CcUC04G077910 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC04G077910
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr04: 32560504 .. 32564650 (-)
RNA-Seq ExpressionCcUC04G077910
SyntenyCcUC04G077910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTACGAAAGGCTTATACAAATGGTTATCGATGTGGTGGGTGCATTTTTTAAAAGCATTTGTGTGCTGTAGATTCAAGGCATACCAGATAGCCACAAGCTAGCTTGTGTGCTTTGAGTTTGGCCGTCGACAGCGTTTCTTGCTCGTTTAGTATCTGTATACTTTCTTTACATGGGTTCTTTAGGGTTCCGGAGGTTGAAGGATTGAGTTTCATTTGCAGCTCTTTTGTCACGCACATTTCAACAACATCAACTGAAAGCTCAGTTTCGAGAGCAACGTACTGCAGAAGAAAGGAAGTTTAGGAATCAACTAAATAAATGAATTTAAGACTTTAAACGGATGAAGTGCAGCTCCACTTAATAACAGATTACTTGACTTAGGTGTCCAATCGTCACTGAAGGCCTGCAGCAAATATATGGTCTTTGCAATGCGGGTATTCTAGTTTCATCGATGGAAACGAGCACAAGGTGGATGTCCAACTAAAAGTCAGGAAGAAAGGCAAAAGTCATTGATGGATAGAAACATAAAAGATCGTTGAGCTTTTAGGCAGCTAAAAGAGGCATAGCAGCATGCATGTGATTCAATAGGCGAGCCACGTATACGTTAACATGTACATAGTTTATTGATAGGGAAGTTTAGTAACACCTCAAATTGTTGTTTTTACCTCCTCCTCACTGACATTTTCTGAGTTTCGAACATAATCCGACAGCTTCATGATGCGGTTATTCCTCGAATTTTTACCAGCCCCCCCATTTATACCTCCATATCTAGTGTGACTTCTTATTCCACCTTTGCCCCAAGAAAGTTTTTCTGAGCTACCTACAAGGCCTACAGATGCACCAACTTTTTCTTTGTTCACTTCATAATCATTTTCGATACCAGCACCATCTGCTCCGTCGGCTCCAGTAGCTGTAGAAGACTGAGAAAATCGAACAGGACCACCTCTCCTGGATCTTTTAGGTCTAGTGTCCATTCGCTCATCAGCAGAAGAAGAATTTTTGCTGGCATCATAATCATTTTCGTCCTCGTTTTCATCAAAGCGTAGACTCTCAATATGATTTTGAAAGCTTTTGCGTCCTCTAGAACTCAATCTCCTCGAAGGTTTAGAACGTTTCCTACCCAAAGCTTCAGTTTGCCGTTGAAGTGTCTGAGCAATGGAAGTTTGAATCTGCAAGATAAACAGAAAAGTAACATTTTAGACCAAATATGAAGAAGAAGGATCAAGTGTGATCATAGATACCTGATACAAGTACAATCTATAATAGCCATGTTGGTTTCCAGCACGAGATGTTTCCAAGTAAAATGGAATAGAAAAGCACAACAGCTGAGACAAATATGCTCTATTTGATGTCCCAATGCTCCCACAACTTTGCATTACGTATTTATCAAATAATGATTTAGGTAATTCCTCTCTCTCTTAATCAATTTCAGCATGGCAAAATCTGTGGTTTTTTGTAATCGAACAATGTAAAGTAAGCTCATCAACTCTGGAAAACAAACAAATTCGTGTCAATAGTGATAAATATGCACAGAACTTGGCCTTCTCACCTGCTTATTACGAGCTTTCTCTTCTTCTTGAAAAGCCAGTTCCTAAAAAAGAAAAGGAAAAGAAAAAGAAGAATTAACAATATTGGGGTATGCAGAAATGATGATATCAATCATCAAACACCAAGCTTGCAAGCTTAAACATAATATTCCAACCTCTTCCTCATATTTGTCAATATCTGGATACAACACAGCAATCAAGGTATCATAATTTGGATCATCTCTCAGAGAGCGTCGACTGGCACAATGAGTGCGGCAAGCAGGGCACTCATTGTTACTGCAGCAAATTTCAGTAAAAGTTTAGAGGAAGCCAGAAGGAAAGTTGTGCTACGATATATATTTATTTTCTTGAGCTGTATAGCAATTAGCAAGATCAAGAACATATTATTACATAAGAGCATACCCTAGACGCATTGATTTGTCTATGCATTCCCTGCAAAAGCGGTGCAGACATTCCATCACAGTTCTGGTTTTTCTGATTATTCCTGCACATTAGGAATTGAAAACTTTATCGATCTCCTTAAGAATCCTACACATGCATGAACATGGAGAAGACCATCCAAAGTGAGCTCTGAGGTTGCATCACCAAATCCAGCTAAATATACTTCCCAAGCATGCTAAGACTTAGCATGTCATGGCTCATAGGATTTGGATATATCCACTAAAAAATGTCAAATTTCAGGAATGTTTCAATTTGGAATTTAGTTATCGTTTTATGATAAGGAAGAATTTTGGGTGTTTTCTTTATCAGATAGCTGCATGAACTGAAAGTAAGGATCCAGAATTTTGACAATAAGAGCTTGAGTAAACAATAATTTGAAAGTCATGCATAACTTTACTACTTGTTATGTGTAAACATGTACCATCATAAACTGGCTCCATGTGAACTTATGTAGCCTGAAGGCTGAAAGGGTAAGGTTCGAAAAAGAATGCAGAACACCAAAAGAAATGAAAACCGAATTCCATAGCTTCATATGCTCAAGAATGCACTCACTCTACAGTCCAATTTTATTACATTAACGGAATGGCCTAATCACAAAATGCAAAACTCCGTAACGAAGTTGATGTTAGGACAAATAAGTGGAGGTAGAAAAGTTTGCCGTCTTAACTGCTAATTTACCTGTCGGGAAAAAGAAAAACAGAAGGATGGCAATTATAAGTGTCACCTAAAATACAAACAGAGATCCATGGAACGTAAAAATGCAATTGTTTTATGTGCAAGGCCAGGTGGGGTGGGGGGGGGTTGGTTTGTGACAACTGACACTAGTGATCTTTTTAAGCCAAAGCAAAAACTGTAACATGTGTATATAATCTGATAATCAAGCCATATCAGAAGCCATTTCTAAATCAATGGTCCATACACAAAGCCAATCTTTATGTTCTTTCATTCAACTTATATACAGAAAATCAAAATTGTTACATCAGAATATATTCTTAGATAAGATGAGTCCGTGGCACTTGATTCAACACTTCATTTAAAATTAATCCTCTCATCCTCCACATTTCATCCCGGACAAATCATTTGAAATAACCTTGTTGACAGTCATCTTGCAACGTGTATGTACATAAATTAACGAAATAGTTAATTATATATGATGATTGATTCTCAGGATATGACAACAATCTTGCTTGTTAAAGTCAGTAAAGACCTGGATGACACATTGACCCTGATATTAAACACAAAGTCGTTTCAAGTAGTAGGGGTGTTTATATACTTGAAGAACATGAATTGTATAAGAATTAAAACCAAATGTTCAAATCAATAGAAAACTGATCTTATGTGAGATAAATACGTTCAACAAGAAGGGATTATTAAAACATACCTAAGCAGATAGGACATTGAACTTCTCTCCGAATGTCTGACAATTTCACGGCGATAAATCTGGAAAAGAAAACCAGACAGAAGATTTAGGATGTCGGAATAATCGCAAGACACCTAAGATCGTGTTAATCGTTCAAGGAATTCTACTGTTCACCATGCAACTAACGAACCGATAAACAACTTTCTGTTCAGACAAATATATTCCATAACGCAACCCAAATAGTTCGTTCATCGCGATAGCGTAAGAGTACCGCTCAAGTTGTCAAAAATTTTGGTAAAATTGTTCTTAATGAAATGTCGCGTTTCCAGTCGTTAACTTCTTGGAATTTGCGTAAAATTGGATCCGACAATCAATGGCGGGAACCAGCAAGATTTCTCAGTGAACGCTTCAGTTATAGTAAGCTTGATTCCACGTTTAGTGAAAGCTTGATCTCGGATCATGTGAGCTTTAACATCGTAGAGAAGCTAAAACCATGTGAGCTCCAACGTCATTACCCACCCAGCAGCTCGTTGCATATGTAAAAACAGATTGATCGCGTATACGACCTCGAGAACCCACTTCGCCCACAAGATCCAGCACCCAATTCCACTAACCATAATCGGAAAAGAAACTCAAAACTTGAAAGTAAAGAAAACTCCGGTGCAGGACAAAAATCGACGAATGCCTTAGCACGTGAAGCCTACACAGCAGGTCTTCGAATACGGTCGCAGCAAGACCTTAAGGAACAATACCACGAAGCATACCATGCAGATCCCAAATCAATCCCAAGCAGTTAA

mRNA sequence

ATGTTGGTTCCGGAGGTTGAAGGATTGAGTTTCATTTGCAGCTCTTTTGTCACGCACATTTCAACAACATCAACTGAAAGCTCAGTTTCGAGAGCAACGTGTCCAATCGTCACTGAAGGCCTGCAGCAAATATATGGTCTTTGCAATGCGGGTATTCTAGTTTCATCGATGGAAACGAGCACAAGCACCATCTGCTCCGTCGGCTCCAGTAGCTGTAGAAGACTGAGAAAATCGAACAGGACCACCTCTCCTGGATCTTTTAGGTCTAGTGTCCATTCGCTCATCAGCAGAAGAAGAATTTTTGCTGGCATCATAATCATTTTCGTCCTCACTCTCAATATGATTTTGAAAGCTTTTGCGTCCTCTAGAACTCAATCTCCTCGAAGGTTTAGAACGTTTCCTACCCAAAGCTTCAGTTTGCCGTTGAAGTGTCTGAGCAATGGAAGTTTGAATCTGCAAGATAAACAGAAAACATGGCAAAATCTGTGGTTTTTTGTAATCGAACAATGTAAAGTAAGCTCATCAACTCTGGAAAACAAACAAATTCGTGTCAATAGTGATAAATATGCACAGAACTTGGCCTTCTCACCTGCTTATTACGAGCTTTCTCTTCTTCTTGAAAAGCCAAGAGCGTCGACTGGCACAATGAGTGCGGCAAGCAGGGCACTCATTGTTACTGCAGCAAATTTCAGTAAAAGTTTAGAGGAAGCCAGAAGGAAACAATTAGCAAGATCAAGAACATATTATTACATAAGAGCATACCCTAGACGCATTGATTTGTCTATGCATTCCCTGCAAAAGCGGTGCAGACATTCCATCACAGTTCTGGATATGACAACAATCTTGCTTGTTAAAGTCAGTAAAGACCTGGATGACACATTGACCCTGATATTAAACACAAAGTCGTTTCAAGTAGTAGGGCGTAAGAGTACCGCTCAAGTTGTCAAAAATTTTGGTAAAATTGTTCTTAATGAAATGTCGCGTTTCCAGTCGTTAACTTCTTGGAATTTGCGTAAAATTGGATCCGACAATCAATGGCGGGAACCAGCAAGATTTCTCAGTGAACGCTTCAGTTATAGTAAGCTTGATTCCACGTTTAGTGAAAGCTTGATCTCGGATCATATTGATCGCGTATACGACCTCGAGAACCCACTTCGCCCACAAGATCCAGCACCCAATTCCACTAACCATAATCGGAAAAGAAACTCAAAACTTGAAAGTAAAGAAAACTCCGGTGCAGGACAAAAATCGACGAATGCCTTAGCACGTGAAGCCTACACAGCAGGTCTTCGAATACGGTCGCAGCAAGACCTTAAGGAACAATACCACGAAGCATACCATGCAGATCCCAAATCAATCCCAAGCAGTTAA

Coding sequence (CDS)

ATGTTGGTTCCGGAGGTTGAAGGATTGAGTTTCATTTGCAGCTCTTTTGTCACGCACATTTCAACAACATCAACTGAAAGCTCAGTTTCGAGAGCAACGTGTCCAATCGTCACTGAAGGCCTGCAGCAAATATATGGTCTTTGCAATGCGGGTATTCTAGTTTCATCGATGGAAACGAGCACAAGCACCATCTGCTCCGTCGGCTCCAGTAGCTGTAGAAGACTGAGAAAATCGAACAGGACCACCTCTCCTGGATCTTTTAGGTCTAGTGTCCATTCGCTCATCAGCAGAAGAAGAATTTTTGCTGGCATCATAATCATTTTCGTCCTCACTCTCAATATGATTTTGAAAGCTTTTGCGTCCTCTAGAACTCAATCTCCTCGAAGGTTTAGAACGTTTCCTACCCAAAGCTTCAGTTTGCCGTTGAAGTGTCTGAGCAATGGAAGTTTGAATCTGCAAGATAAACAGAAAACATGGCAAAATCTGTGGTTTTTTGTAATCGAACAATGTAAAGTAAGCTCATCAACTCTGGAAAACAAACAAATTCGTGTCAATAGTGATAAATATGCACAGAACTTGGCCTTCTCACCTGCTTATTACGAGCTTTCTCTTCTTCTTGAAAAGCCAAGAGCGTCGACTGGCACAATGAGTGCGGCAAGCAGGGCACTCATTGTTACTGCAGCAAATTTCAGTAAAAGTTTAGAGGAAGCCAGAAGGAAACAATTAGCAAGATCAAGAACATATTATTACATAAGAGCATACCCTAGACGCATTGATTTGTCTATGCATTCCCTGCAAAAGCGGTGCAGACATTCCATCACAGTTCTGGATATGACAACAATCTTGCTTGTTAAAGTCAGTAAAGACCTGGATGACACATTGACCCTGATATTAAACACAAAGTCGTTTCAAGTAGTAGGGCGTAAGAGTACCGCTCAAGTTGTCAAAAATTTTGGTAAAATTGTTCTTAATGAAATGTCGCGTTTCCAGTCGTTAACTTCTTGGAATTTGCGTAAAATTGGATCCGACAATCAATGGCGGGAACCAGCAAGATTTCTCAGTGAACGCTTCAGTTATAGTAAGCTTGATTCCACGTTTAGTGAAAGCTTGATCTCGGATCATATTGATCGCGTATACGACCTCGAGAACCCACTTCGCCCACAAGATCCAGCACCCAATTCCACTAACCATAATCGGAAAAGAAACTCAAAACTTGAAAGTAAAGAAAACTCCGGTGCAGGACAAAAATCGACGAATGCCTTAGCACGTGAAGCCTACACAGCAGGTCTTCGAATACGGTCGCAGCAAGACCTTAAGGAACAATACCACGAAGCATACCATGCAGATCCCAAATCAATCCCAAGCAGTTAA

Protein sequence

MLVPEVEGLSFICSSFVTHISTTSTESSVSRATCPIVTEGLQQIYGLCNAGILVSSMETSTSTICSVGSSSCRRLRKSNRTTSPGSFRSSVHSLISRRRIFAGIIIIFVLTLNMILKAFASSRTQSPRRFRTFPTQSFSLPLKCLSNGSLNLQDKQKTWQNLWFFVIEQCKVSSSTLENKQIRVNSDKYAQNLAFSPAYYELSLLLEKPRASTGTMSAASRALIVTAANFSKSLEEARRKQLARSRTYYYIRAYPRRIDLSMHSLQKRCRHSITVLDMTTILLVKVSKDLDDTLTLILNTKSFQVVGRKSTAQVVKNFGKIVLNEMSRFQSLTSWNLRKIGSDNQWREPARFLSERFSYSKLDSTFSESLISDHIDRVYDLENPLRPQDPAPNSTNHNRKRNSKLESKENSGAGQKSTNALAREAYTAGLRIRSQQDLKEQYHEAYHADPKSIPSS
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 382..422
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 408..422
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 164..234
score: 7.0524

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC04G077910.1CcUC04G077910.1mRNA