CcUC05G090360 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G090360
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	MADS-box transcription factor 17-like
Location	CicolChr05: 7996936 .. 8005988 (-)
RNA-Seq Expression	CcUC05G090360
Synteny	CcUC05G090360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTATAAATGTGTGTTTTTTTTTAGTTTTTGTTTCAAAGAATTAGATAAGGGATCGATCATCATGGGAAGGGGAAAAGTAGTGCTTGAGAGAATAGAGAACAAAGTGAATCGTCAAGTTACCTTCTCAAAACGAAGAAATGGGTTATTGAAGAAGGCCTGTGAGCTCTCTGTGCTCTGTGATGTTGATGTTGCTCTCATCGTTTTCTCTAATCGTGGAAAGCTCTTTGAATTTGGCAGTATTGAGTATAATATATTTTTTTTTATTCTCTTCTTTATTTCACTTTAACCCTTTTCTTCTTCTTTTTTTATTTTTTTATTTTTTTATTTTTTTTTCTTTTATTATTTATGGGAATTCATCACTTTCATGATCTCAGCGTGAACAAGATCCTTGAGAGATATCACCAGCGATGTTACAGCTCTGGATCAAGCACCAATCTTGATGAGATTGACATACAGGTTTTCATAAGATTAATTTTTAGTTCAAATAATTGGGAGGTCGATGGCAAAATGTATTTTATTCACTGAGTTAGTACTTATAAGATATAGGGTTGGTTTAAAAGAAAGATTTCGTTTTTTGAATCTGTTAGTGATGATGATGATATACATCTTGGTAATGCAGATAGAGGAAGTGTCAAAGCTGAGAGCCAAATATGAGTCTCTTCAGCGTTCCCATAGGTTATTTAAATTTGATTAGTGAAATCAAGACCTTGTTTTTTAAAATTAATCTGCGTTTAATGTGTGTTTTCTGAATTTGAAGGAACTTTCTTGGAGAAGAACTTGAACCACTGAACCTAAAAGAGTTGCATAATCTTGAGAAACAGTTGGACGAAACTCTTTCACACGCTAGACAGCGGAAGGTAATTCAGGATAACAATTGTTTTTCCTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAAAATTTTTTTTTTTTTTTTTTTTTTTTTATATATATATATATATAAAATTATTCTCTTTATTATGTTGGAATCACTAAATTTCATAACAATAATGAATGATTCTTCTACTGAATAGTGTTTTCTCCGAATTAGAATATTTCGTCTATATTTTCTTGGATCTAATTTTATCAAAAACTCAGATTTGGTCCGACCCAAAATGATTTGATATCTATCACATTTCTGAATTTGCCACTCAATTTTGTAGATTTCTTGATAATAAACGAGTTACCGAAAGAATATGGAAGGGTATTTTCTTTAATTGTTTAGACGTTGTGATTATTTTATGCTCTCATTTTTTTCATACATGAAATGCTTTTCATTGTCAACAATAGTGTAAAGATTAATTGAATCGAAATTCAAAAAGGTATGTCTTTGGTTTTGATACTGATTTAACTAAGCATCAACATATGTTGAAAGTTCTGCCTCCAAATACGTGTGTGTCGTGTTATTTTCAAATGATTTCTAATAAACTGTGCACATATAATTGCAAATCTTATGAATAGAAATAATATTTGAAAAGTATTCATAATAGCGAATTGTTAATTTTATTTTAAAAAGGTTTAAAATTTTAAGTTTATTTGTATTTTAAATGTGAGCAGATAGTTTAGTGGTAATTGACTAAAATTTCAATTCTCCTTACACTATTAATTGTATTAAGAAAATATTTTAGGATTATAAGTTGTTAAATCCCTACTAAATCCTGCGTCTCAAACATTTTTTTTTAAAAAAAGATATAAGTTGGGTCAATAGATGCACTGTGACACATTCTTAGCACTTTCATCATCTCCTATTCATAATCTTCAATGAGTCCAAAAGAGAGAATAACATCTAACAATTTATAAGAGGGCTAGAAATATGCTCAAACAAAATAGAGAAATTAGATGATACAAAATACATTAAGATTAATGACAATGATAGAAGAGTTTATTCTTTGAAGAGTCCATTTCGGTGAGCCCAACAGCCGGTGAGAGCACATACATCTCCCCAAAGATTAGTAGTGCTTCTGTTGACATCTTTAAAAGTACGGTTGTTTCTCTCATTCCATAGAGCCACCGAGTTGAAGACGATGACCCTTTTTCTGGAAGTTAACTTGATCATACATAGGTCTTTACAAAGATCTTTTATGGAGTTATTTCTGTTGTGCCATCCCAAATGATTAGCCACCAAGGCCATAAATTTGTAGTGACTCTCTACAGGGATAAAAAGGTGCTTCATATTTTCATATTATCACCATGATTCTTCCATAATGAGCACCGATTGAGATTAAGCTAAAGATTAGGGAGCTTTTTTTTGCAGCAGCTCCATAGTATTAATGCTTTGGTGAGAGAGTGTAGAGAAAAAAAAATTTACATTTTTTGGGGATGTTGGACTTCCATAGATTCTTGTAAACGTTTGGTTCAAGAGAGGGGGTGTCTCTGATTGACTGTGTGTACTCAGCTTCTTTGATCGACGAAATTTTGAAAGTTCCACTAGTATCAAGTTTCCAGATGGGTCTGTCTATACCTTCGTCATCTTGTGGAGCATTAAGATAGCCTTTGACACTATTCCACTGCACAATCTCTCTATTCCGAAGAGGCCTTCTAGGTTGACCAATCCATAGTTTCATTATTCCATGCTTCCTTAATGGATCCATTCCAAATTTTTTACAATGCAAAAAGCCTTGGAATACTATCAAACAAAGGGCTTTTGTCAGTCCATGATCCTCTCCAAGAAGAAACTTGCTCCCGTTGTTTATCTTCCAAGACATGTTTGCAAACATTATTGGATAGAGTACTCCAACATGGGACTGAATGTAGGGGCGAAAGGATATAGACACAATAAACGTTCGTATGATTTGTCATTATTTATTTTTTTAAGCAAGAAACAGAAGGGAGAAGAGGATAAGAGGTCAACTATGTTAGACACAGTCTGAGTACCCTCGCCACCCCTCATGTCCAAAAGTAGATTTATTAATAAAGAACCAAGTGTTTAACAGTACAAACAGAGAAAAGATCAAGACCCCTTTACGGAACTGAAACGGAGATTCCAGGATTTTTGCCGACTCAGGCGGGTAGTCCTTATTAGTCAAGCTTTGGCTCCCGAACGGGAACTGGATCCGTCCAAAGGGAAACGGATTCTCAATCTCAATCAGCTCCCCCGGGATCGAAATCCGATCTCTCACTTCCGACGATCTAATTTTCTTTGCTGAAGCTAGTCAGAAAAGCTCTCCAATTAGGTGCAATATATACTTTTTTAATAATACACGAGGCAACGAAGATCAGTAGATGCACTAAAATATCTATCAACTAGGTTAAAACAGCCCTATCATCCTCATCATGCCCAGAACCAAAAACTTGCATCAATCAATTAGGCGCAGTAGATGAAATATCATAGTTATAAAAAACGCTTGATTTAGAGCACCAATTGGTAGCGGCAATTGTAATATCTTCCCAAAGAGTACGAGATGATTTAGATTTTCTGCGGTTGTACCGCACTATATTCAAGTTGTCATTGTACTTTAACATTACACTTTTTTTGAATAAAATACTAAAGGAGAAAAGGTTCAGGGTGTCCACTGGAACATTTTAATTAGGTTGAATTATCCCTTAGCACCCTCATCATGACCCCAGACTGTTCAGTTTCTATGACTTGTTAATATTACATAAATCGTCGCCACCTAGATGACATAAAGTTGATTAGATATTGTATATTAAGATATTAAATGGTTGTGATAGTAACCCGTCATAGAATCAAACAGACTCGAGTATGGATGAGTTTTTTTTTTACAGAAGGATATCATAGAAAGTGAATTTCTCAACTAAGTTAACTCATTCGTAGTACCCATTATTGAATGAGTTCAATTATATATAAATTTGATCATTAAGTATTTAAGATTATGTGTTTAATGGAATCTCTAATTTTTTCAAAAAAAAAAAAAACAATAATAATGATAAAATTTCATGAACTTTGATTGTGTCTATCTTTGTCCTTAAAAAAAGAAAAATTCAAATGAGTTTGACACCACCAAATAGACAGACTTAAAAGTTTAGAGACGAAAACTTATATAATGTGTATACATATCAATTGAGATGGATGTTAATGATAAGACATTACTGTGTTTGTTGTTAATGGCAGGCTGAGATAATGCTTCAAAAATTAGCAGACTTACGCCAAATGGTAAGAAAAACCATTTACGTACAAAATATGATATCAACGGTTATTATACACATTAACATAGAGACATAATGTGTACATTTTTAGGCACGTTTATAATATTCTCAATTTTAATTTTTTTTGAAAGAAAAATAAAATTATATATGATAATTATTTCTTAGGAATATTTTTAAAATAAAAAAACTAGTTGAAAATAATTACAAGTAAAGCAAAATTTTTCACCACAAATGAGATTCCAAAGAACATCTTTTGGAGCAATTTATTAGGGGTCGTTTTATGGTGCATATGGCTGGAGTTTAACAGCCGCATTTTCAAAGATGCTAATAAATCCGTAGCCTATCTTTGGGAGGAGATCTTAAATTTGATTGCTCTTTGGCGTTCCAAATCTTCTCTCTTTCGTAATTATAGCGTTTCTAATATTTCTCTAAACTTGAAGGCATTTCTATAGCCAATCTGTTGTTGTATTACTTCATCTTTTGAGCTGCCTTTTAGCTCCCTTTGTAATTGTACATTCTTTTGATGATCAATACAACTTGTATGTCGGGGTGTGATGAGAGTACTAAGAAGGTGTCAACCTAGTTAAGATGTTCTGGTGCACTCCCTGATCCCTCTACCTTTAGTATTATGTTAAAAAATGTATATATGTAGCAAAATTCTACTTTTTATATATTTTGATAGACTGCGATAGACCCAAATAAATATTTATTACTTTATCAAATAGACATAGATACATATCTATCACATATAAAAAGTAAAATTTTATTATATTTGTAAATAGTTTGATATTTTTTCTATTTATAATATTTTTTCTATATCTTATTTTATATATATATATATATATATATATATTTCTTTCTTTTTTTTTCTTTCAAAATTCAAAATAAAAATGTTTTACATGATAATTTGTTTTAAAAATAAAATAGTTAAAATTAATATGTTGCATTTATTATTATTATTTTTTATATTGTAATGCACTTTATAAAGTAAAAAAGAAAATTTGTTTTTACTTATGTTGAAAGAAAAAGTTAGAAATACAAGAAACTAGACTTTTGGTGTTTTCGATATAATTACGGAAGTTTCTTAACAAAAGGAAACAAGATTGTCAACAAGAAATACATATGATTTACCAAATGCTAATATTTTTTTAAAAGAATAATAATAACAATAACAAATATTATCAAAATAGACACATAATTAGTATTTATCTTACAAGAAAATTATCATTGCTACATTCATTATGGAAAAATGGCGCAATAAAACCTTCACACCGACACAGCAGCTTGAACTGGGAAGTGAACCCTTGATTTTAATATGAACTAGTGGACATATATTATTAGAAATTCAATATAATGTTGGGAATTCCCTTGTTACGTAGCATTACTATAGAATAATTGTTTATTATTCAAACACTTAATCATCTAAATTGTTTTGCGTTGACTGGAGTTTAATAATTGTACTTTGTATTATTGTATTACAGTGTTAAACCTAACATTACTATAGAATATTCTACAATATTATATGTTTAATTTGAAGAAAAAAATCAAATTCATAATCATGCAGAAAGAGATGAAATCAAAAGAAAATAATGTAATGTTTGGATAAATTTATGAATTGATAAGATAATAGTATGGTGCGATCCAATTGAAATGAAATTTAAGAATAAGGATTTTTTTTTTCTTTTTGAGACATACAGGAGCAGGACCTTGGAGATCAAAATACTCAGCTCAAGTCAAAGGTTCCTTTTTATCCTCGTCCATCGATATACATGCTTAAGTTTTAATTATAATTTTTTTTTTCTTTTTAAGATATAGAAATTTATCTTCAACTTACTTTTTGTCATTTTAAACTTAATATCATACCTTTTAGTTTAAGCATTTTCTAAAACATTTTCAATGCGAATCTTTCATCTACCTTTCAAGCCTCCTTTCAAAAAGAAATCTTAAATTAAGCTAATCTTTTTAAGTTGCTTTTAACTCATCCAGACTTTTTTCTCAATAAATCATCTAAATTTATTATTCAAAAAAATTATACTAACTAAGCAAGTTGCACATTTTAAACTATTTAATTCCTTTCTTTCTTTTTTTTTTTTTATAGAGATATGAAATGAGTCATTAGGTGCAATCCAACATTTCTATTACTAGACATATTTTTAACACCCTGATCATCTTATTTTACGGCTATATTAAACTATTGAATTTCTTTCTAGGATATTTCTTTTTAATCGAAAAATTGATTTAGTTTCAAAACCATTTTTGTAAAGTATTATTCCAAACCCACACTATTCGTTTATTTGGAAAGATGGACAAGATGATGGATAAAGGAAATCAATGATAAGGAGATTGGTAATTAAGTTGGAAGAGACTACTGAACAACACAAAAAGCCTAAATTATTGAGTTGTTTGAAAAATATATTTTTTTAAAAATTAATGAGTTGTTAGTGTAAATTTGATTATATTAATATATATAATTTTAAGGAAAAATTTTTTCTGTCACCCGTATATGATGCAGCCCTCTAATGAACCCAATTAAAAACTGTCACATGATAGTTTACTCTTTTAAAAAAATATTATTAATTTTTATTTTATTTTATTTATGTCTAGTAAAAAGAAGAGTATTTGCTCACTCTTAATATTGATCCTTTCATTTGTGTACTTGGAAATTTAGTAGAAAGTTCTCTCTAAATGTGGAAATCTCTATAGAAACACATAATCTAATGCTATAATACTATGTTAAATCACCACTTAAATTTAAAAAGATTTAAGGTAATGGATATTTAACATTTAATAGTAATTCTATAGTAAAAATTGTTAAATTACATAGTTGGTTTTTAAACTTTAAATTCTGTATCTATTTTAGTAAACTTTTTAAAAATTATTAATTTAGCTTTCGAACTCTTAATTTTATTTTAATTATGGATCTAGTGGAAAAAAATTGAAAGTTTTTTAATACAAATAAAATTCAAATTTACCTTAAAAAAAAGATTAAGTTTGTCATGCTATTAAATTGTACAAAGTTGGATTGAAGCACGCTCTCAGTGCGCTTTAAATAAGGGCTCCTTGCTTGGTAGCCCTCACATGTTTCTAGAAAGCATGCTTATAAGCTAGAAGCACTTTTAAAAACACTTTCTATTAAAGACGTTAAAGGAAATGCATATAGGGTAGGTATTAGAGAGATAAAGATGTCTAGAGTGAGTGACTTGTTACTTATTCGATAAAGAAAAATGTTAGTAAGGGACATAAAAATTAGATAGAGATTGAGCTTGAAATATAAATAATCTAAGAAAAGATAAAACTCAAGGACTAATTAGCTTGAACCCTTCTAATTTCATAAACTACGTAGTAGGATAAATGCAATCTAATTTGTTCAACTTTAGTAGAACGCAACTCAAGGTTTTTTTCTTTCGATGAAGACTCTCATACACCCTACATAGTTATTGAAACTAAACAAAATCATTGAAATTAAACTTGAAGTTAGGGCATGATGAAATTTTAAAATGAATCTAAAATAGATAATACATAAGCCAAGCATGATGACAAATTAGACAAACTTAATAACAAACAATAAGCATAGAGATAGAGACATAGAAGTTGGTAATCTAATTTGGTACAATAACACCTACTCTGAGGACAATTACAATTTAGTACTTCATCTGTTAGACTCCCTCTATAGTGACTTATCTACAACTCAACCTCTTTAATTAGTTTCAACTTAGACTCCCCTAAGTGTTTGAGATTTCTTCACGTCCACAAAAATGCTTTTTCTAAGCTTTGCATGACTCTCAAACAAAACGTACTTATGCTCCCCTTAAACATGAGCTTTTCTCACCTTTATGAAATAGTTTCTCTCAAGCTAAGTATGAGATCCCTTCAATACAAAAGAACTTAAGCTTTTTCTAGGTGTGTAATACACTCTTTTTCACTTATCGTGAATGACAATAGTTATAAACATTTCAGCCTAGTCTAAATGACTATCAACAATCCCCTCAACAACTAGGTTCACTAATAGTACATAAAAATCCTTAACATGCACAATCCAAGAAAAAACATAACACCACAAATCTTATTCAAAGAGACTAACCCTAAAAGAGATAAAAGCCACACAACACAACCTTGAGAATAATCTTTTCTGCAAGAAAAGGAAAGCAGCTCCTGTGGATGCACTGCAATAACAAATAAAGAAAAAATATTTCCACAGATTCTGCACAACATCAGAACAATATGCTTGACATCTTTCAAGACAAGTTACACAATATTCTGCCTGTAATAAAATCAGCCACTATTCAGTATCACATGAGTTTATAATTATTGAACAATATATAACCAAACAAAAGTTTTTGGCAACAGCTGGAAGAAGAACAACAATGTATGCAAGAAAAGGAAGGTGGCGAAGAAGATCATCCAATGAATTACGAAGTTGTGGGAGCTGACCCAAACATGAACACCACGAGGTACTCTTTACTTACGAACAAATATTAAAGATATATGTATATGATTCTTTATAATTTGAGAAGTTTTAATTAAGCTGTTAATATGGTTATTAGGTAGCCTAGCCAAAATGATTGTCTTGGGTTTGGTCTGTGCATGTTAATGAAAATTAAAACACACAGGTACTTTGATCCCCAAGAAGAAGAAGAAGAGGGCAGGGCCATGATAGAAGCAGGGAATAATGACTTAATCCCAGATTGGCTACTTTGATTCACATATCTATATGGATATATATGCTCCCCTAATTTTTATTTTCTCTATTATTCTTCACAAATAAGGATCATGATGGGGGAACCTTTGGACATCATATTCTAT

