CcUC05G086540 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G086540
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	meiotic recombination protein DMC1 homolog
Location	CicolChr05: 4549847 .. 4555741 (+)
RNA-Seq Expression	CcUC05G086540
Synteny	CcUC05G086540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCCATGTCAAAACGCATAATTTCACTGCCGTTTACATGACCGAACGCGACTTTCAGTTGTCCAATTCCCGCTCCTTTATAAATCCAGTCTTTCGCTGTCAATCCCATTTCATTTATTTCTAAATTTCCCGCGACCTTCCTCTGCCTTCATTCATAAGCAGGAAAACAGTTCTCCGATTTAGGGACTTCATTACCACCAATTATGCTCGCAACACTCAAGTGAGTTAGAGATTTTTGTTCTTGTTACCGTTTTCTTCCGTTTTGTACCAATTACTTTGCAATCTATTCGTCACATTATCTTTCATCTTCCGTCACTGAGATGTTGCTCAGAGCGGAAGAACAAAGCCAACAGCTACAGCTTGTAGAGCGCGAAGATATCGAGGGTGAAGACGACTTGTTCGAAGCGATTGATAAACGTGAGTTTCAGAGCTTTTAACTTATAATTAAGTTATTGTTTCGATATTTTAATAATTTCATCGACGACGTTTGTTTCGTTAATCTTAAACAGAACTTGATTTCATGACGTTGTATCTTAATGATCTGCTTGTTATTCTTGGAGGTTGATTCGTAAAACTCCAATTCTGATCAATTTTCTTTTTCCGAAGTGAAATAAGATTACTCATTCGGTTGAAAACATATCGGTTCCGGCGGTTTAGTGATCGTTTCATTTTACGATAGCCTAGCGTCCAGTTTAGCTAGGTTTATATTATCTCGCTGTCTATTTTCTCAAGGCATGCAATTCTACGAGAGTTTTGCCAAATTCGTGAAATATGCGAATTGCTTTAGTCAATCAACTGACTATCATGTTGTTCCACTACATCTGAAAGAGTTCCTTTGGCATTTTCTGTGCAGTGACTTCTCATGGAATTAATGCTGGAGACGTGAAGAAGCTTCAGGATGCAGGGATATACACCTGCAACGGTTTGATGATGCACACGAAGAAGGTAGAACAACTTTCACGTCAATTCTATATATCCTGAATTTGATATGATTTCAGTGACCAACGATTTTGTATTTTAGCACTTGACCGGGATAAAAGGCTTATCCGAGGCGAAGGTTGATAAGATCTGCGAAGCTGCCGAAAAGCTAGTGGTGAGCGATTCCGTCACCACTTCTCTATTATCCACGATACGTACAATGTTTTGCACATTGATGTCATAATGCTATAAACTTCATCTTTTCTTCAACCAACAATTATCTTTTATCTGTTGCTTTTCAGAATTTTGGTTATATCACTGGAAGCGATGCTCTGCTTAGGGTAAGCTGCTTCTGTTTTTTATTAGTAACAAATGGAGTGTTAGTGTTTAACCAAATAGATCCATAGTTCACCAAAAAGTATAGTTTGCATCGTCTTTCCTTTTCTTTTCCGCTTACGGTAAGTTTTGCGTTCGGAAACAGCTGTGTTTGATTTCCTTTAGTTTTTCTACCAGCTCCTATTAGTTCAATTTTTAGTAAACTACTGTCCGTCATGAAATGCAGACTTACTCCTTGATTTTTGTTTGTAGAGAAAGTCTGTGGTTCGCATTACGACTGGAAGCCAGGCTCTCGATGAACTCTTAGGAGGCAAGTCCTGCTTCACGACGTTCCTTTTTTCACTATCTCGCAAATCATAAGCACTAAAGTTGTTCTAATTCTTACCAAAAGGTGGAATTGAAACTCTAGCAATCACGGAAGCTTTTGGAGAATTCAGGTGAGGATGCATATGTTAATAGTTGGTTCGATTTTGTTTATTGAGAATCGAAGTCCTGTATTTAACTTGCAGCTCTCTCTGACTTCGTTAAAAAAATGCCTAGGTCCGGGAAAACACAACTCGCGCATACTCTATGCGTCTCTACGCAGGTTTATCTACTTCTTGGGCTTCACATCTGATCTTTAAAATTGAATTCGTTTTGTGTAAAAGTTATATTTCGCTAAATATGCATTAAAAGGAAAACTAAGGTTTAGCGTGTCTTTTTTTACATCTAATAATTACCGAGCGATTGTGCTTGGCGTTTGCCTTCGCAGCTTCCGACCAGCATGCGGGGAGGGAATGGAAAGGTTGCATACATTGACACTGAAGGCACTTTGTATCCTCTTCTGAAGCTTATTTTATTATGTCGTTGCGGTTTAGCCACGTCTAATGAAATGAAATTACTGTTTTCGCCCCTTCCCAGTGTCCTCTCCTTAACTATGTGCACTTGCAGTCGACCTGATCGAATTGTGCCTATAGCTGAAAGATTTGGCATGGACCCGGAAGCTGTCCTTGACAATGTAAGCCCCGTTTTTTTGTATTTAGCTTCTTCCAACCAGAACTACCAGTTGTAGATCATTTATTAATTTAATCCTAATGAAATAGATCATATATGCTCGTGCCTACACATACGAACACCAGCATAACCTTTTGCTCGGTCTTGCTGCAAAAATGTCTGAAGAACCATTTAAGCTTCTGGTGAGTCAGCAGGTAACCTGTAATTTAAATGTCAGAAACTACAATGTCTGACGTTATACATTCTGTCCCCTAATTTCAGATTGTCGACTCTATCATCGCACTTTTTCGAGTGGATTTCACTGGAAGAGGAGAACTCGCAGAGCGCCAGGTTGAATCAAATCAACTTAGACAATATACAGCGTTTTAGAATTTGATTTCCGTAGGTTAATATCACTCGTCTCCTTTGTTTCGTCATTTATGACACAAGTTGGTTGTCACATGCAGCAAAAACTGGCGCAGATGTTGTCCCGATTAACTAAAATTGCAGAAGAGTTTAATGTAGCAGTTTACATGACCAACCAAGGTAGCGATTGAACTTTTATGAAAGTCGTTTCCGGTGCTTCAACTGATGTTTATCTCATTTAGGAAACCCAAGCATGTTAACTCATTTTATGGTCGGATTACCCTGCCCTTCGTTCTTGTATTTGCTGGATTGACCGAGACTAAATCGTTTTCCGTGGAGCTAAACTCGTGTTTCTCATTCAAAATGTTGGTTTTACTAAATGCAATCTTATTGTTGACAACAGTCGTTGCAGACCCAGGTGGAGGAGTTTTTGTATCAGATCCCAAAAAACCAGCAGGAGGCCACGTTCTTGCCCATGCTGCTACAGTCAGATTGATGTTCAGAAAAGGCAAAGGTGAACAACGGATCTGCAAGGTGTTCGATGCCCCTAATTTGCCAGAGTCTGAAGCTATATCCTTAACTCACATCGCACCTCACACTTGACACTTTCATTAATTAGTATCTCAACGAATTCTGAATTCATCAAACTATGATGTAAGCAGAACTGCAGAAGTCCTACACTTCTCCTGCACTCACATCAGTACATGAAAATTGCACTCAATAACTATGGTAGAAAATACATAAGAGAAAAAGCACTGCACCTTCCACACAATTTTTCCTTAATAGAAGTACGTATTTCAGATAACACCAGGGGGCATTGCAGATGCAAAGGATTGAGGTCCCGTAAGATGTAAGGATATTGAAGGCCACCACAGGTTGACATGTTTAATTTTTCATCTAGTTACTAGATACGTATTTTTATCTTGAAGTGACAATATATCCTCCCTGTGTAGATTGGAACGTTTTTAGCCTACCCCATATGCAGTAGAATTGAATAAAATAACGAAAAAGGCTATTCTCCAAAATACAATCGGAATGCATATTAAACTAAAGCCAATTATGTAGTTGGCAATGAGCAACTTTATTGGCATAAATCCAAAACTACAATGAAATTCTGTTAGGATCAATGCCCTTCATCAAATTATATAAGTTGGATAAGCATTAGGAAAACAAACTATTATTCCACCGTAAGCAGAATGCAACTCAGTTAAGCCAACAAGATCCATAAGATATAAGTTGTAACTGCATGAACATGCTCATTACGGAAAGTAAAGTATAAACCCCAGTACCCATTTACAAGGCACAATTAGAGGAACAGAAGATGGAAATATGGAAAGAAAGCCGTAGGAAGGCTAAGGCAAAGTAAACAAAGCCTTTGCCGAAAATTATGCACTCAGTAGTTTGAAGACCAATTTGCAGCACTCCCAACTCTTGGCATACCAGAACTTTCCTTTCTAGCCTCTGCATCCACCTTGAAATTAGCTCCACAGACATTACCTGAACTATCCACCCTTGGCACTGGCTTCAGCTCATTAAGTGGATGCTCATAACTCCTCAACCCACCAGAGGTTGTGAAGAAACAACCTAAAATACCAAACATAAGTGCATAAAATAAACACCTGAAAACGTCAATTCGAGCATCGCTGGATAGATAAGACATAAATTACTAATCTAAAGATCAATTGATCAATCCTCCATTTTCATAATTGTTGAACGAAACAAAATATACTTATTTTGGAAAGGGGCATAGCCAAATGGTGATAGAACAAGTTAAACATCATAAAAAATTACCTTTGGGAAAAGGAGCAAAAGATTTTCCACAACCCTTCTTCATAGTTTCTACATCATCGGAGAGAACAAGCTGTCCTTCAGAATCAGTTCCCCAATGGAAGGGAACGCTCCCATCAACATCCTGCAGATCAAGAAACATGAAGGGAAAAAAGTGATTAACAATAACAATATAAATTTGCAACAAATTATGGTTAAACTAAGAGATCGAGGCAGCTTACAGAAGCAAAAAATGAAGTTTTTGAGGAACTGTCATATAGGACAAACACAAATTTCCCCTGAATATCTCTCACGACTTGATCAGCTGGGTATGGACCCCGATCTCTTAATGTTCGATAGGCTTCAATAACGATGATAACCTCGTTTGCAGCTTTGTTCAAACCATACTGCTGTTTGAGTTGAGCAACATTCTCAATGTGCCCTTGGAACAAGCAGAAAATGTCGTCCACAACCGCAAATAATCTAAGGTTATAAAAACAAATATCATCACTTTGCCAACAGCAGGGAAATCTAACAAATGTTCAAACAAGAATGAAATTACAAGCAAATAATGGTTACCAAACAACCCCCAACTCTCTTACCATTACCAATGATTCAATACAAATCCCATAACAATTATGATGATTGATAAAGTGCAAAAGAATAAGCCAAACCAAGAATCCCATAATTTTCGTTGAGGATGCAAAATAAGAAAAAAAAAAATCATTTCAAATCTCGAAAGATTTTACCTCCATAATTTCGATCGAGTCAGAATGAAAAAACTCAAGCAAAACGAAAAAAAAGGCAAAATAATGGCCTCAAAGCATACAACCATTTCCCCCACCAAAACTCAACCACCACACGAGTAGAAGATGCAATTTCATACCCAAGAAACAAAAGAACCAATAGCAGACGAAAAAAAAAAGATCAATAAACAAAGAAAACTCGATTCTGGTCAATTAAAGCAGATTCTCATCCAACCAATATGACACATTCAATAGAAGAAACCTCCCGGAGACAGTAAGTTAACAAGATCAGTGATCAGATCCAGAAAAAAAACATTAAAAAAGAAAGAAACAATAGCAATAAAAATTAAAAAAGAAACAGAGAGGAATATTAGAGTATTCCCGAAAACATTGCAGAAGAAGATGAAAGGTAATCGTAATACCTAGGGAGGAGAGGGTTTTGCTTTTCGACGGAATAGGCCAAGAGACCGGCGGAGCCGAGGTTGACGATGACAGAACCAGGGTAGACGGAGCTAAAATGGTGGGCCAGAATTCCATCTTTCAGAGCGTAAACGGAATCGGACTCAGGGCTCTGCAGAGCGTCGGGACTTTTGGCCACCGATTTGTCGAAGACGGCGAGCATTTTGTAGATCGTCGATCGAAAAATGAGAGAACTAAAAACACGGTTGGTTTCGTTTCTGAATGCAAATAGAGTACGGGTGATGAAAGATCGCTTGCTGTTGGAGGACGAGGACCTGGAGTTTGGAGATACTTGAAAATTAAAATATTGACAATATATAAATAAAT

mRNA sequence

ATGGAGGCCATGTCAAAACGCATAATTTCACTGCCAGCGGAAGAACAAAGCCAACAGCTACAGCTTGTAGAGCGCGAAGATATCGAGGGTGAAGACGACTTGTTCGAAGCGATTGATAAACTGACTTCTCATGGAATTAATGCTGGAGACGTGAAGAAGCTTCAGGATGCAGGGATATACACCTGCAACGGTTTGATGATGCACACGAAGAAGCACTTGACCGGGATAAAAGGCTTATCCGAGGCGAAGGTTGATAAGATCTGCGAAGCTGCCGAAAAGCTAGTGAATTTTGGTTATATCACTGGAAGCGATGCTCTGCTTAGGCTTCCGACCAGCATGCGGGGAGGGAATGGAAAGGTTGCATACATTGACACTGAAGGCACTTTTCGACCTGATCGAATTGTGCCTATAGCTGAAAGATTTGGCATGGACCCGGAAGCTGTCCTTGACAATATCATATATGCTCGTGCCTACACATACGAACACCAGCATAACCTTTTGCTCGGTCTTGCTGCAAAAATGTCTGAAGAACCATTTAAGCTTCTGATTGTCGACTCTATCATCGCACTTTTTCGAGTGGATTTCACTGGAAGAGGAGAACTCGCAGAGCGCCAGCAAAAACTGGCGCAGATGTTGTCCCGATTAACTAAAATTGCAGAAGAGTTTAATGTAGCAGTTTACATGACCAACCAAGTCGTTGCAGACCCAGGTGGAGGAGTTTTTGTATCAGATCCCAAAAAACCAGCAGGAGGCCACGTTCTTGCCCATGCTGCTACAGTCAGATTGATGTTCAGAAAAGGCAAAGATAACACCAGGGGGCATTGCAGATGCAAAGGATTGAGGTCCCGTAAGATGGAGGAGAGGGTTTTGCTTTTCGACGGAATAGGCCAAGAGACCGGCGGAGCCGAGGTTGACGATGACAGAACCAGGGTAGACGGAGCTAAAATGGTGGGCCAGAATTCCATCTTTCAGAGCGTAAACGGAATCGGACTCAGGGCTCTGCAGAGCGTCGGGACTTTTGGCCACCGATTTGTCGAAGACGGCGAGCATTTTGTAGATCGTCGATCGAAAAATGAGAGAACTAAAAACACGGTTGGTTTCGTTTCTGAATGCAAATAGAGTACGGGTGATGAAAGATCGCTTGCTGTTGGAGGACGAGGACCTGGAGTTTGGAGATACTTGAAAATTAAAATATTGACAATATATAAATAAAT

Coding sequence (CDS)

ATGGAGGCCATGTCAAAACGCATAATTTCACTGCCAGCGGAAGAACAAAGCCAACAGCTACAGCTTGTAGAGCGCGAAGATATCGAGGGTGAAGACGACTTGTTCGAAGCGATTGATAAACTGACTTCTCATGGAATTAATGCTGGAGACGTGAAGAAGCTTCAGGATGCAGGGATATACACCTGCAACGGTTTGATGATGCACACGAAGAAGCACTTGACCGGGATAAAAGGCTTATCCGAGGCGAAGGTTGATAAGATCTGCGAAGCTGCCGAAAAGCTAGTGAATTTTGGTTATATCACTGGAAGCGATGCTCTGCTTAGGCTTCCGACCAGCATGCGGGGAGGGAATGGAAAGGTTGCATACATTGACACTGAAGGCACTTTTCGACCTGATCGAATTGTGCCTATAGCTGAAAGATTTGGCATGGACCCGGAAGCTGTCCTTGACAATATCATATATGCTCGTGCCTACACATACGAACACCAGCATAACCTTTTGCTCGGTCTTGCTGCAAAAATGTCTGAAGAACCATTTAAGCTTCTGATTGTCGACTCTATCATCGCACTTTTTCGAGTGGATTTCACTGGAAGAGGAGAACTCGCAGAGCGCCAGCAAAAACTGGCGCAGATGTTGTCCCGATTAACTAAAATTGCAGAAGAGTTTAATGTAGCAGTTTACATGACCAACCAAGTCGTTGCAGACCCAGGTGGAGGAGTTTTTGTATCAGATCCCAAAAAACCAGCAGGAGGCCACGTTCTTGCCCATGCTGCTACAGTCAGATTGATGTTCAGAAAAGGCAAAGATAACACCAGGGGGCATTGCAGATGCAAAGGATTGAGGTCCCGTAAGATGGAGGAGAGGGTTTTGCTTTTCGACGGAATAGGCCAAGAGACCGGCGGAGCCGAGGTTGACGATGACAGAACCAGGGTAGACGGAGCTAAAATGGTGGGCCAGAATTCCATCTTTCAGAGCGTAAACGGAATCGGACTCAGGGCTCTGCAGAGCGTCGGGACTTTTGGCCACCGATTTGTCGAAGACGGCGAGCATTTTGTAGATCGTCGATCGAAAAATGAGAGAACTAAAAACACGGTTGGTTTCGTTTCTGAATGCAAATAG

Protein sequence

MEAMSKRIISLPAEEQSQQLQLVEREDIEGEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLRLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPEAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATVRLMFRKGKDNTRGHCRCKGLRSRKMEERVLLFDGIGQETGGAEVDDDRTRVDGAKMVGQNSIFQSVNGIGLRALQSVGTFGHRFVEDGEHFVDRRSKNERTKNTVGFVSECK

Homology

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BLAST of CcUC05G086540 vs. NCBI nr
Match: XP_004134116.1 (meiotic recombination protein DMC1 homolog isoform X2 [Cucumis sativus] >XP_038878023.1 meiotic recombination protein DMC1 homolog [Benincasa hispida])

HSP 1 Score: 479.9 bits (1234), Expect = 1.9e-131
Identity = 255/315 (80.95%), Postives = 258/315 (81.90%), Query Frame = 0


Query: 8   IISLPAEEQSQQLQLVEREDIEGEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 67
           + +L AEEQSQQLQLVEREDIE EDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM
Sbjct: 2   LATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 61

Query: 68  HTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR------------------- 127
           HTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL+                   
Sbjct: 62  HTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVVRITTGSQALDELLG 121

Query: 128 -------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPI 187
                                          LPTSMRGGNGKVAYIDTEGTFRPDRIVPI
Sbjct: 122 GGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPI 181

Query: 188 AERFGMDPEAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG 247
           AERFGMDP AVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG
Sbjct: 182 AERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG 241

Query: 248 RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA 273
           RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA
Sbjct: 242 RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA 301

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BLAST of CcUC05G086540 vs. NCBI nr
Match: XP_031739053.1 (meiotic recombination protein DMC1 homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 479.9 bits (1234), Expect = 1.9e-131
Identity = 255/315 (80.95%), Postives = 258/315 (81.90%), Query Frame = 0


Query: 8   IISLPAEEQSQQLQLVEREDIEGEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 67
           + +L AEEQSQQLQLVEREDIE EDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM
Sbjct: 2   LATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 61

Query: 68  HTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR------------------- 127
           HTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL+                   
Sbjct: 62  HTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVVRITTGSQALDELLG 121

Query: 128 -------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPI 187
                                          LPTSMRGGNGKVAYIDTEGTFRPDRIVPI
Sbjct: 122 GGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPI 181

Query: 188 AERFGMDPEAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG 247
           AERFGMDP AVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG
Sbjct: 182 AERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG 241

Query: 248 RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA 273
           RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA
Sbjct: 242 RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA 301

[Close]

BLAST of CcUC05G086540 vs. NCBI nr
Match: TYK17232.1 (meiotic recombination protein DMC1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 478.8 bits (1231), Expect = 4.3e-131
Identity = 254/315 (80.63%), Postives = 258/315 (81.90%), Query Frame = 0


Query: 8   IISLPAEEQSQQLQLVEREDIEGEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 67
           + +L AEEQSQQLQLVEREDIE EDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM
Sbjct: 2   LATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 61

Query: 68  HTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR------------------- 127
           HTKKHLTGIKGLSEAKVDKICEAA+KLVNFGYITGSDALL+                   
Sbjct: 62  HTKKHLTGIKGLSEAKVDKICEAADKLVNFGYITGSDALLKRKSVVRITTGSQALDELLG 121

Query: 128 -------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPI 187
                                          LPTSMRGGNGKVAYIDTEGTFRPDRIVPI
Sbjct: 122 GGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPI 181

Query: 188 AERFGMDPEAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG 247
           AERFGMDP AVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG
Sbjct: 182 AERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG 241

Query: 248 RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA 273
           RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA
Sbjct: 242 RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA 301

[Close]

BLAST of CcUC05G086540 vs. NCBI nr
Match: XP_008438613.1 (PREDICTED: meiotic recombination protein DMC1 homolog [Cucumis melo])

HSP 1 Score: 478.8 bits (1231), Expect = 4.3e-131
Identity = 254/315 (80.63%), Postives = 258/315 (81.90%), Query Frame = 0


Query: 8   IISLPAEEQSQQLQLVEREDIEGEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 67
           + +L AEEQSQQLQLVEREDIE EDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM
Sbjct: 2   LATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 61

Query: 68  HTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR------------------- 127
           HTKKHLTGIKGLSEAKVDKICEAA+KLVNFGYITGSDALL+                   
Sbjct: 62  HTKKHLTGIKGLSEAKVDKICEAADKLVNFGYITGSDALLKRKSVVRITTGSQALDELLG 121

Query: 128 -------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPI 187
                                          LPTSMRGGNGKVAYIDTEGTFRPDRIVPI
Sbjct: 122 GGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPI 181

Query: 188 AERFGMDPEAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG 247
           AERFGMDP AVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG
Sbjct: 182 AERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG 241

Query: 248 RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA 273
           RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA
Sbjct: 242 RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA 301

[Close]

BLAST of CcUC05G086540 vs. NCBI nr
Match: KAA0049326.1 (meiotic recombination protein DMC1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 478.4 bits (1230), Expect = 5.6e-131
Identity = 254/316 (80.38%), Postives = 258/316 (81.65%), Query Frame = 0


Query: 8   IISLPAEEQSQQLQLVEREDIEGEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 67
           + +L AEEQSQQLQLVEREDIE EDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM
Sbjct: 2   LATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 61

Query: 68  HTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR------------------- 127
           HTKKHLTGIKGLSEAKVDKICEAA+KLVNFGYITGSDALL+                   
Sbjct: 62  HTKKHLTGIKGLSEAKVDKICEAADKLVNFGYITGSDALLKRKSVVRITTGSQALDELLG 121

Query: 128 --------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVP 187
                                           LPTSMRGGNGKVAYIDTEGTFRPDRIVP
Sbjct: 122 GKPASRLFFFHHLTHHKSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVP 181

Query: 188 IAERFGMDPEAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 247
           IAERFGMDP AVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT
Sbjct: 182 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 241

Query: 248 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 273
           GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH
Sbjct: 242 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 301

[Close]

BLAST of CcUC05G086540 vs. ExPASy Swiss-Prot
Match: Q96449 (Meiotic recombination protein DMC1 homolog OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 8.1e-125
Identity = 243/348 (69.83%), Postives = 264/348 (75.86%), Query Frame = 0


Query: 8   IISLPAEEQSQQLQLVEREDIEGEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 67
           + +L +EE S QLQLVEREDI+ ++DLFEAIDKL + GINAGDVKKLQDAGIYTCNGLMM
Sbjct: 2   LATLKSEESSGQLQLVEREDIDDDEDLFEAIDKLIAQGINAGDVKKLQDAGIYTCNGLMM 61

Query: 68  HTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR------------------- 127
           HTKK+LTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL+                   
Sbjct: 62  HTKKNLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVIRITTGSQALDELLG 121

Query: 128 -------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPI 187
                                          LPT+MRGGNGKVAYIDTEGTFRPDRIVPI
Sbjct: 122 GGVETSAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPI 181

Query: 188 AERFGMDPEAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG 247
           AERFGMDP AVLDNIIYARAYTYEHQ+NLLLGLAAKMSEEPF+LLIVDS+IALFRVDF+G
Sbjct: 182 AERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFSG 241

Query: 248 RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA 306
           RGELA+RQQKLAQMLSRL KIAEEFNVAVYMTNQV++DPGGGVFV+DPKKPAGGHVLAHA
Sbjct: 242 RGELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVISDPGGGVFVTDPKKPAGGHVLAHA 301

[Close]

BLAST of CcUC05G086540 vs. ExPASy Swiss-Prot
Match: Q39009 (Meiotic recombination protein DMC1 homolog OS=Arabidopsis thaliana OX=3702 GN=DMC1 PE=1 SV=2)

HSP 1 Score: 434.5 bits (1116), Expect = 1.2e-120
Identity = 227/313 (72.52%), Postives = 252/313 (80.51%), Query Frame = 0


Query: 10  SLPAEEQSQQLQLVEREDIEGEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHT 69
           SL AEE S Q+QLVERE+ + ++DLFE IDKL + GINAGDVKKLQ+AGI+TCNGLMMHT
Sbjct: 4   SLKAEETS-QMQLVEREENDEDEDLFEMIDKLIAQGINAGDVKKLQEAGIHTCNGLMMHT 63

Query: 70  KKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR--------------------- 129
           KK+LTGIKGLSEAKVDKICEAAEK+VNFGY+TGSDAL++                     
Sbjct: 64  KKNLTGIKGLSEAKVDKICEAAEKIVNFGYMTGSDALIKRKSVVKITTGCQALDDLLGGG 123

Query: 130 -----------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE 189
                                        LPT+M+GGNGKVAYIDTEGTFRPDRIVPIAE
Sbjct: 124 IETSAITEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVPIAE 183

Query: 190 RFGMDPEAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 249
           RFGMDP AVLDNIIYARAYTYEHQ+NLLLGLAAKMSEEPF++LIVDSIIALFRVDFTGRG
Sbjct: 184 RFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSIIALFRVDFTGRG 243

Query: 250 ELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 273
           ELA+RQQKLAQMLSRL KIAEEFNVAVYMTNQV+ADPGGG+F+SDPKKPAGGHVLAHAAT
Sbjct: 244 ELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAAT 303

[Close]

BLAST of CcUC05G086540 vs. ExPASy Swiss-Prot
Match: P37384 (Meiotic recombination protein DMC1 homolog OS=Lilium longiflorum OX=4690 GN=LIM15 PE=2 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 1.4e-116
Identity = 224/309 (72.49%), Postives = 239/309 (77.35%), Query Frame = 0


Query: 15  EQSQQLQLVEREDI-EGEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHL 74
           E   QLQL++R++  E E+D FE+IDKL S GINAGDVKKLQDAGIYTCNGLMMHTKK+L
Sbjct: 12  ESPGQLQLLDRQEAEEEEEDCFESIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKNL 71

Query: 75  TGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR------------------------- 134
           TGIKGLSEAKVDKICEAAEKLVN GYITGSD LL+                         
Sbjct: 72  TGIKGLSEAKVDKICEAAEKLVNVGYITGSDVLLKRKSVIRITTGSQALDELLGGGIETL 131

Query: 135 -------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGM 194
                                    LP SM GGNGKVAYIDTEGTFRPDRIVPIAERFGM
Sbjct: 132 QITEAFGEFRSGKTQIAHTLCVSTQLPVSMHGGNGKVAYIDTEGTFRPDRIVPIAERFGM 191

Query: 195 DPEAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAE 254
           D  AVLDNIIYARAYTYEHQ+NLLL LAAKMSEEPF+LLIVDS+IALFRVDF+GRGELAE
Sbjct: 192 DASAVLDNIIYARAYTYEHQYNLLLALAAKMSEEPFRLLIVDSVIALFRVDFSGRGELAE 251

Query: 255 RQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATVRLM 273
           RQQKLAQMLSRLTKIAEEFNVAVYMTNQV+ADPGGG+F+SDPKKPAGGHVLAHAATVRLM
Sbjct: 252 RQQKLAQMLSRLTKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATVRLM 311

[Close]

BLAST of CcUC05G086540 vs. ExPASy Swiss-Prot
Match: Q7EAG4 (Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. indica OX=39946 GN=DMC1B PE=2 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 1.2e-112
Identity = 220/341 (64.52%), Postives = 250/341 (73.31%), Query Frame = 0


Query: 15  EQSQQLQLVEREDIEGEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLT 74
           ++  QLQL++ E IE E++ FE+IDKL S GIN+GDVKKLQDAGIYTCNGLMMHTKK LT
Sbjct: 8   DEGGQLQLMDAERIEEEEECFESIDKLISQGINSGDVKKLQDAGIYTCNGLMMHTKKSLT 67

Query: 75  GIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR-------------------------- 134
           GIKGLSEAKVDKICEAAEKL++ G++TGSD L++                          
Sbjct: 68  GIKGLSEAKVDKICEAAEKLLSQGFMTGSDLLIKRKSVVRITTGSQALDELLGGGIETLC 127

Query: 135 ------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMD 194
                                   LP  M GGNGKVAYIDTEGTFRP+RIVPIAERFGMD
Sbjct: 128 ITEAFGEFRSGKTQLAHTLCVSTQLPIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMD 187

Query: 195 PEAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAER 254
             AVLDNIIYARAYTYEHQ+NLLLGLAAKM+EEPF+LLIVDS+IALFRVDF+GRGELAER
Sbjct: 188 ANAVLDNIIYARAYTYEHQYNLLLGLAAKMAEEPFRLLIVDSVIALFRVDFSGRGELAER 247

Query: 255 QQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATVRLMF 306
           QQKLAQMLSRLTKIAEEFNVAVY+TNQV+ADPGGG+F++DPKKPAGGHVLAHAAT+RLM 
Sbjct: 248 QQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHVLAHAATIRLML 307

[Close]

BLAST of CcUC05G086540 vs. ExPASy Swiss-Prot
Match: Q7GBF7 (Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. japonica OX=39947 GN=DMC1B PE=2 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 1.2e-112
Identity = 220/341 (64.52%), Postives = 250/341 (73.31%), Query Frame = 0


Query: 15  EQSQQLQLVEREDIEGEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLT 74
           ++  QLQL++ E IE E++ FE+IDKL S GIN+GDVKKLQDAGIYTCNGLMMHTKK LT
Sbjct: 8   DEGGQLQLMDAERIEEEEECFESIDKLISQGINSGDVKKLQDAGIYTCNGLMMHTKKSLT 67

Query: 75  GIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR-------------------------- 134
           GIKGLSEAKVDKICEAAEKL++ G++TGSD L++                          
Sbjct: 68  GIKGLSEAKVDKICEAAEKLLSQGFMTGSDLLIKRKSVVRITTGSQALDELLGGGIETLC 127

Query: 135 ------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMD 194
                                   LP  M GGNGKVAYIDTEGTFRP+RIVPIAERFGMD
Sbjct: 128 ITEAFGEFRSGKTQLAHTLCVSTQLPIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMD 187

Query: 195 PEAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAER 254
             AVLDNIIYARAYTYEHQ+NLLLGLAAKM+EEPF+LLIVDS+IALFRVDF+GRGELAER
Sbjct: 188 ANAVLDNIIYARAYTYEHQYNLLLGLAAKMAEEPFRLLIVDSVIALFRVDFSGRGELAER 247

Query: 255 QQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATVRLMF 306
           QQKLAQMLSRLTKIAEEFNVAVY+TNQV+ADPGGG+F++DPKKPAGGHVLAHAAT+RLM 
Sbjct: 248 QQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHVLAHAATIRLML 307

[Close]

BLAST of CcUC05G086540 vs. ExPASy TrEMBL
Match: A0A0A0L5D5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G145750 PE=3 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 2.2e-133
Identity = 269/384 (70.05%), Postives = 274/384 (71.35%), Query Frame = 0


Query: 5   SKRIISLPAEEQSQQLQLVEREDIEGEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNG 64
           S  ++ L AEEQSQQLQLVEREDIE EDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNG
Sbjct: 94  SVTVMLLRAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNG 153

Query: 65  LMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR---------------- 124
           LMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL+                
Sbjct: 154 LMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVVRITTGSQALDE 213

Query: 125 ----------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRI 184
                                             LPTSMRGGNGKVAYIDTEGTFRPDRI
Sbjct: 214 LLGGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRI 273

Query: 185 VPIAERFGMDPEAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVD 244
           VPIAERFGMDP AVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVD
Sbjct: 274 VPIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVD 333

Query: 245 FTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVL 288
           FTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVL
Sbjct: 334 FTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVL 393

[Close]

BLAST of CcUC05G086540 vs. ExPASy TrEMBL
Match: A0A5D3D096 (Meiotic recombination protein DMC1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00830 PE=3 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 2.1e-131
Identity = 254/315 (80.63%), Postives = 258/315 (81.90%), Query Frame = 0


Query: 8   IISLPAEEQSQQLQLVEREDIEGEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 67
           + +L AEEQSQQLQLVEREDIE EDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM
Sbjct: 2   LATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 61

Query: 68  HTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR------------------- 127
           HTKKHLTGIKGLSEAKVDKICEAA+KLVNFGYITGSDALL+                   
Sbjct: 62  HTKKHLTGIKGLSEAKVDKICEAADKLVNFGYITGSDALLKRKSVVRITTGSQALDELLG 121

Query: 128 -------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPI 187
                                          LPTSMRGGNGKVAYIDTEGTFRPDRIVPI
Sbjct: 122 GGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPI 181

Query: 188 AERFGMDPEAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG 247
           AERFGMDP AVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG
Sbjct: 182 AERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG 241

Query: 248 RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA 273
           RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA
Sbjct: 242 RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA 301

[Close]

BLAST of CcUC05G086540 vs. ExPASy TrEMBL
Match: A0A1S3AXH2 (meiotic recombination protein DMC1 homolog OS=Cucumis melo OX=3656 GN=LOC103483670 PE=3 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 2.1e-131
Identity = 254/315 (80.63%), Postives = 258/315 (81.90%), Query Frame = 0


Query: 8   IISLPAEEQSQQLQLVEREDIEGEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 67
           + +L AEEQSQQLQLVEREDIE EDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM
Sbjct: 2   LATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 61

Query: 68  HTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR------------------- 127
           HTKKHLTGIKGLSEAKVDKICEAA+KLVNFGYITGSDALL+                   
Sbjct: 62  HTKKHLTGIKGLSEAKVDKICEAADKLVNFGYITGSDALLKRKSVVRITTGSQALDELLG 121

Query: 128 -------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPI 187
                                          LPTSMRGGNGKVAYIDTEGTFRPDRIVPI
Sbjct: 122 GGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPI 181

Query: 188 AERFGMDPEAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG 247
           AERFGMDP AVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG
Sbjct: 182 AERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG 241

Query: 248 RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA 273
           RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA
Sbjct: 242 RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA 301

[Close]

BLAST of CcUC05G086540 vs. ExPASy TrEMBL
Match: A0A5A7U4Y6 (Meiotic recombination protein DMC1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G005680 PE=3 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 2.7e-131
Identity = 254/316 (80.38%), Postives = 258/316 (81.65%), Query Frame = 0


Query: 8   IISLPAEEQSQQLQLVEREDIEGEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 67
           + +L AEEQSQQLQLVEREDIE EDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM
Sbjct: 2   LATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 61

Query: 68  HTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR------------------- 127
           HTKKHLTGIKGLSEAKVDKICEAA+KLVNFGYITGSDALL+                   
Sbjct: 62  HTKKHLTGIKGLSEAKVDKICEAADKLVNFGYITGSDALLKRKSVVRITTGSQALDELLG 121

Query: 128 --------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVP 187
                                           LPTSMRGGNGKVAYIDTEGTFRPDRIVP
Sbjct: 122 GKPASRLFFFHHLTHHKSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVP 181

Query: 188 IAERFGMDPEAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 247
           IAERFGMDP AVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT
Sbjct: 182 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 241

Query: 248 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 273
           GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH
Sbjct: 242 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 301

[Close]

BLAST of CcUC05G086540 vs. ExPASy TrEMBL
Match: A0A6J1CCE5 (LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog OS=Momordica charantia OX=3673 GN=LOC111009434 PE=3 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 3.5e-131
Identity = 254/315 (80.63%), Postives = 257/315 (81.59%), Query Frame = 0


Query: 8   IISLPAEEQSQQLQLVEREDIEGEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 67
           + +L AEEQSQQLQLVEREDIE EDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM
Sbjct: 2   LATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 61

Query: 68  HTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR------------------- 127
           HTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL+                   
Sbjct: 62  HTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVVRITTGSQALDELLG 121

Query: 128 -------------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPI 187
                                          LPT MRGGNGKVAYIDTEGTFRPDRIVPI
Sbjct: 122 GGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTHMRGGNGKVAYIDTEGTFRPDRIVPI 181

Query: 188 AERFGMDPEAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG 247
           AERFGMDP AVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG
Sbjct: 182 AERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG 241

Query: 248 RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA 273
           RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA
Sbjct: 242 RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA 301

[Close]

BLAST of CcUC05G086540 vs. TAIR 10
Match: AT3G22880.1 (DNA repair (Rad51) family protein )

HSP 1 Score: 434.5 bits (1116), Expect = 8.6e-122
Identity = 227/313 (72.52%), Postives = 252/313 (80.51%), Query Frame = 0


Query: 10  SLPAEEQSQQLQLVEREDIEGEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHT 69
           SL AEE S Q+QLVERE+ + ++DLFE IDKL + GINAGDVKKLQ+AGI+TCNGLMMHT
Sbjct: 4   SLKAEETS-QMQLVEREENDEDEDLFEMIDKLIAQGINAGDVKKLQEAGIHTCNGLMMHT 63

Query: 70  KKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLR--------------------- 129
           KK+LTGIKGLSEAKVDKICEAAEK+VNFGY+TGSDAL++                     
Sbjct: 64  KKNLTGIKGLSEAKVDKICEAAEKIVNFGYMTGSDALIKRKSVVKITTGCQALDDLLGGG 123

Query: 130 -----------------------------LPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE 189
                                        LPT+M+GGNGKVAYIDTEGTFRPDRIVPIAE
Sbjct: 124 IETSAITEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVPIAE 183

Query: 190 RFGMDPEAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 249
           RFGMDP AVLDNIIYARAYTYEHQ+NLLLGLAAKMSEEPF++LIVDSIIALFRVDFTGRG
Sbjct: 184 RFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSIIALFRVDFTGRG 243

Query: 250 ELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 273
           ELA+RQQKLAQMLSRL KIAEEFNVAVYMTNQV+ADPGGG+F+SDPKKPAGGHVLAHAAT
Sbjct: 244 ELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAAT 303

[Close]

BLAST of CcUC05G086540 vs. TAIR 10
Match: AT5G20850.1 (RAS associated with diabetes protein 51 )

HSP 1 Score: 211.8 bits (538), Expect = 9.1e-55
Identity = 129/309 (41.75%), Postives = 170/309 (55.02%), Query Frame = 0


Query: 15  EQSQQLQLVEREDIEGEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLT 74
           EQ +    V+++D E        +++L + GI + DVKKL+DAG+ T  G+    +K L 
Sbjct: 5   EQRRNQNAVQQQDDEETQHGPFPVEQLQAAGIASVDVKKLRDAGLCTVEGVAYTPRKDLL 64

Query: 75  GIKGLSEAKVDKICEAAEKLVNFGYITGS-------------------DALL-------- 134
            IKG+S+AKVDKI EAA KLV  G+ + S                   D +L        
Sbjct: 65  QIKGISDAKVDKIVEAASKLVPLGFTSASQLHAQRQEIIQITSGSRELDKVLEGGIETGS 124

Query: 135 -----------------------RLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMD 194
                                  +LP    GG GK  YID EGTFRP R++ IA+RFG++
Sbjct: 125 ITELYGEFRSGKTQLCHTLCVTCQLPMDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLN 184

Query: 195 PEAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAER 254
              VL+N+ YARAY  +HQ  LLL  A+ M E  F LLIVDS  AL+R DF+GRGEL+ R
Sbjct: 185 GADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALLIVDSATALYRTDFSGRGELSAR 244

Query: 255 QQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPK-KPAGGHVLAHAATVRLM 273
           Q  LA+ L  L K+A+EF VAV +TNQVVA   G    + P+ KP GG+++AHA T RL 
Sbjct: 245 QMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSALFAGPQFKPIGGNIMAHATTTRLA 304

[Close]

BLAST of CcUC05G086540 vs. TAIR 10
Match: AT2G45280.1 (RAS associated with diabetes protein 51C )

HSP 1 Score: 76.6 bits (187), Expect = 4.6e-14
Identity = 53/156 (33.97%), Postives = 81/156 (51.92%), Query Frame = 0


Query: 107 LRLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE--------------------RFGMDPE 166
           +++P    G  GK  YIDTEG+F  +R + IAE                    +  M PE
Sbjct: 147 VQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPE 206

Query: 167 AVLDNIIYARAYTYEHQHNLLLGLAAKMSE-EPFKLLIVDSIIALFRVDFTGRGELAERQ 226
            +L+NI Y R  +Y  Q  L+  L   +SE +  K++IVDSI   FR D+    +LA+R 
Sbjct: 207 DILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDY---DDLAQRT 266

Query: 227 QKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVF 242
           + L++M  +  K+A++F++AV + NQV      G F
Sbjct: 267 RVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSF 299

[Close]

BLAST of CcUC05G086540 vs. TAIR 10
Match: AT2G45280.2 (RAS associated with diabetes protein 51C )

HSP 1 Score: 76.6 bits (187), Expect = 4.6e-14
Identity = 53/156 (33.97%), Postives = 81/156 (51.92%), Query Frame = 0


Query: 107 LRLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE--------------------RFGMDPE 166
           +++P    G  GK  YIDTEG+F  +R + IAE                    +  M PE
Sbjct: 171 VQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPE 230

Query: 167 AVLDNIIYARAYTYEHQHNLLLGLAAKMSE-EPFKLLIVDSIIALFRVDFTGRGELAERQ 226
            +L+NI Y R  +Y  Q  L+  L   +SE +  K++IVDSI   FR D+    +LA+R 
Sbjct: 231 DILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDY---DDLAQRT 290

Query: 227 QKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVF 242
           + L++M  +  K+A++F++AV + NQV      G F
Sbjct: 291 RVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSF 323

[Close]

BLAST of CcUC05G086540 vs. TAIR 10
Match: AT5G57450.1 (homolog of X-ray repair cross complementing 3 (XRCC3) )

HSP 1 Score: 52.8 bits (125), Expect = 7.1e-07
Identity = 33/138 (23.91%), Postives = 68/138 (49.28%), Query Frame = 0


Query: 108 RLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPEAV--------LDNIIYARAYT 167
           +LP S  G NG   Y+ +E  F   R+  ++  F     ++         D++     ++
Sbjct: 64  QLPISHGGLNGSSLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHS 123

Query: 168 YEHQHNLLLGLAAKMSEE----PFKLLIVDSIIALFRVDFTGR-GELAERQQKLAQMLSR 227
            +H  +++  +   +       P KL+++DS+ ALFR +F     +L +R     ++  +
Sbjct: 124 VDHLFDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGK 183

Query: 228 LTKIAEEFNVAVYMTNQV 233
           L ++A +F++A+ +TNQV
Sbjct: 184 LKQLASKFDLAIVITNQV 201

The following BLAST results are available for this feature:

BLAST of CcUC05G086540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134116.1	1.9e-131	80.95	meiotic recombination protein DMC1 homolog isoform X2 [Cucumis sativus] >XP_0388...	[more]
XP_031739053.1	1.9e-131	80.95	meiotic recombination protein DMC1 homolog isoform X1 [Cucumis sativus]	[more]
TYK17232.1	4.3e-131	80.63	meiotic recombination protein DMC1-like protein [Cucumis melo var. makuwa]	[more]
XP_008438613.1	4.3e-131	80.63	PREDICTED: meiotic recombination protein DMC1 homolog [Cucumis melo]	[more]
KAA0049326.1	5.6e-131	80.38	meiotic recombination protein DMC1-like protein [Cucumis melo var. makuwa]	[more]

BLAST of CcUC05G086540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96449	8.1e-125	69.83	Meiotic recombination protein DMC1 homolog OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q39009	1.2e-120	72.52	Meiotic recombination protein DMC1 homolog OS=Arabidopsis thaliana OX=3702 GN=DM...	[more]
P37384	1.4e-116	72.49	Meiotic recombination protein DMC1 homolog OS=Lilium longiflorum OX=4690 GN=LIM1...	[more]
Q7EAG4	1.2e-112	64.52	Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. indica OX=39...	[more]
Q7GBF7	1.2e-112	64.52	Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. japonica OX=...	[more]

BLAST of CcUC05G086540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5D5	2.2e-133	70.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G145750 PE=3 SV=1	[more]
A0A5D3D096	2.1e-131	80.63	Meiotic recombination protein DMC1-like protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3AXH2	2.1e-131	80.63	meiotic recombination protein DMC1 homolog OS=Cucumis melo OX=3656 GN=LOC1034836...	[more]
A0A5A7U4Y6	2.7e-131	80.38	Meiotic recombination protein DMC1-like protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A6J1CCE5	3.5e-131	80.63	LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog OS=Momordica cha...	[more]

BLAST of CcUC05G086540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22880.1	8.6e-122	72.52	DNA repair (Rad51) family protein	[more]
AT5G20850.1	9.1e-55	41.75	RAS associated with diabetes protein 51	[more]
AT2G45280.1	4.6e-14	33.97	RAS associated with diabetes protein 51C	[more]
AT2G45280.2	4.6e-14	33.97	RAS associated with diabetes protein 51C	[more]
AT5G57450.1	7.1e-07	23.91	homolog of X-ray repair cross complementing 3 (XRCC3)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013632	DNA recombination and repair protein Rad51-like, C-terminal	PFAM	PF08423	Rad51	coord: 108..272 e-value: 8.2E-72 score: 241.5
None	No IPR available	GENE3D	1.10.150.20		coord: 35..104 e-value: 9.0E-30 score: 104.5
None	No IPR available	PANTHER	PTHR22942:SF64	MEIOTIC RECOMBINATION PROTEIN DMC1-LIKE PROTEIN	coord: 108..272
None	No IPR available	PANTHER	PTHR22942:SF64	MEIOTIC RECOMBINATION PROTEIN DMC1-LIKE PROTEIN	coord: 21..108
None	No IPR available	PANTHER	PTHR22942	RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER	coord: 21..108
None	No IPR available	PANTHER	PTHR22942	RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER	coord: 108..272
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 105..297 e-value: 2.0E-54 score: 186.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 109..292
IPR020587	DNA recombination and repair protein RecA, monomer-monomer interface	PROSITE	PS50163	RECA_3	coord: 238..283 score: 13.048989
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 96..232 score: 24.456425
IPR033925	Rad51/DMC1/RadA	CDD	cd01123	Rad51_DMC1_radA	coord: 109..272 e-value: 1.80355E-84 score: 254.43
IPR010995	DNA repair Rad51/transcription factor NusA, alpha-helical	SUPERFAMILY	47794	Rad51 N-terminal domain-like	coord: 31..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G086540.1	CcUC05G086540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0007131	reciprocal meiotic recombination
biological_process	GO:0006259	DNA metabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000150	DNA strand exchange activity
molecular_function	GO:0000166	nucleotide binding