRCKQL------NRKLKSLNSLI----- 143
           S  L  E I  +F++PI++AA+++N+GLT+LK+RC++L      +RKL SL  LI     
Sbjct: 125 SKTLSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKE 184

Query: 144 -------QDEMGLTNEVKGLEEHKRLMEELPDLDLTHTTKRLRQACFKANYKNKRR 182
                  ++E  L N ++ LE+ K+ +E+LPDL     TKRLRQACFKAN+K KRR
Sbjct: 185 LEKMEGEENEDKLRNALEKLEKEKKTIEKLPDLKFEDKTKRLRQACFKANHKRKRR 240

[Close]

BLAST of CcUC05G091770 vs. TAIR 10
Match: AT5G66990.1 (RWP-RK domain-containing protein )

HSP 1 Score: 90.5 bits (223), Expect = 1.6e-18
Identity = 53/139 (38.13%), Postives = 87/139 (62.59%), Query Frame = 0


Query: 61  SSWKEEEEEKRLRLLKNGRRRKSSSVLGLEEIQKHFHIPISEAAKQMNVGLTVLKRRCKQ 120
           ++ KE+  +KR+ + +  R     + +  E ++++F++PI++AAK++N+G+T+LK+RC++
Sbjct: 133 NTMKEKTSQKRIIMKRRYREDGVINNMSREMMKQYFYMPITKAAKELNIGVTLLKKRCRE 192

Query: 121 L------NRKLKSLNSLIQDEMGLTNEVKG-------------LEEHKRLMEELPDLDLT 180
           L      +RKL SLN+LI +   L    KG             LE  K+++EE+PDL+  
Sbjct: 193 LGIPRWPHRKLTSLNALIANLKDLLGNTKGRTPKSKLRNALELLEMEKKMIEEVPDLEFG 252

[Close]

BLAST of CcUC05G091770 vs. TAIR 10
Match: AT1G74480.1 (RWP-RK domain-containing protein )

HSP 1 Score: 86.7 bits (213), Expect = 2.3e-17
Identity = 55/138 (39.86%), Postives = 85/138 (61.59%), Query Frame = 0


Query: 65  EEEEEKRLRLLKNGRRRKSSS---VLGLEEIQKHFHIPISEAAKQMNVGLTVLKRRCKQL 124
           E   E  +R++ +     +SS    L  E + ++F++PI++AA  +NVGLT+LKRRC++L
Sbjct: 110 ERHREHSVRIISDITTYTTSSAPTTLSKETVSRYFYMPITQAAIALNVGLTLLKRRCREL 169

Query: 125 ------NRKLKSLNSLI------------QDEMGLTNEVKGLEEHKRLMEELPDLDLTHT 182
                 +RKL SLN+LI            ++   L + ++ LE+ KR +E+LPDL+    
Sbjct: 170 GIRRWPHRKLMSLNTLISNVKELQKMEGEENAEKLQDALEMLEKEKRTIEDLPDLEFKDK 229

[Close]

BLAST of CcUC05G091770 vs. TAIR 10
Match: AT4G35590.1 (RWP-RK domain-containing protein )

HSP 1 Score: 68.6 bits (166), Expect = 6.5e-12
Identity = 52/170 (30.59%), Postives = 86/170 (50.59%), Query Frame = 0


Query: 45  DDERGIREMIERSEFSSSWKEE-EEEKRLRLLKNGRRRKSSSV--LGLEEIQKHFHIPIS 104
           + E  + E  E SEF +   E+ E + +  +LK  +R  S  V  L LEE+ K+F + I 
Sbjct: 197 ESEESVNEKTEHSEFENDKTEQSESDAKTEILKKKKRTPSRHVAELSLEELSKYFDLTIV 256

Query: 105 EAAKQMNVGLTVLKRRCKQL------NRKLKSLNSLIQD---------------EMGLTN 164
           EA++ + VGLTVLK++C++       +RK+KSL+ LI D                M +  
Sbjct: 257 EASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDCLIHDLQREAEKQQEKNEAAAMAVAK 316

Query: 165 EVKGLEEHKRLMEELPDLDLTHTTKRLRQACFKANYKNKRRIIRSNNIAT 191
           + + LE  KR + + P +++   TK+ RQ  FK  ++  R      ++ T
Sbjct: 317 KQEKLETEKRNIVKRPFMEIGIETKKFRQENFKKRHRASRAKKNQESLVT 366

The following BLAST results are available for this feature:

BLAST of CcUC05G091770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886661.1	3.2e-69	69.66	protein RKD2 [Benincasa hispida]	[more]
TYK29190.1	2.4e-53	56.72	protein RKD4 [Cucumis melo var. makuwa]	[more]
XP_008466842.1	9.2e-53	56.07	PREDICTED: protein RKD4 [Cucumis melo] >ADN33747.1 transcription factor [Cucumis...	[more]
XP_031738302.1	4.0e-48	57.46	protein RKD4 [Cucumis sativus]	[more]
XP_022968161.1	1.6e-44	55.22	protein RKD4 [Cucurbita maxima]	[more]

BLAST of CcUC05G091770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVU8	2.3e-22	50.43	Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1	[more]
Q9M9U9	1.0e-17	44.83	Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1	[more]
Q9FGD1	2.2e-17	38.13	Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1	[more]
Q9CA66	3.2e-16	39.86	Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1	[more]
O81791	9.1e-11	30.59	Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1	[more]

BLAST of CcUC05G091770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E104	1.2e-53	56.72	Protein RKD4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G003820 ...	[more]
E5GBA6	4.5e-53	56.07	Transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3CS47	4.5e-53	56.07	protein RKD4 OS=Cucumis melo OX=3656 GN=LOC103504148 PE=4 SV=1	[more]
A0A6J1HU37	7.7e-45	55.22	protein RKD4 OS=Cucurbita maxima OX=3661 GN=LOC111467479 PE=4 SV=1	[more]
A0A0A0L6Q6	5.5e-43	45.04	RWP-RK domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G239240 PE=4...	[more]

BLAST of CcUC05G091770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53040.1	1.6e-23	50.43	RWP-RK domain-containing protein	[more]
AT1G18790.1	7.1e-19	44.83	RWP-RK domain-containing protein	[more]
AT5G66990.1	1.6e-18	38.13	RWP-RK domain-containing protein	[more]
AT1G74480.1	2.3e-17	39.86	RWP-RK domain-containing protein	[more]
AT4G35590.1	6.5e-12	30.59	RWP-RK domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 111..131
None	No IPR available	PANTHER	PTHR46373:SF2	PROTEIN RKD4	coord: 77..181
IPR003035	RWP-RK domain	PFAM	PF02042	RWP-RK	coord: 88..122 e-value: 1.2E-12 score: 47.6
IPR044607	Transcription factor RKD-like	PANTHER	PTHR46373	PROTEIN RKD4	coord: 77..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G091770.1	CcUC05G091770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity