CcUC05G085400 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G085400
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Pre-mRNA-processing factor 19
Location	CicolChr05: 3648478 .. 3659231 (-)
RNA-Seq Expression	CcUC05G085400
Synteny	CcUC05G085400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTGGGTCGAATTCCAAGATCGTACAAGAAATCGGCCCATCGAACCAAGCTTTTGAAAACCCCTAGTATCAGTTTACGGACTCTCTTCTTCCCCGATCTCTCCTTCCATCTCCGCTTCGTCTCGTGCTGCCGGTTGCTGACTGCCCCAACGTTGCCGTCCGCTGTCGGGGAAAATCGTGCTCTGCTGCTACTGTACTCGTAAATTGTACCTCTCCGCCAAAATGAACTGCTCCAGTAAGTCTCCCGTTTCTCATTCCTGGTAATTCCTTCTGCTGTTCCTTTCATTTTGTGGTGATCTCTGTTATTGATATCTTGTGTTGCTCTGCAGTCTCCGGTGAGATTCCGGAAGAGCCAGTTGTCTCCAAGAATTCTGGATTACTCTTCGAGAAGCGCTTAATCGAGAGGCACATTTTGGTATGCTTGCTTTTTCTCTCCCCTCCCACTTGATTCTTTTCTCCATGTTTTTTAGGGCTTTTTCCCTGCGTTTCTGTTTCACCCTGCGTAATGTAAAGCGGTTTTTCTGTTCACTTCTTTATGCGTGCATTTCTCGTCTTCCTTTGGCTGAATTATATTCCCTGGAACTATGGGTCCAAGGGCTTCTTTACCCTTTTTTTTTTCCCTTTATTTTTTAAAAATTACGATATTTTATTCGAGGTGATTTCCCGCAGCTGCGGATTCTGAAACTTAGAGCCAGTTCAGTTTGTTTTTCCATAGTCGGAATATGTTAAAAATTAATACGCACCTCCATTTTATTTTTCATTTTTTAAAATTTTAAATCTTATCATCTCAAAGGACCAACTTTTTCCTTGTCAGGAAAAAAAAAAAGACCAATTTTTAAGCGTGCTTTCATACTTGTCATACGTTTTTTGCGTTCTTTTCCAACTTTTTCCGGAAGGGAGTTAAGCAGAACTTTGTTTTTGTTGCATGGATCTGCAACTTATTGGTTGAGCTTCGTTTCAATGGTTTTATCCGTTTCCCTTTCCTGCCTTGTTGACAAACATATTTTTACTAGAATGATAATTCTATGATCAAGTAAGTTTTCTGATAATCTCGTGGATATTTGTACTTTGAATTTTGTGAGTGGTAGCATAGAGGCATCAAGAGAGAATTCTTTAGAGATTTCATATTTCTTCTCATTGAGAAAAAAACACTTAAAGTCCCATTCGAAAACCATTTGGTTTTTGAAAATTATACTTATAAACACTATTTATACCTATTGATCTCTTTATTTTGTTATCTACGTTTTAGGTACGTTTTCAAAACCCAAACCAAATTTTAAAAACTCAAAAAAGTAGTTTGTAAAGACTTGTTATTTTTTTTATTTTTTATTTTGGTTAGGAGTTCGAATGTTACTTAGAAAAGACGAGAGCCATAAAACCATGGTATAAATTGTTAGAAAATGAGCATAATTTTCAAAAATCAAAAGCCAAATGGCTATCAAGTTGGACCTTAATTCTTGCATTTTGGTTATTACTTATTATTAAATACTTATATTTTATTCTTATTAGTAAATGGTTATTTCTTAGTTATTGCATTTTGGTTATTACTAATTAGTAAATACTTATATTTTAGTCTTAATTAGAATTAGATAAATCTAATATGGTGAAGATGCAAGTAATGGAAAAAAGAAGGGTAGTGATTTTACATGAATTATTCTAACTTCTAAACGTGTAAAATGGATCCTTCTCTGTCTGGTATCATTTTGAGGTTTGGCCAAATAATTTTATTTCATACAGAATAAATTGTTTAATGAATTATTTTTGGTGCTTTTCTTTGCTCCAATCTAATACAGCCTTGAGTTTTGAGGGATTTACTCCAAGGGATTTTAATTTGAAAATTTGCAACTTTTTCTTGGTTTTGTTGCGATATGTTTAAAATTATTTTTCAACGAAATATTTTTGTGTTTGATTAGTGTAAATTGTTTGTATTGCATCTCCAGGACTATGGGAAATGCCCTGTTACAGGTGAACCGCTTTCCATTGATGACATTGTTCCAATTAAAACCGGAAAGGTATGGAAATATCTCTAATTCTATTTAGTTCAGTTCTAAATATTTTGGGCCTTTTTGATTTCTCTGTAAGACAGGCATGTAAAATGTTATTGTTAGTTTAGATTTGGAGAAACAGTGTCTAAATTGGAATGTCAAGTGGTCTGTAATCTACCTAGCTCTATTTGATGAAGTTGAAAAGTGCAGGGGTTAAATGCTAGAAACATCAGATGGCCTAATAATACATTTTCCTTCTGAATGTCTTTGTTTTCTATTTTTTTTTTTTTTTTTTTAGAAATCCAATTCTCCTTCTTTAAGTTCACTCTTGTTCTTTAATTTTTCTGCAGATAGTCAAGCCCAGGCAAGCTGCTAGCATCCCTGGAATGCTTGGAATGTTCCAGAACGTATGAAATTATTTTGTCTCTGTAGTTGTCCATTTGATGGAGCTTTGATGCTCTTGCGCTCCTGGAAGATTCAACATTCTTCATTTTTGTGTTTCATTGGCTTTATTATTTAGGTTGCATTGTATTATCATGTGTGTAGCTGTACATTATTCTGTGTTTAACTCTTTAGTAAGATATACGTTAAACCCCAATACAATGAAAAATATATGAATCATGAATGTTTATAATGTTTATTTTCTAGTAATTTCTCTCTATCAGATTACCATCTTATATCTTTAGTTATTGTGTACCTTTTTTTTTTTTTTGGGGATTAGAAACAATTTTATTGATATGAAATTGCAACAAAAAAAAAAAAAAAGACAAAGAAAAAGGGAGTTATTGAGTACTTAACAATCACCATCCTTCAAGTTTAAGTGTTACATCATCTTTGGGTGTTTCACGCTGACATTTCGGTTATTAAACTATTTATAGATATGTTGGAATTTAAGCTATCTTATGTTTCAAGCTGTAGAATGTATTTCATTTTCATCATTGTTGTTCCTATTAGATATATGGGCTCAACACAAAATGGTATTTTACTTTTTTTTTTTTTTTGATCATGCTATTTGCATATACTGTTTTCTTTCATCAAAGTGAAAAAATATGTTTTCTCTATAATGATAGGAATGGGATGTTTTGGTGCTGTCGAATTTTGCATTAGAACAACAGCTGCATACAGCTAGACAGGAGCTTAGTCATGCCTTGTATCAGGTATATTATTTTTAAATTTTTTTGTTAATTCTGAATTTCCAAGGGTGCAAAGAACAATGTATCTATTTTTCATCTTCGTTCCATAGTCCATCCGTGATTATATTATATATTTTTGCCACATGATTTTGCCAATTGATTTCAGCTTTTTCAGTTTTGGATTTTTTGGATCTATTTATATGTTGTATACTTAATGCCTTACCGGTTTACTTCTGTTATCCAGCAATGTTTTGCAAGCCATATATTAAGCATATTTATGTTTTGCAATGTGGTGAAGTCATGATGAGATGACTAGAGTTTCGAAAGCTTAACTATTGGTTTTTTTCCCCTTCTAGCATGATGCTGCATGTCGCGTGATTGCAAGACTTAAAAAGGAACGGGATGAGGCTAGGTCCTTACTTGCTCAGGCAGAGAGGCAGATGCCTTTGTCGGCAACTTCATTTTCATCCAATGCTGCTGCTGTCAATGTTAATGGGAAAAGAGGTTTGTCCTCTCAATCATGCATCAGCATGGATTTTCATGAATTCCCTGGTTCTAATTTGAGTTGATTTTTCATTTTGCCAGTTAATGAGGATGAGGAATTGGGTCCTGATGGGAAGAAAATACGTCCAGGAATATCAGCCACTGTTATCTCTGAGCTCACAGATTGTAATGCTGCTCTATCACAACAAAGGAAGAGGCGGCAGGTATTTTGATGAAAATAAGTCAATTAAATATTATTATTTCCTATTAAATAAAAGGATAATTGTTGAATGGATGATGTGAATGTTTAAGATGTCAGAGAACAGGCTTTCCTTATAAACATGCATTAATTTGTAGATTGATTATTTGATCTCAGATACCTCCTACGTTGGTTCCTGTTGAGGCTCTAGAAAGTTACACCCAGATTTCTAGTCATCCACTTCATAAAACAAGCAAACCAGGCATTATATCTCTTGACATCCATCATGAGAAGGTATGATTCTAAAGTGCATCAGCCTATATTCAAATAATTTTTCTTAAATAAGTATTACATGGTCTTCATTAAAACAATTTTTTGAAGTTATACTTGCGAGTTCAATTGACCATTTTATTCAATCTGGCCAACGGGCTTTTTTGGGTGAAGAATAAGGCGTGCATGTAACATTTGTTTCACAGTTCATTCCTTTTGCTACATTTTCCCTTGGAACAGTCTGAACTTCTAAGCCATGAAATGATAATAGTTCAAATATTTAGAAGGATTTATCCTTGTTTTTCCCCTCCTTTTTGATGAAAAATTTAACTTATTAATTTTACGTGCAATTAGTAATGTGGTTATAAGCTTAGGGATCATGTCCACATGCCTTGGAAATAAACAGAAGAGCTTTGATAAATTATATGGTGAATTTTTGTTAGGATACCACCTAACAAGGAAACTCCATGAACAACAAAGAACATAAGAACACTCAAAGATAGACTTATATTGCAATGTAGTAGGAATTACAATGTAAGAATAGCCTTTTCATGAGGGTCATCTCTCTCCCAAATTCTCCCAATGGAAATTCCTACTAAGATTCCTCCTTCTTCCTCCCTAACCCACGTCCTATATTTATTACTAAAAACCCTAATAAACTTCCTAGCTAATTACTGATATGCCCTCACTAATAAACATATTAATAATCCTAAAATATCCATAACTAGGGTTCTTCACAATTTATTTCCAATATTCATGTCATTAACCAAACGTTGTATTATGAACTAAGCCATGAAGACTAGGAAGCTGTTTTAGAGTTCTACATAATATTTAGCCTTTTTCTTAAAAATCTTCTATAATGCATTGTTTATCTTGGTGTGACATAGACTATTTGTCGACATGATGGTGAGTTGAAGGTTGATTTTCCTTCTAGATGAATATAGCCGTTGCTAATAATAGTTGCACAAATTTATATCTCAGAATTTTCTTTTCCTGGTTTTAGGATGTCATTGCGACTGGGGGGCTGGACACAAATGCTGTTCTTTTTGGTCGATCATCTGGGGAGATTTTATCTACACTAAGTGGCCATTCAAAGAAGGTTTCTTTGCTTAGTTGCATTCAAGTGCCGGAGATATGTAGTATTAATATATTTTGCTAATTGAAATATTGAACATTGTTTATTTAGGTAACAAGTGTCAAATTTGTGGGCCGAGATGATTTATTCTTGACCGGTTCAGCTGACAAGGTTAGTTTTTCTTGTTGTGGTTATGAGATTAAAATTTTTTCTATTTTTGAATATATGTTTCAAATTTCGTGTTTGTAACTTTTGAGGTTTTCAAATAACTTCTGAAGATCATGTTTTCTTCTTTGGCTGAGCATAGGCGAGGCCTGACCTCTTAGAAACTAATCAGTAAGTGCTTAGTTTAATAATATATACATATAAATGAACTGCATCTCCTTTGGTCCATATATTCTTGGTTCTGAGTTTAGGCTTTAGGTTTTAGGTTTCATACCTTGGCTTCATGGACGTATTTTTTTTTTTCTTTTTTGAAACCTCATGAACGTGTAGTTATTTTTAACTTACCAAGAAATGATCATACCATAACATTTGAATTATTTTCTATATTTTTGCAATCTAAACTGTCCGCGTCTGCGTCTGAAAAAAGTAATAACTCCTTGTCCTAATTGTGCAGACTGTCCGTGTTTGGCAACAATCTGATGATGGGAACTACAATTGTAGGCACATTTTAAAGGATCATACAGCTGAGGTAAGTCATTTTTTTAATTCAATGGCCATCATTGATCATCAATGCTGGTTATAGATGAAACATGGTTCAAACACTCAGCCAAGTTGTATTGTCTCAATTTCTAAGAGGCTTATCAGTCTACAACGCTAAAGAATTGTGAAATAGGAGCAAATCAGTTCTGATTTTGTACAACTCAATTTCATGCCTTAACGTACCGTAAAGGAGTGTCAACTTTCAAAATCTTACAGGTCCAAGCTGTTACCGTCCATGCTACCAATAACTTCTTTGTCACTGCCTCCCTTGATAACACATGGTGTTTTTATGAGCTTGCTTCGGGATTATGCCTGACCCAGGTTAGTAAGTTGCTTAATTTTTCTTGAAGTGTATATATTGCTTACTCTGAGATAGACTGTCTTGAATGGGTTGTGATATACTTTTAGTTAACTGCATGTTTTATGTGCCACAGTATTATGTACACTCCAGGTGCTAGGTCTTTTCTGTTTTGTTGTTCAAAGATGGATGACTGAATATATTTCCAAATATATGATACAACTCTGTCAGTCGGTTAGGATAGTTTGAGGTTTTGGGATTGGATATCACATGCAAAATTCCTTCAATACTGAAGAGTGGCCAGTTGGTCATAGAGTATTTAAACGACTTATAAATAGAGATATTTCAAGCATTTATCAAATACAAGGGCACTAAAGCGCCTCAAACACATTTTCCTCGAATCTGATGCTCTCCACATTTATTCCTCTTTAAACAGTGATTTCCTGAAGCAAAGTATTGTTATAGAATTGATTGAACTATTGAGGTCAATGATTTATCTAAATAAAATGCTGCGCTGCTTGTGCTGCCAAACAATTTGTGAATAAGTTTGCCATTTCACCAACTTAACAAGCTTGACTAATGGTAGGGTCTCTAAGTAGTCTCATTTCATAGGCAGAATGCAAGTAGCCTAGTGTATTTCAAATACTGAAGAAAATACATGAAATGAACCTTCCCATGGATAAGAAACATTTCATTGATGGATGGAATATTCAAAGATACCTTCCCCATGTTAAGCACACAAATGACTTTTAGGATAATCACAAGGTTCTTTTCTGAGATACAGTTTTATTTTGCAGCTACACGTGATGATAGGAAATCTTGGTGTAGTTTTTAAAAAAGGTCACCCATTTAGGTTTGTATGACCTGTTTGGTTGGTCAGCTTGAATTGGGAATTGTCTCATAGAAAATTTATTTATCTTATCATCTGCAGGTTGCAGAGGATTCACAAACGGAGGGCTACACATCTGCTGCCTTTCATCCTGATGGTCTCATCCTTGGAACAGGCACGTCAGAGGCTCTTGTTAAAATTTGGGATGTAAAAAGTCAGGTGAGATTCTCTTACTTAGCAAGATATATCCCCATATCTCTAACTTTGTAAGCTCATTTCTTCTTTAAGCTTTTGCCTGCAGAAAAATGTGGCCAAATTTGATGGACACGTTGGGGCAGTAACTGCAATATCTTTTTCTGAAAATGGTTATTTCCTTGCGGTATGTGTTAAATTGGTTGCAGTTAAAGTTCTAATAATTTAACTTTGACATCATTGCAACTAATAAGAATCTAAACTGCTCAGACTGCAGCTCATGATGGAGTAAAGCTGTGGGACCTTCGAAAATTGAAGAACTTCCGTACATTTGCACCTTATGATTCAGAAACTCCAACAAACTCCGGTACGTTTCTTTCTGTAGATGCTGAATGATGTAACATAACTAGGAAGGTAATGCCTGACGTTTAGTCATGTCTTGTTTGTGGGAGTAACTGAACACTTGTTTCTGGTTTTGTAGTGGACTTTGATCATAGTGGATCTTACCTTGCGATTGCTGGCTCAGACATAAGGTAAGCGTTTGACCCTTGAAATTATATCTAACCTACCCTCAAATGGAAATCGGTATTCAATTTATTTATCACCTTATCTTTTGTTTTTAGTAGTTTCTACAAAGTCTAACGACGATGCTTGCTTGAACTCGCAGGGTTTACCAAGTTGCTAGTGTGAAATCTGAATGGAATTGCATCAAAACTATTCCAGATTTGTCTGGCACAGGTAATGTATCCCCCTCTCACATGTGTGCTCGTGTGTGTGTATATATGTATACGTACATTATCACATTAATAAATGGGAGTAGATTATTGCTGATTATTGTGACTGTATGATTCATGCTGATTATTGTGTTGATAATAATTCCCGTTCTGTACTCTATTTCAGGGAAGGCAACTTGTCTAAAATTTGGACCGGATGCAAAATACTTGGCAGTCGGGTCAATGGATCGAAATCTTCGAATCTTTGGTGTGCCTGGGGAAGATGGTGCGATGGAGGCATGAGTTTGCATCCAGAACAGAAAAGATGGAAGCTAGTTTCTGATTATATTTGCACGATTACAGGATTGATTTATGGTATTAAGAAACAAGATTCTGAAGCAGAGGCGTCTTTGGAATGTTCTCCAGCAAAGTTGAGAGTTCTTTACACCCAGATCAACAAGTTGAGCAAAATATTTTCACCATTTTTTTTTTCTTTTTTATGTTGTAATTTGGACTAATCAGGTTTGATTCTCATTTCTAAGAATGTATGACTTTGCAGAGGTGTCTGCCCGCCTTCATGTAGCCATAGAACTGTTAATATACGCTGACGTTTTTCATTGACCGTTTTATTGCATTTATTAGTGGATATACTTTATTAGATTCATATTTCCTGCTTGACTCTTGTGCCCAGTGAAATATCATGAGGGCTTTCTATTTATTGTTATCATTATTATTAATTATGATCGTTTGGTGTTATTAAGTAAAACCCCTTTAATAATATGAGGTGAATATTCAGTAATGCTTTCATCTGCACACCCCCAAAAAAATATTTTGAAGGTTTACAAGATCACATTCACGCAAAAAAAAGGAAAAAAAAAAAAAAAAAGAATATACTCAGTGTGAAGGGAATTGCGTATTGATATTTAAAAGAATAATTGATCTTATTCAAGTGATAATCTTTATGATATTTGATAATCTTTATGATATTATCCAAGACGGGTCTTGAAAAATTGAAGAATTACAAAAGAATGAAATTCTGTGGTTCACATCCATTGACCGTATGTAAGAACTGCCAGTGTAAGACATTAATTTTACAGAACCAATCTAGATTCCAAAGAGTTGAAAGTGGAAAAAGAAAAGAATATTGGAGAAGGCAAATAGTGTTTAGCCGATAACTTAACGGAGCATTCCGTCCCATCTTTGTCATGAAAGATGTTGCGAAGCATGAGCAAATCCCCAGAGCTGCATTAACCCAGATAACACAAACATAAGCAGAGGGAATGCAGGCATAGGCACATTATCACTAAAAAGACACACGTAACCAGTTTTCATCCGTAAGTTCGAGGACGTATTTCCTTTCAGAGTCAGAATTTACCTCAACATTCTTCAACTCAAACTCCTCGGCATGTGCTAAGCAAAAGTTACCAAATGTCTCACATGGTCCACTGGTTCCATTCAACCTTTTGTAAGATACAGAAGATTTGGTCATTAATAGATGCAGTACATGGGAGTTTAGAATGGAGTAGTAGATGAGAAAAGAAATACTAACAGATCTTCTTCAAGACGTAATGCGAAATTACTGCCACCACCAAGTGCTAGTAAATCATCCATACATATGTAGAAATAGCGGTTCGCTCCTATTCATATTTCCAAATCAGGCAAATACAAAAAGGTTAGTTCCTTCATTCCTTCACTCATTTCTTTCGATGCAAGGGATTGTTTTGTTTTCCAGATCAGTTGACATCCAAATATACAACTTCTGTGTGCATATATGATACAGACCACTTTCACTTCGTTTCATTAGAAAGATGCATATGTAAGATGTCTACAGCCATATCTCACTATCATTATCTGTCCATTCTTGCAAAATAGTTGTTATTTATATGATACTTCAACTTCTGAAAACGATCAAATTCACTAGAAACTAACAGAGGTGAGGGGCTTAATATACTGACCAGTCAAACATATTGGTGGTGAAGGATACACATCCGAGGAGTATAGAAGTAAAGGAGATTGCAACTAAGAAAAAGGAGAACTTACCAGTTGGTCTGAAGAGCTGCGGTTCACCATACATGGTGGTAAAGACGAAAGTTTGATTTGTTCCCTAGCACCATAAAATTAGACAATACAGTCAAACTTTAAACACGAAAACAAAATAAAGATTGGGACACAAAGTGGAAATGAGCATCCTCAGAGGAAGAGAAGTCAACTAACTTGATATTTTCTCTTTGCAGTAGGCTTCAATGGGCATTCCAGAAGACCACCAAACACGGCACCTAGCCGATCGCCAACAACCTATAGATCGCAGGGAAACACAACGCCATTATTAAACCAACATAAAGTTCTGCACTGGTTTAGCTTTTTAATAGGATTAAGATCTGGGACATGAATAAGTCATATAATTAACATACCAGCAAACAAGGACCAGAAAGTTCACCACTTTTGCGGATGAGTGTTCGAAGAGATATGCCATGTCTCAATGTACTGCCCCTCATTAGAAAGAAAGTCATGTTAAGGTCATAATGCACCACAATACTATCTACATATATCAACATTTCAAATAAATTACCTATATAACAAGACCCATTGACGCCCTTTCACGATATTAGGAAGACGTTGTAGCAGGAAATCATAGGTGTCAGTGGAAATCAGAACAGAATCAACCGTGAGATTTGTCACAATCTTTTCTGGACTACGTTGGCAAGTTTCTTCTTCAAATACTTCAGAACTACTAGTACTCCTTCCAGAGACAGAGTCATCAAAATCTTCCTCATTGTCTCGAATGTCTTTGTTCTCACATACTAAACTGCATTCCAATGGTTCTAAAGAATCAAAACTGACAATATCATATGGCACAGGGCGAGGCTGA

mRNA sequence

ATGGGCTGGTTTACGGACTCTCTTCTTCCCCGATCTCTCCTTCCATCTCCGCTTCGTCTCGTGCTGCCGGTTGCTGACTGCCCCAACGTTGCCGTCCGCTGTCGGGGAAAATCGTGCTCTGCTGCTACTGTACTCGTAAATTTCTCCGGTGAGATTCCGGAAGAGCCAGTTGTCTCCAAGAATTCTGGATTACTCTTCGAGAAGCGCTTAATCGAGAGGCACATTTTGGACTATGGGAAATGCCCTGTTACAGGTGAACCGCTTTCCATTGATGACATTGTTCCAATTAAAACCGGAAAGATAGTCAAGCCCAGGCAAGCTGCTAGCATCCCTGGAATGCTTGGAATGTTCCAGAACGAATGGGATGTTTTGGTGCTGTCGAATTTTGCATTAGAACAACAGCTGCATACAGCTAGACAGGAGCTTAGTCATGCCTTGTATCAGCATGATGCTGCATGTCGCGTGATTGCAAGACTTAAAAAGGAACGGGATGAGGCTAGGTCCTTACTTGCTCAGGCAGAGAGGCAGATGCCTTTGTCGGCAACTTCATTTTCATCCAATGCTGCTGCTGTCAATGTTAATGGGAAAAGAGTTAATGAGGATGAGGAATTGGGTCCTGATGGGAAGAAAATACGTCCAGGAATATCAGCCACTGTTATCTCTGAGCTCACAGATTGTAATGCTGCTCTATCACAACAAAGGAAGAGGCGGCAGATACCTCCTACGTTGGTTCCTGTTGAGGCTCTAGAAAGTTACACCCAGATTTCTAGTCATCCACTTCATAAAACAAGCAAACCAGGCATTATATCTCTTGACATCCATCATGAGAAGGATGTCATTGCGACTGGGGGGCTGGACACAAATGCTGTTCTTTTTGGTCGATCATCTGGGGAGATTTTATCTACACTAAGTGGCCATTCAAAGAAGGTAACAAGTGTCAAATTTGTGGGCCGAGATGATTTATTCTTGACCGGTTCAGCTGACAAGACTGTCCGTGTTTGGCAACAATCTGATGATGGGAACTACAATTGTAGGCACATTTTAAAGGATCATACAGCTGAGGTCCAAGCTGTTACCGTCCATGCTACCAATAACTTCTTTGTCACTGCCTCCCTTGATAACACATGGTGTTTTTATGAGCTTGCTTCGGGATTATGCCTGACCCAGGTTGCAGAGGATTCACAAACGGAGGGCTACACATCTGCTGCCTTTCATCCTGATGGTCTCATCCTTGGAACAGGCACGTCAGAGGCTCTTGTTAAAATTTGGGATGTAAAAAGTCAGAAAAATGTGGCCAAATTTGATGGACACGTTGGGGCAGTAACTGCAATATCTTTTTCTGAAAATGGTTATTTCCTTGCGACTGCAGCTCATGATGGAGTAAAGCTGTGGGACCTTCGAAAATTGAAGAACTTCCGTACATTTGCACCTTATGATTCAGAAACTCCAACAAACTCCGTGGACTTTGATCATAGTGGATCTTACCTTGCGATTGCTGGCTCAGACATAAGGGAAGGCAACTTGTCTAAAATTTGGACCGGATGCAAAATACTTGGCAGTCGGGTCAATGGATCGAAATCTTCGAATCTTTGGTGTGCCTGGGGAAGATGGTGCGATGGAGGCATGAGTTTGCATCCAGAACAGAAAAGATGGAAGCTAGTTTCTGATTATATTTGCACGATTACAGGATTGATTTATGGTATTAAGAAACAAGATTCTGAAGCAGAGGCGTCTTTGGAATGTTCTCCAGCAAACAAACAAGGACCAGAAAGTTCACCACTTTTGCGGATGAGTGTTCGAAGAGATATGCCATGTCTCAATGTACTGCCCCTCATTAGAAAGAAAGTGTCAGTGGAAATCAGAACAGAATCAACCGTGAGATTTGTCACAATCTTTTCTGGACTACGTTGGCAAGTTTCTTCTTCAAATACTTCAGAACTACTAGTACTCCTTCCAGAGACAGAGTCATCAAAATCTTCCTCATTGTCTCGAATGTCTTTGTTCTCACATACTAAACTGCATTCCAATGGTTCTAAAGAATCAAAACTGACAATATCATATGGCACAGGGCGAGGCTGA

Coding sequence (CDS)

ATGGGCTGGTTTACGGACTCTCTTCTTCCCCGATCTCTCCTTCCATCTCCGCTTCGTCTCGTGCTGCCGGTTGCTGACTGCCCCAACGTTGCCGTCCGCTGTCGGGGAAAATCGTGCTCTGCTGCTACTGTACTCGTAAATTTCTCCGGTGAGATTCCGGAAGAGCCAGTTGTCTCCAAGAATTCTGGATTACTCTTCGAGAAGCGCTTAATCGAGAGGCACATTTTGGACTATGGGAAATGCCCTGTTACAGGTGAACCGCTTTCCATTGATGACATTGTTCCAATTAAAACCGGAAAGATAGTCAAGCCCAGGCAAGCTGCTAGCATCCCTGGAATGCTTGGAATGTTCCAGAACGAATGGGATGTTTTGGTGCTGTCGAATTTTGCATTAGAACAACAGCTGCATACAGCTAGACAGGAGCTTAGTCATGCCTTGTATCAGCATGATGCTGCATGTCGCGTGATTGCAAGACTTAAAAAGGAACGGGATGAGGCTAGGTCCTTACTTGCTCAGGCAGAGAGGCAGATGCCTTTGTCGGCAACTTCATTTTCATCCAATGCTGCTGCTGTCAATGTTAATGGGAAAAGAGTTAATGAGGATGAGGAATTGGGTCCTGATGGGAAGAAAATACGTCCAGGAATATCAGCCACTGTTATCTCTGAGCTCACAGATTGTAATGCTGCTCTATCACAACAAAGGAAGAGGCGGCAGATACCTCCTACGTTGGTTCCTGTTGAGGCTCTAGAAAGTTACACCCAGATTTCTAGTCATCCACTTCATAAAACAAGCAAACCAGGCATTATATCTCTTGACATCCATCATGAGAAGGATGTCATTGCGACTGGGGGGCTGGACACAAATGCTGTTCTTTTTGGTCGATCATCTGGGGAGATTTTATCTACACTAAGTGGCCATTCAAAGAAGGTAACAAGTGTCAAATTTGTGGGCCGAGATGATTTATTCTTGACCGGTTCAGCTGACAAGACTGTCCGTGTTTGGCAACAATCTGATGATGGGAACTACAATTGTAGGCACATTTTAAAGGATCATACAGCTGAGGTCCAAGCTGTTACCGTCCATGCTACCAATAACTTCTTTGTCACTGCCTCCCTTGATAACACATGGTGTTTTTATGAGCTTGCTTCGGGATTATGCCTGACCCAGGTTGCAGAGGATTCACAAACGGAGGGCTACACATCTGCTGCCTTTCATCCTGATGGTCTCATCCTTGGAACAGGCACGTCAGAGGCTCTTGTTAAAATTTGGGATGTAAAAAGTCAGAAAAATGTGGCCAAATTTGATGGACACGTTGGGGCAGTAACTGCAATATCTTTTTCTGAAAATGGTTATTTCCTTGCGACTGCAGCTCATGATGGAGTAAAGCTGTGGGACCTTCGAAAATTGAAGAACTTCCGTACATTTGCACCTTATGATTCAGAAACTCCAACAAACTCCGTGGACTTTGATCATAGTGGATCTTACCTTGCGATTGCTGGCTCAGACATAAGGGAAGGCAACTTGTCTAAAATTTGGACCGGATGCAAAATACTTGGCAGTCGGGTCAATGGATCGAAATCTTCGAATCTTTGGTGTGCCTGGGGAAGATGGTGCGATGGAGGCATGAGTTTGCATCCAGAACAGAAAAGATGGAAGCTAGTTTCTGATTATATTTGCACGATTACAGGATTGATTTATGGTATTAAGAAACAAGATTCTGAAGCAGAGGCGTCTTTGGAATGTTCTCCAGCAAACAAACAAGGACCAGAAAGTTCACCACTTTTGCGGATGAGTGTTCGAAGAGATATGCCATGTCTCAATGTACTGCCCCTCATTAGAAAGAAAGTGTCAGTGGAAATCAGAACAGAATCAACCGTGAGATTTGTCACAATCTTTTCTGGACTACGTTGGCAAGTTTCTTCTTCAAATACTTCAGAACTACTAGTACTCCTTCCAGAGACAGAGTCATCAAAATCTTCCTCATTGTCTCGAATGTCTTTGTTCTCACATACTAAACTGCATTCCAATGGTTCTAAAGAATCAAAACTGACAATATCATATGGCACAGGGCGAGGCTGA

Protein sequence

MGWFTDSLLPRSLLPSPLRLVLPVADCPNVAVRCRGKSCSAATVLVNFSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSATSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDCNAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKIWTGCKILGSRVNGSKSSNLWCAWGRWCDGGMSLHPEQKRWKLVSDYICTITGLIYGIKKQDSEAEASLECSPANKQGPESSPLLRMSVRRDMPCLNVLPLIRKKVSVEIRTESTVRFVTIFSGLRWQVSSSNTSELLVLLPETESSKSSSLSRMSLFSHTKLHSNGSKESKLTISYGTGRG

Homology

[Close]

BLAST of CcUC05G085400 vs. NCBI nr
Match: TYK17345.1 (pre-mRNA-processing factor 19 [Cucumis melo var. makuwa])

HSP 1 Score: 917.9 bits (2371), Expect = 5.1e-263
Identity = 469/517 (90.72%), Postives = 480/517 (92.84%), Query Frame = 0


Query: 15  PSPLRLVLPVADCPNVAVRCRGKSCSAATVLVN----------FSGEIPEEPVVSKNSGL 74
           PSPLRL LP      VAV C G SCSAA  LVN           SGEIPEEPVVS+NSGL
Sbjct: 33  PSPLRLELP------VAVHCLGISCSAAAALVNRISPAKMNCSISGEIPEEPVVSRNSGL 92

Query: 75  LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL 134
           LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL
Sbjct: 93  LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL 152

Query: 135 VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSATSF 194
           VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLS+TSF
Sbjct: 153 VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSSTSF 212

Query: 195 SSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDCNAALSQQRKRRQIPPTLV 254
           SSNA AVNVNGKRVNEDEELGPDGKKIRPGIS TVISELT+CNAALSQQRKRRQIP TLV
Sbjct: 213 SSNAGAVNVNGKRVNEDEELGPDGKKIRPGISDTVISELTECNAALSQQRKRRQIPATLV 272

Query: 255 PVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLDTNAVLFGRSSGEILSTLS 314
           PVEALE+YTQISSHPLHKTSKPGI+SLDIHHEKDVIATGGLDTNAVLFGRSSGEILSTLS
Sbjct: 273 PVEALENYTQISSHPLHKTSKPGILSLDIHHEKDVIATGGLDTNAVLFGRSSGEILSTLS 332

Query: 315 GHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRHILKDHTAEVQAVTVHATN 374
           GHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRHILKDHTAEVQAVTVHATN
Sbjct: 333 GHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRHILKDHTAEVQAVTVHATN 392

Query: 375 NFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFHPDGLILGTGTSEALVKIWD 434
           +FFVTASLDNTWCFYELASGLCLTQVAEDS+TEGYTSAAFHPDGLILGTGTSEALVKIWD
Sbjct: 393 DFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAAFHPDGLILGTGTSEALVKIWD 452

Query: 435 VKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFAPYDSETPT 494
           VKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFAPYDS+TPT
Sbjct: 453 VKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFAPYDSDTPT 512

Query: 495 NSVDFDHSGSYLAIAGSDIREGNLSKI---WTGCKIL 519
           NSVDFDHSGSYLAIAGSDIR   ++ +   W   K L
Sbjct: 513 NSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTL 543

[Close]

BLAST of CcUC05G085400 vs. NCBI nr
Match: KAA0049213.1 (pre-mRNA-processing factor 19 [Cucumis melo var. makuwa])

HSP 1 Score: 903.3 bits (2333), Expect = 1.3e-258
Identity = 469/544 (86.21%), Postives = 480/544 (88.24%), Query Frame = 0


Query: 15  PSPLRLVLPVADCPNVAVRCRGKSCSAATVLVN----------FSGEIPEEPVVSKNSGL 74
           PSPLRL LP      VAV C G SCSAA  LVN           SGEIPEEPVVS+NSGL
Sbjct: 33  PSPLRLELP------VAVHCLGISCSAAAALVNRISPAKMNCSISGEIPEEPVVSRNSGL 92

Query: 75  LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL 134
           LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL
Sbjct: 93  LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL 152

Query: 135 VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSATSF 194
           VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLS+TSF
Sbjct: 153 VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSSTSF 212

Query: 195 SSNAAAVNVNGKR---------------------------VNEDEELGPDGKKIRPGISA 254
           SSNA AVNVNGKR                           VNEDEELGPDGKKIRPGIS 
Sbjct: 213 SSNAGAVNVNGKRGLASESSISMDFHEFLCSNLSRFFILSVNEDEELGPDGKKIRPGISD 272

Query: 255 TVISELTDCNAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEK 314
           TVISELT+CNAALSQQRKRRQIP TLVPVEALE+YTQISSHPLHKTSKPGI+SLDIHHEK
Sbjct: 273 TVISELTECNAALSQQRKRRQIPATLVPVEALENYTQISSHPLHKTSKPGILSLDIHHEK 332

Query: 315 DVIATGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQS 374
           DVIATGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQS
Sbjct: 333 DVIATGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQS 392

Query: 375 DDGNYNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTE 434
           DDGNYNCRHILKDHTAEVQAVTVHATN+FFVTASLDNTWCFYELASGLCLTQVAEDS+TE
Sbjct: 393 DDGNYNCRHILKDHTAEVQAVTVHATNDFFVTASLDNTWCFYELASGLCLTQVAEDSETE 452

Query: 435 GYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAA 494
           GYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAA
Sbjct: 453 GYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAA 512

Query: 495 HDGVKLWDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKI---WTG 519
           HDGVKLWDLRKLKNFRTFAPYDS+TPTNSVDFDHSGSYLAIAGSDIR   ++ +   W  
Sbjct: 513 HDGVKLWDLRKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNC 570

[Close]

BLAST of CcUC05G085400 vs. NCBI nr
Match: XP_038891633.1 (pre-mRNA-processing factor 19 [Benincasa hispida])

HSP 1 Score: 900.6 bits (2326), Expect = 8.5e-258
Identity = 450/458 (98.25%), Postives = 455/458 (99.34%), Query Frame = 0


Query: 47  NFSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 106
           + SGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ
Sbjct: 4   SISGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 63

Query: 107 AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 166
           AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA
Sbjct: 64  AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 123

Query: 167 RSLLAQAERQMPLSATSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 226
           RSLLAQAERQMPLS+TSFSSNA AVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC
Sbjct: 124 RSLLAQAERQMPLSSTSFSSNATAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 183

Query: 227 NAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLD 286
           NAALSQQRKRRQIPPTLVPVEALESY QISSHPLHKTSKPGIISLDI+HEKDVIATGGLD
Sbjct: 184 NAALSQQRKRRQIPPTLVPVEALESYNQISSHPLHKTSKPGIISLDINHEKDVIATGGLD 243

Query: 287 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 346
           TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNY+CRH
Sbjct: 244 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYDCRH 303

Query: 347 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFHP 406
           ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDS+TEGYTSAAFHP
Sbjct: 304 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAAFHP 363

Query: 407 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 466
           DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL
Sbjct: 364 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 423

Query: 467 RKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIR 505
           RKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIR
Sbjct: 424 RKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIR 461

[Close]

BLAST of CcUC05G085400 vs. NCBI nr
Match: XP_008438467.1 (PREDICTED: pre-mRNA-processing factor 19 [Cucumis melo])

HSP 1 Score: 894.8 bits (2311), Expect = 4.7e-256
Identity = 448/475 (94.32%), Postives = 460/475 (96.84%), Query Frame = 0


Query: 47  NFSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 106
           + SGEIPEEPVVS+NSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ
Sbjct: 4   SISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 63

Query: 107 AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 166
           AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA
Sbjct: 64  AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 123

Query: 167 RSLLAQAERQMPLSATSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 226
           RSLLAQAERQMPLS+TSFSSNA AVNVNGKRVNEDEELGPDGKKIRPGIS TVISELT+C
Sbjct: 124 RSLLAQAERQMPLSSTSFSSNAGAVNVNGKRVNEDEELGPDGKKIRPGISDTVISELTEC 183

Query: 227 NAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLD 286
           NAALSQQRKRRQIP TLVPVEALE+YTQISSHPLHKTSKPGI+SLDIHHEKDVIATGGLD
Sbjct: 184 NAALSQQRKRRQIPATLVPVEALENYTQISSHPLHKTSKPGILSLDIHHEKDVIATGGLD 243

Query: 287 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 346
           TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH
Sbjct: 244 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 303

Query: 347 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFHP 406
           ILKDHTAEVQAVTVHATN+FFVTASLDNTWCFYELASGLCLTQVAEDS+TEGYTSAAFHP
Sbjct: 304 ILKDHTAEVQAVTVHATNDFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAAFHP 363

Query: 407 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 466
           DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL
Sbjct: 364 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 423

Query: 467 RKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKI---WTGCKIL 519
           RKLKNFRTFAPYDS+TPTNSVDFDHSGSYLAIAGSDIR   ++ +   W   K L
Sbjct: 424 RKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTL 478

[Close]

BLAST of CcUC05G085400 vs. NCBI nr
Match: XP_004134043.1 (pre-mRNA-processing factor 19 [Cucumis sativus])

HSP 1 Score: 891.3 bits (2302), Expect = 5.2e-255
Identity = 447/475 (94.11%), Postives = 459/475 (96.63%), Query Frame = 0


Query: 47  NFSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 106
           + SGEIPEEPVVS+NSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ
Sbjct: 4   SISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 63

Query: 107 AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 166
           AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA
Sbjct: 64  AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 123

Query: 167 RSLLAQAERQMPLSATSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 226
           RSLLA AERQMPLS+TSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGIS  VISELT+C
Sbjct: 124 RSLLALAERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISDAVISELTEC 183

Query: 227 NAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLD 286
           NAALSQQRKRRQIP TLVPVEALE+YTQISSHPLHKTSKPGI+SLDIHHEKDVIATGGLD
Sbjct: 184 NAALSQQRKRRQIPATLVPVEALENYTQISSHPLHKTSKPGIMSLDIHHEKDVIATGGLD 243

Query: 287 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 346
           TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH
Sbjct: 244 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 303

Query: 347 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFHP 406
           ILKDHTAEVQAVTVHATN+FFVTASLDNTWCFYELASGLCLTQVAEDS+TEGYTSAAFHP
Sbjct: 304 ILKDHTAEVQAVTVHATNDFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAAFHP 363

Query: 407 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 466
           DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL
Sbjct: 364 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 423

Query: 467 RKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKI---WTGCKIL 519
           RKLKNFRTFAPYDS+TPTNSVDFDHSGSYLAIAGSDIR   ++ +   W   K L
Sbjct: 424 RKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTL 478

[Close]

BLAST of CcUC05G085400 vs. ExPASy Swiss-Prot
Match: Q9AV81 (Pre-mRNA-processing factor 19 OS=Oryza sativa subsp. japonica OX=39947 GN=PRP19 PE=2 SV=1)

HSP 1 Score: 708.8 bits (1828), Expect = 6.2e-203
Identity = 350/487 (71.87%), Postives = 410/487 (84.19%), Query Frame = 0


Query: 49  SGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPR--Q 108
           SGE+P+EPVVSK SGLLFE+RL+ER+I D+GKCPVT E L++DDIV +KT K+VKPR  Q
Sbjct: 6   SGEVPDEPVVSKKSGLLFERRLVERYIEDHGKCPVTKEELTMDDIVAVKTNKVVKPRQLQ 65

Query: 109 AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 168
           AASIPG+LGMFQNEWD ++LS+FALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA
Sbjct: 66  AASIPGLLGMFQNEWDAIMLSSFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 125

Query: 169 RSLLAQAERQMPLSATSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 228
           R+LLAQAERQ+P  A+   +   AV  NGKR  ED E+GPDGKKIRPGI+  +I ELT+C
Sbjct: 126 RALLAQAERQIP--ASMAGAAPTAVVSNGKRAFED-EVGPDGKKIRPGINPVMIDELTEC 185

Query: 229 NAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLD 288
           N  LS  RK+RQ+PPTL  ++A+E YTQISSHPLHKT+KPGI+S+DIH  KD+IATGG+D
Sbjct: 186 NTMLSAHRKKRQVPPTLASIDAIERYTQISSHPLHKTNKPGILSMDIHPSKDIIATGGID 245

Query: 289 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 348
           TNAVLF R SG+IL TL+GHSKK+TS+KFV RD+LF+TGSADKTV++WQ S++GNYNC H
Sbjct: 246 TNAVLFDRPSGQILCTLTGHSKKITSLKFVPRDELFVTGSADKTVKIWQGSEEGNYNCIH 305

Query: 349 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFHP 408
            LKDHTAEV+AVTVHAT  +FVTAS DNTWCFY++ SG CLTQV E S  EGYTSA+FHP
Sbjct: 306 TLKDHTAEVEAVTVHATQKYFVTASKDNTWCFYDIPSGSCLTQVGESSGQEGYTSASFHP 365

Query: 409 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 468
           DGLILGTGT+EA+VKIWDVK+Q NVAKF+GHVG VTA+SFSENGYFLATAA DGVKLWDL
Sbjct: 366 DGLILGTGTTEAVVKIWDVKTQSNVAKFEGHVGPVTAMSFSENGYFLATAALDGVKLWDL 425

Query: 469 RKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIR---EGNLSKIWTGCKILGSRVN 528
           RKL+NFRT +PYDS+TPTNSV+FD SGSYLA+ GSD R     N+   W   K L     
Sbjct: 426 RKLRNFRTISPYDSDTPTNSVEFDFSGSYLAVGGSDTRVYQVANVKLEWNLVKTLPDLSG 485

Query: 529 GSKSSNL 531
             K +N+
Sbjct: 486 TGKVTNV 489

[Close]

BLAST of CcUC05G085400 vs. ExPASy Swiss-Prot
Match: Q94BR4 (Pre-mRNA-processing factor 19 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=PRP19A PE=1 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 7.6e-193
Identity = 345/488 (70.70%), Postives = 401/488 (82.17%), Query Frame = 0


Query: 49  SGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPR--Q 108
           SGE+PEEPVVSK SGLL+EKRLI+ HI DYGKCPVTGEP ++DDIVPIKTGKIVKP+   
Sbjct: 6   SGEVPEEPVVSKKSGLLYEKRLIQTHISDYGKCPVTGEPHTLDDIVPIKTGKIVKPKPLH 65

Query: 109 AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 168
            ASIPG+LG FQ EWD L+LSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDE+
Sbjct: 66  TASIPGLLGTFQTEWDSLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDES 125

Query: 169 RSLLAQAERQMPLSATSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 228
           R LLA+AERQ+P +    +SNAA    NGKR  +D E GP+ KK+R GISA VI+ELTDC
Sbjct: 126 RQLLAEAERQLPAAPEVATSNAAL--SNGKRGIDDGEQGPNAKKMRLGISAEVITELTDC 185

Query: 229 NAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLD 288
           NAALSQQRK+RQIP TL  V+ALE +TQ+SSHPLHKT+KPGI S+DI H KDVIATGG+D
Sbjct: 186 NAALSQQRKKRQIPKTLASVDALEKFTQLSSHPLHKTNKPGIFSMDILHSKDVIATGGID 245

Query: 289 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 348
           T AVLF R SG+ILSTL+GHSKKVTS+KFVG  DL LT S+DKTVR+W  S+DGNY  RH
Sbjct: 246 TTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRH 305

Query: 349 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTE-GYTSAAFH 408
            LKDH+AEV+AVTVHATN +FV+ASLD+TWCFY+L+SGLCL QV + S+ +  YT+AAFH
Sbjct: 306 TLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFH 365

Query: 409 PDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWD 468
           PDGLILGTGT++++VKIWDVKSQ NVAKF GH G +T+ISFSENGYFLATAA DGV+LWD
Sbjct: 366 PDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDGVRLWD 425

Query: 469 LRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKI---WTGCKILGSRV 528
           LRKLKNFRTF   D+    NSV+FDHSGSYL IA SDIR    + +   W   K L    
Sbjct: 426 LRKLKNFRTFDFPDA----NSVEFDHSGSYLGIAASDIRVFQAASVKAEWNPIKTLPDLS 485

Query: 529 NGSKSSNL 531
              K++++
Sbjct: 486 GTGKATSV 487

[Close]

BLAST of CcUC05G085400 vs. ExPASy Swiss-Prot
Match: O22785 (Pre-mRNA-processing factor 19 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=PRP19B PE=1 SV=3)

HSP 1 Score: 672.9 bits (1735), Expect = 3.8e-192
Identity = 334/458 (72.93%), Postives = 386/458 (84.28%), Query Frame = 0


Query: 49  SGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPR--Q 108
           SGE+P EPVVS  SGLLFE+RLIERHI DYGKCPVTGEPL+IDDIVPIKTG+I+KP+   
Sbjct: 6   SGEVPVEPVVSTKSGLLFERRLIERHISDYGKCPVTGEPLTIDDIVPIKTGEIIKPKTLH 65

Query: 109 AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 168
            ASIPG+LG FQNEWD L+LSNFALEQQLHTARQELSHALYQHD+ACRVIARLKKERDEA
Sbjct: 66  TASIPGLLGTFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDSACRVIARLKKERDEA 125

Query: 169 RSLLAQAERQMPLSATSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 228
           R LLA+ ER +P +  + ++NAA    NGKR   DEELGPD KK+ PGISA +I+ELTDC
Sbjct: 126 RQLLAEVERHIPAAPEAVTANAAL--SNGKRAAVDEELGPDAKKLCPGISAEIITELTDC 185

Query: 229 NAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLD 288
           NAALSQ+RK+RQIP TL  ++ LE +TQ+SSHPLHKT+KPGI S+DI H KDVIATGG+D
Sbjct: 186 NAALSQKRKKRQIPQTLASIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDVIATGGVD 245

Query: 289 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 348
             AVLF R SG+ILSTL+GHSKKVTSVKFVG  DL LT SADKTVR+W+   DGNY C +
Sbjct: 246 ATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGY 305

Query: 349 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFHP 408
            L DH+AEV+AVTVH TN +FV+ASLD TWCFY+L+SG CL QV++DS+   YT+AAFHP
Sbjct: 306 TLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHP 365

Query: 409 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 468
           DGLILGTGTS+++VKIWDVKSQ NVAKFDGH G VTAISFSENGYFLATAA DGV+LWDL
Sbjct: 366 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVRLWDL 425

Query: 469 RKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIR 505
           RKL+NF++F   D+    NSV+FD SGSYL IA SDI+
Sbjct: 426 RKLRNFKSFLSADA----NSVEFDPSGSYLGIAASDIK 457

[Close]

BLAST of CcUC05G085400 vs. ExPASy Swiss-Prot
Match: Q9UMS4 (Pre-mRNA-processing factor 19 OS=Homo sapiens OX=9606 GN=PRPF19 PE=1 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 6.8e-101
Identity = 209/480 (43.54%), Postives = 297/480 (61.88%), Query Frame = 0


Query: 43  TVLVNFSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIV 102
           +++ + S E+PE P VS  S  ++E+RLIE++I + G  P+  +PLS + ++ IK    +
Sbjct: 2   SLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPI 61

Query: 103 KPR--QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLK 162
           +P+   A SIP +L   Q+EWD ++L +F L QQL T RQELSHALYQHDAACRVIARL 
Sbjct: 62  RPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLT 121

Query: 163 KERDEARSLLAQAERQMPLSATSF--SSNAAAVNVNGKRVNEDEELGPDGKKIRPGISAT 222
           KE   AR  LA  + Q  L       SS  + V        E  +LG        G++  
Sbjct: 122 KEVTAAREALATLKPQAGLIVPQAVPSSQPSVVG-----AGEPMDLGE-----LVGMTPE 181

Query: 223 VISELTDCNAALSQQRKRR--QIPPTLVPVEALESYTQISSH-PLHKTSKPGIISLDI-H 282
           +I +L D    L+ +RK+R   +P  LV  E L  Y Q++SH  LH  S PGI++LD+  
Sbjct: 182 IIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCP 241

Query: 283 HEKDVIATGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVW 342
            + + I TGG D N V+F +SS +IL+TL GH+KKVTSV F    DL  + S D T+R+W
Sbjct: 242 SDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIW 301

Query: 343 QQSDDGNYNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDS 402
                 N +C  +++ H + V  +++HAT ++ +++S D  W F ++ +G  LT+V +++
Sbjct: 302 SVP---NASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDET 361

Query: 403 QTEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLA 462
                T A FHPDGLI GTGT ++ +KIWD+K + NVA F GH G +T+I+FSENGY+LA
Sbjct: 362 SGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLA 421

Query: 463 TAAHD-GVKLWDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKIWT 514
           TAA D  VKLWDLRKLKNF+T    D+     S+ FD SG+YLA+ G+D+ +  + K WT
Sbjct: 422 TAADDSSVKLWDLRKLKNFKTL-QLDNNFEVKSLIFDQSGTYLALGGTDV-QIYICKQWT 466

[Close]

BLAST of CcUC05G085400 vs. ExPASy Swiss-Prot
Match: Q08E38 (Pre-mRNA-processing factor 19 OS=Bos taurus OX=9913 GN=PRPF19 PE=2 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.0e-100
Identity = 208/480 (43.33%), Postives = 297/480 (61.88%), Query Frame = 0


Query: 43  TVLVNFSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIV 102
           +++ + S E+PE P VS  S  ++E+RLIE++I + G  P+  +PLS + ++ IK    +
Sbjct: 2   SLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPI 61

Query: 103 KPR--QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLK 162
           +P+   A SIP +L   Q+EWD ++L +F L QQL T RQELSHALYQHDAACRVIARL 
Sbjct: 62  RPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLT 121

Query: 163 KERDEARSLLAQAERQMPLSATSF--SSNAAAVNVNGKRVNEDEELGPDGKKIRPGISAT 222
           KE   AR  LA  + Q  L       SS  + V        E  +LG        G++  
Sbjct: 122 KEVTAAREALATLKPQAGLIVPQAVPSSQPSVVG-----AGEPMDLGE-----LVGMTPE 181

Query: 223 VISELTDCNAALSQQRKRR--QIPPTLVPVEALESYTQISSH-PLHKTSKPGIISLDI-H 282
           +I +L D    L+ +RK+R   +P  LV  E L  Y Q++SH  LH  S PGI++LD+  
Sbjct: 182 IIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCP 241

Query: 283 HEKDVIATGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVW 342
            + + I TGG D N V+F +SS +IL+TL GH+KKVTSV F    +L  + S D T+R+W
Sbjct: 242 SDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIW 301

Query: 343 QQSDDGNYNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDS 402
                 N +C  +++ H + V  +++HAT ++ +++S D  W F ++ +G  LT+V +++
Sbjct: 302 SVP---NASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDET 361

Query: 403 QTEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLA 462
                T A FHPDGLI GTGT ++ +KIWD+K + NVA F GH G +T+I+FSENGY+LA
Sbjct: 362 SGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLA 421

Query: 463 TAAHD-GVKLWDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKIWT 514
           TAA D  VKLWDLRKLKNF+T    D+     S+ FD SG+YLA+ G+D+ +  + K WT
Sbjct: 422 TAADDSSVKLWDLRKLKNFKTL-QLDNNFEVKSLIFDQSGTYLALGGTDV-QIYICKQWT 466

[Close]

BLAST of CcUC05G085400 vs. ExPASy TrEMBL
Match: A0A5D3D0U3 (Pre-mRNA-processing factor 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002000 PE=3 SV=1)

HSP 1 Score: 917.9 bits (2371), Expect = 2.5e-263
Identity = 469/517 (90.72%), Postives = 480/517 (92.84%), Query Frame = 0


Query: 15  PSPLRLVLPVADCPNVAVRCRGKSCSAATVLVN----------FSGEIPEEPVVSKNSGL 74
           PSPLRL LP      VAV C G SCSAA  LVN           SGEIPEEPVVS+NSGL
Sbjct: 33  PSPLRLELP------VAVHCLGISCSAAAALVNRISPAKMNCSISGEIPEEPVVSRNSGL 92

Query: 75  LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL 134
           LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL
Sbjct: 93  LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL 152

Query: 135 VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSATSF 194
           VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLS+TSF
Sbjct: 153 VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSSTSF 212

Query: 195 SSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDCNAALSQQRKRRQIPPTLV 254
           SSNA AVNVNGKRVNEDEELGPDGKKIRPGIS TVISELT+CNAALSQQRKRRQIP TLV
Sbjct: 213 SSNAGAVNVNGKRVNEDEELGPDGKKIRPGISDTVISELTECNAALSQQRKRRQIPATLV 272

Query: 255 PVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLDTNAVLFGRSSGEILSTLS 314
           PVEALE+YTQISSHPLHKTSKPGI+SLDIHHEKDVIATGGLDTNAVLFGRSSGEILSTLS
Sbjct: 273 PVEALENYTQISSHPLHKTSKPGILSLDIHHEKDVIATGGLDTNAVLFGRSSGEILSTLS 332

Query: 315 GHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRHILKDHTAEVQAVTVHATN 374
           GHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRHILKDHTAEVQAVTVHATN
Sbjct: 333 GHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRHILKDHTAEVQAVTVHATN 392

Query: 375 NFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFHPDGLILGTGTSEALVKIWD 434
           +FFVTASLDNTWCFYELASGLCLTQVAEDS+TEGYTSAAFHPDGLILGTGTSEALVKIWD
Sbjct: 393 DFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAAFHPDGLILGTGTSEALVKIWD 452

Query: 435 VKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFAPYDSETPT 494
           VKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFAPYDS+TPT
Sbjct: 453 VKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFAPYDSDTPT 512

Query: 495 NSVDFDHSGSYLAIAGSDIREGNLSKI---WTGCKIL 519
           NSVDFDHSGSYLAIAGSDIR   ++ +   W   K L
Sbjct: 513 NSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTL 543

[Close]

BLAST of CcUC05G085400 vs. ExPASy TrEMBL
Match: A0A5A7U025 (Pre-mRNA-processing factor 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G004530 PE=3 SV=1)

HSP 1 Score: 903.3 bits (2333), Expect = 6.3e-259
Identity = 469/544 (86.21%), Postives = 480/544 (88.24%), Query Frame = 0


Query: 15  PSPLRLVLPVADCPNVAVRCRGKSCSAATVLVN----------FSGEIPEEPVVSKNSGL 74
           PSPLRL LP      VAV C G SCSAA  LVN           SGEIPEEPVVS+NSGL
Sbjct: 33  PSPLRLELP------VAVHCLGISCSAAAALVNRISPAKMNCSISGEIPEEPVVSRNSGL 92

Query: 75  LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL 134
           LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL
Sbjct: 93  LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL 152

Query: 135 VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSATSF 194
           VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLS+TSF
Sbjct: 153 VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSSTSF 212

Query: 195 SSNAAAVNVNGKR---------------------------VNEDEELGPDGKKIRPGISA 254
           SSNA AVNVNGKR                           VNEDEELGPDGKKIRPGIS 
Sbjct: 213 SSNAGAVNVNGKRGLASESSISMDFHEFLCSNLSRFFILSVNEDEELGPDGKKIRPGISD 272

Query: 255 TVISELTDCNAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEK 314
           TVISELT+CNAALSQQRKRRQIP TLVPVEALE+YTQISSHPLHKTSKPGI+SLDIHHEK
Sbjct: 273 TVISELTECNAALSQQRKRRQIPATLVPVEALENYTQISSHPLHKTSKPGILSLDIHHEK 332

Query: 315 DVIATGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQS 374
           DVIATGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQS
Sbjct: 333 DVIATGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQS 392

Query: 375 DDGNYNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTE 434
           DDGNYNCRHILKDHTAEVQAVTVHATN+FFVTASLDNTWCFYELASGLCLTQVAEDS+TE
Sbjct: 393 DDGNYNCRHILKDHTAEVQAVTVHATNDFFVTASLDNTWCFYELASGLCLTQVAEDSETE 452

Query: 435 GYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAA 494
           GYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAA
Sbjct: 453 GYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAA 512

Query: 495 HDGVKLWDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKI---WTG 519
           HDGVKLWDLRKLKNFRTFAPYDS+TPTNSVDFDHSGSYLAIAGSDIR   ++ +   W  
Sbjct: 513 HDGVKLWDLRKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNC 570

[Close]

BLAST of CcUC05G085400 vs. ExPASy TrEMBL
Match: A0A1S3AWF5 (Pre-mRNA-processing factor 19 OS=Cucumis melo OX=3656 GN=LOC103483553 PE=3 SV=1)

HSP 1 Score: 894.8 bits (2311), Expect = 2.3e-256
Identity = 448/475 (94.32%), Postives = 460/475 (96.84%), Query Frame = 0


Query: 47  NFSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 106
           + SGEIPEEPVVS+NSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ
Sbjct: 4   SISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 63

Query: 107 AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 166
           AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA
Sbjct: 64  AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 123

Query: 167 RSLLAQAERQMPLSATSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 226
           RSLLAQAERQMPLS+TSFSSNA AVNVNGKRVNEDEELGPDGKKIRPGIS TVISELT+C
Sbjct: 124 RSLLAQAERQMPLSSTSFSSNAGAVNVNGKRVNEDEELGPDGKKIRPGISDTVISELTEC 183

Query: 227 NAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLD 286
           NAALSQQRKRRQIP TLVPVEALE+YTQISSHPLHKTSKPGI+SLDIHHEKDVIATGGLD
Sbjct: 184 NAALSQQRKRRQIPATLVPVEALENYTQISSHPLHKTSKPGILSLDIHHEKDVIATGGLD 243

Query: 287 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 346
           TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH
Sbjct: 244 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 303

Query: 347 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFHP 406
           ILKDHTAEVQAVTVHATN+FFVTASLDNTWCFYELASGLCLTQVAEDS+TEGYTSAAFHP
Sbjct: 304 ILKDHTAEVQAVTVHATNDFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAAFHP 363

Query: 407 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 466
           DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL
Sbjct: 364 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 423

Query: 467 RKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKI---WTGCKIL 519
           RKLKNFRTFAPYDS+TPTNSVDFDHSGSYLAIAGSDIR   ++ +   W   K L
Sbjct: 424 RKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTL 478

[Close]

BLAST of CcUC05G085400 vs. ExPASy TrEMBL
Match: A0A0A0L6Z6 (Pre-mRNA-processing factor 19 OS=Cucumis sativus OX=3659 GN=Csa_3G134680 PE=3 SV=1)

HSP 1 Score: 891.3 bits (2302), Expect = 2.5e-255
Identity = 447/475 (94.11%), Postives = 459/475 (96.63%), Query Frame = 0


Query: 47  NFSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 106
           + SGEIPEEPVVS+NSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ
Sbjct: 4   SISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 63

Query: 107 AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 166
           AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA
Sbjct: 64  AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 123

Query: 167 RSLLAQAERQMPLSATSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 226
           RSLLA AERQMPLS+TSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGIS  VISELT+C
Sbjct: 124 RSLLALAERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISDAVISELTEC 183

Query: 227 NAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLD 286
           NAALSQQRKRRQIP TLVPVEALE+YTQISSHPLHKTSKPGI+SLDIHHEKDVIATGGLD
Sbjct: 184 NAALSQQRKRRQIPATLVPVEALENYTQISSHPLHKTSKPGIMSLDIHHEKDVIATGGLD 243

Query: 287 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 346
           TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH
Sbjct: 244 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 303

Query: 347 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFHP 406
           ILKDHTAEVQAVTVHATN+FFVTASLDNTWCFYELASGLCLTQVAEDS+TEGYTSAAFHP
Sbjct: 304 ILKDHTAEVQAVTVHATNDFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAAFHP 363

Query: 407 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 466
           DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL
Sbjct: 364 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 423

Query: 467 RKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKI---WTGCKIL 519
           RKLKNFRTFAPYDS+TPTNSVDFDHSGSYLAIAGSDIR   ++ +   W   K L
Sbjct: 424 RKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTL 478

[Close]

BLAST of CcUC05G085400 vs. ExPASy TrEMBL
Match: A0A6J1FIG8 (Pre-mRNA-processing factor 19 OS=Cucurbita moschata OX=3662 GN=LOC111445620 PE=3 SV=1)

HSP 1 Score: 883.2 bits (2281), Expect = 6.8e-253
Identity = 443/458 (96.72%), Postives = 452/458 (98.69%), Query Frame = 0


Query: 47  NFSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 106
           + SGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ
Sbjct: 4   SISGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 63

Query: 107 AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 166
           AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA
Sbjct: 64  AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 123

Query: 167 RSLLAQAERQMPLSATSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 226
           RSLLAQAERQMPLS+TS SSN AAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC
Sbjct: 124 RSLLAQAERQMPLSSTSISSN-AAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 183

Query: 227 NAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLD 286
           NA+LSQQRK+RQIPPTLVPVEALESYTQISSHPLHKT+KPGIISLDI+HEKDVIATGGLD
Sbjct: 184 NASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATGGLD 243

Query: 287 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 346
           TNAVLFGRSSGEILSTLSGHSKKVTSVKFV RDDLFLTGSADKTVRVWQ SDDGNYNCRH
Sbjct: 244 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYNCRH 303

Query: 347 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFHP 406
           ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFY+LASGLCLTQVAEDS TEGYTSAAFHP
Sbjct: 304 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEDSGTEGYTSAAFHP 363

Query: 407 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 466
           DGLILGTGTSEALVKIWDVKSQKNVA+FDGHVGAVTAISFSENGYFLATAAHDGVKLWDL
Sbjct: 364 DGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 423

Query: 467 RKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIR 505
           RKLKNFRTFAPYDSETPTNSV+FDHSGSYLAIAGSDIR
Sbjct: 424 RKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIR 460

[Close]

BLAST of CcUC05G085400 vs. TAIR 10
Match: AT1G04510.2 (MOS4-associated complex 3A )

HSP 1 Score: 676.4 bits (1744), Expect = 2.4e-194
Identity = 346/488 (70.90%), Postives = 401/488 (82.17%), Query Frame = 0


Query: 49  SGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPR--Q 108
           SGE+PEEPVVSK SGLL+EKRLI+ HI DYGKCPVTGEP ++DDIVPIKTGKIVKP+   
Sbjct: 6   SGEVPEEPVVSKKSGLLYEKRLIQTHISDYGKCPVTGEPHTLDDIVPIKTGKIVKPKPLH 65

Query: 109 AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 168
            ASIPG+LG FQ EWD L+LSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDE+
Sbjct: 66  TASIPGLLGTFQTEWDSLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDES 125

Query: 169 RSLLAQAERQMPLSATSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 228
           R LLA+AERQ+P +    +SNAA    NGKR  +D E GP+ KK+R GISA VI+ELTDC
Sbjct: 126 RQLLAEAERQLPAAPEVATSNAAL--SNGKRGIDDGEQGPNAKKMRLGISAEVITELTDC 185

Query: 229 NAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLD 288
           NAALSQQRK+RQIP TL  V+ALE +TQ+SSHPLHKT+KPGI S+DI H KDVIATGG+D
Sbjct: 186 NAALSQQRKKRQIPKTLASVDALEKFTQLSSHPLHKTNKPGIFSMDILHSKDVIATGGID 245

Query: 289 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 348
           T AVLF R SG+ILSTL+GHSKKVTS+KFVG  DL LT S+DKTVR+W  S+DGNY  RH
Sbjct: 246 TTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRH 305

Query: 349 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTE-GYTSAAFH 408
            LKDH+AEV+AVTVHATN +FV+ASLD+TWCFY+L+SGLCL QV + S+ +  YT+AAFH
Sbjct: 306 TLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFH 365

Query: 409 PDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWD 468
           PDGLILGTGT++++VKIWDVKSQ NVAKF GH G +T+ISFSENGYFLATAA DGV+LWD
Sbjct: 366 PDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDGVRLWD 425

Query: 469 LRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKI---WTGCKILGSRV 528
           LRKLKNFRTF   D+    NSV+FDHSGSYL IA SDIR    + +   W   K L    
Sbjct: 426 LRKLKNFRTFDFPDA----NSVEFDHSGSYLGIAASDIRVFQAASVKAEWNPIKTLPDLS 485

Query: 529 NGSKSSNL 531
              KS+++
Sbjct: 486 GTGKSTSV 487

[Close]

BLAST of CcUC05G085400 vs. TAIR 10
Match: AT1G04510.1 (MOS4-associated complex 3A )

HSP 1 Score: 675.2 bits (1741), Expect = 5.4e-194
Identity = 345/488 (70.70%), Postives = 401/488 (82.17%), Query Frame = 0


Query: 49  SGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPR--Q 108
           SGE+PEEPVVSK SGLL+EKRLI+ HI DYGKCPVTGEP ++DDIVPIKTGKIVKP+   
Sbjct: 6   SGEVPEEPVVSKKSGLLYEKRLIQTHISDYGKCPVTGEPHTLDDIVPIKTGKIVKPKPLH 65

Query: 109 AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 168
            ASIPG+LG FQ EWD L+LSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDE+
Sbjct: 66  TASIPGLLGTFQTEWDSLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDES 125

Query: 169 RSLLAQAERQMPLSATSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 228
           R LLA+AERQ+P +    +SNAA    NGKR  +D E GP+ KK+R GISA VI+ELTDC
Sbjct: 126 RQLLAEAERQLPAAPEVATSNAAL--SNGKRGIDDGEQGPNAKKMRLGISAEVITELTDC 185

Query: 229 NAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLD 288
           NAALSQQRK+RQIP TL  V+ALE +TQ+SSHPLHKT+KPGI S+DI H KDVIATGG+D
Sbjct: 186 NAALSQQRKKRQIPKTLASVDALEKFTQLSSHPLHKTNKPGIFSMDILHSKDVIATGGID 245

Query: 289 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 348
           T AVLF R SG+ILSTL+GHSKKVTS+KFVG  DL LT S+DKTVR+W  S+DGNY  RH
Sbjct: 246 TTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRH 305

Query: 349 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTE-GYTSAAFH 408
            LKDH+AEV+AVTVHATN +FV+ASLD+TWCFY+L+SGLCL QV + S+ +  YT+AAFH
Sbjct: 306 TLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFH 365

Query: 409 PDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWD 468
           PDGLILGTGT++++VKIWDVKSQ NVAKF GH G +T+ISFSENGYFLATAA DGV+LWD
Sbjct: 366 PDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDGVRLWD 425

Query: 469 LRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKI---WTGCKILGSRV 528
           LRKLKNFRTF   D+    NSV+FDHSGSYL IA SDIR    + +   W   K L    
Sbjct: 426 LRKLKNFRTFDFPDA----NSVEFDHSGSYLGIAASDIRVFQAASVKAEWNPIKTLPDLS 485

Query: 529 NGSKSSNL 531
              K++++
Sbjct: 486 GTGKATSV 487

[Close]

BLAST of CcUC05G085400 vs. TAIR 10
Match: AT2G33340.1 (MOS4-associated complex 3B )

HSP 1 Score: 672.9 bits (1735), Expect = 2.7e-193
Identity = 334/458 (72.93%), Postives = 386/458 (84.28%), Query Frame = 0


Query: 49  SGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPR--Q 108
           SGE+P EPVVS  SGLLFE+RLIERHI DYGKCPVTGEPL+IDDIVPIKTG+I+KP+   
Sbjct: 6   SGEVPVEPVVSTKSGLLFERRLIERHISDYGKCPVTGEPLTIDDIVPIKTGEIIKPKTLH 65

Query: 109 AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 168
            ASIPG+LG FQNEWD L+LSNFALEQQLHTARQELSHALYQHD+ACRVIARLKKERDEA
Sbjct: 66  TASIPGLLGTFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDSACRVIARLKKERDEA 125

Query: 169 RSLLAQAERQMPLSATSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 228
           R LLA+ ER +P +  + ++NAA    NGKR   DEELGPD KK+ PGISA +I+ELTDC
Sbjct: 126 RQLLAEVERHIPAAPEAVTANAAL--SNGKRAAVDEELGPDAKKLCPGISAEIITELTDC 185

Query: 229 NAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLD 288
           NAALSQ+RK+RQIP TL  ++ LE +TQ+SSHPLHKT+KPGI S+DI H KDVIATGG+D
Sbjct: 186 NAALSQKRKKRQIPQTLASIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDVIATGGVD 245

Query: 289 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 348
             AVLF R SG+ILSTL+GHSKKVTSVKFVG  DL LT SADKTVR+W+   DGNY C +
Sbjct: 246 ATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGY 305

Query: 349 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFHP 408
            L DH+AEV+AVTVH TN +FV+ASLD TWCFY+L+SG CL QV++DS+   YT+AAFHP
Sbjct: 306 TLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHP 365

Query: 409 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 468
           DGLILGTGTS+++VKIWDVKSQ NVAKFDGH G VTAISFSENGYFLATAA DGV+LWDL
Sbjct: 366 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVRLWDL 425

Query: 469 RKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIR 505
           RKL+NF++F   D+    NSV+FD SGSYL IA SDI+
Sbjct: 426 RKLRNFKSFLSADA----NSVEFDPSGSYLGIAASDIK 457

[Close]

BLAST of CcUC05G085400 vs. TAIR 10
Match: AT2G33340.2 (MOS4-associated complex 3B )

HSP 1 Score: 672.9 bits (1735), Expect = 2.7e-193
Identity = 334/458 (72.93%), Postives = 386/458 (84.28%), Query Frame = 0


Query: 49  SGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPR--Q 108
           SGE+P EPVVS  SGLLFE+RLIERHI DYGKCPVTGEPL+IDDIVPIKTG+I+KP+   
Sbjct: 6   SGEVPVEPVVSTKSGLLFERRLIERHISDYGKCPVTGEPLTIDDIVPIKTGEIIKPKTLH 65

Query: 109 AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 168
            ASIPG+LG FQNEWD L+LSNFALEQQLHTARQELSHALYQHD+ACRVIARLKKERDEA
Sbjct: 66  TASIPGLLGTFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDSACRVIARLKKERDEA 125

Query: 169 RSLLAQAERQMPLSATSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 228
           R LLA+ ER +P +  + ++NAA    NGKR   DEELGPD KK+ PGISA +I+ELTDC
Sbjct: 126 RQLLAEVERHIPAAPEAVTANAAL--SNGKRAAVDEELGPDAKKLCPGISAEIITELTDC 185

Query: 229 NAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLD 288
           NAALSQ+RK+RQIP TL  ++ LE +TQ+SSHPLHKT+KPGI S+DI H KDVIATGG+D
Sbjct: 186 NAALSQKRKKRQIPQTLASIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDVIATGGVD 245

Query: 289 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 348
             AVLF R SG+ILSTL+GHSKKVTSVKFVG  DL LT SADKTVR+W+   DGNY C +
Sbjct: 246 ATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGY 305

Query: 349 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFHP 408
            L DH+AEV+AVTVH TN +FV+ASLD TWCFY+L+SG CL QV++DS+   YT+AAFHP
Sbjct: 306 TLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHP 365

Query: 409 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 468
           DGLILGTGTS+++VKIWDVKSQ NVAKFDGH G VTAISFSENGYFLATAA DGV+LWDL
Sbjct: 366 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVRLWDL 425

Query: 469 RKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIR 505
           RKL+NF++F   D+    NSV+FD SGSYL IA SDI+
Sbjct: 426 RKLRNFKSFLSADA----NSVEFDPSGSYLGIAASDIK 457

[Close]

BLAST of CcUC05G085400 vs. TAIR 10
Match: AT2G33340.3 (MOS4-associated complex 3B )

HSP 1 Score: 672.9 bits (1735), Expect = 2.7e-193
Identity = 334/458 (72.93%), Postives = 386/458 (84.28%), Query Frame = 0


Query: 49  SGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPR--Q 108
           SGE+P EPVVS  SGLLFE+RLIERHI DYGKCPVTGEPL+IDDIVPIKTG+I+KP+   
Sbjct: 6   SGEVPVEPVVSTKSGLLFERRLIERHISDYGKCPVTGEPLTIDDIVPIKTGEIIKPKTLH 65

Query: 109 AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 168
            ASIPG+LG FQNEWD L+LSNFALEQQLHTARQELSHALYQHD+ACRVIARLKKERDEA
Sbjct: 66  TASIPGLLGTFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDSACRVIARLKKERDEA 125

Query: 169 RSLLAQAERQMPLSATSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 228
           R LLA+ ER +P +  + ++NAA    NGKR   DEELGPD KK+ PGISA +I+ELTDC
Sbjct: 126 RQLLAEVERHIPAAPEAVTANAAL--SNGKRAAVDEELGPDAKKLCPGISAEIITELTDC 185

Query: 229 NAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLD 288
           NAALSQ+RK+RQIP TL  ++ LE +TQ+SSHPLHKT+KPGI S+DI H KDVIATGG+D
Sbjct: 186 NAALSQKRKKRQIPQTLASIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDVIATGGVD 245

Query: 289 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 348
             AVLF R SG+ILSTL+GHSKKVTSVKFVG  DL LT SADKTVR+W+   DGNY C +
Sbjct: 246 ATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGY 305

Query: 349 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFHP 408
            L DH+AEV+AVTVH TN +FV+ASLD TWCFY+L+SG CL QV++DS+   YT+AAFHP
Sbjct: 306 TLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHP 365

Query: 409 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 468
           DGLILGTGTS+++VKIWDVKSQ NVAKFDGH G VTAISFSENGYFLATAA DGV+LWDL
Sbjct: 366 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVRLWDL 425

Query: 469 RKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIR 505
           RKL+NF++F   D+    NSV+FD SGSYL IA SDI+
Sbjct: 426 RKLRNFKSFLSADA----NSVEFDPSGSYLGIAASDIK 457

The following BLAST results are available for this feature:

BLAST of CcUC05G085400 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK17345.1	5.1e-263	90.72	pre-mRNA-processing factor 19 [Cucumis melo var. makuwa]	[more]
KAA0049213.1	1.3e-258	86.21	pre-mRNA-processing factor 19 [Cucumis melo var. makuwa]	[more]
XP_038891633.1	8.5e-258	98.25	pre-mRNA-processing factor 19 [Benincasa hispida]	[more]
XP_008438467.1	4.7e-256	94.32	PREDICTED: pre-mRNA-processing factor 19 [Cucumis melo]	[more]
XP_004134043.1	5.2e-255	94.11	pre-mRNA-processing factor 19 [Cucumis sativus]	[more]

BLAST of CcUC05G085400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9AV81	6.2e-203	71.87	Pre-mRNA-processing factor 19 OS=Oryza sativa subsp. japonica OX=39947 GN=PRP19 ...	[more]
Q94BR4	7.6e-193	70.70	Pre-mRNA-processing factor 19 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=PRP19...	[more]
O22785	3.8e-192	72.93	Pre-mRNA-processing factor 19 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=PRP19...	[more]
Q9UMS4	6.8e-101	43.54	Pre-mRNA-processing factor 19 OS=Homo sapiens OX=9606 GN=PRPF19 PE=1 SV=1	[more]
Q08E38	2.0e-100	43.33	Pre-mRNA-processing factor 19 OS=Bos taurus OX=9913 GN=PRPF19 PE=2 SV=1	[more]

BLAST of CcUC05G085400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D0U3	2.5e-263	90.72	Pre-mRNA-processing factor 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7U025	6.3e-259	86.21	Pre-mRNA-processing factor 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3AWF5	2.3e-256	94.32	Pre-mRNA-processing factor 19 OS=Cucumis melo OX=3656 GN=LOC103483553 PE=3 SV=1	[more]
A0A0A0L6Z6	2.5e-255	94.11	Pre-mRNA-processing factor 19 OS=Cucumis sativus OX=3659 GN=Csa_3G134680 PE=3 SV...	[more]
A0A6J1FIG8	6.8e-253	96.72	Pre-mRNA-processing factor 19 OS=Cucurbita moschata OX=3662 GN=LOC111445620 PE=3...	[more]

BLAST of CcUC05G085400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04510.2	2.4e-194	70.90	MOS4-associated complex 3A	[more]
AT1G04510.1	5.4e-194	70.70	MOS4-associated complex 3A	[more]
AT2G33340.1	2.7e-193	72.93	MOS4-associated complex 3B	[more]
AT2G33340.2	2.7e-193	72.93	MOS4-associated complex 3B	[more]
AT2G33340.3	2.7e-193	72.93	MOS4-associated complex 3B	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 156..176
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 303..335 score: 11.919224
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 392..427 score: 8.702878
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 434..467 score: 8.65015
None	No IPR available	CDD	cd16656	RING-Ubox_PRP19	coord: 49..97 e-value: 4.79521E-26 score: 99.1918
None	No IPR available	CDD	cd00200	WD40	coord: 267..512 e-value: 1.99184E-43 score: 156.341
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 49..96
IPR003613	U box domain	SMART	SM00504	Ubox_2	coord: 49..109 e-value: 3.5E-16 score: 69.8
IPR003613	U box domain	PROSITE	PS51698	U_BOX	coord: 49..113 score: 12.704191
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 468..513 e-value: 65.0 score: 5.6 coord: 296..335 e-value: 7.4E-9 score: 45.4 coord: 383..424 e-value: 0.73 score: 17.9 coord: 341..380 e-value: 3.1E-5 score: 33.4 coord: 251..293 e-value: 26.0 score: 8.1 coord: 427..465 e-value: 2.5E-8 score: 43.7
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 429..465 e-value: 0.0013 score: 19.5 coord: 298..334 e-value: 1.3E-6 score: 29.0
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 392..433 score: 11.410742
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 303..335 score: 14.41838
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 434..474 score: 11.009724
IPR013915	Pre-mRNA-splicing factor 19	PFAM	PF08606	Prp19	coord: 107..172 e-value: 1.2E-29 score: 102.1
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 243..535 e-value: 1.1E-73 score: 249.7
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 46..103 e-value: 1.6E-20 score: 74.4
IPR038959	Pre-mRNA-processing factor 19	PANTHER	PTHR43995	PRE-MRNA-PROCESSING FACTOR 19	coord: 49..504
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 265..502

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G085400.1	CcUC05G085400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0070534	protein K63-linked ubiquitination
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0000974	Prp19 complex
cellular_component	GO:0071006	U2-type catalytic step 1 spliceosome
molecular_function	GO:0005515	protein binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0004842	ubiquitin-protein transferase activity