Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTATTAGAAAGAATGATGAAGAGGCATCTGTTGCTGTTCATTCCTCCATTGCTTTACTTCAAGAGAGATTCAGACAACTACAGAAAATGAAGGAGATGAGAGAAGAAAGAGAGTTTGTGAAATTGCTATCTCTTTCTCAATCCCCGAAAACACATAGCTGCTGCAGCTTCTTCTTCAACAATACAAATACTTGTGTGCTTTTTGAGCCCTCAATTTCACATCCTCATCATGAGTTAATGATGATGAAGAAGAAGAAGAAGGAGGTAGAACCAACAATCTTAACATTGCTGCCTCAAACATCTCTATCTCTCTCCTTAACTTCTTCAAATGATCAACCCAACAATAATATCCCAACTTTGATGGACTTATGGCCACTGCCTCATACTACTACTACTAGTCCTACAACTTCTTGTGATAGTGCCATCTCTTTCATTACTAAACTAAATGATCATGAATACTCTGACTCTGATACCGGTGTTGATACTTCTCTTCACTTGTAA
mRNA sequence
ATGGGTATTAGAAAGAATGATGAAGAGGCATCTGTTGCTGTTCATTCCTCCATTGCTTTACTTCAAGAGAGATTCAGACAACTACAGAAAATGAAGGAGATGAGAGAAGAAAGAGAGTTTGTGAAATTGCTATCTCTTTCTCAATCCCCGAAAACACATAGCTGCTGCAGCTTCTTCTTCAACAATACAAATACTTGTGTGCTTTTTGAGCCCTCAATTTCACATCCTCATCATGAGTTAATGATGATGAAGAAGAAGAAGAAGGAGGTAGAACCAACAATCTTAACATTGCTGCCTCAAACATCTCTATCTCTCTCCTTAACTTCTTCAAATGATCAACCCAACAATAATATCCCAACTTTGATGGACTTATGGCCACTGCCTCATACTACTACTACTAGTCCTACAACTTCTTGTGATAGTGCCATCTCTTTCATTACTAAACTAAATGATCATGAATACTCTGACTCTGATACCGGTGTTGATACTTCTCTTCACTTGTAA
Coding sequence (CDS)
ATGGGTATTAGAAAGAATGATGAAGAGGCATCTGTTGCTGTTCATTCCTCCATTGCTTTACTTCAAGAGAGATTCAGACAACTACAGAAAATGAAGGAGATGAGAGAAGAAAGAGAGTTTGTGAAATTGCTATCTCTTTCTCAATCCCCGAAAACACATAGCTGCTGCAGCTTCTTCTTCAACAATACAAATACTTGTGTGCTTTTTGAGCCCTCAATTTCACATCCTCATCATGAGTTAATGATGATGAAGAAGAAGAAGAAGGAGGTAGAACCAACAATCTTAACATTGCTGCCTCAAACATCTCTATCTCTCTCCTTAACTTCTTCAAATGATCAACCCAACAATAATATCCCAACTTTGATGGACTTATGGCCACTGCCTCATACTACTACTACTAGTCCTACAACTTCTTGTGATAGTGCCATCTCTTTCATTACTAAACTAAATGATCATGAATACTCTGACTCTGATACCGGTGTTGATACTTCTCTTCACTTGTAA
Protein sequence
MGIRKNDEEASVAVHSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFNNTNTCVLFEPSISHPHHELMMMKKKKKEVEPTILTLLPQTSLSLSLTSSNDQPNNNIPTLMDLWPLPHTTTTSPTTSCDSAISFITKLNDHEYSDSDTGVDTSLHL
Homology
BLAST of CcUC04G075860 vs. NCBI nr
Match:
TYK12991.1 (hypothetical protein E5676_scaffold255G005880 [Cucumis melo var. makuwa])
HSP 1 Score: 218.0 bits (554), Expect = 6.1e-53
Identity = 131/189 (69.31%), Postives = 149/189 (78.84%), Query Frame = 0
Query: 3 IRKNDEEASVAVH-SSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFN 62
IRK+++EASV VH SSIALLQERFRQLQK+KEMREERE VKLLSLSQ PKTHSCCSFFFN
Sbjct: 6 IRKDNQEASVVVHSSSIALLQERFRQLQKVKEMREEREVVKLLSLSQYPKTHSCCSFFFN 65
Query: 63 ----NTNTCVLFEPSISH--PHHELMMMKKKKK-----EVEPTILTLLPQTSLSLSLTSS 122
NTNTCV+FEPSIS+ PHHELMM KKKK T+LTLLPQTSLSLSLT+S
Sbjct: 66 NTNTNTNTCVVFEPSISNSSPHHELMMTMKKKKVPSSSSSTTTMLTLLPQTSLSLSLTTS 125
Query: 123 ND-----QPNNNIPTLMDLWPLPHTTTTSPTTSCDSAISFITKLNDHE-------YSDSD 168
+ Q +NNIPTLMDLWP+P +T+T+ ++SCDSAISFI+KLNDH+ Y DSD
Sbjct: 126 SSHDHDHQQSNNIPTLMDLWPVPSSTSTT-SSSCDSAISFISKLNDHDHHDRDHHYFDSD 185
BLAST of CcUC04G075860 vs. NCBI nr
Match:
KGN49044.1 (hypothetical protein Csa_002770 [Cucumis sativus])
HSP 1 Score: 213.4 bits (542), Expect = 1.5e-51
Identity = 132/191 (69.11%), Postives = 146/191 (76.44%), Query Frame = 0
Query: 3 IRK-NDEEASVAVH-SSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFF 62
IRK N E ASV +H SSIALLQERFRQLQK+KEMREE+E VKLLSLSQ PKTH+CCSFFF
Sbjct: 6 IRKDNQEAASVLLHSSSIALLQERFRQLQKVKEMREEKEVVKLLSLSQYPKTHTCCSFFF 65
Query: 63 NN-----TNTCVLFEPSIS--HPHHELMMMKKKKK-----EVEPTILTLLPQTSLSLSLT 122
NN TNTCV+FEPSIS +PHHELMM KKKK T+LTLLPQTSLSLSLT
Sbjct: 66 NNTNTNSTNTCVVFEPSISNNNPHHELMMTMKKKKVPSSSSTTTTMLTLLPQTSLSLSLT 125
Query: 123 SSND-----QPNNNIPTLMDLWPLPHTTTTSPTTSCDSAISFITKLNDHE-------YSD 168
SS+ Q +NNIPTLMDLWP+P ++TS T+SCDSAISFITKLNDH+ Y D
Sbjct: 126 SSSSHDHDHQQSNNIPTLMDLWPVP-ASSTSTTSSCDSAISFITKLNDHDHHDHDHHYFD 185
BLAST of CcUC04G075860 vs. NCBI nr
Match:
KAG6594702.1 (hypothetical protein SDJN03_11255, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 127.9 bits (320), Expect = 8.3e-26
Identity = 87/173 (50.29%), Postives = 110/173 (63.58%), Query Frame = 0
Query: 1 MGIRKNDEEASVAVHSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFF 60
MG +++ S+ V SSIALLQERFRQLQK+KEMREERE V+LLSLS +PK H
Sbjct: 1 MGTHQSNHHPSLVVQSSIALLQERFRQLQKVKEMREERELVRLLSLS-NPKKHGL----- 60
Query: 61 NNTNTCVLFEPSISHPHHELMMMKKKKKEVEPTILTLLPQTSLSLSLTSSNDQP------ 120
NTCVLFEPS++ +M+ + T + LPQTSLSL TS +
Sbjct: 61 --FNTCVLFEPSVA---TMMMLPTTTTTTMTATKMLTLPQTSLSLWPTSPSPGKKLTVGV 120
Query: 121 NNNIPTLMDLWPLPHTTTTSPTTSCDSAISFITKLNDHEYSDSDTGVDTSLHL 168
+ ++P LM+LWP+ + TTS ++SCDSAIS I+KL SDSD VDTSLHL
Sbjct: 121 DVDVPALMNLWPV-DSVTTSTSSSCDSAISLISKLEHDHESDSDIDVDTSLHL 161
BLAST of CcUC04G075860 vs. NCBI nr
Match:
XP_015878993.1 (uncharacterized protein LOC107415217 [Ziziphus jujuba])
HSP 1 Score: 83.6 bits (205), Expect = 1.8e-12
Identity = 69/169 (40.83%), Postives = 92/169 (54.44%), Query Frame = 0
Query: 12 VAVHSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFNNTNTCVLFEP 71
+A+HSSIALLQERFRQLQ+MKEMRE +E +++L + + + S N N + FEP
Sbjct: 9 IAIHSSIALLQERFRQLQRMKEMREGKELIRMLVVEPNKQKQSDI-----NLNPTLYFEP 68
Query: 72 SISHPHHELMMMKKKKKEVEPTILTLLPQTSLSLSLTSSNDQPNNNI------------- 131
S P+ + + P I + Q SLSL N + N NI
Sbjct: 69 PKSFPNPDFL---------TPQIRPISQQDSLSL---WQNLRSNMNIEDFRGIEISCCVP 128
Query: 132 PTLMDLWPLPHTTTTSPTTSCDSAISFITKLNDHEYSDSDTGVDTSLHL 168
PTLM+LWP+ T ++S +S S+ S I K D SDSD+ VDTSLHL
Sbjct: 129 PTLMNLWPVNDTPSSSNASS--SSSSNIYKFED---SDSDSDVDTSLHL 155
BLAST of CcUC04G075860 vs. NCBI nr
Match:
KAF3451851.1 (hypothetical protein FNV43_RR07947 [Rhamnella rubrinervis])
HSP 1 Score: 79.0 bits (193), Expect = 4.4e-11
Identity = 59/161 (36.65%), Postives = 95/161 (59.01%), Query Frame = 0
Query: 9 EASVAVHSSIALLQERFRQLQKMKEMREEREFV-KLLSLSQSPKTHSCCSFFFNNTNTCV 68
E VHSSIALLQERFRQLQ+MKEMREE+E + ++L++++S H + + +
Sbjct: 7 ECPSVVHSSIALLQERFRQLQRMKEMREEKELINRMLAVAESNNKH----YLNIHVKPTM 66
Query: 69 LFEPSISHPH-HELMMMKKKKKEVEPTILTLLPQTSLSLSLTSSNDQPNNNIPTLMDLWP 128
FEP+ P + ++ + ++ + + S+ S SS +P LM+LWP
Sbjct: 67 YFEPACLFPKPQRAIQVQPQNQDSVSQWQSNVEYRSVESSSISSCTRP------LMNLWP 126
Query: 129 LPHTTTTSPTTSCDSAISFITKLNDHEYSDSDTGVDTSLHL 168
+ + T P++S D+++SF +KL++ DS++ VDTSLHL
Sbjct: 127 IDYDT---PSSSSDASLSF-SKLSEEYLCDSESDVDTSLHL 153
BLAST of CcUC04G075860 vs. ExPASy TrEMBL
Match:
A0A5D3CME5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005880 PE=4 SV=1)
HSP 1 Score: 218.0 bits (554), Expect = 3.0e-53
Identity = 131/189 (69.31%), Postives = 149/189 (78.84%), Query Frame = 0
Query: 3 IRKNDEEASVAVH-SSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFN 62
IRK+++EASV VH SSIALLQERFRQLQK+KEMREERE VKLLSLSQ PKTHSCCSFFFN
Sbjct: 6 IRKDNQEASVVVHSSSIALLQERFRQLQKVKEMREEREVVKLLSLSQYPKTHSCCSFFFN 65
Query: 63 ----NTNTCVLFEPSISH--PHHELMMMKKKKK-----EVEPTILTLLPQTSLSLSLTSS 122
NTNTCV+FEPSIS+ PHHELMM KKKK T+LTLLPQTSLSLSLT+S
Sbjct: 66 NTNTNTNTCVVFEPSISNSSPHHELMMTMKKKKVPSSSSSTTTMLTLLPQTSLSLSLTTS 125
Query: 123 ND-----QPNNNIPTLMDLWPLPHTTTTSPTTSCDSAISFITKLNDHE-------YSDSD 168
+ Q +NNIPTLMDLWP+P +T+T+ ++SCDSAISFI+KLNDH+ Y DSD
Sbjct: 126 SSHDHDHQQSNNIPTLMDLWPVPSSTSTT-SSSCDSAISFISKLNDHDHHDRDHHYFDSD 185
BLAST of CcUC04G075860 vs. ExPASy TrEMBL
Match:
A0A0A0KJS5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511110 PE=4 SV=1)
HSP 1 Score: 213.4 bits (542), Expect = 7.3e-52
Identity = 132/191 (69.11%), Postives = 146/191 (76.44%), Query Frame = 0
Query: 3 IRK-NDEEASVAVH-SSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFF 62
IRK N E ASV +H SSIALLQERFRQLQK+KEMREE+E VKLLSLSQ PKTH+CCSFFF
Sbjct: 6 IRKDNQEAASVLLHSSSIALLQERFRQLQKVKEMREEKEVVKLLSLSQYPKTHTCCSFFF 65
Query: 63 NN-----TNTCVLFEPSIS--HPHHELMMMKKKKK-----EVEPTILTLLPQTSLSLSLT 122
NN TNTCV+FEPSIS +PHHELMM KKKK T+LTLLPQTSLSLSLT
Sbjct: 66 NNTNTNSTNTCVVFEPSISNNNPHHELMMTMKKKKVPSSSSTTTTMLTLLPQTSLSLSLT 125
Query: 123 SSND-----QPNNNIPTLMDLWPLPHTTTTSPTTSCDSAISFITKLNDHE-------YSD 168
SS+ Q +NNIPTLMDLWP+P ++TS T+SCDSAISFITKLNDH+ Y D
Sbjct: 126 SSSSHDHDHQQSNNIPTLMDLWPVP-ASSTSTTSSCDSAISFITKLNDHDHHDHDHHYFD 185
BLAST of CcUC04G075860 vs. ExPASy TrEMBL
Match:
A0A6P3ZU56 (uncharacterized protein LOC107415217 OS=Ziziphus jujuba OX=326968 GN=LOC107415217 PE=4 SV=1)
HSP 1 Score: 83.6 bits (205), Expect = 8.7e-13
Identity = 69/169 (40.83%), Postives = 92/169 (54.44%), Query Frame = 0
Query: 12 VAVHSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFNNTNTCVLFEP 71
+A+HSSIALLQERFRQLQ+MKEMRE +E +++L + + + S N N + FEP
Sbjct: 9 IAIHSSIALLQERFRQLQRMKEMREGKELIRMLVVEPNKQKQSDI-----NLNPTLYFEP 68
Query: 72 SISHPHHELMMMKKKKKEVEPTILTLLPQTSLSLSLTSSNDQPNNNI------------- 131
S P+ + + P I + Q SLSL N + N NI
Sbjct: 69 PKSFPNPDFL---------TPQIRPISQQDSLSL---WQNLRSNMNIEDFRGIEISCCVP 128
Query: 132 PTLMDLWPLPHTTTTSPTTSCDSAISFITKLNDHEYSDSDTGVDTSLHL 168
PTLM+LWP+ T ++S +S S+ S I K D SDSD+ VDTSLHL
Sbjct: 129 PTLMNLWPVNDTPSSSNASS--SSSSNIYKFED---SDSDSDVDTSLHL 155
BLAST of CcUC04G075860 vs. ExPASy TrEMBL
Match:
W9SFE8 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000264 PE=4 SV=1)
HSP 1 Score: 76.3 bits (186), Expect = 1.4e-10
Identity = 66/175 (37.71%), Postives = 93/175 (53.14%), Query Frame = 0
Query: 4 RKNDEEASVAVHSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFNNT 63
R+ ++ VHSSIALLQERFRQLQ++KE+REERE +++LS ++ + N T
Sbjct: 3 REIHDQTHAVVHSSIALLQERFRQLQRVKEVREERELLRILSEHNINNNNNLMN---NPT 62
Query: 64 NTC----VLFEPSISHPHHELMMMKKKKKEVEPTI-LTLLPQTSLSLSLTSSNDQ----- 123
C ++F H HH L+ + + P + L+L P +L S ++S DQ
Sbjct: 63 MICEPSRLVFHSDHHHHHHHLIFPQIRSSPSAPQVSLSLWP--ALQCSSSASEDQYYCSS 122
Query: 124 PNNNIPTL-MDLWPLPHTTTTSPTTSCDSAISFITKLNDHEYSDSDTGVDTSLHL 168
N+ P L M LWPL T + + S S + DH+YSD VDTSLHL
Sbjct: 123 INDQTPLLMMKLWPL-DTHAPAEFSEASSDKSHLDSDPDHDYSD----VDTSLHL 167
BLAST of CcUC04G075860 vs. ExPASy TrEMBL
Match:
W9QDY3 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_010582 PE=4 SV=1)
HSP 1 Score: 76.3 bits (186), Expect = 1.4e-10
Identity = 66/175 (37.71%), Postives = 93/175 (53.14%), Query Frame = 0
Query: 4 RKNDEEASVAVHSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFNNT 63
R+ ++ VHSSIALLQERFRQLQ++KE+REERE +++LS ++ + N T
Sbjct: 3 REIHDQTHAVVHSSIALLQERFRQLQRVKEVREERELLRILSEHNINNNNNLMN---NPT 62
Query: 64 NTC----VLFEPSISHPHHELMMMKKKKKEVEPTI-LTLLPQTSLSLSLTSSNDQ----- 123
C ++F H HH L+ + + P + L+L P +L S ++S DQ
Sbjct: 63 MICEPLRLVFHSDHHHHHHHLIFPQIRSSPSAPQVSLSLWP--ALQCSSSASEDQYYCSS 122
Query: 124 PNNNIPTL-MDLWPLPHTTTTSPTTSCDSAISFITKLNDHEYSDSDTGVDTSLHL 168
N+ P L M LWPL T + + S S + DH+YSD VDTSLHL
Sbjct: 123 INDQTPLLMMKLWPL-DTHAPAEFSEASSDKSHLDSDPDHDYSD----VDTSLHL 167
BLAST of CcUC04G075860 vs. TAIR 10
Match:
AT4G16447.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 43.5 bits (101), Expect = 1.9e-04
Identity = 20/35 (57.14%), Postives = 27/35 (77.14%), Query Frame = 0
Query: 7 DEEASVAVHSSIALLQERFRQLQKMKEMREEREFV 42
D + + +HSSI LLQERFRQLQ+ +E+R ERE +
Sbjct: 7 DRKEQMVIHSSIVLLQERFRQLQRARELRAERELL 41
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK12991.1 | 6.1e-53 | 69.31 | hypothetical protein E5676_scaffold255G005880 [Cucumis melo var. makuwa] | [more] |
KGN49044.1 | 1.5e-51 | 69.11 | hypothetical protein Csa_002770 [Cucumis sativus] | [more] |
KAG6594702.1 | 8.3e-26 | 50.29 | hypothetical protein SDJN03_11255, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_015878993.1 | 1.8e-12 | 40.83 | uncharacterized protein LOC107415217 [Ziziphus jujuba] | [more] |
KAF3451851.1 | 4.4e-11 | 36.65 | hypothetical protein FNV43_RR07947 [Rhamnella rubrinervis] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3CME5 | 3.0e-53 | 69.31 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0KJS5 | 7.3e-52 | 69.11 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511110 PE=4 SV=1 | [more] |
A0A6P3ZU56 | 8.7e-13 | 40.83 | uncharacterized protein LOC107415217 OS=Ziziphus jujuba OX=326968 GN=LOC10741521... | [more] |
W9SFE8 | 1.4e-10 | 37.71 | Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000264 PE=4 SV=1 | [more] |
W9QDY3 | 1.4e-10 | 37.71 | Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_010582 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G16447.1 | 1.9e-04 | 57.14 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... | [more] |