mRNA sequence

CTTTATAAATGTGTGTTTTTTTTTAGTTTTTGTTTCAAAGAATTAGATAAGGGATCGATCATCATGGGAAGGGGAAAAGTAGTGCTTGAGAGAATAGAGAACAAAGTGAATCGTCAAGTTACCTTCTCAAAACGAAGAAATGGGTTATTGAAGAAGGCCTGTGAGCTCTCTGTGCTCTGTGATGTTGATGTTGCTCTCATCGTTTTCTCTAATCGTGGAAAGCTCTTTGAATTTGGCAGTATTGACGTGAACAAGATCCTTGAGAGATATCACCAGCGATGTTACAGCTCTGGATCAAGCACCAATCTTGATGAGATTGACATACAGATAGAGGAAGTGTCAAAGCTGAGAGCCAAATATGAGTCTCTTCAGCGTTCCCATAGGAACTTTCTTGGAGAAGAACTTGAACCACTGAACCTAAAAGAGTTGCATAATCTTGAGAAACAGTTGGACGAAACTCTTTCACACGCTAGACAGCGGAAGGCTGAGATAATGCTTCAAAAATTAGCAGACTTACGCCAAATGGAGCAGGACCTTGGAGATCAAAATACTCAGCTCAAGTCAAAGCTGGAAGAAGAACAACAATGTATGCAAGAAAAGGAAGGTGGCGAAGAAGATCATCCAATGAATTACGAAGTTGTGGGAGCTGACCCAAACATGAACACCACGAGGTACTTTGATCCCCAAGAAGAAGAAGAAGAGGGCAGGGCCATGATAGAAGCAGGGAATAATGACTTAATCCCAGATTGGCTACTTTGATTCACATATCTATATGGATATATATGCTCCCCTAATTTTTATTTTCTCTATTATTCTTCACAAATAAGGATCATGATGGGGGAACCTTTGGACATCATATTCTAT

Coding sequence (CDS)

ATGGGAAGGGGAAAAGTAGTGCTTGAGAGAATAGAGAACAAAGTGAATCGTCAAGTTACCTTCTCAAAACGAAGAAATGGGTTATTGAAGAAGGCCTGTGAGCTCTCTGTGCTCTGTGATGTTGATGTTGCTCTCATCGTTTTCTCTAATCGTGGAAAGCTCTTTGAATTTGGCAGTATTGACGTGAACAAGATCCTTGAGAGATATCACCAGCGATGTTACAGCTCTGGATCAAGCACCAATCTTGATGAGATTGACATACAGATAGAGGAAGTGTCAAAGCTGAGAGCCAAATATGAGTCTCTTCAGCGTTCCCATAGGAACTTTCTTGGAGAAGAACTTGAACCACTGAACCTAAAAGAGTTGCATAATCTTGAGAAACAGTTGGACGAAACTCTTTCACACGCTAGACAGCGGAAGGCTGAGATAATGCTTCAAAAATTAGCAGACTTACGCCAAATGGAGCAGGACCTTGGAGATCAAAATACTCAGCTCAAGTCAAAGCTGGAAGAAGAACAACAATGTATGCAAGAAAAGGAAGGTGGCGAAGAAGATCATCCAATGAATTACGAAGTTGTGGGAGCTGACCCAAACATGAACACCACGAGGTACTTTGATCCCCAAGAAGAAGAAGAAGAGGGCAGGGCCATGATAGAAGCAGGGAATAATGACTTAATCCCAGATTGGCTACTTTGA

Protein sequence

MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIVFSNRGKLFEFGSIDVNKILERYHQRCYSSGSSTNLDEIDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLKELHNLEKQLDETLSHARQRKAEIMLQKLADLRQMEQDLGDQNTQLKSKLEEEQQCMQEKEGGEEDHPMNYEVVGADPNMNTTRYFDPQEEEEEGRAMIEAGNNDLIPDWLL

Homology

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BLAST of CcUC05G090360 vs. NCBI nr
Match: XP_038886448.1 (agamous-like MADS-box protein MADS3 [Benincasa hispida])

HSP 1 Score: 405.2 bits (1040), Expect = 3.7e-109
Identity = 211/231 (91.34%), Postives = 221/231 (95.67%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIVFSNRGKLFEFGSI 60
           MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALI+FS+RGKLFEFGS 
Sbjct: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSSRGKLFEFGST 60

Query: 61  DVNKILERYHQRCYSSGSSTNLDEIDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           D+NKILERYHQRCYSSGSSTNLDE DIQIEEV+KLRAKYESL+RS+RNFLGEELEPLNLK
Sbjct: 61  DMNKILERYHQRCYSSGSSTNLDESDIQIEEVAKLRAKYESLRRSNRNFLGEELEPLNLK 120

Query: 121 ELHNLEKQLDETLSHARQRKAEIMLQKLADLRQMEQDLGDQNTQLKSKLEEEQQCMQEKE 180
           ELHNLEKQLD+TLSH RQRKAEIMLQKLADLR+MEQDLGDQNTQLKSKLEEEQQCMQEKE
Sbjct: 121 ELHNLEKQLDKTLSHTRQRKAEIMLQKLADLRKMEQDLGDQNTQLKSKLEEEQQCMQEKE 180

Query: 181 GGEEDHPMNYEVVGADPNMNTTRYFDPQEEEEEGRAMIEAGNNDLIPDWLL 232
            GEED PMNY++VGADPNMN  RYFDPQ  EEEGR MIEAGNNDLIPDWLL
Sbjct: 181 DGEED-PMNYKLVGADPNMNIPRYFDPQ--EEEGRGMIEAGNNDLIPDWLL 228

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BLAST of CcUC05G090360 vs. NCBI nr
Match: XP_008439145.1 (PREDICTED: MADS-box transcription factor 17-like [Cucumis melo])

HSP 1 Score: 360.9 bits (925), Expect = 8.1e-96
Identity = 199/238 (83.61%), Postives = 216/238 (90.76%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIVFSNRGKLFEFGSI 60
           MGRGKVVLERIEN+VNRQVTFSKRRNGLLKKA ELSVLCDVDVALI+FS RGKLFEFGS 
Sbjct: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60

Query: 61  DVNKILERYHQRCYSSGSSTNLDEIDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           D+NKILERYHQ+CY+SGS+TNLDE DIQIEEVSKLRAKYESLQRS+RNFLGEELEPL+LK
Sbjct: 61  DMNKILERYHQQCYTSGSTTNLDESDIQIEEVSKLRAKYESLQRSYRNFLGEELEPLSLK 120

Query: 121 ELHNLEKQLDETLSHARQRKAEIMLQKLADLRQMEQDLGDQNTQLKSKLE--EEQQCMQE 180
           ELHNLEKQLD+TLS ARQRKAEIMLQKLADL +MEQDLGDQN QLKSKLE  ++QQC+QE
Sbjct: 121 ELHNLEKQLDKTLSQARQRKAEIMLQKLADLHKMEQDLGDQNNQLKSKLEKDQDQQCVQE 180

Query: 181 KEGGEEDHPMNYEVVGA-DPNM-NTTRYFDPQEEEEEG---RAMIEAGNNDLIPDWLL 232
           +EGGEED P NYEVV A DPNM NTTRYF+ QEEEEE    R MI+ G+N LIPDWLL
Sbjct: 181 QEGGEED-PKNYEVVRADDPNMVNTTRYFEAQEEEEEEEECRGMIDGGSN-LIPDWLL 236

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BLAST of CcUC05G090360 vs. NCBI nr
Match: XP_011651126.1 (agamous-like MADS-box protein MADS3 [Cucumis sativus] >KAE8650443.1 hypothetical protein Csa_009943 [Cucumis sativus])

HSP 1 Score: 360.1 bits (923), Expect = 1.4e-95
Identity = 196/233 (84.12%), Postives = 213/233 (91.42%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIVFSNRGKLFEFGSI 60
           MGRGKVVLERIEN+VNRQVTFSKRRNGLLKKA ELSVLCDVDVALI+FS RGKLFEFGS 
Sbjct: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60

Query: 61  DVNKILERYHQRCYSSGSSTNLDEIDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           D+NKILERYHQ+CY+SGS+TNLDE D+QIEEVSKLRAKYESLQRSHRNFLGEELEPL LK
Sbjct: 61  DMNKILERYHQQCYTSGSTTNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLTLK 120

Query: 121 ELHNLEKQLDETLSHARQRKAEIMLQKLADLRQMEQDLGDQNTQLKSKLEEEQQCMQEKE 180
           ELHNLEKQLD+TLS ARQRKAEIMLQKLADLR+MEQDLGDQNTQLKSKLE++    QE+E
Sbjct: 121 ELHNLEKQLDKTLSQARQRKAEIMLQKLADLRKMEQDLGDQNTQLKSKLEKD----QEQE 180

Query: 181 GGEEDHPMNYEVVGA-DPNM-NTTRYFDPQEEEEEGRAMIEAGNNDLIPDWLL 232
           GGEED P NYEVV A DPNM NTTRY++ QEEEEE R +I+ G+N LIPDWLL
Sbjct: 181 GGEED-PKNYEVVRADDPNMINTTRYYEAQEEEEECRGVIDGGSN-LIPDWLL 227

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BLAST of CcUC05G090360 vs. NCBI nr
Match: XP_022141193.1 (MADS-box transcription factor 6-like [Momordica charantia])

HSP 1 Score: 328.9 bits (842), Expect = 3.4e-86
Identity = 178/220 (80.91%), Postives = 197/220 (89.55%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIVFSNRGKLFEFGSI 60
           MGRGKVVLERIENKVNRQVTFSKRRNGLLKKA ELSVLCDVDVALI+F +RGKLFEF S 
Sbjct: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60

Query: 61  DVNKILERYHQRCYSSGSSTNLDEIDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           D+NKILERYHQRCYSSGS++NLDE D+QIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK
Sbjct: 61  DMNKILERYHQRCYSSGSTSNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120

Query: 121 ELHNLEKQLDETLSHARQRKAEIMLQKLADLRQMEQDLGDQNTQLKSKLEEEQQCMQEKE 180
           ELHNLEKQLD+TLS ARQRKAEIMLQ+LA+LR+MEQDLGDQNT+LKSKLEE Q+ +Q+ E
Sbjct: 121 ELHNLEKQLDKTLSQARQRKAEIMLQRLAELRKMEQDLGDQNTELKSKLEEGQRRLQQSE 180

Query: 181 GGE---EDHPMNYEVVGADPNMNTTRYFDPQEEEEEGRAM 218
            G+   E+   NYEVVG +PNM ++R FD QEEEE   AM
Sbjct: 181 DGQGDPEEQVPNYEVVGEEPNM-SSRCFDVQEEEEARAAM 219

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BLAST of CcUC05G090360 vs. NCBI nr
Match: XP_022922550.1 (MADS-box transcription factor 6-like [Cucurbita moschata])

HSP 1 Score: 276.9 bits (707), Expect = 1.5e-70
Identity = 156/230 (67.83%), Postives = 178/230 (77.39%), Query Frame = 0


Query: 2   GRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIVFSNRGKLFEFGSID 61
           G+GKVV+ERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALI+FS+RGKLFEFGS D
Sbjct: 15  GKGKVVVERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIMFSSRGKLFEFGSTD 74

Query: 62  VNKILERYHQRCYSSGSSTNLDEIDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLKE 121
           +NKILERYH RCY++GS+TNL    +QIEEVSKLRAKYESLQRSHRN +GEELE L++KE
Sbjct: 75  MNKILERYHHRCYNTGSTTNLHHTHVQIEEVSKLRAKYESLQRSHRNLVGEELEALSIKE 134

Query: 122 LHNLEKQLDETLSHARQRKAEIMLQKLADLRQMEQDLGDQNTQLKSKLEEEQQCMQEKEG 181
           LH LEKQLD+TLS  R RK EIMLQK+AD R+MEQ+LGD NTQLKSK+ E Q+CMQ+ E 
Sbjct: 135 LHTLEKQLDKTLSQTRHRKVEIMLQKIADTRKMEQELGDVNTQLKSKV-EGQECMQQNE- 194

Query: 182 GEEDHPMNYEVVGADPNMNTTRYFDPQEEEEEGRAMIEAGNNDLIPDWLL 232
                                     QEEEEEG AM+    + LIPD +L
Sbjct: 195 -------------------------EQEEEEEG-AML--AGSSLIPDCVL 214

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BLAST of CcUC05G090360 vs. ExPASy Swiss-Prot
Match: Q8LLR1 (Agamous-like MADS-box protein MADS3 OS=Vitis vinifera OX=29760 GN=MADS3 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 4.4e-52
Identity = 121/246 (49.19%), Postives = 160/246 (65.04%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIVFSNRGKLFEFGSI 60
           MGRG+V L+RIENK+NRQVTFSKRRNGLLKKA ELSVLCD +VALI+FS+RGKL+EFGS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  DVNKILERYHQRCYSSGSSTNLDEIDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
              K LERY + CY+   +    E     +EVSKL+AKYESLQR+ R+ LGE+L PL++K
Sbjct: 61  GTTKTLERYQRVCYTPQDNNMECETQSWYQEVSKLKAKYESLQRTQRHLLGEDLGPLSVK 120

Query: 121 ELHNLEKQLDETLSHARQRKAEIMLQKLADLRQMEQDLGDQNTQLKSKLEEEQQCMQEKE 180
           EL NLEKQL+  L+ ARQRK ++M++++ DLR+ E+ LGD N QLK KLE E Q ++  +
Sbjct: 121 ELQNLEKQLEGALAQARQRKTQMMIEQMEDLRRKERQLGDLNKQLKLKLEAEGQSLKAIQ 180

Query: 181 GGEED------------HPMNYEVVGADPN---MNTTRYFDPQEEEEEGRAMIEAGNNDL 232
           G                HP     +  +P         ++ P E     ++M  AG ++ 
Sbjct: 181 GSWNPSTATAGNSSFPVHPSQSNPMDCEPEPILQIGYHHYVPAEGPSVSKSM--AGESNF 240

[Close]

BLAST of CcUC05G090360 vs. ExPASy Swiss-Prot
Match: Q6EU39 (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS6 PE=1 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 7.0e-50
Identity = 106/173 (61.27%), Postives = 136/173 (78.61%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIVFSNRGKLFEFGSI 60
           MGRG+V L+RIENK+NRQVTFSKRRNGLLKKA ELSVLCD +VALI+FS+RGKL+EFGS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  DVNKILERYHQRCYSSGSSTN-LDEIDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNL 120
            + K LERY   CY++  S N L E      E+SKL+AK+E+LQR+ R+ LGE+L PL++
Sbjct: 61  GITKTLERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSV 120

Query: 121 KELHNLEKQLDETLSHARQRKAEIMLQKLADLRQMEQDLGDQNTQLKSKLEEE 173
           KEL  LEKQL+  LS ARQRK ++M++++ +LR+ E+ LG+ N QLK KLE E
Sbjct: 121 KELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKLEVE 173

[Close]

BLAST of CcUC05G090360 vs. ExPASy Swiss-Prot
Match: Q7XUN2 (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS17 PE=1 SV=2)

HSP 1 Score: 196.8 bits (499), Expect = 2.7e-49
Identity = 107/175 (61.14%), Postives = 140/175 (80.00%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIVFSNRGKLFEFGSI 60
           MGRG+V L+RIENK+NRQVTFSKRRNGLLKKA ELSVLCD +VALI+FS+RGKL+EFGS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  DVNKILERYHQRCYSS-GSSTNL--DEIDIQIEEVSKLRAKYESLQRSHRNFLGEELEPL 120
            +NK LE+Y+  CY++ GS++ L   E     +E+S+L+ K E LQRS R+ LGE+L PL
Sbjct: 61  GINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPL 120

Query: 121 NLKELHNLEKQLDETLSHARQRKAEIMLQKLADLRQMEQDLGDQNTQLKSKLEEE 173
           ++KEL  LEKQL+ +LS ARQRK +IM++++ DLR+ E+ LG+ N QLK+KLE E
Sbjct: 121 SIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKLEAE 175

[Close]

BLAST of CcUC05G090360 vs. ExPASy Swiss-Prot
Match: P29386 (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana OX=3702 GN=AGL6 PE=1 SV=2)

HSP 1 Score: 189.5 bits (480), Expect = 4.2e-47
Identity = 101/174 (58.05%), Postives = 134/174 (77.01%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIVFSNRGKLFEFGSI 60
           MGRG+V ++RIENK+NRQVTFSKRRNGLLKKA ELSVLCD +VALI+FS+RGKL+EFGS+
Sbjct: 1   MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV 60

Query: 61  DVNKILERYHQRCYSSGSSTNLDEIDIQ--IEEVSKLRAKYESLQRSHRNFLGEELEPLN 120
            +   +ERY+ RCY+   S N  E   Q   +EV+KL++KYESL R++RN LGE+L  + 
Sbjct: 61  GIESTIERYN-RCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMG 120

Query: 121 LKELHNLEKQLDETLSHARQRKAEIMLQKLADLRQMEQDLGDQNTQLKSKLEEE 173
           +KEL  LE+QL+  L+  RQRK ++M++++ DLR+ E+ LGD N QLK K E E
Sbjct: 121 VKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKFETE 173

[Close]

BLAST of CcUC05G090360 vs. ExPASy Swiss-Prot
Match: Q39685 (MADS-box protein CMB1 OS=Dianthus caryophyllus OX=3570 GN=CMB1 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 3.1e-42
Identity = 102/173 (58.96%), Postives = 126/173 (72.83%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIVFSNRGKLFEFGSI 60
           MGRG+V L+RIENK+NRQVTF+KRRNGLLKKA ELSVLCD +VALIVFSNRGKL+EF S 
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCST 60

Query: 61  D-VNKILERYHQRCYSS-GSSTNLDEIDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLN 120
             +NK LERY +  Y S  +S    E +   +E  KL+AK + LQRSHRN LGE+L  L+
Sbjct: 61  SCMNKTLERYQRCSYGSLETSQPSKETESSYQEYLKLKAKVDVLQRSHRNLLGEDLGELS 120

Query: 121 LKELHNLEKQLDETLSHARQRKAEIMLQKLADLRQMEQDLGDQNTQLKSKLEE 172
            KEL  LE QLD++L   R  K + ML +LADL++ E+ L + N  LK+KLEE
Sbjct: 121 TKELEQLEHQLDKSLRQIRSIKTQHMLDQLADLQKKEEMLFESNRALKTKLEE 173

[Close]

BLAST of CcUC05G090360 vs. ExPASy TrEMBL
Match: A0A1S3AY43 (MADS-box transcription factor 17-like OS=Cucumis melo OX=3656 GN=LOC103484028 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.9e-96
Identity = 199/238 (83.61%), Postives = 216/238 (90.76%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIVFSNRGKLFEFGSI 60
           MGRGKVVLERIEN+VNRQVTFSKRRNGLLKKA ELSVLCDVDVALI+FS RGKLFEFGS 
Sbjct: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60

Query: 61  DVNKILERYHQRCYSSGSSTNLDEIDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           D+NKILERYHQ+CY+SGS+TNLDE DIQIEEVSKLRAKYESLQRS+RNFLGEELEPL+LK
Sbjct: 61  DMNKILERYHQQCYTSGSTTNLDESDIQIEEVSKLRAKYESLQRSYRNFLGEELEPLSLK 120

Query: 121 ELHNLEKQLDETLSHARQRKAEIMLQKLADLRQMEQDLGDQNTQLKSKLE--EEQQCMQE 180
           ELHNLEKQLD+TLS ARQRKAEIMLQKLADL +MEQDLGDQN QLKSKLE  ++QQC+QE
Sbjct: 121 ELHNLEKQLDKTLSQARQRKAEIMLQKLADLHKMEQDLGDQNNQLKSKLEKDQDQQCVQE 180

Query: 181 KEGGEEDHPMNYEVVGA-DPNM-NTTRYFDPQEEEEEG---RAMIEAGNNDLIPDWLL 232
           +EGGEED P NYEVV A DPNM NTTRYF+ QEEEEE    R MI+ G+N LIPDWLL
Sbjct: 181 QEGGEED-PKNYEVVRADDPNMVNTTRYFEAQEEEEEEEECRGMIDGGSN-LIPDWLL 236

[Close]

BLAST of CcUC05G090360 vs. ExPASy TrEMBL
Match: A0A6J1CJS1 (MADS-box transcription factor 6-like OS=Momordica charantia OX=3673 GN=LOC111011649 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.7e-86
Identity = 178/220 (80.91%), Postives = 197/220 (89.55%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIVFSNRGKLFEFGSI 60
           MGRGKVVLERIENKVNRQVTFSKRRNGLLKKA ELSVLCDVDVALI+F +RGKLFEF S 
Sbjct: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60

Query: 61  DVNKILERYHQRCYSSGSSTNLDEIDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           D+NKILERYHQRCYSSGS++NLDE D+QIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK
Sbjct: 61  DMNKILERYHQRCYSSGSTSNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120

Query: 121 ELHNLEKQLDETLSHARQRKAEIMLQKLADLRQMEQDLGDQNTQLKSKLEEEQQCMQEKE 180
           ELHNLEKQLD+TLS ARQRKAEIMLQ+LA+LR+MEQDLGDQNT+LKSKLEE Q+ +Q+ E
Sbjct: 121 ELHNLEKQLDKTLSQARQRKAEIMLQRLAELRKMEQDLGDQNTELKSKLEEGQRRLQQSE 180

Query: 181 GGE---EDHPMNYEVVGADPNMNTTRYFDPQEEEEEGRAM 218
            G+   E+   NYEVVG +PNM ++R FD QEEEE   AM
Sbjct: 181 DGQGDPEEQVPNYEVVGEEPNM-SSRCFDVQEEEEARAAM 219

[Close]

BLAST of CcUC05G090360 vs. ExPASy TrEMBL
Match: A0A6J1E935 (MADS-box transcription factor 6-like OS=Cucurbita moschata OX=3662 GN=LOC111430519 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 7.4e-71
Identity = 156/230 (67.83%), Postives = 178/230 (77.39%), Query Frame = 0


Query: 2   GRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIVFSNRGKLFEFGSID 61
           G+GKVV+ERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALI+FS+RGKLFEFGS D
Sbjct: 15  GKGKVVVERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIMFSSRGKLFEFGSTD 74

Query: 62  VNKILERYHQRCYSSGSSTNLDEIDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLKE 121
           +NKILERYH RCY++GS+TNL    +QIEEVSKLRAKYESLQRSHRN +GEELE L++KE
Sbjct: 75  MNKILERYHHRCYNTGSTTNLHHTHVQIEEVSKLRAKYESLQRSHRNLVGEELEALSIKE 134

Query: 122 LHNLEKQLDETLSHARQRKAEIMLQKLADLRQMEQDLGDQNTQLKSKLEEEQQCMQEKEG 181
           LH LEKQLD+TLS  R RK EIMLQK+AD R+MEQ+LGD NTQLKSK+ E Q+CMQ+ E 
Sbjct: 135 LHTLEKQLDKTLSQTRHRKVEIMLQKIADTRKMEQELGDVNTQLKSKV-EGQECMQQNE- 194

Query: 182 GEEDHPMNYEVVGADPNMNTTRYFDPQEEEEEGRAMIEAGNNDLIPDWLL 232
                                     QEEEEEG AM+    + LIPD +L
Sbjct: 195 -------------------------EQEEEEEG-AML--AGSSLIPDCVL 214

[Close]

BLAST of CcUC05G090360 vs. ExPASy TrEMBL
Match: A0A5D3DF02 (MADS-box transcription factor 17-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold440G00130 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 6.3e-62
Identity = 126/140 (90.00%), Postives = 135/140 (96.43%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIVFSNRGKLFEFGSI 60
           MGRGKVVLERIEN+VNRQVTFSKRRNGLLKKA ELSVLCDVDVALI+FS RGKLFEFGS 
Sbjct: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60

Query: 61  DVNKILERYHQRCYSSGSSTNLDEIDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           D+NKILERYHQ+CY+SGS+TNLDE DIQIEEVSKLRAKYESLQRS+RNFLGEELEPL+LK
Sbjct: 61  DMNKILERYHQQCYTSGSTTNLDESDIQIEEVSKLRAKYESLQRSYRNFLGEELEPLSLK 120

Query: 121 ELHNLEKQLDETLSHARQRK 141
           ELHNLEKQLD+TLS ARQRK
Sbjct: 121 ELHNLEKQLDKTLSQARQRK 140

[Close]

BLAST of CcUC05G090360 vs. ExPASy TrEMBL
Match: A0A2I4FGK2 (agamous-like MADS-box protein MADS3 isoform X1 OS=Juglans regia OX=51240 GN=LOC108998622 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.8e-56
Identity = 122/178 (68.54%), Postives = 145/178 (81.46%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIVFSNRGKLFEFGSI 60
           MGRG+VVLERIENK+NRQVTFSKRRNGLLKKA ELSVLCD +VALI+FS+RGKLF+FGS 
Sbjct: 1   MGRGRVVLERIENKINRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSSRGKLFQFGST 60

Query: 61  DVNKILERYHQRCYSSGSSTNLDEIDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           ++NKILERY Q CYS  +            E+++LRAKYESLQRS R+ LGE+LEPLNLK
Sbjct: 61  EMNKILERYRQCCYSQDTDVVEQGTQTLYREITRLRAKYESLQRSQRHMLGEDLEPLNLK 120

Query: 121 ELHNLEKQLDETLSHARQRKAEIMLQKLADLRQMEQDLGDQNTQLKSKLEEEQQCMQE 179
           EL NLEKQLD+TLS ARQRK +IML +L +LRQ E+ LG+ N QLKSK+EE+ Q + E
Sbjct: 121 ELQNLEKQLDKTLSRARQRKTQIMLDRLEELRQKERCLGEMNKQLKSKIEEKGQRVHE 178

[Close]

BLAST of CcUC05G090360 vs. TAIR 10
Match: AT2G45650.1 (AGAMOUS-like 6 )

HSP 1 Score: 189.5 bits (480), Expect = 3.0e-48
Identity = 101/174 (58.05%), Postives = 134/174 (77.01%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIVFSNRGKLFEFGSI 60
           MGRG+V ++RIENK+NRQVTFSKRRNGLLKKA ELSVLCD +VALI+FS+RGKL+EFGS+
Sbjct: 1   MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV 60

Query: 61  DVNKILERYHQRCYSSGSSTNLDEIDIQ--IEEVSKLRAKYESLQRSHRNFLGEELEPLN 120
            +   +ERY+ RCY+   S N  E   Q   +EV+KL++KYESL R++RN LGE+L  + 
Sbjct: 61  GIESTIERYN-RCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMG 120

Query: 121 LKELHNLEKQLDETLSHARQRKAEIMLQKLADLRQMEQDLGDQNTQLKSKLEEE 173
           +KEL  LE+QL+  L+  RQRK ++M++++ DLR+ E+ LGD N QLK K E E
Sbjct: 121 VKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKFETE 173

[Close]

BLAST of CcUC05G090360 vs. TAIR 10
Match: AT3G61120.1 (AGAMOUS-like 13 )

HSP 1 Score: 169.5 bits (428), Expect = 3.2e-42
Identity = 86/171 (50.29%), Postives = 131/171 (76.61%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIVFSNRGKLFEFGSI 60
           MGRGKV ++RIENK+ RQVTFSKR++GLLKKA ELSVLCD +V+LI+FS  GKL+EF ++
Sbjct: 1   MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNV 60

Query: 61  DVNKILERYHQRCYSSGSSTNLDEIDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
            V + +ERY++   +   +  L++     +EV+KL+ KYESL R+HRN +GE+LE +++K
Sbjct: 61  GVGRTIERYYRCKDNLLDNDTLEDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIK 120

Query: 121 ELHNLEKQLDETLSHARQRKAEIMLQKLADLRQMEQDLGDQNTQLKSKLEE 172
           EL  LE+QL+  LS  R++K ++M++++ +LR+ E++LGD N +LK + E+
Sbjct: 121 ELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKLKLETED 171

[Close]

BLAST of CcUC05G090360 vs. TAIR 10
Match: AT5G15800.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 167.2 bits (422), Expect = 1.6e-41
Identity = 96/174 (55.17%), Postives = 122/174 (70.11%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIVFSNRGKLFEF-GS 60
           MGRG+V L+RIENK+NRQVTF+KRRNGLLKKA ELSVLCD +VALI+FSNRGKL+EF  S
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  IDVNKILERYHQRCYSSGSSTN--LDEIDIQIEEVSKLRAKYESLQRSHRNFLGEELEPL 120
            ++ K L+RY +  Y S    N    E++    E  KL+ +YE+LQR  RN LGE+L PL
Sbjct: 61  SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 NLKELHNLEKQLDETLSHARQRKAEIMLQKLADLRQMEQDLGDQNTQLKSKLEE 172
           N KEL  LE+QLD +L   R  K + ML +L+DL+  EQ L + N  L  KL++
Sbjct: 121 NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDD 174

[Close]

BLAST of CcUC05G090360 vs. TAIR 10
Match: AT5G15800.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 167.2 bits (422), Expect = 1.6e-41
Identity = 96/174 (55.17%), Postives = 122/174 (70.11%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIVFSNRGKLFEF-GS 60
           MGRG+V L+RIENK+NRQVTF+KRRNGLLKKA ELSVLCD +VALI+FSNRGKL+EF  S
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  IDVNKILERYHQRCYSSGSSTN--LDEIDIQIEEVSKLRAKYESLQRSHRNFLGEELEPL 120
            ++ K L+RY +  Y S    N    E++    E  KL+ +YE+LQR  RN LGE+L PL
Sbjct: 61  SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 NLKELHNLEKQLDETLSHARQRKAEIMLQKLADLRQMEQDLGDQNTQLKSKLEE 172
           N KEL  LE+QLD +L   R  K + ML +L+DL+  EQ L + N  L  KL++
Sbjct: 121 NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDD 174

[Close]

BLAST of CcUC05G090360 vs. TAIR 10
Match: AT3G02310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 164.5 bits (415), Expect = 1.0e-40
Identity = 115/252 (45.63%), Postives = 147/252 (58.33%), Query Frame = 0


Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIVFSNRGKLFEFGSI 60
           MGRG+V L+RIENK+NRQVTF+KRRNGLLKKA ELSVLCD +V+LIVFSNRGKL+EF S 
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCST 60

Query: 61  -DVNKILERYHQRCYSSGSSTN--LDEIDIQIEEVSKLRAKYESLQRSHRNFLGEELEPL 120
            ++ K LERY +  Y S    N    E++    E  KL+ +YE+LQR  RN LGE+L PL
Sbjct: 61  SNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 NLKELHNLEKQLDETLSHARQRKAEIMLQKLADLRQMEQDLGDQNTQLKSKLEEEQQCMQ 180
           N KEL  LE+QLD +L   R  K + ML +L+DL+  E  L D N  L  KLE+      
Sbjct: 121 NSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRH 180

Query: 181 EK-----EGGEED-----HPMN-----YEVVGADPNMNTTRYFDPQEEEEEG---RAMIE 232
                  EGG++      HP       Y+ +  DP +    Y  P   E+     +   +
Sbjct: 181 HHIGGGWEGGDQQNIAYGHPQAHSQGLYQSLECDPTLQ-IGYSHPVCSEQMAVTVQGQSQ 240

The following BLAST results are available for this feature:

BLAST of CcUC05G090360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886448.1	3.7e-109	91.34	agamous-like MADS-box protein MADS3 [Benincasa hispida]	[more]
XP_008439145.1	8.1e-96	83.61	PREDICTED: MADS-box transcription factor 17-like [Cucumis melo]	[more]
XP_011651126.1	1.4e-95	84.12	agamous-like MADS-box protein MADS3 [Cucumis sativus] >KAE8650443.1 hypothetical...	[more]
XP_022141193.1	3.4e-86	80.91	MADS-box transcription factor 6-like [Momordica charantia]	[more]
XP_022922550.1	1.5e-70	67.83	MADS-box transcription factor 6-like [Cucurbita moschata]	[more]

BLAST of CcUC05G090360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LLR1	4.4e-52	49.19	Agamous-like MADS-box protein MADS3 OS=Vitis vinifera OX=29760 GN=MADS3 PE=2 SV=...	[more]
Q6EU39	7.0e-50	61.27	MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS...	[more]
Q7XUN2	2.7e-49	61.14	MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
P29386	4.2e-47	58.05	Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana OX=3702 GN=AGL6 PE=1 ...	[more]
Q39685	3.1e-42	58.96	MADS-box protein CMB1 OS=Dianthus caryophyllus OX=3570 GN=CMB1 PE=2 SV=1	[more]

BLAST of CcUC05G090360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AY43	3.9e-96	83.61	MADS-box transcription factor 17-like OS=Cucumis melo OX=3656 GN=LOC103484028 PE...	[more]
A0A6J1CJS1	1.7e-86	80.91	MADS-box transcription factor 6-like OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A6J1E935	7.4e-71	67.83	MADS-box transcription factor 6-like OS=Cucurbita moschata OX=3662 GN=LOC1114305...	[more]
A0A5D3DF02	6.3e-62	90.00	MADS-box transcription factor 17-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A2I4FGK2	1.8e-56	68.54	agamous-like MADS-box protein MADS3 isoform X1 OS=Juglans regia OX=51240 GN=LOC1...	[more]

BLAST of CcUC05G090360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45650.1	3.0e-48	58.05	AGAMOUS-like 6	[more]
AT3G61120.1	3.2e-42	50.29	AGAMOUS-like 13	[more]
AT5G15800.1	1.6e-41	55.17	K-box region and MADS-box transcription factor family protein	[more]
AT5G15800.2	1.6e-41	55.17	K-box region and MADS-box transcription factor family protein	[more]
AT3G02310.1	1.0e-40	45.63	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 148..171
None	No IPR available	COILS	Coil	Coil	coord: 85..105
None	No IPR available	COILS	Coil	Coil	coord: 119..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..190
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..178
None	No IPR available	PANTHER	PTHR48019:SF70	TRUNCATED TRANSCRIPTION FACTOR CAULIFLOWER A-LIKE ISOFORM X1	coord: 1..178
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 65.94 coord: 23..38 score: 82.84 coord: 38..59 score: 59.6
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 9.6E-37 score: 138.1
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 5.0E-26 score: 90.0
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 30.515417
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..81 e-value: 2.1E-28 score: 100.0
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..87
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 90..169 e-value: 3.3E-23 score: 81.7
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 85..175 score: 14.128912
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..78 e-value: 2.68126E-42 score: 136.143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G090360.1	CcUC05G090360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding