CcUC05G089570 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGGAAGCTTTAGCCACCAAAGCCTCGTCCTCGGCCTTCTATATCTATTGATTTTTAGTAACATTGTCGTTATTGCCATTGATAGCTTGACGAGCCCGTGCAATGGTTCGATTGCAGAGTGCTACGAAGGGGAAGAGATGTTAATGGAGTCAGAGATAAGTCGAAGGTTTCTCGAACAAAAGACCAAACATATATCGTATGATGTTTTGATTAAAGACAAACCAACTTGCAGTAAAGGTGCAGGCAAACCTTATGGTAAAAATTGTAAGTCTTCTGAAGCTAATCCTTATGATAGAGGATGCGGTGGAATATATAATCGATGTAAGACTTAG ATGAAAGGAAGCTTTAGCCACCAAAGCCTCGTCCTCGGCCTTCTATATCTATTGATTTTTAGTAACATTGTCGTTATTGCCATTGATAGCTTGACGAGCCCGTGCAATGGTTCGATTGCAGAGTGCTACGAAGGGGAAGAGATGTTAATGGAGTCAGAGATAAGTCGAAGGTTTCTCGAACAAAAGACCAAACATATATCGTATGATGTTTTGATTAAAGACAAACCAACTTGCAGTAAAGGTGCAGGCAAACCTTATGGTAAAAATTGTAAGTCTTCTGAAGCTAATCCTTATGATAGAGGATGCGGTGGAATATATAATCGATGTAAGACTTAG ATGAAAGGAAGCTTTAGCCACCAAAGCCTCGTCCTCGGCCTTCTATATCTATTGATTTTTAGTAACATTGTCGTTATTGCCATTGATAGCTTGACGAGCCCGTGCAATGGTTCGATTGCAGAGTGCTACGAAGGGGAAGAGATGTTAATGGAGTCAGAGATAAGTCGAAGGTTTCTCGAACAAAAGACCAAACATATATCGTATGATGTTTTGATTAAAGACAAACCAACTTGCAGTAAAGGTGCAGGCAAACCTTATGGTAAAAATTGTAAGTCTTCTGAAGCTAATCCTTATGATAGAGGATGCGGTGGAATATATAATCGATGTAAGACTTAG MKGSFSHQSLVLGLLYLLIFSNIVVIAIDSLTSPCNGSIAECYEGEEMLMESEISRRFLEQKTKHISYDVLIKDKPTCSKGAGKPYGKNCKSSEANPYDRGCGGIYNRCKT Homology
BLAST of CcUC05G089570 vs. NCBI nr
Match: KAG6582109.1 (Protein RALF-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018526.1 Protein RALF-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 137.1 bits (344), Expect = 9.1e-29 Identity = 73/113 (64.60%), Postives = 86/113 (76.11%), Query Frame = 0
BLAST of CcUC05G089570 vs. NCBI nr
Match: XP_022138044.1 (protein RALF-like 32 [Momordica charantia]) HSP 1 Score: 118.6 bits (296), Expect = 3.4e-23 Identity = 69/123 (56.10%), Postives = 81/123 (65.85%), Query Frame = 0
BLAST of CcUC05G089570 vs. NCBI nr
Match: XP_022138261.1 (protein RALF-like 32 [Momordica charantia]) HSP 1 Score: 107.1 bits (266), Expect = 1.0e-19 Identity = 58/97 (59.79%), Postives = 68/97 (70.10%), Query Frame = 0
BLAST of CcUC05G089570 vs. NCBI nr
Match: XP_022138047.1 (protein RALF-like 32 [Momordica charantia]) HSP 1 Score: 95.9 bits (237), Expect = 2.3e-16 Identity = 54/100 (54.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of CcUC05G089570 vs. NCBI nr
Match: XP_004147646.3 (protein RALF-like 32 [Cucumis sativus]) HSP 1 Score: 92.0 bits (227), Expect = 3.4e-15 Identity = 53/105 (50.48%), Postives = 69/105 (65.71%), Query Frame = 0
BLAST of CcUC05G089570 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 7.6e-10 Identity = 41/83 (49.40%), Postives = 52/83 (62.65%), Query Frame = 0
BLAST of CcUC05G089570 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 2.9e-09 Identity = 38/80 (47.50%), Postives = 51/80 (63.75%), Query Frame = 0
BLAST of CcUC05G089570 vs. ExPASy Swiss-Prot
Match: O23262 (Protein RALF-like 32 OS=Arabidopsis thaliana OX=3702 GN=RALFL32 PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 8.4e-09 Identity = 37/86 (43.02%), Postives = 49/86 (56.98%), Query Frame = 0
BLAST of CcUC05G089570 vs. ExPASy Swiss-Prot
Match: Q9LK37 (Protein RALF-like 24 OS=Arabidopsis thaliana OX=3702 GN=RALFL24 PE=3 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 4.6e-07 Identity = 34/74 (45.95%), Postives = 44/74 (59.46%), Query Frame = 0
BLAST of CcUC05G089570 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 1.9e-05 Identity = 35/94 (37.23%), Postives = 48/94 (51.06%), Query Frame = 0
BLAST of CcUC05G089570 vs. ExPASy TrEMBL
Match: A0A6J1C8Z5 (protein RALF-like 32 OS=Momordica charantia OX=3673 GN=LOC111009300 PE=3 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.6e-23 Identity = 69/123 (56.10%), Postives = 81/123 (65.85%), Query Frame = 0
BLAST of CcUC05G089570 vs. ExPASy TrEMBL
Match: A0A6J1C986 (protein RALF-like 32 OS=Momordica charantia OX=3673 GN=LOC111009478 PE=3 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 4.9e-20 Identity = 58/97 (59.79%), Postives = 68/97 (70.10%), Query Frame = 0
BLAST of CcUC05G089570 vs. ExPASy TrEMBL
Match: A0A6J1C9Y4 (protein RALF-like 32 OS=Momordica charantia OX=3673 GN=LOC111009304 PE=3 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.1e-16 Identity = 54/100 (54.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of CcUC05G089570 vs. ExPASy TrEMBL
Match: A0A5A7VKE5 (Protein RALF-like 32 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00040 PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 2.8e-15 Identity = 54/105 (51.43%), Postives = 68/105 (64.76%), Query Frame = 0
BLAST of CcUC05G089570 vs. ExPASy TrEMBL
Match: A0A314L8Z7 (Protein ralf-like 32 OS=Nicotiana attenuata OX=49451 GN=RALFL32_1 PE=3 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 6.2e-15 Identity = 46/96 (47.92%), Postives = 65/96 (67.71%), Query Frame = 0
BLAST of CcUC05G089570 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 ) HSP 1 Score: 64.7 bits (156), Expect = 5.4e-11 Identity = 41/83 (49.40%), Postives = 52/83 (62.65%), Query Frame = 0
BLAST of CcUC05G089570 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 ) HSP 1 Score: 62.8 bits (151), Expect = 2.0e-10 Identity = 38/80 (47.50%), Postives = 51/80 (63.75%), Query Frame = 0
BLAST of CcUC05G089570 vs. TAIR 10
Match: AT4G14010.1 (ralf-like 32 ) HSP 1 Score: 61.2 bits (147), Expect = 5.9e-10 Identity = 37/86 (43.02%), Postives = 49/86 (56.98%), Query Frame = 0
BLAST of CcUC05G089570 vs. TAIR 10
Match: AT3G23805.1 (ralf-like 24 ) HSP 1 Score: 55.5 bits (132), Expect = 3.3e-08 Identity = 34/74 (45.95%), Postives = 44/74 (59.46%), Query Frame = 0
BLAST of CcUC05G089570 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 ) HSP 1 Score: 50.1 bits (118), Expect = 1.4e-06 Identity = 35/94 (37.23%), Postives = 48/94 (51.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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