CcUC04G075290 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC04G075290
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	endochitinase-like
Location	CicolChr04: 30951999 .. 30952629 (+)
RNA-Seq Expression	CcUC04G075290
Synteny	CcUC04G075290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACTAACTTATGCATTCATCTTCTTATCTTTTGCTTTGTTATTTTTGGGAGGCGCTGCCGAGCAATGTGGGCGGCAGGCCGGCGGCGCTCTTTGCCCGAACGGGCTGTGTTGCAGCCAATTTGGGTGGTGTGGCACCGCGGATGCCTACTGTGGAGCGGGCTGCCAAAGCCGATGTCGTCGTTCAAACCCGACTCCGACGCCTACCCATGGCGGAGGTGACATCGGTAGGCTAATCAACCAAAACACTTTCAACCAAATGCTTAAGTATAGTAAAGATCCAAGATGCCCCAGCAATGGCTTCTATAGCTACGTTGCTTTTCTTAGCGCTGCTCAATCCTTTAGTGGCTTTGCTACAACTGGAGATGATGCCACTCGTAAAAGGGAGTTGGCCGCTTTCTTTGGCCAAACTTCTCACGAAACTAACGGTTAGTTTTTCGTCTATTTAAATAGATTAGATATCCGTTTGAATTTAGAACTCTAATAAACATGAGTATCATCTCTAATTGATCATGTCCTCTTAAGATGTTGTCTCTTTGAGTTCATCATTTTTTAATCGGATAACATATGGTACAGGAGGATGGCCAACCGCACCCAATGATCCATATGCATGGGATATTGTTTCATAA

mRNA sequence

ATGAAACTAACTTATGCATTCATCTTCTTATCTTTTGCTTTGTTATTTTTGGGAGGCGCTGCCGAGCAATGTGGGCGGCAGGCCGGCGGCGCTCTTTGCCCGAACGGGCTGTGTTGCAGCCAATTTGGGTGGTGTGGCACCGCGGATGCCTACTGTGGAGCGGGCTGCCAAAGCCGATGTCGTCGTTCAAACCCGACTCCGACGCCTACCCATGGCGGAGGTGACATCGGTAGGCTAATCAACCAAAACACTTTCAACCAAATGCTTAAGTATAGTAAAGATCCAAGATGCCCCAGCAATGGCTTCTATAGCTACGTTGCTTTTCTTAGCGCTGCTCAATCCTTTAGTGGCTTTGCTACAACTGGAGATGATGCCACTCGTAAAAGGGAGTTGGCCGCTTTCTTTGGCCAAACTTCTCACGAAACTAACGGAGGATGGCCAACCGCACCCAATGATCCATATGCATGGGATATTGTTTCATAA

Coding sequence (CDS)

ATGAAACTAACTTATGCATTCATCTTCTTATCTTTTGCTTTGTTATTTTTGGGAGGCGCTGCCGAGCAATGTGGGCGGCAGGCCGGCGGCGCTCTTTGCCCGAACGGGCTGTGTTGCAGCCAATTTGGGTGGTGTGGCACCGCGGATGCCTACTGTGGAGCGGGCTGCCAAAGCCGATGTCGTCGTTCAAACCCGACTCCGACGCCTACCCATGGCGGAGGTGACATCGGTAGGCTAATCAACCAAAACACTTTCAACCAAATGCTTAAGTATAGTAAAGATCCAAGATGCCCCAGCAATGGCTTCTATAGCTACGTTGCTTTTCTTAGCGCTGCTCAATCCTTTAGTGGCTTTGCTACAACTGGAGATGATGCCACTCGTAAAAGGGAGTTGGCCGCTTTCTTTGGCCAAACTTCTCACGAAACTAACGGAGGATGGCCAACCGCACCCAATGATCCATATGCATGGGATATTGTTTCATAA

Protein sequence

MKLTYAFIFLSFALLFLGGAAEQCGRQAGGALCPNGLCCSQFGWCGTADAYCGAGCQSRCRRSNPTPTPTHGGGDIGRLINQNTFNQMLKYSKDPRCPSNGFYSYVAFLSAAQSFSGFATTGDDATRKRELAAFFGQTSHETNGGWPTAPNDPYAWDIVS

Homology

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BLAST of CcUC04G075290 vs. NCBI nr
Match: XP_038882616.1 (LOW QUALITY PROTEIN: endochitinase A-like [Benincasa hispida])

HSP 1 Score: 275.8 bits (704), Expect = 2.4e-70
Identity = 133/161 (82.61%), Postives = 141/161 (87.58%), Query Frame = 0


Query: 1   MKLTYA-FIFLSFALLFLGGAAEQCGRQAGGALCPNGLCCSQFGWCGTADAYCGAGCQSR 60
           MK  YA  IFLSFALL LGG+AEQCGR AGGA+CP GLCCSQFGWCGT+DAYCG GCQSR
Sbjct: 1   MKKIYALLIFLSFALLLLGGSAEQCGRXAGGAVCPIGLCCSQFGWCGTSDAYCGPGCQSR 60

Query: 61  CRRSNPT----PTPTHGGGDIGRLINQNTFNQMLKYSKDPRCPSNGFYSYVAFLSAAQSF 120
           CRR+NPT    PTPT GGGDI RLIN+  FNQMLKYS DPRCPSNGFYSY AFL+AAQ F
Sbjct: 61  CRRTNPTPMPKPTPTRGGGDISRLINREAFNQMLKYSNDPRCPSNGFYSYDAFLNAAQFF 120

Query: 121 SGFATTGDDATRKRELAAFFGQTSHETNGGWPTAPNDPYAW 157
           SGFATTGDDATRKRELAAFFGQTSHET+GGWPTAP+ PYAW
Sbjct: 121 SGFATTGDDATRKRELAAFFGQTSHETSGGWPTAPDGPYAW 161

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BLAST of CcUC04G075290 vs. NCBI nr
Match: XP_022949793.1 (endochitinase-like [Cucurbita moschata])

HSP 1 Score: 264.6 bits (675), Expect = 5.5e-67
Identity = 123/152 (80.92%), Postives = 132/152 (86.84%), Query Frame = 0


Query: 5   YAFIFLSFALLFLGGAAEQCGRQAGGALCPNGLCCSQFGWCGTADAYCGAGCQSRCRRSN 64
           YA IFL F LL LG +AEQCGRQA GA+CPNGLCCSQFGWCGT  AYCG GCQSRCRRSN
Sbjct: 4   YALIFLLFPLLLLGASAEQCGRQASGAVCPNGLCCSQFGWCGTTRAYCGHGCQSRCRRSN 63

Query: 65  PTPTPTHGGGDIGRLINQNTFNQMLKYSKDPRCPSNGFYSYVAFLSAAQSFSGFATTGDD 124
           PTP+P   GG+I RLI+  TF+QMLKY  DPRCPSNGFYSY AFL+AA+SFSGFATTGDD
Sbjct: 64  PTPSPNGSGGNIARLISSATFDQMLKYRNDPRCPSNGFYSYDAFLAAARSFSGFATTGDD 123

Query: 125 ATRKRELAAFFGQTSHETNGGWPTAPNDPYAW 157
           ATRKRELAAFFGQTSHET GGWPTAP+ PYAW
Sbjct: 124 ATRKRELAAFFGQTSHETTGGWPTAPDGPYAW 155

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BLAST of CcUC04G075290 vs. NCBI nr
Match: XP_023544981.1 (endochitinase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.4 bits (664), Expect = 1.0e-65
Identity = 122/153 (79.74%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 5   YAFIFLSF-ALLFLGGAAEQCGRQAGGALCPNGLCCSQFGWCGTADAYCGAGCQSRCRRS 64
           YA IFL F  LL LG +AEQCGRQAGG +CPNGLCCSQFGWCGT  AYCG GCQSRCRRS
Sbjct: 4   YALIFLLFPLLLLLGASAEQCGRQAGGVVCPNGLCCSQFGWCGTTRAYCGHGCQSRCRRS 63

Query: 65  NPTPTPTHGGGDIGRLINQNTFNQMLKYSKDPRCPSNGFYSYVAFLSAAQSFSGFATTGD 124
           NPTP+P   GG++ RLI+  TF+QMLKY  DPRCPSNGFYSY AFL+AA+SFSGFATTGD
Sbjct: 64  NPTPSPNGSGGNVARLISSATFDQMLKYRNDPRCPSNGFYSYDAFLAAARSFSGFATTGD 123

Query: 125 DATRKRELAAFFGQTSHETNGGWPTAPNDPYAW 157
           DATRKRELAAFFGQTSHET GGWPTAP+ PYAW
Sbjct: 124 DATRKRELAAFFGQTSHETTGGWPTAPDGPYAW 156

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BLAST of CcUC04G075290 vs. NCBI nr
Match: KAG6603866.1 (hypothetical protein SDJN03_04475, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 259.2 bits (661), Expect = 2.3e-65
Identity = 123/153 (80.39%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 5   YAFIFLSF-ALLFLGGAAEQCGRQAGGALCPNGLCCSQFGWCGTADAYCGAGCQSRCRRS 64
           YA IFL F  LL LG +AEQCGRQA GA+CPNGLCCSQFGWCGT  AYCG GCQSRCRRS
Sbjct: 4   YALIFLLFPLLLLLGTSAEQCGRQASGAVCPNGLCCSQFGWCGTTRAYCGHGCQSRCRRS 63

Query: 65  NPTPTPTHGGGDIGRLINQNTFNQMLKYSKDPRCPSNGFYSYVAFLSAAQSFSGFATTGD 124
           NPTP+P   GG+I RLI+  TF+QMLKY  DPRCPSNGFYSY AFL+AA+SFSGFATTGD
Sbjct: 64  NPTPSPNGSGGNIARLISSATFDQMLKYRNDPRCPSNGFYSYDAFLAAARSFSGFATTGD 123

Query: 125 DATRKRELAAFFGQTSHETNGGWPTAPNDPYAW 157
           DATRKRELAAFFGQTSHET GGWPTAP+ PYAW
Sbjct: 124 DATRKRELAAFFGQTSHETTGGWPTAPDGPYAW 156

[Close]

BLAST of CcUC04G075290 vs. NCBI nr
Match: XP_022977304.1 (endochitinase-like [Cucurbita maxima])

HSP 1 Score: 251.9 bits (642), Expect = 3.7e-63
Identity = 120/153 (78.43%), Postives = 129/153 (84.31%), Query Frame = 0


Query: 5   YAFIFLSFAL-LFLGGAAEQCGRQAGGALCPNGLCCSQFGWCGTADAYCGAGCQSRCRRS 64
           YA IFL F L L LG +AEQCGRQA GA+CPNGLCCSQFGWCGT  AYCG GCQSRCR S
Sbjct: 4   YALIFLLFPLSLLLGASAEQCGRQASGAVCPNGLCCSQFGWCGTTRAYCGHGCQSRCRYS 63

Query: 65  NPTPTPTHGGGDIGRLINQNTFNQMLKYSKDPRCPSNGFYSYVAFLSAAQSFSGFATTGD 124
           NPTP+P   GG+I RLI+  TF+QMLKY  DPRCPSNGFYSY AFL+AA+SFSGFATTGD
Sbjct: 64  NPTPSPNGSGGNIARLISSATFDQMLKYRNDPRCPSNGFYSYDAFLAAARSFSGFATTGD 123

Query: 125 DATRKRELAAFFGQTSHETNGGWPTAPNDPYAW 157
           DAT KRELAAF GQTSHET GGWPTAP+ PYAW
Sbjct: 124 DATCKRELAAFLGQTSHETTGGWPTAPDGPYAW 156

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BLAST of CcUC04G075290 vs. ExPASy Swiss-Prot
Match: P36907 (Endochitinase OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 2.9e-55
Identity = 101/156 (64.74%), Postives = 122/156 (78.21%), Query Frame = 0


Query: 3   LTYAFIFLSFALLFLGGAAEQCGRQAGGALCPNGLCCSQFGWCGTADAYCGAGCQSRCRR 62
           L  +F  L    LFLG  AEQCG QAGGA+CPNGLCCS+FG+CG+ D YCG GCQS+C+ 
Sbjct: 5   LKVSFFILCLLPLFLGSKAEQCGSQAGGAVCPNGLCCSKFGFCGSTDPYCGDGCQSQCKS 64

Query: 63  S-NPT-PTPTHGGGDIGRLINQNTFNQMLKYSKDPRCPSNGFYSYVAFLSAAQSFSGFAT 122
           S  PT PTP+ GGGD+GRL+  + F+QMLKY  D RC  +GFY+Y AF++AA+SF+GF T
Sbjct: 65  SPTPTIPTPSTGGGDVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGT 124

Query: 123 TGDDATRKRELAAFFGQTSHETNGGWPTAPNDPYAW 157
           TGDD T+K+ELAAF  QTSHET GGWPTAP+ PYAW
Sbjct: 125 TGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAW 160

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BLAST of CcUC04G075290 vs. ExPASy Swiss-Prot
Match: P19171 (Basic endochitinase B OS=Arabidopsis thaliana OX=3702 GN=CHI-B PE=1 SV=3)

HSP 1 Score: 198.0 bits (502), Expect = 8.2e-50
Identity = 93/154 (60.39%), Postives = 114/154 (74.03%), Query Frame = 0


Query: 4   TYAFIFLSFALLFLGGAAEQCGRQAGGALCPNGLCCSQFGWCGTADAYC-GAGCQSRCRR 63
           T  F+FL F+LL    +AEQCGRQAGGALCPNGLCCS+FGWCG  + YC   GCQS+C  
Sbjct: 16  TNLFLFLIFSLLLSLSSAEQCGRQAGGALCPNGLCCSEFGWCGNTEPYCKQPGCQSQCTP 75

Query: 64  SNPTPTPTHGGGDIGRLINQNTFNQMLKYSKDPRCPSNGFYSYVAFLSAAQSFSGFATTG 123
               P PT   GD+  +I+ + F+ MLK+  D  CP+ GFY+Y AF++AA+SF GF TTG
Sbjct: 76  GGTPPGPT---GDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTG 135

Query: 124 DDATRKRELAAFFGQTSHETNGGWPTAPNDPYAW 157
           D ATRK+E+AAFFGQTSHET GGW TAP+ PY+W
Sbjct: 136 DTATRKKEVAAFFGQTSHETTGGWATAPDGPYSW 166

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BLAST of CcUC04G075290 vs. ExPASy Swiss-Prot
Match: Q09023 (Endochitinase CH25 OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 9.1e-49
Identity = 91/150 (60.67%), Postives = 113/150 (75.33%), Query Frame = 0


Query: 8   IFLSFALLFLGGAAEQCGRQAGGALCPNGLCCSQFGWCGTADAYC-GAGCQSRCRRSNPT 67
           +FL F+ L     AEQCGRQAGGALCPNGLCCS+FGWCG  +AYC   GCQS+C  + P 
Sbjct: 7   LFLIFSFLLSFSLAEQCGRQAGGALCPNGLCCSEFGWCGDTEAYCKQPGCQSQCGGTPPG 66

Query: 68  PTPTHGGGDIGRLINQNTFNQMLKYSKDPRCPSNGFYSYVAFLSAAQSFSGFATTGDDAT 127
           PT     GD+  +I+++ F+ MLK+  D  CP+ GFY+Y AF++AA+SF GF TTGD AT
Sbjct: 67  PT-----GDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTAT 126

Query: 128 RKRELAAFFGQTSHETNGGWPTAPNDPYAW 157
           RK+E+AAFFGQTSHET GGW TAP+ PY+W
Sbjct: 127 RKKEIAAFFGQTSHETTGGWATAPDGPYSW 151

[Close]

BLAST of CcUC04G075290 vs. ExPASy Swiss-Prot
Match: P08252 (Endochitinase A OS=Nicotiana tabacum OX=4097 GN=CHN48 PE=1 SV=2)

HSP 1 Score: 194.1 bits (492), Expect = 1.2e-48
Identity = 93/150 (62.00%), Postives = 111/150 (74.00%), Query Frame = 0


Query: 10  LSFALLFLGGAAEQCGRQAGGALCPNGLCCSQFGWCGTADAYCGAG-CQSRCRRSNPTPT 69
           L F+LL L  +AEQCG QAGGA CP+GLCCS+FGWCG  + YCG G CQS+C    PTPT
Sbjct: 12  LLFSLLLLSASAEQCGSQAGGARCPSGLCCSKFGWCGNTNDYCGPGNCQSQC-PGGPTPT 71

Query: 70  P--THGGGDIGRLINQNTFNQMLKYSKDPRCPSNGFYSYVAFLSAAQSFSGFATTGDDAT 129
           P    GGGD+G +I+ + F+QMLK+  D  C   GFYSY AF++AA+SF GF T+GD   
Sbjct: 72  PPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTA 131

Query: 130 RKRELAAFFGQTSHETNGGWPTAPNDPYAW 157
           RKRE+AAFF QTSHET GGW TAP+ PYAW
Sbjct: 132 RKREIAAFFAQTSHETTGGWATAPDGPYAW 160

[Close]

BLAST of CcUC04G075290 vs. ExPASy Swiss-Prot
Match: P06215 (Endochitinase OS=Phaseolus vulgaris OX=3885 PE=1 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.3e-47
Identity = 89/144 (61.81%), Postives = 109/144 (75.69%), Query Frame = 0


Query: 14  LLFLGGA-AEQCGRQAGGALCPNGLCCSQFGWCGTADAYCGAGCQSRCRRSNPTPTPTHG 73
           LL +GG+  EQCGRQAGGALCP G CCSQFGWCG+   YCG GCQS+C    P+P PT  
Sbjct: 19  LLLVGGSYGEQCGRQAGGALCPGGNCCSQFGWCGSTTDYCGPGCQSQC--GGPSPAPT-- 78

Query: 74  GGDIGRLINQNTFNQMLKYSKDPRCPSNGFYSYVAFLSAAQSFSGFATTGDDATRKRELA 133
             D+  LI+++TF+QMLK+  D  CP+ GFY+Y AF++AA+++  F  TGD ATRKRE+A
Sbjct: 79  --DLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIA 138

Query: 134 AFFGQTSHETNGGWPTAPNDPYAW 157
           AF GQTSHET GGW TAP+ PYAW
Sbjct: 139 AFLGQTSHETTGGWATAPDGPYAW 156

[Close]

BLAST of CcUC04G075290 vs. ExPASy TrEMBL
Match: A0A6J1GD36 (endochitinase-like OS=Cucurbita moschata OX=3662 GN=LOC111453083 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.6e-67
Identity = 123/152 (80.92%), Postives = 132/152 (86.84%), Query Frame = 0


Query: 5   YAFIFLSFALLFLGGAAEQCGRQAGGALCPNGLCCSQFGWCGTADAYCGAGCQSRCRRSN 64
           YA IFL F LL LG +AEQCGRQA GA+CPNGLCCSQFGWCGT  AYCG GCQSRCRRSN
Sbjct: 4   YALIFLLFPLLLLGASAEQCGRQASGAVCPNGLCCSQFGWCGTTRAYCGHGCQSRCRRSN 63

Query: 65  PTPTPTHGGGDIGRLINQNTFNQMLKYSKDPRCPSNGFYSYVAFLSAAQSFSGFATTGDD 124
           PTP+P   GG+I RLI+  TF+QMLKY  DPRCPSNGFYSY AFL+AA+SFSGFATTGDD
Sbjct: 64  PTPSPNGSGGNIARLISSATFDQMLKYRNDPRCPSNGFYSYDAFLAAARSFSGFATTGDD 123

Query: 125 ATRKRELAAFFGQTSHETNGGWPTAPNDPYAW 157
           ATRKRELAAFFGQTSHET GGWPTAP+ PYAW
Sbjct: 124 ATRKRELAAFFGQTSHETTGGWPTAPDGPYAW 155

[Close]

BLAST of CcUC04G075290 vs. ExPASy TrEMBL
Match: A0A6J1IR09 (endochitinase-like OS=Cucurbita maxima OX=3661 GN=LOC111477666 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.8e-63
Identity = 120/153 (78.43%), Postives = 129/153 (84.31%), Query Frame = 0


Query: 5   YAFIFLSFAL-LFLGGAAEQCGRQAGGALCPNGLCCSQFGWCGTADAYCGAGCQSRCRRS 64
           YA IFL F L L LG +AEQCGRQA GA+CPNGLCCSQFGWCGT  AYCG GCQSRCR S
Sbjct: 4   YALIFLLFPLSLLLGASAEQCGRQASGAVCPNGLCCSQFGWCGTTRAYCGHGCQSRCRYS 63

Query: 65  NPTPTPTHGGGDIGRLINQNTFNQMLKYSKDPRCPSNGFYSYVAFLSAAQSFSGFATTGD 124
           NPTP+P   GG+I RLI+  TF+QMLKY  DPRCPSNGFYSY AFL+AA+SFSGFATTGD
Sbjct: 64  NPTPSPNGSGGNIARLISSATFDQMLKYRNDPRCPSNGFYSYDAFLAAARSFSGFATTGD 123

Query: 125 DATRKRELAAFFGQTSHETNGGWPTAPNDPYAW 157
           DAT KRELAAF GQTSHET GGWPTAP+ PYAW
Sbjct: 124 DATCKRELAAFLGQTSHETTGGWPTAPDGPYAW 156

[Close]

BLAST of CcUC04G075290 vs. ExPASy TrEMBL
Match: A0A5D3CKZ6 (Endochitinase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00690 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.0e-63
Identity = 123/161 (76.40%), Postives = 135/161 (83.85%), Query Frame = 0


Query: 1   MKLTYA-FIFLSFALLFLGGAAEQCGRQAGGALCPNGLCCSQFGWCGTADAYCGAGCQSR 60
           MK  YA  IFLSFALL  GG+AEQCG QAGGA+CPNGLCCSQ+GWCGT +AYCGAGCQS+
Sbjct: 1   MKNVYAIIIFLSFALLLFGGSAEQCGWQAGGAVCPNGLCCSQYGWCGTVNAYCGAGCQSQ 60

Query: 61  CRRSNPTPTPTHGGGD----IGRLINQNTFNQMLKYSKDPRCPSNGFYSYVAFLSAAQSF 120
           CRR + TP P  GGG     IGRLI ++TFNQM KYS DPRCPSNGFYSY AFL+AAQSF
Sbjct: 61  CRRRS-TPAPIRGGGGGGGYIGRLIREDTFNQMFKYSNDPRCPSNGFYSYRAFLTAAQSF 120

Query: 121 SGFATTGDDATRKRELAAFFGQTSHETNGGWPTAPNDPYAW 157
           +GFATTGD+ATRKRELAAFFGQTS ET GGW TAP+ PYAW
Sbjct: 121 NGFATTGDEATRKRELAAFFGQTSQETTGGWATAPDGPYAW 160

[Close]

BLAST of CcUC04G075290 vs. ExPASy TrEMBL
Match: A0A1S3B272 (endochitinase-like OS=Cucumis melo OX=3656 GN=LOC103485185 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.0e-63
Identity = 123/161 (76.40%), Postives = 135/161 (83.85%), Query Frame = 0


Query: 1   MKLTYA-FIFLSFALLFLGGAAEQCGRQAGGALCPNGLCCSQFGWCGTADAYCGAGCQSR 60
           MK  YA  IFLSFALL  GG+AEQCG QAGGA+CPNGLCCSQ+GWCGT +AYCGAGCQS+
Sbjct: 6   MKNVYAIIIFLSFALLLFGGSAEQCGWQAGGAVCPNGLCCSQYGWCGTVNAYCGAGCQSQ 65

Query: 61  CRRSNPTPTPTHGGGD----IGRLINQNTFNQMLKYSKDPRCPSNGFYSYVAFLSAAQSF 120
           CRR + TP P  GGG     IGRLI ++TFNQM KYS DPRCPSNGFYSY AFL+AAQSF
Sbjct: 66  CRRRS-TPAPIRGGGGGGGYIGRLIREDTFNQMFKYSNDPRCPSNGFYSYRAFLTAAQSF 125

Query: 121 SGFATTGDDATRKRELAAFFGQTSHETNGGWPTAPNDPYAW 157
           +GFATTGD+ATRKRELAAFFGQTS ET GGW TAP+ PYAW
Sbjct: 126 NGFATTGDEATRKRELAAFFGQTSQETTGGWATAPDGPYAW 165

[Close]

BLAST of CcUC04G075290 vs. ExPASy TrEMBL
Match: A0A6J1GD14 (endochitinase-like OS=Cucurbita moschata OX=3662 GN=LOC111453081 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.1e-57
Identity = 111/156 (71.15%), Postives = 126/156 (80.77%), Query Frame = 0


Query: 1   MKLTYAFIFLSFALLFLGGAAEQCGRQAGGALCPNGLCCSQFGWCGTADAYCGAGCQSRC 60
           MKL +  I L+FA + LGGAAEQCGRQA GALCPNGLCCSQFGWCG  D YC  GCQS+C
Sbjct: 8   MKL-HTLIVLAFAFV-LGGAAEQCGRQANGALCPNGLCCSQFGWCGDTDEYCKDGCQSQC 67

Query: 61  RRSNPTPTPTHGGGDIGRLINQNTFNQMLKYSKDPRCPSNGFYSYVAFLSAAQSFSGFAT 120
             S P+  P+ GG  +G +I+++ +NQMLKYSKDPRCPSNGFY Y AF++AAQSF GF T
Sbjct: 68  GGSTPSTPPSSGGSGVGSIISESLYNQMLKYSKDPRCPSNGFYRYNAFVTAAQSFPGFGT 127

Query: 121 TGDDATRKRELAAFFGQTSHETNGGWPTAPNDPYAW 157
           TGD ATRKRELAAFFGQTSHET GGW TAP+ PYAW
Sbjct: 128 TGDAATRKRELAAFFGQTSHETTGGWATAPDGPYAW 161

[Close]

BLAST of CcUC04G075290 vs. TAIR 10
Match: AT3G12500.1 (basic chitinase )

HSP 1 Score: 198.0 bits (502), Expect = 5.9e-51
Identity = 93/154 (60.39%), Postives = 114/154 (74.03%), Query Frame = 0


Query: 4   TYAFIFLSFALLFLGGAAEQCGRQAGGALCPNGLCCSQFGWCGTADAYC-GAGCQSRCRR 63
           T  F+FL F+LL    +AEQCGRQAGGALCPNGLCCS+FGWCG  + YC   GCQS+C  
Sbjct: 16  TNLFLFLIFSLLLSLSSAEQCGRQAGGALCPNGLCCSEFGWCGNTEPYCKQPGCQSQCTP 75

Query: 64  SNPTPTPTHGGGDIGRLINQNTFNQMLKYSKDPRCPSNGFYSYVAFLSAAQSFSGFATTG 123
               P PT   GD+  +I+ + F+ MLK+  D  CP+ GFY+Y AF++AA+SF GF TTG
Sbjct: 76  GGTPPGPT---GDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTG 135

Query: 124 DDATRKRELAAFFGQTSHETNGGWPTAPNDPYAW 157
           D ATRK+E+AAFFGQTSHET GGW TAP+ PY+W
Sbjct: 136 DTATRKKEVAAFFGQTSHETTGGWATAPDGPYSW 166

[Close]

BLAST of CcUC04G075290 vs. TAIR 10
Match: AT2G43610.1 (Chitinase family protein )

HSP 1 Score: 92.0 bits (227), Expect = 4.5e-19
Identity = 58/151 (38.41%), Postives = 76/151 (50.33%), Query Frame = 0


Query: 3   LTYAFIFLSFALLFLGGAA--EQCGRQAGGALCPNGLCCSQFGWCGTADAYCGAGCQSRC 62
           L  A I   F L  + G A  + CG       C   +CCS++G+CGT  AYCG GCQS  
Sbjct: 8   LKKALIIFLFTLTIMTGTAFSQNCGTNG----CKGNMCCSRWGYCGTTKAYCGTGCQSGP 67

Query: 63  RRSNPTPTPTHGG---------GDIGRLINQNTFNQMLKYSKDPRCPSNGFYSYVAFLSA 122
             S P PTPT  G         G I  +I    FN ++       CP+ GFY+  AF++A
Sbjct: 68  CNSKPKPTPTPSGSGGLNAGPRGTIASVITPAFFNSIMS-KVGSGCPAKGFYTRQAFIAA 127

Query: 123 AQSFSGFATTGDDATRKRELAAFFGQTSHET 143
           A+SF+ +  T      KRE+AA   Q SHE+
Sbjct: 128 AESFAAYKGT----VAKREIAAMLAQFSHES 149

[Close]

BLAST of CcUC04G075290 vs. TAIR 10
Match: AT1G02360.1 (Chitinase family protein )

HSP 1 Score: 87.8 bits (216), Expect = 8.5e-18
Identity = 36/83 (43.37%), Postives = 55/83 (66.27%), Query Frame = 0


Query: 76  IGRLINQNTFNQMLKYSKDPRCPSNGFYSYVAFLSAAQSFSGFATTGDDATRKRELAAFF 135
           I RL+ ++ +N++  +  +  CP+NGFY+Y +F+ A + F  F + G   T++ E+AAF 
Sbjct: 30  IERLVPRDLYNKIFIHKDNTACPANGFYTYESFVQATRRFPRFGSVGSPVTQRLEVAAFL 89

Query: 136 GQTSHETNGGWPTAPNDPYAWDI 159
            Q SHET GGW TAP+ PYAW +
Sbjct: 90  AQISHETTGGWATAPDGPYAWGL 112

[Close]

BLAST of CcUC04G075290 vs. TAIR 10
Match: AT2G43590.1 (Chitinase family protein )

HSP 1 Score: 86.3 bits (212), Expect = 2.5e-17
Identity = 53/140 (37.86%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 3   LTYAFIFLSFALLFLGGAAEQCGRQAGGALCPNGLCCSQFGWCGTADAYCGAGCQSRCRR 62
           + +  I L   L  LG  +E    Q  G  C   LCCSQFG+CGT DAYCG GC+S   R
Sbjct: 1   MAFTKISLVLLLCLLGFFSETVKSQNCG--CAPNLCCSQFGYCGTDDAYCGVGCRSGPCR 60

Query: 63  SNPTPTPTHGGGDIGRLINQNTFNQMLKYSKDPRCPSNGFYSYVAFLSAAQSFSGFATTG 122
            + TPT    GG +G ++ Q  FN ++  + +  C    FY+  +F++AA +F  FA   
Sbjct: 61  GSGTPT----GGSVGSIVTQGFFNNIINQAGN-GCAGKRFYTRDSFVNAANTFPNFA--- 120

Query: 123 DDATRKRELAAFFGQTSHET 143
            ++  +RE+A  F   +HET
Sbjct: 121 -NSVTRREIATMFAHFTHET 129

[Close]

BLAST of CcUC04G075290 vs. TAIR 10
Match: AT4G01700.1 (Chitinase family protein )

HSP 1 Score: 86.3 bits (212), Expect = 2.5e-17
Identity = 37/80 (46.25%), Postives = 53/80 (66.25%), Query Frame = 0


Query: 79  LINQNTFNQMLKYSKDPRCPSNGFYSYVAFLSAAQSFSGFATTGDDATRKRELAAFFGQT 138
           L+ +  ++Q+  +  +  CP+ GFY Y AF+ A +SF  F + G+  TR+RE+AAF  Q 
Sbjct: 41  LVPRTLYDQIFIHKDNNACPAKGFYPYEAFVEATRSFPKFGSVGNFWTRRREVAAFLAQI 100

Query: 139 SHETNGGWPTAPNDPYAWDI 159
           SHET GGW TAP+ PYAW +
Sbjct: 101 SHETTGGWATAPDGPYAWGL 120

The following BLAST results are available for this feature:

BLAST of CcUC04G075290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882616.1	2.4e-70	82.61	LOW QUALITY PROTEIN: endochitinase A-like [Benincasa hispida]	[more]
XP_022949793.1	5.5e-67	80.92	endochitinase-like [Cucurbita moschata]	[more]
XP_023544981.1	1.0e-65	79.74	endochitinase-like [Cucurbita pepo subsp. pepo]	[more]
KAG6603866.1	2.3e-65	80.39	hypothetical protein SDJN03_04475, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022977304.1	3.7e-63	78.43	endochitinase-like [Cucurbita maxima]	[more]

BLAST of CcUC04G075290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P36907	2.9e-55	64.74	Endochitinase OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
P19171	8.2e-50	60.39	Basic endochitinase B OS=Arabidopsis thaliana OX=3702 GN=CHI-B PE=1 SV=3	[more]
Q09023	9.1e-49	60.67	Endochitinase CH25 OS=Brassica napus OX=3708 PE=2 SV=1	[more]
P08252	1.2e-48	62.00	Endochitinase A OS=Nicotiana tabacum OX=4097 GN=CHN48 PE=1 SV=2	[more]
P06215	1.3e-47	61.81	Endochitinase OS=Phaseolus vulgaris OX=3885 PE=1 SV=1	[more]

BLAST of CcUC04G075290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GD36	2.6e-67	80.92	endochitinase-like OS=Cucurbita moschata OX=3662 GN=LOC111453083 PE=4 SV=1	[more]
A0A6J1IR09	1.8e-63	78.43	endochitinase-like OS=Cucurbita maxima OX=3661 GN=LOC111477666 PE=4 SV=1	[more]
A0A5D3CKZ6	3.0e-63	76.40	Endochitinase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G0...	[more]
A0A1S3B272	3.0e-63	76.40	endochitinase-like OS=Cucumis melo OX=3656 GN=LOC103485185 PE=4 SV=1	[more]
A0A6J1GD14	1.1e-57	71.15	endochitinase-like OS=Cucurbita moschata OX=3662 GN=LOC111453081 PE=4 SV=1	[more]

BLAST of CcUC04G075290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12500.1	5.9e-51	60.39	basic chitinase	[more]
AT2G43610.1	4.5e-19	38.41	Chitinase family protein	[more]
AT1G02360.1	8.5e-18	43.37	Chitinase family protein	[more]
AT2G43590.1	2.5e-17	37.86	Chitinase family protein	[more]
AT4G01700.1	2.5e-17	46.25	Chitinase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001002	Chitin-binding, type 1	PRINTS	PR00451	CHITINBINDNG	coord: 31..39 score: 69.78 coord: 39..46 score: 80.67 coord: 46..53 score: 56.0
IPR001002	Chitin-binding, type 1	SMART	SM00270	ChitinBD_3	coord: 23..60 e-value: 2.6E-17 score: 73.5
IPR001002	Chitin-binding, type 1	PFAM	PF00187	Chitin_bind_1	coord: 23..60 e-value: 1.3E-14 score: 54.3
IPR001002	Chitin-binding, type 1	PROSITE	PS50941	CHIT_BIND_I_2	coord: 21..62 score: 11.074783
IPR000726	Glycoside hydrolase, family 19, catalytic	PFAM	PF00182	Glyco_hydro_19	coord: 79..157 e-value: 2.2E-31 score: 109.4
IPR000726	Glycoside hydrolase, family 19, catalytic	PROSITE	PS00773	CHITINASE_19_1	coord: 97..119
IPR036861	Endochitinase-like superfamily	GENE3D	3.30.60.10		coord: 21..62 e-value: 2.4E-18 score: 68.0
IPR036861	Endochitinase-like superfamily	SUPERFAMILY	57016	Plant lectins/antimicrobial peptides	coord: 23..69
None	No IPR available	GENE3D	1.10.530.10		coord: 63..160 e-value: 2.6E-37 score: 130.5
None	No IPR available	PANTHER	PTHR22595	CHITINASE-RELATED	coord: 7..157
None	No IPR available	PANTHER	PTHR22595:SF171	CHITINASE (CLASS IB) / HEVEIN	coord: 7..157
None	No IPR available	CDD	cd06921	ChtBD1_GH19_hevein	coord: 22..60 e-value: 6.48338E-19 score: 73.2924
None	No IPR available	CDD	cd00325	chitinase_GH19	coord: 84..156 e-value: 1.15531E-21 score: 85.1743
IPR018371	Chitin-binding, type 1, conserved site	PROSITE	PS00026	CHIT_BIND_I_1	coord: 33..52
IPR023346	Lysozyme-like domain superfamily	SUPERFAMILY	53955	Lysozyme-like	coord: 75..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC04G075290.1	CcUC04G075290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0016998	cell wall macromolecule catabolic process
biological_process	GO:0006032	chitin catabolic process
biological_process	GO:0006952	defense response
molecular_function	GO:0004568	chitinase activity
molecular_function	GO:0008061	chitin binding