CcUC04G078660 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC04G078660
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	RAB GTPase homolog A1C
Location	CicolChr04: 33112033 .. 33114973 (-)
RNA-Seq Expression	CcUC04G078660
Synteny	CcUC04G078660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGAGAAGGGACAGTTGTTTGTATTGTTGCTCGCTTCACCTCTCCAGAGCAGGCTTCCTTCGCCTTTCCCACAAAACAAAGAAAGGGTAAAGTTCAAAAACCAAAAAAACACTGCTCCGATAAAAAAGAAAAGATTTTTACAGTGTGTGAGAGAGAAAATCTTGCGATCTGAAGAAAACAAGAACCTCTCTCTCTCTCTCTTCTCCACGGCTGGAGGGCTTCTGAAAAATGTCTGCCTATAGAGCTGAAGATGACTATGACTATCTCTTCAAGGTCGTCTTAATCGGAGATTCTGGCGTTGGCAAGTCCAATTTGCTTTCCCGCTTTACCAAAAACGAGTTCAGCCTCGAATCTAAGTCTACTATTGGGGTTGAGTTTGCTACTCGCAGTTTGAATCTTGATGGCAAGGTTATTAAGGCTCAGATTTGGGACACTGCTGGCCAAGAACGGTGATTTTTCCCCCTCCCTGCTTTTATTCCCTTTCTATGTTTCCGATTTCACATTTTATGATCTGGGTCCTTGTCTTTTATGGTGGAAATATGGTGTCACATATGGGGCTCTGCCTTTGTTTTATTGTTTCTCTTTCTTTTGCTTCTACTGATTTTGAAATGTACCTGCCCCTAATATAATTGCTTTTTAAGCTTCGATTAGCAATTTTCATCTTTGATTGGTTTAGATTATGTTTGTTCATTTTGTTTATATGGTTCGATAGGTTAGTTGTTGATTGCAATGGGGTACCAGACGGGTTTGGTGGATCTAAACTACAAGTGGTCTGTTAGAGCTTACAATACTTTATATCTAACCGGATGTTGCCTTCCCTTGTCATTTACCCCCACATCAAAACCTCAATTCACACTATATAGGTCGATTGTCCTTTCTAGTTTTTCCATGAGGGGGAGGGGTGGAGGGGTATCAATATGAGTTGAAAATGTAAGTAAAATGTGGAAACGTTGTTAATTTTGAAAATTGAAGTGTACTGTCAAGAGGTTGAGAGATATTTTAGGAGAAAATTGAGTTCTGTTTTGTTGTTTAATTTGCATCAGTACTTAACACCTAAATCACAGACATCCTATCGCTTTCGTGATAGATGCTACCTTGTCCTATAAAATTGCACAGAGAAAGAAACAAGAGAAATAGCAAATCGAGCCTTGGTTATGCGCATGCTAGAAACATGTCTGGAGGCCCTTTCCTTTGGATGGTAATTCAGGCATTACATGCTTGTTGGTACGAATTGCACAAGCAGATGCACCCAAAGTTCTCGAGTATGTTGGAAGATTGATCAGCTGTAATGTCCATTTTCAAAAAGTTTACTGTTCCTTAACTTTTCTCTTCCAAATAATTGTCTTTCCATTTTTAGCAACTGTGTTAGGTTATTCTGCCTCTATCGTAGAAGTGATTGAGTTTTGGTTTATTAATTTTGAGAAAAGTTCACCTCTTCAATTAGTGTTTGGGGTCGAGAGAGCAGAGGAATATCAAGTGGTATATCAAACTCATGTTACAGTAAATCTGTTGAACTGGTTTTAAGGAATCGTGTCTCTATGTGAAGATCTATTGAGGAACCAATGGACCTTACACTCTTCATAAGATAGATGAGCTACTCCTCTCATTGCCAATTAGTTTTGAGATGGAACCTCATATTATCAAATAAAATATAATTCAAAGTTCGATGCATATCTCCTATCAATGTAGAGATTGTTGACATGGAGTTTTAATTTATAAAATATATGAGACTGTTTCACCTCTTTTACTAGTTTATGAGGTCGACAGAACCCAATTGTGCTAACATCTTGGATGTTCTGCAGCAATAAGATTTATCTCTATTGTTTTGTTTATCTGGAAAAAGTGGCTTGAGACTCATTTTAACGATTGAGGAATGGCTGTAAGATAGTTGTCACATTTGGCACCTTAAGGCGAGCAAATTAGGATGCAATTGGAAAAGTTACCTTTAATACCTGTATATATCTCACTTATTGTTGGAGTTAACAAACTTTTTCTGTACTGAATGGTAGGTTTACTTGTGTGACAGACTTTTAACTTTGTTTGGTCTTGAAAACTATCTTTACTTGCCGTACTTTTCCACGTATCTCTTCTGGCATCTTAACTTCTCAAGTTCACAGGTATAGAGCGATTACAAGTGCTTACTATCGAGGAGCAGTTGGTGCCCTTCTTGTTTACGATGTTACACGACACTCCACATATGAAAATGTTGAGAAGTGGTTGAAGGAGTTGAGAGATCATACAGATCCCAACATTGTAGTAATGCTAGTTGGGAACAAATCAGATCTTCGCCACCTTGTGGCGGTGTCAACCGAGGATGCAAAATCATTTGCCGAGACAGAGTCCCTCTATTTCATGGAAACCTCTGCCCTTGAAGCCACAAATGTGGACAACGCCTTTGCCGAAGTGCTTACACAAATTTACCACATAGTGAGCAAGAAGGCTATAGAAGCTAGCGATGATGCTGCTGCATCAGCCGTTCTAGCGAAAGGGGAGAAAATCGATATCAGTAAGGACGTCTCTGAGGTAAAGAAAGGCGGTTGCTGTTCCAGCTAGACTACCAATCTCTAAAGTTGCTGCAGCAGCCTGAAGGTCATCTCCTCGCTCGACATCTATTTTACATTTTGTTTTACATATAGTACACCGTGGCCGTGTGAAATTTTTTTCCGGGGATGCATAGAGGTAGGGGGTTCATGGGGATTGATTTGATGTATCCTACTGTTTTGATTACTGATATCTTAACTTCTGATGCCAAAAATATGCTTAAGCTTTATACTCATTTGACTTTGGGGAATTACAGTTTTATACTCATTTGACTTTGAGGGACTTTGTATCCAAGTACAGAATTGTTGTGGCTCTTAGTTTCGAAACTCCAAGGTTTCTCTTATCTCTTGTGTGAACTATGCATATAAGAAAGATCTGTTGTGGTATTTTCTCCTTCCCC

mRNA sequence

TTGAGAAGGGACAGTTGTTTGTATTGTTGCTCGCTTCACCTCTCCAGAGCAGGCTTCCTTCGCCTTTCCCACAAAACAAAGAAAGGGTAAAGTTCAAAAACCAAAAAAACACTGCTCCGATAAAAAAGAAAAGATTTTTACAGTGTGTGAGAGAGAAAATCTTGCGATCTGAAGAAAACAAGAACCTCTCTCTCTCTCTCTTCTCCACGGCTGGAGGGCTTCTGAAAAATGTCTGCCTATAGAGCTGAAGATGACTATGACTATCTCTTCAAGGTCGTCTTAATCGGAGATTCTGGCGTTGGCAAGTCCAATTTGCTTTCCCGCTTTACCAAAAACGAGTTCAGCCTCGAATCTAAGTCTACTATTGGGGTTGAGTTTGCTACTCGCAGTTTGAATCTTGATGGCAAGGTTATTAAGGCTCAGATTTGGGACACTGCTGGCCAAGAACGGAGGCCCTTTCCTTTGGATGGTAATTCAGGCATTACATGCTTGTTGGTACGAATTGCACAAGCAGATGCACCCAAAGTTCTCGAGTATAGAGCGATTACAAGTGCTTACTATCGAGGAGCAGTTGGTGCCCTTCTTGTTTACGATGTTACACGACACTCCACATATGAAAATGTTGAGAAGTGGTTGAAGGAGTTGAGAGATCATACAGATCCCAACATTGTAGTAATGCTAGTTGGGAACAAATCAGATCTTCGCCACCTTGTGGCGGTGTCAACCGAGGATGCAAAATCATTTGCCGAGACAGAGTCCCTCTATTTCATGGAAACCTCTGCCCTTGAAGCCACAAATGTGGACAACGCCTTTGCCGAAGTGCTTACACAAATTTACCACATAGTGAGCAAGAAGGCTATAGAAGCTAGCGATGATGCTGCTGCATCAGCCGTTCTAGCGAAAGGGGAGAAAATCGATATCAGTAAGGACGTCTCTGAGGTAAAGAAAGGCGGTTGCTGTTCCAGCTAGACTACCAATCTCTAAAGTTGCTGCAGCAGCCTGAAGGTCATCTCCTCGCTCGACATCTATTTTACATTTTGTTTTACATATAGTACACCGTGGCCGTGTGAAATTTTTTTCCGGGGATGCATAGAGGTAGGGGGTTCATGGGGATTGATTTGATGTATCCTACTGTTTTGATTACTGATATCTTAACTTCTGATGCCAAAAATATGCTTAAGCTTTATACTCATTTGACTTTGGGGAATTACAGTTTTATACTCATTTGACTTTGAGGGACTTTGTATCCAAGTACAGAATTGTTGTGGCTCTTAGTTTCGAAACTCCAAGGTTTCTCTTATCTCTTGTGTGAACTATGCATATAAGAAAGATCTGTTGTGGTATTTTCTCCTTCCCC

Coding sequence (CDS)

ATGTCTGCCTATAGAGCTGAAGATGACTATGACTATCTCTTCAAGGTCGTCTTAATCGGAGATTCTGGCGTTGGCAAGTCCAATTTGCTTTCCCGCTTTACCAAAAACGAGTTCAGCCTCGAATCTAAGTCTACTATTGGGGTTGAGTTTGCTACTCGCAGTTTGAATCTTGATGGCAAGGTTATTAAGGCTCAGATTTGGGACACTGCTGGCCAAGAACGGAGGCCCTTTCCTTTGGATGGTAATTCAGGCATTACATGCTTGTTGGTACGAATTGCACAAGCAGATGCACCCAAAGTTCTCGAGTATAGAGCGATTACAAGTGCTTACTATCGAGGAGCAGTTGGTGCCCTTCTTGTTTACGATGTTACACGACACTCCACATATGAAAATGTTGAGAAGTGGTTGAAGGAGTTGAGAGATCATACAGATCCCAACATTGTAGTAATGCTAGTTGGGAACAAATCAGATCTTCGCCACCTTGTGGCGGTGTCAACCGAGGATGCAAAATCATTTGCCGAGACAGAGTCCCTCTATTTCATGGAAACCTCTGCCCTTGAAGCCACAAATGTGGACAACGCCTTTGCCGAAGTGCTTACACAAATTTACCACATAGTGAGCAAGAAGGCTATAGAAGCTAGCGATGATGCTGCTGCATCAGCCGTTCTAGCGAAAGGGGAGAAAATCGATATCAGTAAGGACGTCTCTGAGGTAAAGAAAGGCGGTTGCTGTTCCAGCTAG

Protein sequence

MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERRPFPLDGNSGITCLLVRIAQADAPKVLEYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAIEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS

Homology

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BLAST of CcUC04G078660 vs. NCBI nr
Match: XP_038892728.1 (ras-related protein RABA1c-like [Benincasa hispida])

HSP 1 Score: 404.1 bits (1037), Expect = 8.9e-109
Identity = 216/246 (87.80%), Postives = 218/246 (88.62%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERRPFPLDGNSGITCLLVRIAQADAPKVLEYRAITSAYYRGAVGALLV 120
           VIKAQIWDTAGQER                            YRAITSAYYRGAVGALLV
Sbjct: 61  VIKAQIWDTAGQER----------------------------YRAITSAYYRGAVGALLV 120

Query: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180
           YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF
Sbjct: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180

Query: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAIEASDDAAASAVLAKGEKIDISKDVSEVKK 240
           METSALEATNVDNAFAEVLTQIYHIVSKKA+EA+DDAAASAVLAKGEKIDISKDVSEVKK
Sbjct: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAMEANDDAAASAVLAKGEKIDISKDVSEVKK 218

Query: 241 GGCCSS 247
           GGCCSS
Sbjct: 241 GGCCSS 218

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BLAST of CcUC04G078660 vs. NCBI nr
Match: XP_004134652.1 (ras-related protein RABA1c [Cucumis sativus] >XP_008439722.1 PREDICTED: ras-related protein RABA1c-like [Cucumis melo] >ADN34029.1 GTP-binding protein [Cucumis melo subsp. melo] >KAA0052607.1 ras-related protein RABA1c [Cucumis melo var. makuwa] >KGN49321.1 hypothetical protein Csa_002721 [Cucumis sativus] >TYK13220.1 ras-related protein RABA1c [Cucumis melo var. makuwa])

HSP 1 Score: 401.7 bits (1031), Expect = 4.4e-108
Identity = 214/246 (86.99%), Postives = 217/246 (88.21%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERRPFPLDGNSGITCLLVRIAQADAPKVLEYRAITSAYYRGAVGALLV 120
           VIKAQIWDTAGQER                            YRAITSAYYRGAVGALLV
Sbjct: 61  VIKAQIWDTAGQER----------------------------YRAITSAYYRGAVGALLV 120

Query: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180
           YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF
Sbjct: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180

Query: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAIEASDDAAASAVLAKGEKIDISKDVSEVKK 240
           METSALEATNVDNAFAEVLTQIYHIVSKKA+E +DDAAASAV+AKGEKIDISKDVSEVKK
Sbjct: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKDVSEVKK 218

Query: 241 GGCCSS 247
           GGCCSS
Sbjct: 241 GGCCSS 218

[Close]

BLAST of CcUC04G078660 vs. NCBI nr
Match: XP_022926120.1 (ras-related protein RABA1c-like [Cucurbita moschata] >XP_022978763.1 ras-related protein RABA1c-like [Cucurbita maxima] >XP_023544519.1 ras-related protein RABA1c-like [Cucurbita pepo subsp. pepo] >KAG6581369.1 Ras-related protein RABA1c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 400.6 bits (1028), Expect = 9.8e-108
Identity = 213/246 (86.59%), Postives = 217/246 (88.21%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERRPFPLDGNSGITCLLVRIAQADAPKVLEYRAITSAYYRGAVGALLV 120
           VIKAQIWDTAGQER                            YRAITSAYYRGAVGAL+V
Sbjct: 61  VIKAQIWDTAGQER----------------------------YRAITSAYYRGAVGALIV 120

Query: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180
           YDVTRHSTYENVEKWLKELRDHTDPNIV+MLVGNKSDLRHLVAVSTEDAKSFAETESLYF
Sbjct: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVIMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180

Query: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAIEASDDAAASAVLAKGEKIDISKDVSEVKK 240
           METSALEA NVDNAFAEVLTQIYHIVSKKA++ASDDAAASAVLAKGEKIDISKDVSEVKK
Sbjct: 181 METSALEAMNVDNAFAEVLTQIYHIVSKKAMDASDDAAASAVLAKGEKIDISKDVSEVKK 218

Query: 241 GGCCSS 247
           GGCCSS
Sbjct: 241 GGCCSS 218

[Close]

BLAST of CcUC04G078660 vs. NCBI nr
Match: XP_022142300.1 (ras-related protein RABA1c [Momordica charantia])

HSP 1 Score: 398.3 bits (1022), Expect = 4.9e-107
Identity = 213/246 (86.59%), Postives = 216/246 (87.80%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLD K
Sbjct: 1   MAAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDSK 60

Query: 61  VIKAQIWDTAGQERRPFPLDGNSGITCLLVRIAQADAPKVLEYRAITSAYYRGAVGALLV 120
           VIKAQIWDTAGQER                            YRAITSAYYRGAVGALLV
Sbjct: 61  VIKAQIWDTAGQER----------------------------YRAITSAYYRGAVGALLV 120

Query: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180
           YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF
Sbjct: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180

Query: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAIEASDDAAASAVLAKGEKIDISKDVSEVKK 240
           METSALEATNVDNAFAEVLTQIYHIVSKKA+EASDDAAASAV+AKGEKIDISKDVS VKK
Sbjct: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAMEASDDAAASAVVAKGEKIDISKDVSAVKK 218

Query: 241 GGCCSS 247
           GGCCSS
Sbjct: 241 GGCCSS 218

[Close]

BLAST of CcUC04G078660 vs. NCBI nr
Match: XP_023518462.1 (ras-related protein RABA1c-like [Cucurbita pepo subsp. pepo] >KAG7026514.1 Ras-related protein RABA1c, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 385.2 bits (988), Expect = 4.3e-103
Identity = 202/246 (82.11%), Postives = 214/246 (86.99%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLE+KSTIGVEFATRSL++DG+
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60

Query: 61  VIKAQIWDTAGQERRPFPLDGNSGITCLLVRIAQADAPKVLEYRAITSAYYRGAVGALLV 120
           VIKAQIWDTAGQER                            YRAITSAYYRGAVGALLV
Sbjct: 61  VIKAQIWDTAGQER----------------------------YRAITSAYYRGAVGALLV 120

Query: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180
           YDVTRH+TYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAV TEDAKSFAETES+YF
Sbjct: 121 YDVTRHATYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVPTEDAKSFAETESVYF 180

Query: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAIEASDDAAASAVLAKGEKIDISKDVSEVKK 240
           METSALE+TNVDNAF EVL QIYH+VSKKA+EAS+DAAAS VLAKGE+IDISKDVSE+KK
Sbjct: 181 METSALESTNVDNAFVEVLKQIYHLVSKKAMEASNDAAASVVLAKGERIDISKDVSEIKK 218

Query: 241 GGCCSS 247
           GGCCSS
Sbjct: 241 GGCCSS 218

[Close]

BLAST of CcUC04G078660 vs. ExPASy Swiss-Prot
Match: Q9FK68 (Ras-related protein RABA1c OS=Arabidopsis thaliana OX=3702 GN=RABA1C PE=1 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 2.8e-97
Identity = 191/246 (77.64%), Postives = 206/246 (83.74%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+D+YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLN+D K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERRPFPLDGNSGITCLLVRIAQADAPKVLEYRAITSAYYRGAVGALLV 120
           VIKAQIWDTAGQER                            YRAITSAYYRGAVGALLV
Sbjct: 61  VIKAQIWDTAGQER----------------------------YRAITSAYYRGAVGALLV 120

Query: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180
           YDVTRHST+ENVE WLKELR+HTDPNIVVMLVGNKSDLRHLVAV TEDAKSFAE ESLYF
Sbjct: 121 YDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYF 180

Query: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAIEASDDAAASAVLAKGEKIDISKDVSEVKK 240
           METSALEATNV+NAFAEVLTQI+HIVSKKA+EA+ ++A   V +KG+KIDI KDVS VKK
Sbjct: 181 METSALEATNVENAFAEVLTQIHHIVSKKAMEAASESA--NVPSKGDKIDIGKDVSAVKK 216

Query: 241 GGCCSS 247
           GGCCS+
Sbjct: 241 GGCCSN 216

[Close]

BLAST of CcUC04G078660 vs. ExPASy Swiss-Prot
Match: P40393 (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC2 PE=2 SV=2)

HSP 1 Score: 349.0 bits (894), Expect = 4.4e-95
Identity = 184/244 (75.41%), Postives = 200/244 (81.97%), Query Frame = 0


Query: 2   SAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKV 61
           + YRAEDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSL +DGKV
Sbjct: 3   AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62

Query: 62  IKAQIWDTAGQERRPFPLDGNSGITCLLVRIAQADAPKVLEYRAITSAYYRGAVGALLVY 121
           +KAQIWDTAGQER                            YRAITSAYYRGAVGALLVY
Sbjct: 63  VKAQIWDTAGQER----------------------------YRAITSAYYRGAVGALLVY 122

Query: 122 DVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFM 181
           DVTRHST+ENVE+WLKELRDHTDPNIVVMLVGNKSDLRHLVAV T++ K+FAE ESLYFM
Sbjct: 123 DVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFM 182

Query: 182 ETSALEATNVDNAFAEVLTQIYHIVSKKAIEASDDAAASAVLAKGEKIDISKDVSEVKKG 241
           ETSALE+TNV+NAFAEVLTQIY IVSK+++EA DDA +     KGEKI+I  DVS VKKG
Sbjct: 183 ETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDDAGSGP--GKGEKINIKDDVSAVKKG 216

Query: 242 GCCS 246
           GCCS
Sbjct: 243 GCCS 216

[Close]

BLAST of CcUC04G078660 vs. ExPASy Swiss-Prot
Match: Q9SN35 (Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=1 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.3e-94
Identity = 186/246 (75.61%), Postives = 204/246 (82.93%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLN++ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERRPFPLDGNSGITCLLVRIAQADAPKVLEYRAITSAYYRGAVGALLV 120
           VIKAQIWDTAGQER                            YRAITSAYYRGAVGALLV
Sbjct: 61  VIKAQIWDTAGQER----------------------------YRAITSAYYRGAVGALLV 120

Query: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180
           YDVTRHST+ENVE+WL+ELRDHTDPNIVVMLVGNKSDLRHLVAV TEDAKSFAE ESLYF
Sbjct: 121 YDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAENESLYF 180

Query: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAIEASDDAAASAVLAKGEKIDISKDVSEVKK 240
           METSALE+TNV+NAF+EVLTQIYH+VSKKA+EA +D  +  V +KGEKID+  DVS VKK
Sbjct: 181 METSALESTNVENAFSEVLTQIYHVVSKKAMEAGED--SGNVPSKGEKIDV--DVSAVKK 214

Query: 241 GGCCSS 247
            GCCS+
Sbjct: 241 TGCCSN 214

[Close]

BLAST of CcUC04G078660 vs. ExPASy Swiss-Prot
Match: Q01111 (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 3.9e-91
Identity = 177/246 (71.95%), Postives = 194/246 (78.86%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+D+YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFAT+SLN+D K
Sbjct: 1   MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60

Query: 61  VIKAQIWDTAGQERRPFPLDGNSGITCLLVRIAQADAPKVLEYRAITSAYYRGAVGALLV 120
           VIKAQIWDTAGQER                            YRAITSAYYRGAVGALLV
Sbjct: 61  VIKAQIWDTAGQER----------------------------YRAITSAYYRGAVGALLV 120

Query: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180
           YDVTRH TYENV +WLKELRDHTDPNIVVML+GNKSDLRHLVAVST++AK  AE E LYF
Sbjct: 121 YDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTDEAKGLAEREGLYF 180

Query: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAIEASDDAAASAVLAKGEKIDISKDVSEVKK 240
           METSALEATNV+NAF E LTQIY IVSKKA+EA D+ A S+   KGE I+I  + S  KK
Sbjct: 181 METSALEATNVENAFTEALTQIYRIVSKKAVEAGDEGATSSAPPKGETINIKDEGSSWKK 218

Query: 241 GGCCSS 247
            GCCSS
Sbjct: 241 FGCCSS 218

[Close]

BLAST of CcUC04G078660 vs. ExPASy Swiss-Prot
Match: Q39222 (Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 1.3e-89
Identity = 175/246 (71.14%), Postives = 197/246 (80.08%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YR EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+L +DGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERRPFPLDGNSGITCLLVRIAQADAPKVLEYRAITSAYYRGAVGALLV 120
           V+KAQIWDTAGQER                            YRAITSAYYRGAVGALLV
Sbjct: 61  VVKAQIWDTAGQER----------------------------YRAITSAYYRGAVGALLV 120

Query: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180
           YDVTR +T+ENV++WLKEL++HTDPNIVVMLVGNKSDLRHL+AV TED KS+AE ESL F
Sbjct: 121 YDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCF 180

Query: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAIEASDDAAASAVLAKGEKIDISKDVSEVKK 240
           METSALEATNV++AFAEVLTQIY I SKK +EA +D  AS  + KGEKI++  DVS +KK
Sbjct: 181 METSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNAS--VPKGEKIEVKNDVSALKK 216

Query: 241 GGCCSS 247
            GCCS+
Sbjct: 241 LGCCSN 216

[Close]

BLAST of CcUC04G078660 vs. ExPASy TrEMBL
Match: A0A5D3CP64 (Ras-related protein RABA1c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008350 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.1e-108
Identity = 214/246 (86.99%), Postives = 217/246 (88.21%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERRPFPLDGNSGITCLLVRIAQADAPKVLEYRAITSAYYRGAVGALLV 120
           VIKAQIWDTAGQER                            YRAITSAYYRGAVGALLV
Sbjct: 61  VIKAQIWDTAGQER----------------------------YRAITSAYYRGAVGALLV 120

Query: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180
           YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF
Sbjct: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180

Query: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAIEASDDAAASAVLAKGEKIDISKDVSEVKK 240
           METSALEATNVDNAFAEVLTQIYHIVSKKA+E +DDAAASAV+AKGEKIDISKDVSEVKK
Sbjct: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKDVSEVKK 218

Query: 241 GGCCSS 247
           GGCCSS
Sbjct: 241 GGCCSS 218

[Close]

BLAST of CcUC04G078660 vs. ExPASy TrEMBL
Match: E5GC30 (GTP-binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.1e-108
Identity = 214/246 (86.99%), Postives = 217/246 (88.21%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERRPFPLDGNSGITCLLVRIAQADAPKVLEYRAITSAYYRGAVGALLV 120
           VIKAQIWDTAGQER                            YRAITSAYYRGAVGALLV
Sbjct: 61  VIKAQIWDTAGQER----------------------------YRAITSAYYRGAVGALLV 120

Query: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180
           YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF
Sbjct: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180

Query: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAIEASDDAAASAVLAKGEKIDISKDVSEVKK 240
           METSALEATNVDNAFAEVLTQIYHIVSKKA+E +DDAAASAV+AKGEKIDISKDVSEVKK
Sbjct: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKDVSEVKK 218

Query: 241 GGCCSS 247
           GGCCSS
Sbjct: 241 GGCCSS 218

[Close]

BLAST of CcUC04G078660 vs. ExPASy TrEMBL
Match: A0A0A0KNM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519720 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.1e-108
Identity = 214/246 (86.99%), Postives = 217/246 (88.21%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERRPFPLDGNSGITCLLVRIAQADAPKVLEYRAITSAYYRGAVGALLV 120
           VIKAQIWDTAGQER                            YRAITSAYYRGAVGALLV
Sbjct: 61  VIKAQIWDTAGQER----------------------------YRAITSAYYRGAVGALLV 120

Query: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180
           YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF
Sbjct: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180

Query: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAIEASDDAAASAVLAKGEKIDISKDVSEVKK 240
           METSALEATNVDNAFAEVLTQIYHIVSKKA+E +DDAAASAV+AKGEKIDISKDVSEVKK
Sbjct: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKDVSEVKK 218

Query: 241 GGCCSS 247
           GGCCSS
Sbjct: 241 GGCCSS 218

[Close]

BLAST of CcUC04G078660 vs. ExPASy TrEMBL
Match: A0A1S3B019 (ras-related protein RABA1c-like OS=Cucumis melo OX=3656 GN=LOC103484436 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.1e-108
Identity = 214/246 (86.99%), Postives = 217/246 (88.21%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERRPFPLDGNSGITCLLVRIAQADAPKVLEYRAITSAYYRGAVGALLV 120
           VIKAQIWDTAGQER                            YRAITSAYYRGAVGALLV
Sbjct: 61  VIKAQIWDTAGQER----------------------------YRAITSAYYRGAVGALLV 120

Query: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180
           YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF
Sbjct: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180

Query: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAIEASDDAAASAVLAKGEKIDISKDVSEVKK 240
           METSALEATNVDNAFAEVLTQIYHIVSKKA+E +DDAAASAV+AKGEKIDISKDVSEVKK
Sbjct: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKDVSEVKK 218

Query: 241 GGCCSS 247
           GGCCSS
Sbjct: 241 GGCCSS 218

[Close]

BLAST of CcUC04G078660 vs. ExPASy TrEMBL
Match: A0A6J1IU78 (ras-related protein RABA1c-like OS=Cucurbita maxima OX=3661 GN=LOC111478625 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 4.8e-108
Identity = 213/246 (86.59%), Postives = 217/246 (88.21%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERRPFPLDGNSGITCLLVRIAQADAPKVLEYRAITSAYYRGAVGALLV 120
           VIKAQIWDTAGQER                            YRAITSAYYRGAVGAL+V
Sbjct: 61  VIKAQIWDTAGQER----------------------------YRAITSAYYRGAVGALIV 120

Query: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180
           YDVTRHSTYENVEKWLKELRDHTDPNIV+MLVGNKSDLRHLVAVSTEDAKSFAETESLYF
Sbjct: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVIMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180

Query: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAIEASDDAAASAVLAKGEKIDISKDVSEVKK 240
           METSALEA NVDNAFAEVLTQIYHIVSKKA++ASDDAAASAVLAKGEKIDISKDVSEVKK
Sbjct: 181 METSALEAMNVDNAFAEVLTQIYHIVSKKAMDASDDAAASAVLAKGEKIDISKDVSEVKK 218

Query: 241 GGCCSS 247
           GGCCSS
Sbjct: 241 GGCCSS 218

[Close]

BLAST of CcUC04G078660 vs. TAIR 10
Match: AT5G45750.1 (RAB GTPase homolog A1C )

HSP 1 Score: 356.3 bits (913), Expect = 2.0e-98
Identity = 191/246 (77.64%), Postives = 206/246 (83.74%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+D+YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLN+D K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERRPFPLDGNSGITCLLVRIAQADAPKVLEYRAITSAYYRGAVGALLV 120
           VIKAQIWDTAGQER                            YRAITSAYYRGAVGALLV
Sbjct: 61  VIKAQIWDTAGQER----------------------------YRAITSAYYRGAVGALLV 120

Query: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180
           YDVTRHST+ENVE WLKELR+HTDPNIVVMLVGNKSDLRHLVAV TEDAKSFAE ESLYF
Sbjct: 121 YDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYF 180

Query: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAIEASDDAAASAVLAKGEKIDISKDVSEVKK 240
           METSALEATNV+NAFAEVLTQI+HIVSKKA+EA+ ++A   V +KG+KIDI KDVS VKK
Sbjct: 181 METSALEATNVENAFAEVLTQIHHIVSKKAMEAASESA--NVPSKGDKIDIGKDVSAVKK 216

Query: 241 GGCCSS 247
           GGCCS+
Sbjct: 241 GGCCSN 216

[Close]

BLAST of CcUC04G078660 vs. TAIR 10
Match: AT4G18800.1 (RAB GTPase homolog A1D )

HSP 1 Score: 347.4 bits (890), Expect = 9.2e-96
Identity = 186/246 (75.61%), Postives = 204/246 (82.93%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLN++ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERRPFPLDGNSGITCLLVRIAQADAPKVLEYRAITSAYYRGAVGALLV 120
           VIKAQIWDTAGQER                            YRAITSAYYRGAVGALLV
Sbjct: 61  VIKAQIWDTAGQER----------------------------YRAITSAYYRGAVGALLV 120

Query: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180
           YDVTRHST+ENVE+WL+ELRDHTDPNIVVMLVGNKSDLRHLVAV TEDAKSFAE ESLYF
Sbjct: 121 YDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAENESLYF 180

Query: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAIEASDDAAASAVLAKGEKIDISKDVSEVKK 240
           METSALE+TNV+NAF+EVLTQIYH+VSKKA+EA +D  +  V +KGEKID+  DVS VKK
Sbjct: 181 METSALESTNVENAFSEVLTQIYHVVSKKAMEAGED--SGNVPSKGEKIDV--DVSAVKK 214

Query: 241 GGCCSS 247
            GCCS+
Sbjct: 241 TGCCSN 214

[Close]

BLAST of CcUC04G078660 vs. TAIR 10
Match: AT1G16920.1 (RAB GTPase homolog A1B )

HSP 1 Score: 330.9 bits (847), Expect = 8.9e-91
Identity = 175/246 (71.14%), Postives = 197/246 (80.08%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YR EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+L +DGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERRPFPLDGNSGITCLLVRIAQADAPKVLEYRAITSAYYRGAVGALLV 120
           V+KAQIWDTAGQER                            YRAITSAYYRGAVGALLV
Sbjct: 61  VVKAQIWDTAGQER----------------------------YRAITSAYYRGAVGALLV 120

Query: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180
           YDVTR +T+ENV++WLKEL++HTDPNIVVMLVGNKSDLRHL+AV TED KS+AE ESL F
Sbjct: 121 YDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCF 180

Query: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAIEASDDAAASAVLAKGEKIDISKDVSEVKK 240
           METSALEATNV++AFAEVLTQIY I SKK +EA +D  AS  + KGEKI++  DVS +KK
Sbjct: 181 METSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNAS--VPKGEKIEVKNDVSALKK 216

Query: 241 GGCCSS 247
            GCCS+
Sbjct: 241 LGCCSN 216

[Close]

BLAST of CcUC04G078660 vs. TAIR 10
Match: AT3G15060.1 (RAB GTPase homolog A1G )

HSP 1 Score: 319.3 bits (817), Expect = 2.7e-87
Identity = 169/248 (68.15%), Postives = 195/248 (78.63%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+AYRA+DDYD+L+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS+++D K
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  VIKAQIWDTAGQERRPFPLDGNSGITCLLVRIAQADAPKVLEYRAITSAYYRGAVGALLV 120
           ++KAQIWDTAGQER                            YRAITSAYYRGAVGALLV
Sbjct: 61  IVKAQIWDTAGQER----------------------------YRAITSAYYRGAVGALLV 120

Query: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180
           YDVTRH T+ENVE+WLKELRDHT+ NIV+MLVGNK+DLRHL AVSTEDAK+FAE E+ +F
Sbjct: 121 YDVTRHVTFENVERWLKELRDHTEANIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFF 180

Query: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAIEASDDAAASAVLAKGEKIDISK--DVSEV 240
           METSALEA NV+NAF EVL+QIY + SKKA++  DD      L KG+ I++    DVSEV
Sbjct: 181 METSALEALNVENAFTEVLSQIYRVASKKALDIGDD---HTTLPKGQSINVGSKDDVSEV 217

Query: 241 KKGGCCSS 247
           KK GCCSS
Sbjct: 241 KKVGCCSS 217

[Close]

BLAST of CcUC04G078660 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 318.9 bits (816), Expect = 3.5e-87
Identity = 169/248 (68.15%), Postives = 196/248 (79.03%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+AYRA+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS+++D K
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  VIKAQIWDTAGQERRPFPLDGNSGITCLLVRIAQADAPKVLEYRAITSAYYRGAVGALLV 120
           ++KAQIWDTAGQER                            YRAITSAYYRGAVGALLV
Sbjct: 61  IVKAQIWDTAGQER----------------------------YRAITSAYYRGAVGALLV 120

Query: 121 YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYF 180
           YDVTRH T+ENVE+WLKELRDHTD NIV+M VGNK+DLRHL AVSTEDAK+FAE E+ +F
Sbjct: 121 YDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKADLRHLRAVSTEDAKAFAERENTFF 180

Query: 181 METSALEATNVDNAFAEVLTQIYHIVSKKAIEASDDAAASAVLAKGEKIDISK--DVSEV 240
           METSALE+ NV+NAF EVL+QIY +VS+KA++  DD AA   L KG+ I++    DVS V
Sbjct: 181 METSALESMNVENAFTEVLSQIYRVVSRKALDIGDDPAA---LPKGQTINVGSKDDVSAV 217

Query: 241 KKGGCCSS 247
           KK GCCS+
Sbjct: 241 KKVGCCSN 217

The following BLAST results are available for this feature:

BLAST of CcUC04G078660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892728.1	8.9e-109	87.80	ras-related protein RABA1c-like [Benincasa hispida]	[more]
XP_004134652.1	4.4e-108	86.99	ras-related protein RABA1c [Cucumis sativus] >XP_008439722.1 PREDICTED: ras-rela...	[more]
XP_022926120.1	9.8e-108	86.59	ras-related protein RABA1c-like [Cucurbita moschata] >XP_022978763.1 ras-related...	[more]
XP_022142300.1	4.9e-107	86.59	ras-related protein RABA1c [Momordica charantia]	[more]
XP_023518462.1	4.3e-103	82.11	ras-related protein RABA1c-like [Cucurbita pepo subsp. pepo] >KAG7026514.1 Ras-r...	[more]

BLAST of CcUC04G078660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK68	2.8e-97	77.64	Ras-related protein RABA1c OS=Arabidopsis thaliana OX=3702 GN=RABA1C PE=1 SV=1	[more]
P40393	4.4e-95	75.41	Ras-related protein RIC2 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC2 PE=2 S...	[more]
Q9SN35	1.3e-94	75.61	Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=1 SV=1	[more]
Q01111	3.9e-91	71.95	Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1	[more]
Q39222	1.3e-89	71.14	Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1	[more]

BLAST of CcUC04G078660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CP64	2.1e-108	86.99	Ras-related protein RABA1c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
E5GC30	2.1e-108	86.99	GTP-binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A0A0KNM1	2.1e-108	86.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519720 PE=4 SV=1	[more]
A0A1S3B019	2.1e-108	86.99	ras-related protein RABA1c-like OS=Cucumis melo OX=3656 GN=LOC103484436 PE=4 SV=...	[more]
A0A6J1IU78	4.8e-108	86.59	ras-related protein RABA1c-like OS=Cucurbita maxima OX=3661 GN=LOC111478625 PE=4...	[more]

BLAST of CcUC04G078660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45750.1	2.0e-98	77.64	RAB GTPase homolog A1C	[more]
AT4G18800.1	9.2e-96	75.61	RAB GTPase homolog A1D	[more]
AT1G16920.1	8.9e-91	71.14	RAB GTPase homolog A1B	[more]
AT3G15060.1	2.7e-87	68.15	RAB GTPase homolog A1G	[more]
AT5G60860.1	3.5e-87	68.15	RAB GTPase homolog A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 180..202 score: 40.43 coord: 14..35 score: 55.22 coord: 37..53 score: 36.77 coord: 55..77 score: 48.65
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..205 e-value: 1.1E-98 score: 343.8
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..205 e-value: 1.1E-13 score: 61.5
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..238 e-value: 0.0037 score: -3.1
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 102..246
None	No IPR available	PANTHER	PTHR47979:SF27	RAS-RELATED PROTEIN RIC2	coord: 102..246 coord: 1..74
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..74
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..214 score: 10.475939
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..244 score: 33.359749
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..203 e-value: 8.1232E-123 score: 344.158
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..201 e-value: 2.9E-10 score: 12.4
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 102..203 e-value: 5.1E-31 score: 107.4 coord: 15..74 e-value: 5.0E-22 score: 78.2
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..246 score: 15.621757
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..244 e-value: 8.6E-69 score: 232.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..208
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 102..198 e-value: 6.8E-16 score: 56.4 coord: 12..75 e-value: 4.8E-18 score: 63.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC04G078660.1	CcUC04G078660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005768	endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding