CcUC05G086560 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G086560
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	transmembrane emp24 domain-containing protein p24beta3-like
Location	CicolChr05: 4561707 .. 4564952 (-)
RNA-Seq Expression	CcUC05G086560
Synteny	CcUC05G086560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGCACAGGGCTTCCTAACCCCGTTCAGCATTCTTAGATTTCGGACTAAGAAAAATCTGTAGAGGAAGAAGAGACCCGAAAAGGAGAGAAAATGGAGAGGAGGCTGAGAGAGAAAGGATTCGGATATCTGTTGGCGGGTCTTCTTCTGGCAAGCCTAATCGCCAGAATCGATTCAATTTCGGTCACTGTGAACGAGATTGAATGCGTCTATGAGTATGTATTGTACGAAGGCGATACTGTCTCGGGGAATTTTGTCGTTGTCGATCATGATATTTTCTGGGGCGCTGATCATCCCGGCATCGATTTCACTGTAACCCCCATTAATTCGCTCTTTAATCACTTCTTTAATTCATGTTTGCATGATGGTGTCTTTCGTTTCTCCCGATTTGTAGATTGCCCTGATTAAGATTGGATCTTGGATTGGGGGAGGGGTGCGAGGGTTGGGTTTTTTATTTCTCATTTTGCTGGGAAATCTTCTTTTCTTTGTCTTAATTTGGATTAGGAAAGAGGGGTAAAGGATGTTTGTTGATTTTGACTTGTTTAAGAACCTGGAAATGTTTGCCCCTTTTGTTAATTTGGATGCATGGGGGTTGTTTCTTTGGATTTGCGATGATATTTTAGATTGATAATTGTAATTCATTCTGCGAGAGGATCTGTTGTTAAACAGTTTCTGATCAATACATTCACATTCATAATCCCCTTTTCGCGCCTGAACCTATATATGTTTAGAAAAGTTAATAAAGATGCCTTTCTCTTCTTCCTCTCTAATCCATCTTAACCTAGATATATTATTTCTTTGGTTATGTTTGGCTGGATATCAGTGTACCTGGAATCTCTTGATGGAATTTTGTATCTGGTGGCTGATTGTTTTGTGTCCATAATAAAATGTACTTTTGAAGATATCTTAATGTGGGTTACTTTTGTGCAGGTTACATCTCCCGCAGGTAATGTGGTACATTCTTTGAAGGAGACATCTGGTGATAAGTTTGAGTTTAAGGCTCCTCGCAGTGGAATGTACAAATTCTGTTTTCATAATCCCTACTCGACTCCGGAGACAGTTTCTTTCTACATCCATGTTGGTCACATTCCAAATGAACATGACCTTGCTAAAGATGGTAATTGATTAACTTCTGCATAGATGCTACAGTTTTGTGCTTAGAGGTCTTGGTTGCTTATGAAAATTTAGAACTTCTCTCATTCACCTTGTTGTGGTGATTTTTTGCAGAACACCTAGACCCTATAAATGTTAAAATTGCAGAGCTTAGAGAGGCATTGGAGTCAGTAACTGCTGAGCAGAAGTATTTGAAAGCACGTGATGCACGCCACCGTCACAGTATGTGGTTTATTTATTTGGTTTGCTTGGTTCTTATCGTGAATTGGTTTATTTATGACATTTCCTGGAATTCTTGTTAGCGAATGTGATATCTAACTCTTTGGCACAAGAAAACGTCTTTTCTTCTCTAGTAGTCCAACATAACTATCACGAATATTCTGTGTGTGGGATTCCAACACATGATAGCCTAGTCATCAATCTTTTAATAATGCATATAGAATCGAATGTGGAAACCATGAGCTGAATAAATGAAATTGGTTTAGTTTTGAATATTGTCCACTGACATTATATCTCATAAAATTATGTAAGAAATTACATTTCCTTTTTGTTTCCAGTTTAAACCAACTAACAATAATGTCAAGCAAAGAACGATTACAATAAAGGAAACAAGAACCAAAACTCCTCGGCACAGTTTAGAGGGTTGAGTATCCTTTCCCAAGAGCCCAAATGCTCATCAAGTTTTCCACACCCCTAGCCTTACTCTCGCTTAATATTTATAACCCAAAAGACCTAACAAACTTAATAGCTAATTATTAGAATACCCCTTTCTACTAGTCATACTAATATTCCTACTATAACCATAACTAGGGTTCTTGCATATTAATGTAGAGGCATAGACATGAAGAACTCTATCCATATTTATGGTTCGAACTGGTCAACCTTGGCACATAAAAGAGTATATTTGACAATGGTTTTGTTTTTCCTTTTGCATTTCAGTCAATCAGTTTTTCTTGCTCTCACTCCATCTTACTTTCTGGTTTTGTACTAGTGAGATAAGATATTAGAAAGAGAATAGCCCAAGGAAGTATATCAGGATAAATTATAATTTCTTTTATCCTTTTGTTTGGATAGCAGGCCATTGTACTGAAAATGAGAAGTTTTATAAGATTGAACTTGTGACTTAAGAAAAAAATGATGTACAATACATATTAAAATTTGGCCAAGATATAAAAGCTAAAATGAAAATAACTATCTGCCTTGATTTTACCATATTTTTAGCACCCCACACACGAATTTTTGTTGGAATCTTAATATCTTACAGGTAGCCCGATGTTAACAGTCTGAACAGAATGTAAGATATTATTACTTTAGCTGCTCCACAAAGTAAAGTTAAAGATTTTGAGTTCGAATTCCTTAAATTTCATCTTTTCTCTTCGATTCTATGCTAGTAGGCCACATGCCAAGACTCGTGATGGCATATATTAACCTAAGGGTCTAGAGTCTAGAGTCAACAGTGGGCAGAGCGAATGTTAAGTTTATTCTAACCCATCAACTCGAAGTTGAATTTATGGATAATTCTACTGCATGCAAGAAGTTTTTCAAAACTGATTTGCCTATTATCATAATACTATTAAGTATTATGTTAGGACTCTGGTATTGTTTTTGCTACCTTGTCATTGCACGCCATTGTTGAGTTCAAGTTGACAACTTATTGTTTTCCTTCTGAATGCAGCAAACGAGAGTACAAGAAAGCGTGTAATTTTCTATACAGTGGGAGAGTATTTGTTGCTTGCTGTTGCAAGTGGGCTTCAGGTCATTTACATTCGTCGGCTCTTCAGCAAGTCGGTTGCTTATAACCGGGTCTGAGCATCCATCCTAGTGGTAACATTGTTGTCTCTTTAGGTTTCAGAAACCTTAGGAATGAATTATAAACTATCATTTGTTGAAAAAAGTTACACTGGTATATTATATAATCACTTTTGACTATGCTACAGTTCTTAATTATAAGTTGGGTTCAAGTGTTAGCATCTTCTTGAAGATAGGGAGAAGCCATTTACCCTATAATAGTATAATGCTGCAAAGGGGGATGTATGTGGCTATCCTCATTGCCCCTCCATTATTATGAGAAGTTGAAAGTCTATATACACTAAAACTAGATCAATATACTACTCATCAAATTGAAACTGTG

mRNA sequence

ATGGGGGCACAGGGCTTCCTAACCCCGTTCAGCATTCTTAGATTTCGGACTAAGAAAAATCTGTAGAGGAAGAAGAGACCCGAAAAGGAGAGAAAATGGAGAGGAGGCTGAGAGAGAAAGGATTCGGATATCTGTTGGCGGGTCTTCTTCTGGCAAGCCTAATCGCCAGAATCGATTCAATTTCGGTCACTGTGAACGAGATTGAATGCGTCTATGAGTATGTATTGTACGAAGGCGATACTGTCTCGGGGAATTTTGTCGTTGTCGATCATGATATTTTCTGGGGCGCTGATCATCCCGGCATCGATTTCACTATTGCCCTGATTAAGATTGGATCTTGGATTGGGGGAGGGGTTACATCTCCCGCAGGTAATGTGGTACATTCTTTGAAGGAGACATCTGGTGATAAGTTTGAGTTTAAGGCTCCTCGCAGTGGAATGTACAAATTCTGTTTTCATAATCCCTACTCGACTCCGGAGACAGTTTCTTTCTACATCCATGTTGGTCACATTCCAAATGAACATGACCTTGCTAAAGATGAACACCTAGACCCTATAAATGTTAAAATTGCAGAGCTTAGAGAGGCATTGGAGTCAGTAACTGCTGAGCAGAAGTATTTGAAAGCACGTGATGCACGCCACCGTCACACAAACGAGAGTACAAGAAAGCGTGTAATTTTCTATACAGTGGGAGAGTATTTGTTGCTTGCTGTTGCAAGTGGGCTTCAGGTCATTTACATTCGTCGGCTCTTCAGCAAGTCGGTTGCTTATAACCGGGTCTGAGCATCCATCCTAGTGGTAACATTGTTGTCTCTTTAGGTTTCAGAAACCTTAGGAATGAATTATAAACTATCATTTGTTGAAAAAAGTTACACTGGTATATTATATAATCACTTTTGACTATGCTACAGTTCTTAATTATAAGTTGGGTTCAAGTGTTAGCATCTTCTTGAAGATAGGGAGAAGCCATTTACCCTATAATAGTATAATGCTGCAAAGGGGGATGTATGTGGCTATCCTCATTGCCCCTCCATTATTATGAGAAGTTGAAAGTCTATATACACTAAAACTAGATCAATATACTACTCATCAAATTGAAACTGTG

Coding sequence (CDS)

ATGGAGAGGAGGCTGAGAGAGAAAGGATTCGGATATCTGTTGGCGGGTCTTCTTCTGGCAAGCCTAATCGCCAGAATCGATTCAATTTCGGTCACTGTGAACGAGATTGAATGCGTCTATGAGTATGTATTGTACGAAGGCGATACTGTCTCGGGGAATTTTGTCGTTGTCGATCATGATATTTTCTGGGGCGCTGATCATCCCGGCATCGATTTCACTATTGCCCTGATTAAGATTGGATCTTGGATTGGGGGAGGGGTTACATCTCCCGCAGGTAATGTGGTACATTCTTTGAAGGAGACATCTGGTGATAAGTTTGAGTTTAAGGCTCCTCGCAGTGGAATGTACAAATTCTGTTTTCATAATCCCTACTCGACTCCGGAGACAGTTTCTTTCTACATCCATGTTGGTCACATTCCAAATGAACATGACCTTGCTAAAGATGAACACCTAGACCCTATAAATGTTAAAATTGCAGAGCTTAGAGAGGCATTGGAGTCAGTAACTGCTGAGCAGAAGTATTTGAAAGCACGTGATGCACGCCACCGTCACACAAACGAGAGTACAAGAAAGCGTGTAATTTTCTATACAGTGGGAGAGTATTTGTTGCTTGCTGTTGCAAGTGGGCTTCAGGTCATTTACATTCGTCGGCTCTTCAGCAAGTCGGTTGCTTATAACCGGGTCTGA

Protein sequence

MERRLREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHDIFWGADHPGIDFTIALIKIGSWIGGGVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRVIFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV

Homology

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BLAST of CcUC05G086560 vs. NCBI nr
Match: XP_038897452.1 (transmembrane emp24 domain-containing protein p24beta3 [Benincasa hispida])

HSP 1 Score: 412.9 bits (1060), Expect = 1.8e-111
Identity = 211/228 (92.54%), Postives = 212/228 (92.98%), Query Frame = 0


Query: 1   MERRLREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60
           MERR REKG GYLLAGLLL SLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD
Sbjct: 1   MERRAREKGIGYLLAGLLLVSLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFTIALIKIGSWIGGGVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF 120
           IFWGADHPGIDFT             VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF
Sbjct: 61  IFWGADHPGIDFT-------------VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF 120

Query: 121 HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDA 180
           HNPYSTPETVSFYIHVGHIPNEH+LAKDEHLDPINVKIAELREALESVTAEQKYLKARDA
Sbjct: 121 HNPYSTPETVSFYIHVGHIPNEHNLAKDEHLDPINVKIAELREALESVTAEQKYLKARDA 180

Query: 181 RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 229
           RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV
Sbjct: 181 RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 215

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BLAST of CcUC05G086560 vs. NCBI nr
Match: XP_023538709.1 (transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 411.4 bits (1056), Expect = 5.2e-111
Identity = 209/228 (91.67%), Postives = 212/228 (92.98%), Query Frame = 0


Query: 1   MERRLREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60
           MERRLRE GFGYLLAGLLLASL A IDSISVTVNE+ECVYEYVLYEGDTVSGNFVVVDHD
Sbjct: 1   MERRLRETGFGYLLAGLLLASLFAGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFTIALIKIGSWIGGGVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF 120
           IFWGADHPGIDF+             VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF
Sbjct: 61  IFWGADHPGIDFS-------------VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF 120

Query: 121 HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDA 180
           HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDA
Sbjct: 121 HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDA 180

Query: 181 RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 229
           RHRHTNESTRKRVIFYTVGEYLLLAVASGLQV+YIRRLFSKSVAYNRV
Sbjct: 181 RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 215

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BLAST of CcUC05G086560 vs. NCBI nr
Match: XP_022939384.1 (transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita moschata] >KAG6597415.1 Transmembrane emp24 domain-containing protein p24beta3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028874.1 Transmembrane emp24 domain-containing protein p24beta3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 408.3 bits (1048), Expect = 4.4e-110
Identity = 207/228 (90.79%), Postives = 210/228 (92.11%), Query Frame = 0


Query: 1   MERRLREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60
           MERRLRE GFGYLLAGLLL SL   IDSISVTVNE+ECVYEYVLYEGDTVSGNFVVVDHD
Sbjct: 1   MERRLRETGFGYLLAGLLLVSLFTGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFTIALIKIGSWIGGGVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF 120
           IFWGADHPGIDF+             VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF
Sbjct: 61  IFWGADHPGIDFS-------------VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF 120

Query: 121 HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDA 180
           HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDA
Sbjct: 121 HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDA 180

Query: 181 RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 229
           RHRHTNESTRKRVIFYTVGEYLLLAVASGLQV+YIRRLFSKSVAYNRV
Sbjct: 181 RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 215

[Close]

BLAST of CcUC05G086560 vs. NCBI nr
Match: XP_022974395.1 (transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita maxima])

HSP 1 Score: 406.8 bits (1044), Expect = 1.3e-109
Identity = 207/228 (90.79%), Postives = 210/228 (92.11%), Query Frame = 0


Query: 1   MERRLREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60
           MERRLRE G GYLLAGLLL SL A IDSISVTVNE+ECVYEYVLYEGDTVSGNFVVVDHD
Sbjct: 1   MERRLRETGCGYLLAGLLLVSLFAGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFTIALIKIGSWIGGGVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF 120
           IFWGADHPGIDF+             VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF
Sbjct: 61  IFWGADHPGIDFS-------------VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF 120

Query: 121 HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDA 180
           HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDA
Sbjct: 121 HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDA 180

Query: 181 RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 229
           RHRHTNESTRKRVIFYTVGEYLLLAVASGLQV+YIRRLFSKSVAYNRV
Sbjct: 181 RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 215

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BLAST of CcUC05G086560 vs. NCBI nr
Match: XP_008438614.1 (PREDICTED: transmembrane emp24 domain-containing protein p24beta3 [Cucumis melo])

HSP 1 Score: 403.3 bits (1035), Expect = 1.4e-108
Identity = 207/228 (90.79%), Postives = 210/228 (92.11%), Query Frame = 0


Query: 1   MERRLREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60
           MERR+REKG GYLLA LLL SLIA IDSISVTVNEIECVYEYVLYEGD+VSGNFVVVDHD
Sbjct: 1   MERRVREKGLGYLLAALLLLSLIAGIDSISVTVNEIECVYEYVLYEGDSVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFTIALIKIGSWIGGGVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF 120
           IFWGADHPGIDFT             VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF
Sbjct: 61  IFWGADHPGIDFT-------------VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF 120

Query: 121 HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDA 180
           HNPYSTPETVSFYIHVGHIPNE+D AKDEHLDPINVKIAELREALESVTAEQKYLKARDA
Sbjct: 121 HNPYSTPETVSFYIHVGHIPNENDHAKDEHLDPINVKIAELREALESVTAEQKYLKARDA 180

Query: 181 RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 229
           RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV
Sbjct: 181 RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 215

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BLAST of CcUC05G086560 vs. ExPASy Swiss-Prot
Match: Q9LIL4 (Transmembrane emp24 domain-containing protein p24beta3 OS=Arabidopsis thaliana OX=3702 GN=At3g22845 PE=2 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 3.4e-97
Identity = 180/228 (78.95%), Postives = 197/228 (86.40%), Query Frame = 0


Query: 1   MERRLREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60
           MERR + K   ++L GL+L + I +I S+SVTVN+ ECV EYVLYEGDTVSGNFVVVDHD
Sbjct: 1   MERR-QAKIHVFVLIGLILLNSINQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFTIALIKIGSWIGGGVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF 120
           IFWG+DHPG+DFT             VTSPAGN+V +LK TSGDKFEFKAP+SGMYKFCF
Sbjct: 61  IFWGSDHPGLDFT-------------VTSPAGNIVQTLKGTSGDKFEFKAPKSGMYKFCF 120

Query: 121 HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDA 180
           HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDP+NVKIAELREALESV AEQKYLKARD 
Sbjct: 121 HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDT 180

Query: 181 RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 229
           RHRHTNESTRKRVIFYTVGEY+ LA ASGLQV+YIR+LFSKSVAYNRV
Sbjct: 181 RHRHTNESTRKRVIFYTVGEYIFLAAASGLQVLYIRKLFSKSVAYNRV 214

[Close]

BLAST of CcUC05G086560 vs. ExPASy Swiss-Prot
Match: Q9S7M9 (Transmembrane emp24 domain-containing protein p24beta2 OS=Arabidopsis thaliana OX=3702 GN=At3g07680 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.4e-23
Identity = 66/200 (33.00%), Postives = 98/200 (49.00%), Query Frame = 0


Query: 29  ISVTVNEIECVYEYVLYEGDTVSGNFVVVDHDIFWGADHPGIDFTIALIKIGSWIGGGVT 88
           I   ++  EC      YEGDT+  +FVV+  D  W  +  G+D  I              
Sbjct: 22  IRFVIDREECFSHKAEYEGDTLHVSFVVIKSDSQWHFNEDGVDLVI-------------H 81

Query: 89  SPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFYIHVGHIPNEHDLAKD 148
            P G  +H  +E    K +F   + G+Y+FCF N     ET+ F + +GH       AKD
Sbjct: 82  GPTGEQIHDFREQISAKHDFVVQKKGVYRFCFTNKSPYHETIDFDVQLGHFAYYDQHAKD 141

Query: 149 EHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRVIFYTVGEYLLLAVAS 208
           EH  P+  +I++L EAL ++  EQ +L+A+  R    NE+  KR +   + E   L  AS
Sbjct: 142 EHFTPLMEQISKLEEALYNIQFEQHWLEAQTDRQAIVNENMSKRAVHKALFESFALIGAS 201

Query: 209 GLQVIYIRRLFSKSVAYNRV 229
            LQV  +RRLF + +  +RV
Sbjct: 202 FLQVYLLRRLFERKLGMSRV 208

[Close]

BLAST of CcUC05G086560 vs. ExPASy Swiss-Prot
Match: Q769F9 (Transmembrane emp24 domain-containing protein A OS=Dictyostelium discoideum OX=44689 GN=empA PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.5e-15
Identity = 70/210 (33.33%), Postives = 103/210 (49.05%), Query Frame = 0


Query: 13  LLAGLLLAS-LIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHDIFWGADHPGID 72
           ++A L +AS  I    S  V+    EC+YE +      V  +F  +   I  G +   ID
Sbjct: 10  VIALLCIASNSIVESFSFKVSAKVEECIYEEI-----GVDLSFTAMFQVIQGGFN--DID 69

Query: 73  FTIALIKIGSWIGGGVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYS--TPET 132
           FTI              SP   +V+S +  S      ++  +G+Y FCF N  S  T +T
Sbjct: 70  FTI-------------ISPDKRIVYSGQRESEGTKTLRSSFAGVYSFCFSNKMSSLTDKT 129

Query: 133 VSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNEST 192
           VSF + VG      ++AK + L PI   I  L + + +V  EQ Y K R+A HR+T EST
Sbjct: 130 VSFILSVGESSPIREIAKKKDLTPIERSIMTLSDGVIAVKNEQNYFKMREAAHRNTAEST 189

Query: 193 RKRVIFYTVGEYLLLAVASGLQVIYIRRLF 220
             RV++++V E  +L   S  Q+ Y+RR F
Sbjct: 190 NSRVLWWSVFEAFVLIALSIWQIYYLRRFF 199

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BLAST of CcUC05G086560 vs. ExPASy Swiss-Prot
Match: A7SXK3 (Transmembrane emp24 domain-containing protein OS=Nematostella vectensis OX=45351 GN=v1g194562 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.7e-13
Identity = 40/135 (29.63%), Postives = 73/135 (54.07%), Query Frame = 0


Query: 87  VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYS--TPETVSFYIHVGHIPNEHD 146
           +  P   V++S +  +  K+ F A   G Y +CF N  S  TP+ + F + +G  P +  
Sbjct: 63  IIGPDQKVIYSGERETSGKYTFAAHMDGTYNYCFSNKMSTMTPKVLKFSMDIGEAPKDTS 122

Query: 147 LAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRVIFYTVGEYLLL 206
              +   D ++  +++L EA+  V  EQ+Y++ R+  HR  N++T  RV++++  E L+L
Sbjct: 123 KEDNAGHDKLSEMVSQLSEAMTGVKHEQEYMEVRERIHRSINDNTNSRVVWWSFFESLVL 182

Query: 207 AVASGLQVIYIRRLF 220
              +  QV Y++R F
Sbjct: 183 VAMTLGQVYYLKRFF 197

[Close]

BLAST of CcUC05G086560 vs. ExPASy Swiss-Prot
Match: Q54BN0 (Transmembrane emp24 domain-containing protein B OS=Dictyostelium discoideum OX=44689 GN=empB PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.8e-11
Identity = 46/139 (33.09%), Postives = 75/139 (53.96%), Query Frame = 0


Query: 87  VTSPAGNVV----HSLKETSGDKFEFKAPRSGMYKFCFHNPYS--TPETVSFYIHVGHIP 146
           +T P GN +    H   +  G K  F A  SG YK CF+N  S  T + V+F        
Sbjct: 65  LTDPKGNTIFERLHFDTQMKG-KQSFTAGESGAYKVCFNNEMSRFTAKVVTF-TWASEEE 124

Query: 147 NEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRVIFYTVGE 206
              ++AK + + P++  + ++   L+SV  EQK L+ R+  +R T+EST  RV+++T+ E
Sbjct: 125 GVKEVAKGDSITPMDQSVQKIERVLQSVIHEQKKLRYREQANRDTSESTNARVVWWTIAE 184

Query: 207 YLLLAVASGLQVIYIRRLF 220
            ++L V    Q+ Y+R+ F
Sbjct: 185 VIVLVVMGVGQIWYLRKWF 201

[Close]

BLAST of CcUC05G086560 vs. ExPASy TrEMBL
Match: A0A6J1FH03 (transmembrane emp24 domain-containing protein p24beta3-like OS=Cucurbita moschata OX=3662 GN=LOC111445313 PE=3 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.1e-110
Identity = 207/228 (90.79%), Postives = 210/228 (92.11%), Query Frame = 0


Query: 1   MERRLREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60
           MERRLRE GFGYLLAGLLL SL   IDSISVTVNE+ECVYEYVLYEGDTVSGNFVVVDHD
Sbjct: 1   MERRLRETGFGYLLAGLLLVSLFTGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFTIALIKIGSWIGGGVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF 120
           IFWGADHPGIDF+             VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF
Sbjct: 61  IFWGADHPGIDFS-------------VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF 120

Query: 121 HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDA 180
           HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDA
Sbjct: 121 HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDA 180

Query: 181 RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 229
           RHRHTNESTRKRVIFYTVGEYLLLAVASGLQV+YIRRLFSKSVAYNRV
Sbjct: 181 RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 215

[Close]

BLAST of CcUC05G086560 vs. ExPASy TrEMBL
Match: A0A6J1IDU7 (transmembrane emp24 domain-containing protein p24beta3-like OS=Cucurbita maxima OX=3661 GN=LOC111473076 PE=3 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 6.1e-110
Identity = 207/228 (90.79%), Postives = 210/228 (92.11%), Query Frame = 0


Query: 1   MERRLREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60
           MERRLRE G GYLLAGLLL SL A IDSISVTVNE+ECVYEYVLYEGDTVSGNFVVVDHD
Sbjct: 1   MERRLRETGCGYLLAGLLLVSLFAGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFTIALIKIGSWIGGGVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF 120
           IFWGADHPGIDF+             VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF
Sbjct: 61  IFWGADHPGIDFS-------------VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF 120

Query: 121 HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDA 180
           HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDA
Sbjct: 121 HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDA 180

Query: 181 RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 229
           RHRHTNESTRKRVIFYTVGEYLLLAVASGLQV+YIRRLFSKSVAYNRV
Sbjct: 181 RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 215

[Close]

BLAST of CcUC05G086560 vs. ExPASy TrEMBL
Match: A0A1S3AWG7 (transmembrane emp24 domain-containing protein p24beta3 OS=Cucumis melo OX=3656 GN=LOC103483671 PE=3 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 6.8e-109
Identity = 207/228 (90.79%), Postives = 210/228 (92.11%), Query Frame = 0


Query: 1   MERRLREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60
           MERR+REKG GYLLA LLL SLIA IDSISVTVNEIECVYEYVLYEGD+VSGNFVVVDHD
Sbjct: 1   MERRVREKGLGYLLAALLLLSLIAGIDSISVTVNEIECVYEYVLYEGDSVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFTIALIKIGSWIGGGVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF 120
           IFWGADHPGIDFT             VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF
Sbjct: 61  IFWGADHPGIDFT-------------VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF 120

Query: 121 HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDA 180
           HNPYSTPETVSFYIHVGHIPNE+D AKDEHLDPINVKIAELREALESVTAEQKYLKARDA
Sbjct: 121 HNPYSTPETVSFYIHVGHIPNENDHAKDEHLDPINVKIAELREALESVTAEQKYLKARDA 180

Query: 181 RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 229
           RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV
Sbjct: 181 RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 215

[Close]

BLAST of CcUC05G086560 vs. ExPASy TrEMBL
Match: A0A5A7U264 (Transmembrane emp24 domain-containing protein p24beta3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00810 PE=3 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.2e-108
Identity = 207/228 (90.79%), Postives = 209/228 (91.67%), Query Frame = 0


Query: 1   MERRLREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60
           MERR REKG GYLLA LLL SLIA IDSISVTVNEIECVYEYVLYEGD+VSGNFVVVDHD
Sbjct: 1   MERRAREKGLGYLLAALLLLSLIAGIDSISVTVNEIECVYEYVLYEGDSVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFTIALIKIGSWIGGGVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF 120
           IFWGADHPGIDFT             VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF
Sbjct: 61  IFWGADHPGIDFT-------------VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF 120

Query: 121 HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDA 180
           HNPYSTPETVSFYIHVGHIPNE+D AKDEHLDPINVKIAELREALESVTAEQKYLKARDA
Sbjct: 121 HNPYSTPETVSFYIHVGHIPNENDHAKDEHLDPINVKIAELREALESVTAEQKYLKARDA 180

Query: 181 RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 229
           RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV
Sbjct: 181 RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 215

[Close]

BLAST of CcUC05G086560 vs. ExPASy TrEMBL
Match: A0A6J1C917 (transmembrane emp24 domain-containing protein p24beta3 OS=Momordica charantia OX=3673 GN=LOC111009500 PE=3 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.2e-107
Identity = 206/230 (89.57%), Postives = 208/230 (90.43%), Query Frame = 0


Query: 1   MER--RLREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVD 60
           MER  R RE+ FGYLLAGLLL SLIA IDSISVTVNEIECVYEYVLYEGDTVSGNFVVVD
Sbjct: 1   MERRQRQRERRFGYLLAGLLLVSLIAGIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVD 60

Query: 61  HDIFWGADHPGIDFTIALIKIGSWIGGGVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKF 120
           HDIFWGADHPGIDFT             VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKF
Sbjct: 61  HDIFWGADHPGIDFT-------------VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKF 120

Query: 121 CFHNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKAR 180
           CFHNPYSTPETVSF+IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKAR
Sbjct: 121 CFHNPYSTPETVSFHIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKAR 180

Query: 181 DARHRHTNESTRKRVIFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 229
           D RHRHTNESTRKRVIFYTVGEYLLLAV SGLQVIYIRRLFSKSV YNRV
Sbjct: 181 DTRHRHTNESTRKRVIFYTVGEYLLLAVVSGLQVIYIRRLFSKSVGYNRV 217

[Close]

BLAST of CcUC05G086560 vs. TAIR 10
Match: AT3G22845.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 355.9 bits (912), Expect = 2.4e-98
Identity = 180/228 (78.95%), Postives = 197/228 (86.40%), Query Frame = 0


Query: 1   MERRLREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60
           MERR + K   ++L GL+L + I +I S+SVTVN+ ECV EYVLYEGDTVSGNFVVVDHD
Sbjct: 1   MERR-QAKIHVFVLIGLILLNSINQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFTIALIKIGSWIGGGVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCF 120
           IFWG+DHPG+DFT             VTSPAGN+V +LK TSGDKFEFKAP+SGMYKFCF
Sbjct: 61  IFWGSDHPGLDFT-------------VTSPAGNIVQTLKGTSGDKFEFKAPKSGMYKFCF 120

Query: 121 HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDA 180
           HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDP+NVKIAELREALESV AEQKYLKARD 
Sbjct: 121 HNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDT 180

Query: 181 RHRHTNESTRKRVIFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 229
           RHRHTNESTRKRVIFYTVGEY+ LA ASGLQV+YIR+LFSKSVAYNRV
Sbjct: 181 RHRHTNESTRKRVIFYTVGEYIFLAAASGLQVLYIRKLFSKSVAYNRV 214

[Close]

BLAST of CcUC05G086560 vs. TAIR 10
Match: AT3G07680.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 111.3 bits (277), Expect = 1.0e-24
Identity = 66/200 (33.00%), Postives = 98/200 (49.00%), Query Frame = 0


Query: 29  ISVTVNEIECVYEYVLYEGDTVSGNFVVVDHDIFWGADHPGIDFTIALIKIGSWIGGGVT 88
           I   ++  EC      YEGDT+  +FVV+  D  W  +  G+D  I              
Sbjct: 22  IRFVIDREECFSHKAEYEGDTLHVSFVVIKSDSQWHFNEDGVDLVI-------------H 81

Query: 89  SPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFYIHVGHIPNEHDLAKD 148
            P G  +H  +E    K +F   + G+Y+FCF N     ET+ F + +GH       AKD
Sbjct: 82  GPTGEQIHDFREQISAKHDFVVQKKGVYRFCFTNKSPYHETIDFDVQLGHFAYYDQHAKD 141

Query: 149 EHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRVIFYTVGEYLLLAVAS 208
           EH  P+  +I++L EAL ++  EQ +L+A+  R    NE+  KR +   + E   L  AS
Sbjct: 142 EHFTPLMEQISKLEEALYNIQFEQHWLEAQTDRQAIVNENMSKRAVHKALFESFALIGAS 201

Query: 209 GLQVIYIRRLFSKSVAYNRV 229
            LQV  +RRLF + +  +RV
Sbjct: 202 FLQVYLLRRLFERKLGMSRV 208

[Close]

BLAST of CcUC05G086560 vs. TAIR 10
Match: AT1G57620.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 69.3 bits (168), Expect = 4.5e-12
Identity = 41/140 (29.29%), Postives = 73/140 (52.14%), Query Frame = 0


Query: 87  VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFYIHV----GHIPNE 146
           VT+P G V+H  + T+  +F F    SG Y  CF     +     F I++    G    +
Sbjct: 69  VTAPYGTVLHHRENTTNGQFAFTTQESGTYLACFEADAKSHGNKDFSINIDWKTGIAAKD 128

Query: 147 HD-LAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRVIFYTVGEY 206
            D +A+ E ++ + ++  +L  A+E++     YL+ R+A  R  +E T  RV +Y++   
Sbjct: 129 WDSIARKEKIEGVELEFKKLEGAVEAIHENLIYLRNREAEMRIVSEKTNSRVAWYSIMSL 188

Query: 207 LLLAVASGLQVIYIRRLFSK 222
            +  V SGLQ++Y+++ F K
Sbjct: 189 GICIVVSGLQILYLKQYFEK 208

The following BLAST results are available for this feature:

BLAST of CcUC05G086560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897452.1	1.8e-111	92.54	transmembrane emp24 domain-containing protein p24beta3 [Benincasa hispida]	[more]
XP_023538709.1	5.2e-111	91.67	transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita pepo subs...	[more]
XP_022939384.1	4.4e-110	90.79	transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita moschata]...	[more]
XP_022974395.1	1.3e-109	90.79	transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita maxima]	[more]
XP_008438614.1	1.4e-108	90.79	PREDICTED: transmembrane emp24 domain-containing protein p24beta3 [Cucumis melo]	[more]

BLAST of CcUC05G086560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LIL4	3.4e-97	78.95	Transmembrane emp24 domain-containing protein p24beta3 OS=Arabidopsis thaliana O...	[more]
Q9S7M9	1.4e-23	33.00	Transmembrane emp24 domain-containing protein p24beta2 OS=Arabidopsis thaliana O...	[more]
Q769F9	5.5e-15	33.33	Transmembrane emp24 domain-containing protein A OS=Dictyostelium discoideum OX=4...	[more]
A7SXK3	6.7e-13	29.63	Transmembrane emp24 domain-containing protein OS=Nematostella vectensis OX=45351...	[more]
Q54BN0	4.8e-11	33.09	Transmembrane emp24 domain-containing protein B OS=Dictyostelium discoideum OX=4...	[more]

BLAST of CcUC05G086560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FH03	2.1e-110	90.79	transmembrane emp24 domain-containing protein p24beta3-like OS=Cucurbita moschat...	[more]
A0A6J1IDU7	6.1e-110	90.79	transmembrane emp24 domain-containing protein p24beta3-like OS=Cucurbita maxima ...	[more]
A0A1S3AWG7	6.8e-109	90.79	transmembrane emp24 domain-containing protein p24beta3 OS=Cucumis melo OX=3656 G...	[more]
A0A5A7U264	1.2e-108	90.79	Transmembrane emp24 domain-containing protein p24beta3 OS=Cucumis melo var. maku...	[more]
A0A6J1C917	2.2e-107	89.57	transmembrane emp24 domain-containing protein p24beta3 OS=Momordica charantia OX...	[more]

BLAST of CcUC05G086560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22845.1	2.4e-98	78.95	emp24/gp25L/p24 family/GOLD family protein	[more]
AT3G07680.1	1.0e-24	33.00	emp24/gp25L/p24 family/GOLD family protein	[more]
AT1G57620.1	4.5e-12	29.29	emp24/gp25L/p24 family/GOLD family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 158..178
None	No IPR available	PANTHER	PTHR22811:SF178	BNAC05G29650D PROTEIN	coord: 12..224
IPR009038	GOLD domain	SMART	SM01190	EMP24_GP25L_2	coord: 28..220 e-value: 2.6E-50 score: 183.1
IPR009038	GOLD domain	PFAM	PF01105	EMP24_GP25L	coord: 31..219 e-value: 2.5E-41 score: 141.6
IPR009038	GOLD domain	PROSITE	PS50866	GOLD	coord: 36..136 score: 16.266949
IPR015720	Transmembrane emp24 domain-containing protein	PANTHER	PTHR22811	TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN	coord: 12..224
IPR036598	GOLD domain superfamily	SUPERFAMILY	101576	Supernatant protein factor (SPF), C-terminal domain	coord: 37..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G086560.1	CcUC05G086560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0030134	COPII-coated ER to Golgi transport vesicle
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane