CcUC05G081880 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G081880
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Thioredoxin
Location	CicolChr05: 858734 .. 868171 (+)
RNA-Seq Expression	CcUC05G081880
Synteny	CcUC05G081880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTCGAAAGCAGAAAAATCCCATTACCAACCAACTTGACGAAGAAGAACAAAATCATAGAGCACCGTAATTAGGTAAAATGGCGGATAATCAATTGTTGCAGTGACCATCTCAATCCTGTAAAGCGTAAATCCTTTCTCTTCTTCACGCGCACTCTCCGGAGGTACTAGAATACTGATTTTTACTCTCCCAAGTTGCAGAAGGAAACATAGCCACAATTACAAACAACCCTCCTTCAACTTCTCGATCTTTTTCTCTCTCGACTTCCCTTTTCCCCATGCTGTTTAGCTAGTTCATCGTCCTATTGGGATTTTAGGGGGAGACCTTTTGTCTTTTCAACTTGAATTTTGCTGCTTTCGTCTCTAAATGGCCGATGTTTTTAGATTCTCGTCGCATTCTTTCTATTTCTCCTCCAGTTCTTTACCACCCTCCTTTTCCTCGTCTTACAATTCTCTTCATCCTTCTCTTCCACCCATTCAAAACCCAGATAAGAGGTCAAGTCCTCTGCCATGTTATACCACTAGCTGCGCAATGCCTCTTTCTTTCAGACCCAGAAAGAGGTTGGTATCTTTCAAGGTACATAACTTGTCTTGTGGTCGGATTTCTATTGTATCATTGTTAATTCTTTAGATTTTTGTTGGATATCGAATAAATTTGTGCAATTGTTTAGTAAGTAGTTTTATATATGAATTTAGTTATATTAGTACACGTACCCCCAAAAGTTGTGCGCTTTCGTGCTTGCCTGATGATGCCTGGAAGTATTTGTTTGTTGGGGTTGTTTAAATTTGATTTTCAATTTGAAGTTTCATGCGTCGAATTACTATACGGGCAGATGCTATGGAACCTAATGGAGAAGGCCCATAGAAAAAGGGTGGATTCTTTTTATGAGTTCTCCGAGAAAGGAAGTTTATTGCCATGACAATGGAGCCAGCTGCTTGTATGACTAATCCAACCGTTCAAGTTTTTGTGGTAGTTGCTGCTTGTACTTTTATCAGTTAAAAGAATTTGGCGACATTGCTTTATCACAATTCTTTTCCATGTGCATTCAATTCTCAGTTGACAGTTGTAGTCCGTTCTACCAAGCTGTTTTATGTTTCAGTGTAGCCTGATGCTGGTTAACTCTAAAAGAAGCCATGTTTCTATTTTATGGTTGGTTTAACCAAAAGGAGCTATGTATTTTTTTTCCACTCTGTTTGAAGTTCCTTCAGAACTGGCGATGGCTATTGGGAAAATTTTTGGTTATGAATGAGTTAACGAGGGGAGAAATTGCTTGTTATTTGGAGAATTGTTGATTCTCCTATTGAGTTAGAAAGCCTGGGGGCAGATTTGACGTTTACTTTATGGCTGGGAACCATAGTTAAATTGGATTTTTGTGATTGCTTCCTTTTTTTTTTTTTGGGAATGTCAACGGGACAACTTCTTATAATTTCACCTTCGCTTTCTGAGGGCAGGAGGATGTGTGATTTGGCCCTACTATCCTTTTATACATGATTATTTGTTTAAAAATATTTCTAGTCAACCGTTTTCTCAGTTGCTCATGTTAATTGTTCTCCAATGCAACAGGTACAGGCTGCTGTGGCTGAAAAAGACCAGCCAAAATGGTGGGAAAAGAATGCACCAAACATGATTGATATACATTCCACACAGGAATTTTTAACTGCATTAAGTGAAGCTGGTGATAGATTAGTAATTGTAGAATTTTATGGAACCTGGTGTGCTTCTTGCAGGGCATTATTTCCCCGGGTAACATTTTTCATCAATGCTTTATATTTATCGGATTGTATAGTTGACCTGTTGTTTGTGTTTTTCATTAGATAATCAGGACATGCTTTCAGCATTTAAAACTCAATATAGGACCAGCTTATTGAAGTAGGCATTAAATAAATTGGTGTCATCAGTGACAATGACTGCTGCATTTTGTTGGCTATCTAGATGAAAAGCTTTAGAATACACTTTGCAGTACTCAAGGTTTTGTACCTATCTATGTTAATGAGGTTGAAACTTGAAACCTCAGACGATTGCTCAATCCTTTAAAATATATCCAAGATAGAAGTATAGTATTTTGGAAAATTGAGTAGTTTGATTAAGGAAGATTGTTCTCTTTTTATTCTTTCCCTTGGTGGTTTTCTGCTGCGGCAGCATTTCTGTCATTATCTGTCACTGGAGTTATAATGAGAAAGCTCCTGAACACTTCTTCTTTGCACGGCTGTTTCTTGCAAATTCTGCTCTTATCAAATGATTGATATTCATTGAATTTGATATTTTTTGTCTATTATAAAGAAAATGCATCTTACAGCAAAAATTGAGCTTGCCCCTATCATTATTTTTACTTTCCCGTTTTATGTTCTGATGTTGTTATATATGTTGAAATGGAACTGTCAGCTCTGCAGAACAGCTGATGAACACCCTGAGATTTTATTCCTAAAAGTCAATTTTGATGAAAACAAGCCAATGTGCAAAAGTTTGAATGTCAAGGTCCTTCCTTATTTCCACTTTTATCGTGGTGCTGACGGGCAGTTGGAATCCTTCTCATGCTCACTCGCAAAGGTTAGCAGTCTCCTCCCCATCCCCACCTCCAATGTGTCAATTCATTCGATTTTATTGGTTAGCTTATAATGAGTAGAATGTGTTTTGAGATATAAATAACTTTTTGAGTCAATTCGCTCTATTTCATTGGTTAGCTTATATTGAGCAGAATATATTTTAAAATCTGAATAACTTTTCAATTTGTGGACACATGTGATAGAAGGATTGATGAGGATCTCTAGTATGGATAGAAAACTTCCCTTATCCTCATTTTTTGAATAACTATATTAAGTTGTTGACCTTATGGCAGGAAGTGATATATTTTCTTGGTATTTTCATCAAATTATCAATATAGGCAAACATTTTCTAAATTTTTACTCTAACCTTTCTCCTTCCCGCAGTTTCAGAAAATTAAAGATGCAATTGAGATGCACAACACAGCTCGTTGCAGCATTGGGCCGCCAAAGGGAGTAGGAGATCTTATACTGGAGCCGTCCTTAGCTCCCCAAGACAAGCAATAAACAGAAGCTTCATCACAGATTTTCTGCCAAATCCGCGTCGGTATCATTGTGCATTCCCCTGATATTAATAACCTCTTGTTTAAGAAAGATTCTGCAGTCAGTTATTCAATCTGTAAATTTGCATTCTTGTTTTGTAAAAGAATTCAGAAGTTGAGAATACCAATCATAAAATATTTTGCTGCCTATGCCTTCTTGTGATGTTTGTTGGATCAAGTTCTAAATAGATGCCATTGATTCATTTGGTTTGGTGGGCAGTAGCTTGCATATACTGAAAACTGATCCTGAAATTTGTCTGTTCTTACTTTTAAGTTGACGTTCTGCCGACATGGTAAAGCATTTATAATTTCATAGCTTCGGATCTCCACTCCACATCTGTGTTTCATTCTTAGAGAGCTATTATTTAGAAGCTAAACTATGAAAGTATAAATATGTTAGACCTTCCATTAAAAAGGGATATTCGAGGAGGGGGTAAAAGGGGGATTACGTCCTAGACAAGGGCCTAGCTTTGGTGGTCCTGGTTGTACGGTCTTCATGGTGGGGAATGTTGGTATTTAAACATCTTTTTGGGTTAGGGTTAGTTATCTTGAATTTTGTGTTTAAACTGTAGTTCATTGGGAGGCGAGAACAGCCCTCTTAATTGGCTGTAGCTTCTATTGCTCTTAGTTCGGTTTGTTATCTTGTAATCAGAATCAGACTCCATTCCCCTGTATTTTGTGATTATAAGCTTGAAATACAGAATTGTGAGGAGGTATCCTATCCCTACAGAATATCCTATCGTGAGCATGTCATAATGAAAATGAAACTCCTTTACTTTTGCGTGCCAAAGCAGCAGTAGCACTGTTTGTTCTGGCAACAGTCAATACTACTTTTTACATGATGAACATGCTCATTCAATCTCTAAACTTTGAAATGTTTTAATTACATTTCTACACTTCTAATTTTGGTTGTAACAATTTCAATTGTTTGCGTTATATCAGGTTAGACTAAATAGTAAAGATTTGATACAATCTAATAATAGACACAGAAAATAAGTCATGAAGATAAATTTGAGGGGGGAAATTCAATTGGAACAAATGGAATATACTTAAACCAAGTTTTCTTAAGCTTTCATTATTCAAATTCCCTGTGATTATGTCCCAAAAAGACAAACAACAACAATAATTATTAAAAAGAAAAATTTGAAGAACGCAATTCACAGATGAGGTTGCTCAGTACAAGTGGAAACATTTCTAATTTTGACGCAAATAGCTTATGTATAGAAACTTTGGAAGTTACCGTGAATTAAATAAGCACAAAATATAAAAGGAGAAACTTTGGAAGTTATATCAAATTGAAATTCTTAATTAATTGAACATCTTTTTAATAATGTTATGGACATCTTCAATTCTGTAGCTTTCCCTCATCAGTATTAAAATTATAAGCTCATGTTACTTGTGACGTCCACTACTAAAGGTCAATCTACAAGTACCAAAACTTCTGACTTTAGAATAATTTGATCAAAGTCATAATAACATTATGATTTATTCAGACCCAATGATGAATAAAATGTTCAAGTTTTAAAGCTTACAAAAACTTTCAATTAACCAAGCTGATGGATTTCTCACACATCTTTCTCTTCTTCTTCTTCCTCTTCATCTTCCCCACTTTATCCACAGCTCAAAGTTGCTCTATTTCTAACTGTATCAACAACGATTTCGACATCAGATTCCCCTTCCGAATTCCAGACCAGCAACCTGCAAGATGTGGCTATCCCGGTTTCAACTTAGCCTGCAACAAGGCGGGTGTGGCAACTATAAATCTATCTTCTTCTGAATATTTTTTGGTAAGAGGTATTGATTATGTCACTCAACAAATACAGCTCTATGATTCAGATGCTTGCCTTCCTAGAAGACTTCTCCAAGGCTTCAAACTCAATCTCTCAAATTCCCCATTTATACCACTTTCTAGTCAGAGTTTTACCTTTCTAAGCTGCCCACCTCAGTTTGCAATGTCGCGTTTTCCTGTCATTGGTTGTCTTAGCAATTCAACTGACTCGATTGTGGCTACTTCCTCGATGAGTTTTGCCAAGTCAATGTCAACCTCTTGCAAGATCATGACTAATTTATCTGTCCCAGTTTCAAACCCAGATGAGGTCAATCAATTTTTAACTAACCTCAATGGTGATCTCGTGCTAACTTGGTATAGACCTGCTTGCGGTATCTGTGAGACAGAAGGCAAGCTTTGTGGGTATAAAAGCAACAGTGGTCAGGGGATTGCCTGTTTCAATAAGTACATATCAGGTAAAAGTTCTGCCCTTTATAACTATTTGCTAAGTTAATGTTTACCTTGAAACTATATCTCATATAAAAGCTCAAAAACTCATCTCTTAAGATAGGTGGAATGCATTTCTTCAGCATCTCTTGTATAATCCTAGTTGTTTGAGGAAAAGCTCAAAGCAAAGACAAAATGAAATATTGAAAAAAGAAAAGAGAAAAAGAAACCCATTATTTTCTTAAAATCATAATAAACAAACCAATGTCCCAATAATAATGGCGGTATTAGCTATTACCCTAAACTGCAGGCTGCGGTACGAATCTTAGACTGGCTGTTGGTTGACCAAGACATAGATAATGTTTATATTACTGGGAAGTTGGGATTAAAGTAATACCTGAAAAATAATTTTAAAAATGGTTGACTTTATAGATGGTGAAGGAATGACAAAGACATTTGACATTTGTTCACTGCCCCCCTTCCCCCTCCCCACCCCTACCACACTAGAAGTTGTTAGAAATTACTTTCAAAAGTTTTTATCTTTCACAACTAGCACCCTTTTATGCAATTCGTTGAAATAGTTTTTAGCAGCCTATCTCATCTAAGATCGACCCCGAGATTCATATAAAAATTTGACTTCATTTCGATGCACATCCAAACTATTGATTGTTAGTTTTGATGTAAGTAAAATTTTTATTTGAGTCTCAAGGTTAATCTCAATTGGGAAGGACCGTTGAAAACTATTTCAATGAGTTCTAAGGGTGCTAGTTGTGAAAGATAAACAACATTTGAGAGTTAGACCATCTCCCCACATACACACAGGAAAAATGTCATTCATGATATATTTTTGCAAAAATATCAAAGTTCATGATACCCAATTAAATGATGTCACCTTAAATTTCAGAGGAAAACAATGGTCTCAGAGTATTGCGGATCATCTGTGTGGTGATTGTTCTACCGACTTTGATGTGTGTCTTTGGACTTGGCTGTTTCATCTGCTTCGCAAAGTGGGGCTATGACCTTGCGGACGGCAGAGGAAACCAAGTTCAGCATCAGCAGGTCAATCCAGCAGGGTCTGATTTAGAGGCACCGACCCGTTTGAGTGGTCTAGATGAATCCACCATTGAATCATATCAAAAGGTAATCCTTGGAGAAAGCCGGCGGCTGCCTGGCCCCAATGGCACGACCTGCCCCATATGCCTTGGAGAGTACTTAACCAAAGACACTGTCAGATGCATTCCTGAGTGCAAGCATTGCTTCCATGTTGATTGTATTGATCAATGGCTTCGAGTCAACAGCAGTTGCCCTGTTTGTCGAAACTCTCCCAATCCCTCCCCTTCCCATTTAACTTCAATCTCATGATCTTCCCAATTCTTCTCATCGACGTAAAAAACAATACAACAATGCAAAGCCAGTGTACAGAGATTCAAGCAATTTGACAACTAACAAGCTCACTTCACTTACTTCACTCAACCATTACAATTAGAGAAAACCCCCCACTTCTTTGTGTGGCAATAAAACCATGAAGGAATCACAAGACCTGCATGCCAGCAGATTTTCAGGAAATGGCACAAGAAATCGGATATAAAAGGCACTCAAATCGTAAACCCCACCTCAAGACATAAACACCCAGCAAGTGTTTGTATAAATTACCAAGTGAAAACATGTCAGGAATCTTCAATCGCCGGTCGACGATGGGGGGCGTAGCCTTCGTCGCCGTGTTGATTTGCTCCCTGATGGTCGGTCTGTCTCAGAATGAGGATGTGGAAGGTTGTGTACCGGTGGCGCAGGAGCTATCACCATGCTTGGGCTTCATTAAAGGCAGCGACAGCGCGTTTGGTGGTGAACATCCGTCGCCGTCGTGCTGCAGCGGCGTTAAAAAGTTGGTGGGCGATGCTAAAACGAAGAAAGATAAGGTCGCTCTGTGCGAATGCATCAAGAAGAGTTTGTCAATGATCGGACCTTATGATCCGAGTCGCATCCCTTTGATTCCAGAAGAATGCGGAATTCCCATCCAAATTCCTCCCATCGACAATTCCACTGACTGCTCAACGTAATTTTTTCTTTTACGAACTTTTCATTAATTTTTGCTGGAGTACTCTAAATGTTTAATCACTGTATTTTGAGGTTTGCATTTATTTGTTCGCAAAATTGTGGGTAGATCTCAATTTTATATCTAATAACTTCTTCAAATTTTAAATTTTATGAATATTGCGAACATGGTAGGTAGATCAATTTTCAACTTTTGCTGTAATAATTTTAAATTTTATGAATAATGAATATTGCGAACATGGTAGGTAGATCAATTTTCAACTTTTGCTGTAATAATTTTAAATTTTATGAATAATAGAACTTTCAATGGTGTGTTTAGTTAGTGAATTTTGAAATGTTGATAATTCAATACCCTGTTGGGTAACTAACTACAAAATTAAGTTTATTTCTTCTCCATTTATTACATTGATTTGCATTTACAATAATTGAATTTTTTTGCCAAATTCCAAAAATAAAAACGAGTTTTTAAAAGTTATTTTTTTAGTTTTCAAATTTTTGTTTGGTTTTTTAAACCATTGGTAAAAAGTAGATAACAAAGGAATAAATTTGAAAGTACAAATAGTATTTATAAGCTTAATTTTAAAAAATAAAAATAAAAAACAAGGCCTAAATTTATAGTTTTTAGAAGTTTCTGATAACAAATAGATGTAATATGTTACACATAACATTTATTTTTAAATTAATGAATATATCGGACATAAATTTGAATTTTGTATCTAATAGTTTGTTAAACTTCATTCTTGTGTTCTAGATTAGTGAGCTTCAAGAAAAAAAGTATCAATAGACCAAATAACCTATTAGACACATAAGTATTTGTTTAATAATTTTGTATCAAAAAGAAAAAAAAAAATTCAATAACTTATTAGATACAAAATCAAAAATTTATGGATTTATAAGATACTAAATTGAAAGTTATAATTTAACCTCAAAACTTATACTTAGCTCATTAATATTTTTAGTACAAAAATTTCTAGACAATAATTGAAAAAAGAAAAGAAAAATTCTATTTTGGTTACTGAAAGTTCTAACATATTTTGCTTTGGTCTGTAAATGCTTGAACATATTATTTTTGTCACAAACTTTAAAGTTAATGCTTGATAGACTAATGGGTCATTTATCTTTACAATATATGACTCTAAAAAGGGAGAGGAAAAACAGCTTTTATAAGCTCTCTAATAAATTAAATCAAGTCTTTTTCCTTTTTTCCAGGAATCAAAAGATCAATCTAATTATTAAAAATAAAAAAAAATAAAAAATTCATATCACATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGGATTGAACTTTATTTAACAAAGCACTGGCTGTTTGTGTCTGTTGTCATTGCAGGGTTGAGGGCTTTCAATTTGGAACAGCTTTCTTATTTGATATTGGGGATAACCATCATCATTGAGCCCAATCAACATGAACTTAGCAAATCCCATATGATGTTTCTGGGTTTCTTCATGTTTCAAAATAAGATTGACAATGTCATTACATGCTCAAAATGCTATTATATCTATTATCAGTAATACTTCTAGCTATATTATGTTCACCAATTAATCCACCCTTTTCTTTTTTTAATATGCTTTTCATTCTCTATGGTTTTCA

mRNA sequence

AACTCGAAAGCAGAAAAATCCCATTACCAACCAACTTGACGAAGAAGAACAAAATCATAGAGCACCGTAATTAGGTAAAATGGCGGATAATCAATTGTTGCAGTGACCATCTCAATCCTGTAAAGCGTAAATCCTTTCTCTTCTTCACGCGCACTCTCCGGAGGTACTAGAATACTGATTTTTACTCTCCCAAGTTGCAGAAGGAAACATAGCCACAATTACAAACAACCCTCCTTCAACTTCTCGATCTTTTTCTCTCTCGACTTCCCTTTTCCCCATGCTGTTTAGCTAGTTCATCGTCCTATTGGGATTTTAGGGGGAGACCTTTTGTCTTTTCAACTTGAATTTTGCTGCTTTCGTCTCTAAATGGCCGATGTTTTTAGATTCTCGTCGCATTCTTTCTATTTCTCCTCCAGTTCTTTACCACCCTCCTTTTCCTCGTCTTACAATTCTCTTCATCCTTCTCTTCCACCCATTCAAAACCCAGATAAGAGGTCAAGTCCTCTGCCATGTTATACCACTAGCTGCGCAATGCCTCTTTCTTTCAGACCCAGAAAGAGGTTGGTATCTTTCAAGGTACAGGCTGCTGTGGCTGAAAAAGACCAGCCAAAATGGTGGGAAAAGAATGCACCAAACATGATTGATATACATTCCACACAGGAATTTTTAACTGCATTAAGTGAAGCTGGTGATAGATTAGTAATTGTAGAATTTTATGGAACCTGGTGTGCTTCTTGCAGGGCATTATTTCCCCGGCTCTGCAGAACAGCTGATGAACACCCTGAGATTTTATTCCTAAAAGTCAATTTTGATGAAAACAAGCCAATGTGCAAAAGTTTGAATGTCAAGGTCCTTCCTTATTTCCACTTTTATCGTGGTGCTGACGGGCAGTTGGAATCCTTCTCATGCTCACTCGCAAAGTTTCAGAAAATTAAAGATGCAATTGAGATGCACAACACAGCTCGTTGCAGCATTGGGCCGCCAAAGGGAGTAGGAGATCTTATACTGGAGCCGTCCTTAGCTCCCCAAGACAAGCAATAAACAGAAGCTTCATCACAGATTTTCTGCCAAATCCGCGTCGCTCAAAGTTGCTCTATTTCTAACTGTATCAACAACGATTTCGACATCAGATTCCCCTTCCGAATTCCAGACCAGCAACCTGCAAGATGTGGCTATCCCGGTTTCAACTTAGCCTGCAACAAGGCGGGTGTGGCAACTATAAATCTATCTTCTTCTGAATATTTTTTGGTAAGAGGTATTGATTATGTCACTCAACAAATACAGCTCTATGATTCAGATGCTTGCCTTCCTAGAAGACTTCTCCAAGGCTTCAAACTCAATCTCTCAAATTCCCCATTTATACCACTTTCTAGTCAGAGTTTTACCTTTCTAAGCTGCCCACCTCAGTTTGCAATGTCGCGTTTTCCTGTCATTGGTTGTCTTAGCAATTCAACTGACTCGATTGTGGCTACTTCCTCGATGAGTTTTGCCAAGTCAATGTCAACCTCTTGCAAGATCATGACTAATTTATCTGTCCCAGTTTCAAACCCAGATGAGGTCAATCAATTTTTAACTAACCTCAATGGTGATCTCGTGCTAACTTGGTATAGACCTGCTTGCGGTATCTGTGAGACAGAAGGCAAGCTTTGTGGGTATAAAAGCAACAGTGGTCAGGGGATTGCCTGTTTCAATAAGTACATATCAGAGGAAAACAATGGTCTCAGAGTATTGCGGATCATCTGTGTGGTGATTGTTCTACCGACTTTGATGTGTGTCTTTGGACTTGGCTGTTTCATCTGCTTCGCAAAGTGGGGCTATGACCTTGCGGACGGCAGAGGAAACCAAGTTCAGCATCAGCAGGTCAATCCAGCAGGGTCTGATTTAGAGGCACCGACCCGTTTGAGTGGTCTAGATGAATCCACCATTGAATCATATCAAAAGGTAATCCTTGGAGAAAGCCGGCGGCTGCCTGGCCCCAATGGCACGACCTGCCCCATATGCCTTGGAGAGTACTTAACCAAAGACACTGTCAGATGCATTCCTGAGTGCAAGCATTGCTTCCATGTTGATTGTATTGATCAATGGCTTCGAGTCAACAGCAGTTGCCCTGTTTGTCGAAACTCTCCCAATCCCTCCCCTTCCCATTTAACTTCAATCTCATGATCTTCCCAATTCTTCTCATCGACGTAAAAAACAATACAACAATGCAAAGCCAGTGTACAGAGATTCAAGCAATTTGACAACTAACAAGCTCACTTCACTTACTTCACTCAACCATTACAATTAGAGAAAACCCCCCACTTCTTTGTGTGGCAATAAAACCATGAAGGAATCACAAGACCTGCATGCCAGCAGATTTTCAGGAAATGGCACAAGAAATCGGATATAAAAGGCACTCAAATCGTAAACCCCACCTCAAGACATAAACACCCAGCAAGTGTTTGTATAAATTACCAAGTGAAAACATGTCAGGAATCTTCAATCGCCGGTCGACGATGGGGGGCGTAGCCTTCGTCGCCGTGTTGATTTGCTCCCTGATGGTCGGTCTGTCTCAGAATGAGGATGTGGAAGGTTGTGTACCGGTGGCGCAGGAGCTATCACCATGCTTGGGCTTCATTAAAGGCAGCGACAGCGCGTTTGGTGGTGAACATCCGTCGCCGTCGTGCTGCAGCGGCGTTAAAAAGTTGGTGGGCGATGCTAAAACGAAGAAAGATAAGGTCGCTCTGTGCGAATGCATCAAGAAGAGTTTGTCAATGATCGGACCTTATGATCCGAGTCGCATCCCTTTGATTCCAGAAGAATGCGGAATTCCCATCCAAATTCCTCCCATCGACAATTCCACTGACTGCTCAACGGTTGAGGGCTTTCAATTTGGAACAGCTTTCTTATTTGATATTGGGGATAACCATCATCATTGAGCCCAATCAACATGAACTTAGCAAATCCCATATGATGTTTCTGGGTTTCTTCATGTTTCAAAATAAGATTGACAATGTCATTACATGCTCAAAATGCTATTATATCTATTATCAGTAATACTTCTAGCTATATTATGTTCACCAATTAATCCACCCTTTTCTTTTTTTAATATGCTTTTCATTCTCTATGGTTTTCA

Coding sequence (CDS)

ATGGCCGATGTTTTTAGATTCTCGTCGCATTCTTTCTATTTCTCCTCCAGTTCTTTACCACCCTCCTTTTCCTCGTCTTACAATTCTCTTCATCCTTCTCTTCCACCCATTCAAAACCCAGATAAGAGGTCAAGTCCTCTGCCATGTTATACCACTAGCTGCGCAATGCCTCTTTCTTTCAGACCCAGAAAGAGGTTGGTATCTTTCAAGGTACAGGCTGCTGTGGCTGAAAAAGACCAGCCAAAATGGTGGGAAAAGAATGCACCAAACATGATTGATATACATTCCACACAGGAATTTTTAACTGCATTAAGTGAAGCTGGTGATAGATTAGTAATTGTAGAATTTTATGGAACCTGGTGTGCTTCTTGCAGGGCATTATTTCCCCGGCTCTGCAGAACAGCTGATGAACACCCTGAGATTTTATTCCTAAAAGTCAATTTTGATGAAAACAAGCCAATGTGCAAAAGTTTGAATGTCAAGGTCCTTCCTTATTTCCACTTTTATCGTGGTGCTGACGGGCAGTTGGAATCCTTCTCATGCTCACTCGCAAAGTTTCAGAAAATTAAAGATGCAATTGAGATGCACAACACAGCTCGTTGCAGCATTGGGCCGCCAAAGGGAGTAGGAGATCTTATACTGGAGCCGTCCTTAGCTCCCCAAGACAAGCAATAA

Protein sequence

MADVFRFSSHSFYFSSSSLPPSFSSSYNSLHPSLPPIQNPDKRSSPLPCYTTSCAMPLSFRPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLILEPSLAPQDKQ

Homology

[Close]

BLAST of CcUC05G081880 vs. NCBI nr
Match: XP_008437900.1 (PREDICTED: thioredoxin-like 2, chloroplastic [Cucumis melo])

HSP 1 Score: 447.2 bits (1149), Expect = 8.3e-122
Identity = 215/224 (95.98%), Postives = 222/224 (99.11%), Query Frame = 0


Query: 1   MADVFRFSSHSFYFSSSSLPPSFSSSYNSLHPSLPPIQNPDKRSSPLPCYTTSCAMPLSF 60
           MADVFRFSSHSFYFSS+SLPPSF+SSY+SLHPSLP IQNP+KRSSP+PCY+TS AMPLSF
Sbjct: 1   MADVFRFSSHSFYFSSTSLPPSFASSYSSLHPSLPSIQNPEKRSSPMPCYSTSYAMPLSF 60

Query: 61  RPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW 120
           RPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW
Sbjct: 61  RPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW 120

Query: 121 CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS 180
           CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS
Sbjct: 121 CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS 180

Query: 181 CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLILEPSLAPQDKQ 225
           CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLILEPSLAP+DKQ
Sbjct: 181 CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLILEPSLAPKDKQ 224

[Close]

BLAST of CcUC05G081880 vs. NCBI nr
Match: XP_038877589.1 (thioredoxin-like 2, chloroplastic [Benincasa hispida])

HSP 1 Score: 445.7 bits (1145), Expect = 2.4e-121
Identity = 214/224 (95.54%), Postives = 220/224 (98.21%), Query Frame = 0


Query: 1   MADVFRFSSHSFYFSSSSLPPSFSSSYNSLHPSLPPIQNPDKRSSPLPCYTTSCAMPLSF 60
           MAD FRFSSHSFYFSSSSLPPSF+SSYNSLHPSLPPIQNP+K+ SPLPCY+T+  MPLSF
Sbjct: 1   MADGFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIQNPEKKPSPLPCYSTTYVMPLSF 60

Query: 61  RPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW 120
           RPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW
Sbjct: 61  RPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW 120

Query: 121 CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS 180
           CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS
Sbjct: 121 CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS 180

Query: 181 CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLILEPSLAPQDKQ 225
           CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLILEPSLAP+DKQ
Sbjct: 181 CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLILEPSLAPKDKQ 224

[Close]

BLAST of CcUC05G081880 vs. NCBI nr
Match: XP_004133814.1 (thioredoxin-like 2, chloroplastic [Cucumis sativus] >KGN56427.1 hypothetical protein Csa_010811 [Cucumis sativus])

HSP 1 Score: 445.3 bits (1144), Expect = 3.2e-121
Identity = 214/224 (95.54%), Postives = 221/224 (98.66%), Query Frame = 0


Query: 1   MADVFRFSSHSFYFSSSSLPPSFSSSYNSLHPSLPPIQNPDKRSSPLPCYTTSCAMPLSF 60
           MADVFRFSSHSFYFSS+SLPPSF+SSY+SLHPSLP IQNP+KRSSP+PCY+TS  MPLSF
Sbjct: 1   MADVFRFSSHSFYFSSTSLPPSFASSYSSLHPSLPSIQNPEKRSSPMPCYSTSHVMPLSF 60

Query: 61  RPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW 120
           RPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW
Sbjct: 61  RPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW 120

Query: 121 CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS 180
           CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS
Sbjct: 121 CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS 180

Query: 181 CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLILEPSLAPQDKQ 225
           CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLILEPSLAP+DKQ
Sbjct: 181 CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLILEPSLAPKDKQ 224

[Close]

BLAST of CcUC05G081880 vs. NCBI nr
Match: KAA0048892.1 (thioredoxin-like 2 [Cucumis melo var. makuwa] >TYK20842.1 thioredoxin-like 2 [Cucumis melo var. makuwa])

HSP 1 Score: 423.3 bits (1087), Expect = 1.3e-114
Identity = 210/254 (82.68%), Postives = 219/254 (86.22%), Query Frame = 0


Query: 1   MADVFRFSSHSFYFSSSSLPPSFSSSYNSLHPSLPPIQNPDKRSSPLPCYTTSCAMPLSF 60
           MADVFRFSSHSFYFSS+SLPPSF+SSY+SLHPSLP IQNP+KRSSP+PCY+TS AMPLSF
Sbjct: 1   MADVFRFSSHSFYFSSTSLPPSFASSYSSLHPSLPSIQNPEKRSSPMPCYSTSYAMPLSF 60

Query: 61  RPRKRLV------------------------------SFKVQAAVAEKDQPKWWEKNAPN 120
           RPRKR                                 ++VQAAVAEKDQPKWWEKNAPN
Sbjct: 61  RPRKRFYGTLVRSMDKDGFFFMRYPGNEVLRLTVLPWQWRVQAAVAEKDQPKWWEKNAPN 120

Query: 121 MIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDE 180
           MIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDE
Sbjct: 121 MIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDE 180

Query: 181 NKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIEMHNTARCSIGPPKGVG 225
           NKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIEMHNTARCSIGPPKGVG
Sbjct: 181 NKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIEMHNTARCSIGPPKGVG 240

[Close]

BLAST of CcUC05G081880 vs. NCBI nr
Match: XP_022924452.1 (thioredoxin-like 2, chloroplastic [Cucurbita moschata] >XP_023526881.1 thioredoxin-like 2, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6582671.1 Thioredoxin-like 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 412.5 bits (1059), Expect = 2.3e-111
Identity = 199/214 (92.99%), Postives = 206/214 (96.26%), Query Frame = 0


Query: 1   MADVFRFSSHSFYFSSSSLPPSFSSSYNSLHPSLPPIQNPDKRSSPLPCYTTSCAMPLSF 60
           MADV RFSS+SFYFSS+SLPPSF+SSYNSLHP L PIQNP+KRS+PL  Y+ +C MPLSF
Sbjct: 1   MADVSRFSSNSFYFSSTSLPPSFASSYNSLHPCLQPIQNPEKRSTPLASYSATCLMPLSF 60

Query: 61  RPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW 120
            PRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW
Sbjct: 61  TPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW 120

Query: 121 CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS 180
           CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS
Sbjct: 121 CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS 180

Query: 181 CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLIL 215
           CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLIL
Sbjct: 181 CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLIL 214

[Close]

BLAST of CcUC05G081880 vs. ExPASy Swiss-Prot
Match: Q5TKD8 (Thioredoxin-like 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0200100 PE=2 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.4e-71
Identity = 138/198 (69.70%), Postives = 152/198 (76.77%), Query Frame = 0


Query: 33  SLPPIQNPDKRSSPLPCYTTSCAMPLSFR------PRKRLVSFKVQAAVAEK-DQPKWWE 92
           S P   +    +SP P    S A P   R      PR R    K  AAV++K +QPKWWE
Sbjct: 17  STPACSSASSSTSPSPHCLLSRANPRPPRLAAPSPPRHR--RLKAHAAVSDKSEQPKWWE 76

Query: 93  KNA-PNMIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFL 152
           KNA PNMIDIHSTQEFL AL +AGDRLVIVEFYGTWC SCRALFPRLCRTA E+P+ILFL
Sbjct: 77  KNAGPNMIDIHSTQEFLDALRDAGDRLVIVEFYGTWCGSCRALFPRLCRTAVENPDILFL 136

Query: 153 KVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIEMHNTARCSIG 212
           KVNFDENKPMCK LNVKVLPYFHFYRGADGQLE+FSCSLAKFQK+KDAI +HNTARCSIG
Sbjct: 137 KVNFDENKPMCKRLNVKVLPYFHFYRGADGQLEAFSCSLAKFQKLKDAIAVHNTARCSIG 196

Query: 213 PPKGVGDLILEPSLAPQD 223
           PP GVGD++  P   P +
Sbjct: 197 PPVGVGDVLDSPEEKPAE 212

[Close]

BLAST of CcUC05G081880 vs. ExPASy Swiss-Prot
Match: Q8LEK4 (Thioredoxin-like 2-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g26160 PE=1 SV=2)

HSP 1 Score: 233.0 bits (593), Expect = 3.2e-60
Identity = 121/198 (61.11%), Postives = 139/198 (70.20%), Query Frame = 0


Query: 6   RFSSHSFYFSSSSLPPSFSSSYNSLHPSLPPIQNPDKRSSPLPCYTTSCAMPLSFRPRKR 65
           R  S S Y SS+S P S       L  S          SS     T+S    L F  R +
Sbjct: 9   RSLSFSLYASSNSTPISTPIEARQLLSSCNRFYGLSSSSSSSSLTTSSLIGNLVFSSRNQ 68

Query: 66  LVSFKVQAAVAEKDQPKWWEKNA-PNMIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASC 125
            +S KVQA  AE +QPKWWE+ A PNMIDI S ++FL AL +AGDRLVIV+FYGTWC SC
Sbjct: 69  SLSVKVQALAAETEQPKWWERKAGPNMIDITSAEQFLNALKDAGDRLVIVDFYGTWCGSC 128

Query: 126 RALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLA 185
           RA+FP+LC+TA EHP ILFLKVNFDENK +CKSLNVKVLPYFHFYRGADGQ+ESFSCSLA
Sbjct: 129 RAMFPKLCKTAKEHPNILFLKVNFDENKSLCKSLNVKVLPYFHFYRGADGQVESFSCSLA 188

Query: 186 KFQKIKDAIEMHNTARCS 203
           KFQK+++AIE HN    S
Sbjct: 189 KFQKLREAIERHNVGSIS 206

[Close]

BLAST of CcUC05G081880 vs. ExPASy Swiss-Prot
Match: Q8LCT3 (Thioredoxin-like 2-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g29670 PE=2 SV=2)

HSP 1 Score: 231.5 bits (589), Expect = 9.4e-60
Identity = 126/203 (62.07%), Postives = 148/203 (72.91%), Query Frame = 0


Query: 1   MADVFRFSSHSFY-FSSSSLPPSFSSSYNSLHPSLPPIQ--NPDKR-----SSPL----- 60
           MA V R ++ S      SS   SF+++ N L P LPP    N DKR     SSP      
Sbjct: 1   MAGVVRLTTTSVQAIRVSSSFSSFATALNPLQPCLPPNSNLNSDKRLRLLSSSPSCSSSH 60

Query: 61  --PCYTTSCAMPLSFRPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALS 120
             P       +PL  RP+ ++V  KV   VAE + PKWWE+NAPNM+DIHST+EFL+ALS
Sbjct: 61  YHPSSGLGSHLPLR-RPKSQVVRVKVDENVAETEPPKWWERNAPNMVDIHSTEEFLSALS 120

Query: 121 EAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPY 180
            AG+RLVIVEFYGTWCASCRALFP+LC+TA EHP+I+FLKVNFDENKPMCKSLNV+VLP+
Sbjct: 121 GAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLKVNFDENKPMCKSLNVRVLPF 180

Query: 181 FHFYRGADGQLESFSCSLAKFQK 189
           FHFYRGADGQLESFSCSLAK +K
Sbjct: 181 FHFYRGADGQLESFSCSLAKVKK 202

[Close]

BLAST of CcUC05G081880 vs. ExPASy Swiss-Prot
Match: Q10M18 (Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0326500 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 4.1e-39
Identity = 77/169 (45.56%), Postives = 111/169 (65.68%), Query Frame = 0


Query: 57  PLSFRPRKRLVSFKVQAAVAEKDQPKWWEKN-APNMIDIHSTQEFLTALSEAGDRLVIVE 116
           P   RP  R +   VQ  +A     KWWEK   PNM ++ S Q+ + +L+ AGD LVIV+
Sbjct: 61  PRRSRPVPRNLVAPVQMNLAFAKATKWWEKGLQPNMREVESAQDLVDSLTNAGDNLVIVD 120

Query: 117 FYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQ 176
           F+   C  CRAL P++C+ A+++P++LFL+VN++E+K MC SL+V VLP+F FYRGA G+
Sbjct: 121 FFSPGCGGCRALHPKICQIAEQNPDVLFLQVNYEEHKSMCYSLHVHVLPFFRFYRGAQGR 180

Query: 177 LESFSCSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLILEPSLAPQDKQ 225
           L SFSC+ A  +K +DA+  H   RCS+GP +G+ +  L    A +D Q
Sbjct: 181 LCSFSCTNATIKKFRDALAKHKPDRCSLGPTRGLEESELLALAANKDLQ 229

[Close]

BLAST of CcUC05G081880 vs. ExPASy Swiss-Prot
Match: O22779 (Thioredoxin-like 1-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g33270 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.6e-36
Identity = 67/162 (41.36%), Postives = 110/162 (67.90%), Query Frame = 0


Query: 63  RKRLVSF-KVQAAVAEKDQPKWWEKN-APNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW 122
           +K++ +F + Q ++      KWWEK   PNM  + S Q+ + +L  AGD+LV+V+F+   
Sbjct: 65  KKKIPAFVRCQTSLGIGRNQKWWEKELKPNMKSVTSPQDLVVSLRNAGDKLVVVDFFSPS 124

Query: 123 CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS 182
           C  C+AL P++C+ A+++PE+ FL+VN++E++ +C+SLN+ VLP+F FYRG+ G++ SFS
Sbjct: 125 CGGCKALHPKICKIAEKNPEVEFLQVNYEEHRSLCQSLNIHVLPFFRFYRGSSGRVCSFS 184

Query: 183 CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLILEPSLAPQD 223
           C+ A  +K K+A+E H   +CSIG  KG+ +  L    A +D
Sbjct: 185 CTNATIRKFKEALEKHGREQCSIGETKGLEEKELVAMAANKD 226

[Close]

BLAST of CcUC05G081880 vs. ExPASy TrEMBL
Match: A0A1S3AV76 (thioredoxin-like 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483190 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 4.0e-122
Identity = 215/224 (95.98%), Postives = 222/224 (99.11%), Query Frame = 0


Query: 1   MADVFRFSSHSFYFSSSSLPPSFSSSYNSLHPSLPPIQNPDKRSSPLPCYTTSCAMPLSF 60
           MADVFRFSSHSFYFSS+SLPPSF+SSY+SLHPSLP IQNP+KRSSP+PCY+TS AMPLSF
Sbjct: 1   MADVFRFSSHSFYFSSTSLPPSFASSYSSLHPSLPSIQNPEKRSSPMPCYSTSYAMPLSF 60

Query: 61  RPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW 120
           RPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW
Sbjct: 61  RPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW 120

Query: 121 CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS 180
           CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS
Sbjct: 121 CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS 180

Query: 181 CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLILEPSLAPQDKQ 225
           CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLILEPSLAP+DKQ
Sbjct: 181 CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLILEPSLAPKDKQ 224

[Close]

BLAST of CcUC05G081880 vs. ExPASy TrEMBL
Match: A0A0A0L760 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G119600 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.5e-121
Identity = 214/224 (95.54%), Postives = 221/224 (98.66%), Query Frame = 0


Query: 1   MADVFRFSSHSFYFSSSSLPPSFSSSYNSLHPSLPPIQNPDKRSSPLPCYTTSCAMPLSF 60
           MADVFRFSSHSFYFSS+SLPPSF+SSY+SLHPSLP IQNP+KRSSP+PCY+TS  MPLSF
Sbjct: 1   MADVFRFSSHSFYFSSTSLPPSFASSYSSLHPSLPSIQNPEKRSSPMPCYSTSHVMPLSF 60

Query: 61  RPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW 120
           RPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW
Sbjct: 61  RPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW 120

Query: 121 CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS 180
           CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS
Sbjct: 121 CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS 180

Query: 181 CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLILEPSLAPQDKQ 225
           CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLILEPSLAP+DKQ
Sbjct: 181 CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLILEPSLAPKDKQ 224

[Close]

BLAST of CcUC05G081880 vs. ExPASy TrEMBL
Match: A0A5D3DB74 (Thioredoxin-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G001050 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 6.2e-115
Identity = 210/254 (82.68%), Postives = 219/254 (86.22%), Query Frame = 0


Query: 1   MADVFRFSSHSFYFSSSSLPPSFSSSYNSLHPSLPPIQNPDKRSSPLPCYTTSCAMPLSF 60
           MADVFRFSSHSFYFSS+SLPPSF+SSY+SLHPSLP IQNP+KRSSP+PCY+TS AMPLSF
Sbjct: 1   MADVFRFSSHSFYFSSTSLPPSFASSYSSLHPSLPSIQNPEKRSSPMPCYSTSYAMPLSF 60

Query: 61  RPRKRLV------------------------------SFKVQAAVAEKDQPKWWEKNAPN 120
           RPRKR                                 ++VQAAVAEKDQPKWWEKNAPN
Sbjct: 61  RPRKRFYGTLVRSMDKDGFFFMRYPGNEVLRLTVLPWQWRVQAAVAEKDQPKWWEKNAPN 120

Query: 121 MIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDE 180
           MIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDE
Sbjct: 121 MIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDE 180

Query: 181 NKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIEMHNTARCSIGPPKGVG 225
           NKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIEMHNTARCSIGPPKGVG
Sbjct: 181 NKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIEMHNTARCSIGPPKGVG 240

[Close]

BLAST of CcUC05G081880 vs. ExPASy TrEMBL
Match: A0A6J1E8Z8 (thioredoxin-like 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111431951 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.1e-111
Identity = 199/214 (92.99%), Postives = 206/214 (96.26%), Query Frame = 0


Query: 1   MADVFRFSSHSFYFSSSSLPPSFSSSYNSLHPSLPPIQNPDKRSSPLPCYTTSCAMPLSF 60
           MADV RFSS+SFYFSS+SLPPSF+SSYNSLHP L PIQNP+KRS+PL  Y+ +C MPLSF
Sbjct: 1   MADVSRFSSNSFYFSSTSLPPSFASSYNSLHPCLQPIQNPEKRSTPLASYSATCLMPLSF 60

Query: 61  RPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW 120
            PRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW
Sbjct: 61  TPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW 120

Query: 121 CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS 180
           CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS
Sbjct: 121 CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS 180

Query: 181 CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLIL 215
           CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLIL
Sbjct: 181 CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLIL 214

[Close]

BLAST of CcUC05G081880 vs. ExPASy TrEMBL
Match: A0A6J1IY90 (thioredoxin-like 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111479561 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 3.2e-111
Identity = 198/214 (92.52%), Postives = 206/214 (96.26%), Query Frame = 0


Query: 1   MADVFRFSSHSFYFSSSSLPPSFSSSYNSLHPSLPPIQNPDKRSSPLPCYTTSCAMPLSF 60
           MADV RFSS+SFYFSS+SLPPSF+SSYNSLHP L  IQNP+KRS+PL  Y+ +C MPLSF
Sbjct: 1   MADVSRFSSNSFYFSSTSLPPSFASSYNSLHPCLQSIQNPEKRSTPLASYSATCVMPLSF 60

Query: 61  RPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW 120
           RPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW
Sbjct: 61  RPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW 120

Query: 121 CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS 180
           CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS
Sbjct: 121 CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS 180

Query: 181 CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLIL 215
           CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDL+L
Sbjct: 181 CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLML 214

[Close]

BLAST of CcUC05G081880 vs. TAIR 10
Match: AT4G29670.1 (atypical CYS HIS rich thioredoxin 2 )

HSP 1 Score: 267.7 bits (683), Expect = 8.4e-72
Identity = 142/222 (63.96%), Postives = 166/222 (74.77%), Query Frame = 0


Query: 1   MADVFRFSSHSFY-FSSSSLPPSFSSSYNSLHPSLPPIQ--NPDKR-----SSPL----- 60
           MA V R ++ S      SS   SF+++ N L P LPP    N DKR     SSP      
Sbjct: 1   MAGVVRLTTTSVQAIRVSSSFSSFATALNPLQPCLPPNSNLNSDKRLRLLSSSPSCSSSH 60

Query: 61  --PCYTTSCAMPLSFRPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALS 120
             P       +PL  RP+ ++V  KV   VAE + PKWWE+NAPNM+DIHST+EFL+ALS
Sbjct: 61  YHPSSGLGSHLPLR-RPKSQVVRVKVDENVAETEPPKWWERNAPNMVDIHSTEEFLSALS 120

Query: 121 EAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPY 180
            AG+RLVIVEFYGTWCASCRALFP+LC+TA EHP+I+FLKVNFDENKPMCKSLNV+VLP+
Sbjct: 121 GAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLKVNFDENKPMCKSLNVRVLPF 180

Query: 181 FHFYRGADGQLESFSCSLAKFQKIKDAIEMHNTARCSIGPPK 208
           FHFYRGADGQLESFSCSLAKFQKIKDAI++HNT RCS+GP K
Sbjct: 181 FHFYRGADGQLESFSCSLAKFQKIKDAIQLHNTDRCSLGPAK 221

[Close]

BLAST of CcUC05G081880 vs. TAIR 10
Match: AT4G26160.1 (atypical CYS HIS rich thioredoxin 1 )

HSP 1 Score: 233.0 bits (593), Expect = 2.3e-61
Identity = 121/198 (61.11%), Postives = 139/198 (70.20%), Query Frame = 0


Query: 6   RFSSHSFYFSSSSLPPSFSSSYNSLHPSLPPIQNPDKRSSPLPCYTTSCAMPLSFRPRKR 65
           R  S S Y SS+S P S       L  S          SS     T+S    L F  R +
Sbjct: 9   RSLSFSLYASSNSTPISTPIEARQLLSSCNRFYGLSSSSSSSSLTTSSLIGNLVFSSRNQ 68

Query: 66  LVSFKVQAAVAEKDQPKWWEKNA-PNMIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASC 125
            +S KVQA  AE +QPKWWE+ A PNMIDI S ++FL AL +AGDRLVIV+FYGTWC SC
Sbjct: 69  SLSVKVQALAAETEQPKWWERKAGPNMIDITSAEQFLNALKDAGDRLVIVDFYGTWCGSC 128

Query: 126 RALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLA 185
           RA+FP+LC+TA EHP ILFLKVNFDENK +CKSLNVKVLPYFHFYRGADGQ+ESFSCSLA
Sbjct: 129 RAMFPKLCKTAKEHPNILFLKVNFDENKSLCKSLNVKVLPYFHFYRGADGQVESFSCSLA 188

Query: 186 KFQKIKDAIEMHNTARCS 203
           KFQK+++AIE HN    S
Sbjct: 189 KFQKLREAIERHNVGSIS 206

[Close]

BLAST of CcUC05G081880 vs. TAIR 10
Match: AT4G29670.2 (atypical CYS HIS rich thioredoxin 2 )

HSP 1 Score: 231.5 bits (589), Expect = 6.7e-61
Identity = 126/203 (62.07%), Postives = 148/203 (72.91%), Query Frame = 0


Query: 1   MADVFRFSSHSFY-FSSSSLPPSFSSSYNSLHPSLPPIQ--NPDKR-----SSPL----- 60
           MA V R ++ S      SS   SF+++ N L P LPP    N DKR     SSP      
Sbjct: 1   MAGVVRLTTTSVQAIRVSSSFSSFATALNPLQPCLPPNSNLNSDKRLRLLSSSPSCSSSH 60

Query: 61  --PCYTTSCAMPLSFRPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALS 120
             P       +PL  RP+ ++V  KV   VAE + PKWWE+NAPNM+DIHST+EFL+ALS
Sbjct: 61  YHPSSGLGSHLPLR-RPKSQVVRVKVDENVAETEPPKWWERNAPNMVDIHSTEEFLSALS 120

Query: 121 EAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPY 180
            AG+RLVIVEFYGTWCASCRALFP+LC+TA EHP+I+FLKVNFDENKPMCKSLNV+VLP+
Sbjct: 121 GAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLKVNFDENKPMCKSLNVRVLPF 180

Query: 181 FHFYRGADGQLESFSCSLAKFQK 189
           FHFYRGADGQLESFSCSLAK +K
Sbjct: 181 FHFYRGADGQLESFSCSLAKVKK 202

[Close]

BLAST of CcUC05G081880 vs. TAIR 10
Match: AT2G33270.1 (atypical CYS HIS rich thioredoxin 3 )

HSP 1 Score: 152.5 bits (384), Expect = 3.9e-37
Identity = 67/162 (41.36%), Postives = 110/162 (67.90%), Query Frame = 0


Query: 63  RKRLVSF-KVQAAVAEKDQPKWWEKN-APNMIDIHSTQEFLTALSEAGDRLVIVEFYGTW 122
           +K++ +F + Q ++      KWWEK   PNM  + S Q+ + +L  AGD+LV+V+F+   
Sbjct: 65  KKKIPAFVRCQTSLGIGRNQKWWEKELKPNMKSVTSPQDLVVSLRNAGDKLVVVDFFSPS 124

Query: 123 CASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFS 182
           C  C+AL P++C+ A+++PE+ FL+VN++E++ +C+SLN+ VLP+F FYRG+ G++ SFS
Sbjct: 125 CGGCKALHPKICKIAEKNPEVEFLQVNYEEHRSLCQSLNIHVLPFFRFYRGSSGRVCSFS 184

Query: 183 CSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLILEPSLAPQD 223
           C+ A  +K K+A+E H   +CSIG  KG+ +  L    A +D
Sbjct: 185 CTNATIRKFKEALEKHGREQCSIGETKGLEEKELVAMAANKD 226

[Close]

BLAST of CcUC05G081880 vs. TAIR 10
Match: AT1G08570.1 (atypical CYS HIS rich thioredoxin 4 )

HSP 1 Score: 148.3 bits (373), Expect = 7.4e-36
Identity = 63/129 (48.84%), Postives = 93/129 (72.09%), Query Frame = 0


Query: 82  KWWEKN-APNMIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPE 141
           KWWEK    NM +I S QE + +L+ AGD+LV+V+F+   C  C+AL P++C+ A+ +P+
Sbjct: 89  KWWEKGLKDNMREISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQFAEMNPD 148

Query: 142 ILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIEMHNTAR 201
           + FL+VN++E+K MC SL V VLP+F FYRG+ G++ SFSC+ A  +K +DA+  H   R
Sbjct: 149 VQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNATIKKFRDALAKHGPDR 208

Query: 202 CSIGPPKGV 210
           CS+GP KG+
Sbjct: 209 CSLGPTKGL 217

The following BLAST results are available for this feature:

BLAST of CcUC05G081880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437900.1	8.3e-122	95.98	PREDICTED: thioredoxin-like 2, chloroplastic [Cucumis melo]	[more]
XP_038877589.1	2.4e-121	95.54	thioredoxin-like 2, chloroplastic [Benincasa hispida]	[more]
XP_004133814.1	3.2e-121	95.54	thioredoxin-like 2, chloroplastic [Cucumis sativus] >KGN56427.1 hypothetical pro...	[more]
KAA0048892.1	1.3e-114	82.68	thioredoxin-like 2 [Cucumis melo var. makuwa] >TYK20842.1 thioredoxin-like 2 [Cu...	[more]
XP_022924452.1	2.3e-111	92.99	thioredoxin-like 2, chloroplastic [Cucurbita moschata] >XP_023526881.1 thioredox...	[more]

BLAST of CcUC05G081880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5TKD8	2.4e-71	69.70	Thioredoxin-like 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os...	[more]
Q8LEK4	3.2e-60	61.11	Thioredoxin-like 2-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g26160...	[more]
Q8LCT3	9.4e-60	62.07	Thioredoxin-like 2-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g29670...	[more]
Q10M18	4.1e-39	45.56	Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
O22779	5.6e-36	41.36	Thioredoxin-like 1-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g33270...	[more]

BLAST of CcUC05G081880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AV76	4.0e-122	95.98	thioredoxin-like 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483190 PE=4 S...	[more]
A0A0A0L760	1.5e-121	95.54	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G119600...	[more]
A0A5D3DB74	6.2e-115	82.68	Thioredoxin-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G0...	[more]
A0A6J1E8Z8	1.1e-111	92.99	thioredoxin-like 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111431951 ...	[more]
A0A6J1IY90	3.2e-111	92.52	thioredoxin-like 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111479561 PE...	[more]

BLAST of CcUC05G081880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29670.1	8.4e-72	63.96	atypical CYS HIS rich thioredoxin 2	[more]
AT4G26160.1	2.3e-61	61.11	atypical CYS HIS rich thioredoxin 1	[more]
AT4G29670.2	6.7e-61	62.07	atypical CYS HIS rich thioredoxin 2	[more]
AT2G33270.1	3.9e-37	41.36	atypical CYS HIS rich thioredoxin 3	[more]
AT1G08570.1	7.4e-36	48.84	atypical CYS HIS rich thioredoxin 4	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 95..180 e-value: 2.7E-17 score: 62.6
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 60..198 score: 11.323732
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 69..199 e-value: 1.0E-22 score: 82.2
None	No IPR available	PANTHER	PTHR43601	THIOREDOXIN, MITOCHONDRIAL	coord: 1..223
None	No IPR available	PANTHER	PTHR43601:SF19	THIOREDOXIN-LIKE 2, CHLOROPLASTIC	coord: 1..223
None	No IPR available	CDD	cd02947	TRX_family	coord: 98..194 e-value: 3.36711E-21 score: 82.2208
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 113..131
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 80..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G081880.1	CcUC05G081880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor