CcUC04G075110 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC04G075110
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	DUF1990 domain-containing protein
Location	CicolChr04: 30873889 .. 30875637 (+)
RNA-Seq Expression	CcUC04G075110
Synteny	CcUC04G075110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTTCTTGTGTTGGTCTCGCCCATCTCCTCAGGAACAGAAAGCCTGCATTGAAAGGCAAGAACGATGGGATTGTAATCACTCTCATTCATATAGGTTTGTTTCGATTTTTCTAAGTGGAATGTTACATGATGTACATCAATAGGGCTGGTTCCTTCAATTATAGCAGCAAGTTTAGAGGAGCTACTGCTAATCCAAGTTCTTGCCTGCAAGAAGATAAGGGGATCTCACAAGAAGGTTTTCTTCTCAACCATGCTCGTATTTTGGTGGGTTCTGGTGTTGAGACTTATGAAAAGGGGAAGAAAGCTCTTCAGAACTGGAGGTTGGGTTTATACTTTTTGTTTGAAGTGTAACCTATTGGAAGAATCTTTAATCCATCCCAAATTTTGTAGGCATTTTGGATTGAATTGGGCATTTGTTGATTCCTCGACTCCAGTTCATTCAGGAGTGAAGTTTTGTGTCTGTGCCAAGGAGTTCCTTCCATGGGTGGTGATGCCTCTTCAAATTGTATATGTAAATGAGAATAGAGATAGCAATATGGCTACGACTTGTTTCAGTTTTGGCAGTGGTACTCTTCAAGGCCATCTTCTGGTTAGTTGTTTTTTCTTTATTTTCCCCCCCTTTTTTTTCTCCCTCATTTGCTTGTTAGCTTACCTACAGACTACTTATCTTGCAAAGAATCAGCCATAGTTGTGAAATAAGAGTTCGTATTTCATGCAATTATAGCTCAATGGTGTGATTCTAAATTGTTTTTATCAACGTCTTGCCTTGACGACTTGGATGTATACTCAATTGAATTCTACATTTGATTTCATATAGTCATCGATTTCCTATCTTGAGAAGTACGAATGCAGATGTAACACAACACAAATACAGTGGCACGATATATTTTTAAAATCTATGACATAGACACAACAAGGACATGTTGATTAAAATATACATTTTTATAAATATATATCATATTTATACAAGGAGGAAATTCAAGATCATTGAGTTTATGCACTTATATGTTTAAAAAATTAGTTTGATGTATTATTGATGCATGTCTAACAAATATTGAACCTACTTTGACTTTGTACAACTAGTGCCTAACACATCTATTGCACAAACAAGTTTCCAATAAGTGTCAGATACAGATGCTAGCCAAATTAGAGGGTCCGTGCTTTTAAGATTGTTTCTCTAAGAGATTAAGTATCAACTTGTGTAAATTTAGCCCATGCACACTAAAGTATCAAGTCTTCGACTAAGTTTCTCTCTTTAAACATATGTAAGAGAAGCAGAGACTTCTATCAAGAACAACACCCCAGTCTGTCCCCAATATTCTTAAATACTTCACTCATACTATCTGCATCTTCTCAGATAGCATAGTCCACTCATTTCTCCCAAGCTTTTTTTTTTTTTCTTTTTTTTTTGTCTTCTCTAATTTCTGTTGTTGCTTTTCTCTATAGTCTATACTTGTAATTAATGTACTTGATAGCCCAGGTTTTCTTTAATCTCACCTTGGATCCTATAAATGGCAAATTTGAGTAATATGATCTGAAGTTCTGACAAATTTCAGGCCGGTGAAGAACGATTTTCAATAGAGATGGACTCGAACAGGCAGGTGTGGTATGAAATTCTTTCCTTCTCAAAGCCTGCCCACATATTATCATTCCTTAGTTATCCCTACGTAATTCTTCGGCAAAAGTATTTTGCTTATCAATCTACAAATGCAGTTAAGAAATATTTGACCGCCAGTCGTTCCTAA

mRNA sequence

ATGGTGTTCTTGTGTTGGTCTCGCCCATCTCCTCAGGAACAGAAAGCCTGCATTGAAAGGGCTGGTTCCTTCAATTATAGCAGCAAGTTTAGAGGAGCTACTGCTAATCCAAGTTCTTGCCTGCAAGAAGATAAGGGGATCTCACAAGAAGGTTTTCTTCTCAACCATGCTCGTATTTTGGTGGGTTCTGGTGTTGAGACTTATGAAAAGGGGAAGAAAGCTCTTCAGAACTGGAGGCATTTTGGATTGAATTGGGCATTTGTTGATTCCTCGACTCCAGTTCATTCAGGAGTGAAGTTTTGTGTCTGTGCCAAGGAGTTCCTTCCATGGGTGGTGATGCCTCTTCAAATTGTATATGTAAATGAGAATAGAGATAGCAATATGGCTACGACTTGTTTCAGTTTTGGCAGTGGTACTCTTCAAGGCCATCTTCTGGCCGGTGAAGAACGATTTTCAATAGAGATGGACTCGAACAGGCAGGTGTGGTATGAAATTCTTTCCTTCTCAAAGCCTGCCCACATATTATCATTCCTTAGTTATCCCTACGTAATTCTTCGGCAAAAGTATTTTGCTTATCAATCTACAAATGCAGTTAAGAAATATTTGACCGCCAGTCGTTCCTAA

Coding sequence (CDS)

ATGGTGTTCTTGTGTTGGTCTCGCCCATCTCCTCAGGAACAGAAAGCCTGCATTGAAAGGGCTGGTTCCTTCAATTATAGCAGCAAGTTTAGAGGAGCTACTGCTAATCCAAGTTCTTGCCTGCAAGAAGATAAGGGGATCTCACAAGAAGGTTTTCTTCTCAACCATGCTCGTATTTTGGTGGGTTCTGGTGTTGAGACTTATGAAAAGGGGAAGAAAGCTCTTCAGAACTGGAGGCATTTTGGATTGAATTGGGCATTTGTTGATTCCTCGACTCCAGTTCATTCAGGAGTGAAGTTTTGTGTCTGTGCCAAGGAGTTCCTTCCATGGGTGGTGATGCCTCTTCAAATTGTATATGTAAATGAGAATAGAGATAGCAATATGGCTACGACTTGTTTCAGTTTTGGCAGTGGTACTCTTCAAGGCCATCTTCTGGCCGGTGAAGAACGATTTTCAATAGAGATGGACTCGAACAGGCAGGTGTGGTATGAAATTCTTTCCTTCTCAAAGCCTGCCCACATATTATCATTCCTTAGTTATCCCTACGTAATTCTTCGGCAAAAGTATTTTGCTTATCAATCTACAAATGCAGTTAAGAAATATTTGACCGCCAGTCGTTCCTAA

Protein sequence

MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARILVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHSGVKFCVCAKEFLPWVVMPLQIVYVNENRDSNMATTCFSFGSGTLQGHLLAGEERFSIEMDSNRQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKKYLTASRS

Homology

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BLAST of CcUC04G075110 vs. NCBI nr
Match: XP_022950650.1 (UPF0548 protein At2g17695 [Cucurbita moschata] >XP_023543885.1 UPF0548 protein At2g17695 [Cucurbita pepo subsp. pepo] >XP_023543886.1 UPF0548 protein At2g17695 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 413.3 bits (1061), Expect = 1.2e-111
Identity = 196/207 (94.69%), Postives = 200/207 (96.62%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60
           MVFLCWSRPSPQEQK CI+R+GSFNYSSKFRGATANPSSCLQEDKG+SQEGFLLNHARIL
Sbjct: 1   MVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARIL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHSGVKFCVCAKEFLPWVVMPLQIVYV 120
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVH GVKFCVCAKEFLPWVVMPLQIVYV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYV 120

Query: 121 NENRDSNMATTCFSFGSGTLQGHLLAGEERFSIEMDSNRQVWYEILSFSKPAHILSFLSY 180
           NENR +NMA TCFSFGSGTLQGHLLAGEERFSIEMDSN QVWYEILSFSKPAHILSFLSY
Sbjct: 121 NENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSY 180

Query: 181 PYVILRQKYFAYQSTNAVKKYLTASRS 208
           PYVILRQKYFAYQSTNAVKKYLTA  S
Sbjct: 181 PYVILRQKYFAYQSTNAVKKYLTAKHS 207

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BLAST of CcUC04G075110 vs. NCBI nr
Match: XP_022979037.1 (UPF0548 protein At2g17695 [Cucurbita maxima])

HSP 1 Score: 412.9 bits (1060), Expect = 1.6e-111
Identity = 195/207 (94.20%), Postives = 200/207 (96.62%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60
           MVFLCWSRPSPQEQK CI+R+GSFNYSSKFRGATANPSSCLQEDKG+SQEGFLLNHARIL
Sbjct: 1   MVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARIL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHSGVKFCVCAKEFLPWVVMPLQIVYV 120
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVH GVKFCVCAKEFLPWVVMPLQIVYV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYV 120

Query: 121 NENRDSNMATTCFSFGSGTLQGHLLAGEERFSIEMDSNRQVWYEILSFSKPAHILSFLSY 180
           NENR +NMA TCFSFGSGTLQGHLLAGEERFSIEMDSN QVWYEILSFSKPAHILSFLSY
Sbjct: 121 NENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSY 180

Query: 181 PYVILRQKYFAYQSTNAVKKYLTASRS 208
           PY+ILRQKYFAYQSTNAVKKYLTA  S
Sbjct: 181 PYIILRQKYFAYQSTNAVKKYLTAKHS 207

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BLAST of CcUC04G075110 vs. NCBI nr
Match: XP_038883220.1 (UPF0548 protein At2g17695 isoform X1 [Benincasa hispida] >XP_038883221.1 UPF0548 protein At2g17695 isoform X1 [Benincasa hispida])

HSP 1 Score: 406.8 bits (1044), Expect = 1.2e-109
Identity = 193/207 (93.24%), Postives = 199/207 (96.14%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60
           MVFLCWSRPSPQ+QKACIERAGSFNYSSKFRGATANPS+CLQED GISQEGFLLNHARIL
Sbjct: 1   MVFLCWSRPSPQDQKACIERAGSFNYSSKFRGATANPSTCLQEDNGISQEGFLLNHARIL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHSGVKFCVCAKEFLPWVVMPLQIVYV 120
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVH GVKFCVCAKEFLPWVV+PLQIVYV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYV 120

Query: 121 NENRDSNMATTCFSFGSGTLQGHLLAGEERFSIEMDSNRQVWYEILSFSKPAHILSFLSY 180
           NENRD+  A TCFSFGSGTL GHLLAGEERFSIEMDSN QVWYEILSFSKPAHILSFLSY
Sbjct: 121 NENRDTKKAGTCFSFGSGTLHGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSY 180

Query: 181 PYVILRQKYFAYQSTNAVKKYLTASRS 208
           PYVILRQKYFA+QSTNAVKKYLTA+ S
Sbjct: 181 PYVILRQKYFAHQSTNAVKKYLTATHS 207

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BLAST of CcUC04G075110 vs. NCBI nr
Match: XP_008440884.1 (PREDICTED: UPF0548 protein At2g17695 [Cucumis melo] >XP_008440885.1 PREDICTED: UPF0548 protein At2g17695 [Cucumis melo])

HSP 1 Score: 406.0 bits (1042), Expect = 2.0e-109
Identity = 193/207 (93.24%), Postives = 198/207 (95.65%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60
           MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL
Sbjct: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHSGVKFCVCAKEFLPWVVMPLQIVYV 120
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVH GVKFCVCAKEFLPWVV+PLQIVYV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYV 120

Query: 121 NENRDSNMATTCFSFGSGTLQGHLLAGEERFSIEMDSNRQVWYEILSFSKPAHILSFLSY 180
           NENR++N   TCFSFGSGTLQGHLLAGEERFSIEMDSN QVWYEILS SKPAHILSFLSY
Sbjct: 121 NENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSISKPAHILSFLSY 180

Query: 181 PYVILRQKYFAYQSTNAVKKYLTASRS 208
           PYVILRQKYFA+QSTNA KKYLT + S
Sbjct: 181 PYVILRQKYFAHQSTNAFKKYLTPTHS 207

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BLAST of CcUC04G075110 vs. NCBI nr
Match: XP_004134836.1 (UPF0548 protein At2g17695 isoform X1 [Cucumis sativus] >KGN48967.1 hypothetical protein Csa_003747 [Cucumis sativus])

HSP 1 Score: 403.3 bits (1035), Expect = 1.3e-108
Identity = 193/208 (92.79%), Postives = 199/208 (95.67%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDK-GISQEGFLLNHARI 60
           MVFLCWSRPSPQEQKACIERAGSFNY+SKFRGATANPSSCLQEDK GISQEGFLLNHARI
Sbjct: 1   MVFLCWSRPSPQEQKACIERAGSFNYNSKFRGATANPSSCLQEDKGGISQEGFLLNHARI 60

Query: 61  LVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHSGVKFCVCAKEFLPWVVMPLQIVY 120
           LVGSGV TYEKGKKALQNWRHFGLNWAFVDSSTPVH GVKFCVCAKEFLPWVV+PLQIVY
Sbjct: 61  LVGSGVGTYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVY 120

Query: 121 VNENRDSNMATTCFSFGSGTLQGHLLAGEERFSIEMDSNRQVWYEILSFSKPAHILSFLS 180
           VNENRD+N   TCFSFGSGTLQGHLLAGEERFSIEMDSN QVWYEILSFSKPAHILSFLS
Sbjct: 121 VNENRDTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLS 180

Query: 181 YPYVILRQKYFAYQSTNAVKKYLTASRS 208
           YPY+ILRQKYFA+QSTNAVKKYLT + S
Sbjct: 181 YPYIILRQKYFAHQSTNAVKKYLTPTHS 208

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BLAST of CcUC04G075110 vs. ExPASy Swiss-Prot
Match: Q8GXB1 (UPF0548 protein At2g17695 OS=Arabidopsis thaliana OX=3702 GN=At2g17695 PE=2 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.3e-76
Identity = 129/205 (62.93%), Postives = 164/205 (80.00%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60
           MVFL W RPS ++Q+  I + G+FNY +K+RG ++   + L+ED  I ++GFL+NHAR+L
Sbjct: 1   MVFLSWGRPSSEQQQQVINKTGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHARVL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHSGVKFCVCAKEFLPWVVMPLQIVYV 120
           VGSG E+YEKGKKALQNW+HFG++WAFVD +TPV +G KFC+C KE LPWV++PLQ+VYV
Sbjct: 61  VGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYV 120

Query: 121 NENRDSNMATTCFSFGSGTLQGHLLAGEERFSIEMDSNRQVWYEILSFSKPAHILSFLSY 180
           +E+R S      F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI SFSKPAH LSFL Y
Sbjct: 121 DESRKSRKGPAHFGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKPAHFLSFLGY 180

Query: 181 PYVILRQKYFAYQSTNAVKKYLTAS 206
           PYV LRQK+FA  S+ AV K++ AS
Sbjct: 181 PYVKLRQKHFARHSSEAVLKHVNAS 205

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BLAST of CcUC04G075110 vs. ExPASy Swiss-Prot
Match: Q86JL6 (UPF0548 protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0271742 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-18
Identity = 63/213 (29.58%), Postives = 108/213 (50.70%), Query Frame = 0


Query: 5   CWSRPSPQEQKACI--ERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARILVG 64
           C+ +PS  + K  I   R   F YS+ +   T + ++  + +       F ++  +I +G
Sbjct: 3   CFRKPSDSDIKQYINDRREEQFAYSNLY--GTQDYATKEEYEMDPKYSNFDVDQVKIQLG 62

Query: 65  SGVETYEKGKKALQNWRHFGLNWA-FVDSSTPVHSGVKFCVCAKEFLPWVVMPLQIVYVN 124
           +GVE ++K   AL+ W+HF L+W  F   +TP+  G    + +K+   W++   +I Y+ 
Sbjct: 63  TGVECFQKAVAALKQWKHFDLDWVDFYFKNTPIAVGETVGILSKQVGFWILSFARINYLY 122

Query: 125 ENRDSNMATTCFSFGSGTLQGHLLAGEERFSIE-------MDSNRQVWYEILSFSKPAHI 184
           +  D    +  F +  GTL+ H+  GEERF IE             V+YE+LSFS+P++ 
Sbjct: 123 DG-DQEDGSIKFGYSYGTLKDHVEKGEERFVIEWVRDPDGAPDKGAVYYEMLSFSEPSYW 182

Query: 185 LSFLSYPYVILRQKYFAYQSTNAVKKYLTASRS 208
           LS L YP     Q  F   S N + K + ++++
Sbjct: 183 LSQLGYPVTRYFQNKFVVDSCNQMLKAVGSNQN 212

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BLAST of CcUC04G075110 vs. ExPASy Swiss-Prot
Match: Q9RST8 (UPF0548 protein DR_2035 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) OX=243230 GN=DR_2035 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.8e-11
Identity = 44/143 (30.77%), Postives = 72/143 (50.35%), Query Frame = 0


Query: 58  RILVGSGVETYEKGKKALQNWRHFGLNWAF---VDSSTPV-HSGVKFCVCAKEFLPW--- 117
           R+ VG G   +E+ K AL+  + F  +W      ++STP+   G    +  + F PW   
Sbjct: 47  RVRVGEGEACWERAKAALRGGQMF-QDWVLRPHGEASTPLSRQGATVVLLVRHFGPWGRR 106

Query: 118 -----VVMPLQIVYVNENRDSNMATTCFSFGSGTLQGHLLAGEERFSIEMDSNRQVWYEI 177
                 +M  +++Y+ +  D       + FG GTL GHL+ GEERF +E D+   VW+++
Sbjct: 107 KWGLYSLMTNRVLYLVDEPDR------YGFGYGTLPGHLVRGEERFLLERDAGGAVWFDL 166

Query: 178 LSFSKPAHILSFLSYPYVILRQK 189
            +FS+ A   S  + P V   Q+
Sbjct: 167 TTFSRAALPFSRFAQPLVGAAQR 182

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BLAST of CcUC04G075110 vs. ExPASy TrEMBL
Match: A0A6J1GGC4 (UPF0548 protein At2g17695 OS=Cucurbita moschata OX=3662 GN=LOC111453688 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.0e-112
Identity = 196/207 (94.69%), Postives = 200/207 (96.62%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60
           MVFLCWSRPSPQEQK CI+R+GSFNYSSKFRGATANPSSCLQEDKG+SQEGFLLNHARIL
Sbjct: 1   MVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARIL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHSGVKFCVCAKEFLPWVVMPLQIVYV 120
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVH GVKFCVCAKEFLPWVVMPLQIVYV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYV 120

Query: 121 NENRDSNMATTCFSFGSGTLQGHLLAGEERFSIEMDSNRQVWYEILSFSKPAHILSFLSY 180
           NENR +NMA TCFSFGSGTLQGHLLAGEERFSIEMDSN QVWYEILSFSKPAHILSFLSY
Sbjct: 121 NENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSY 180

Query: 181 PYVILRQKYFAYQSTNAVKKYLTASRS 208
           PYVILRQKYFAYQSTNAVKKYLTA  S
Sbjct: 181 PYVILRQKYFAYQSTNAVKKYLTAKHS 207

[Close]

BLAST of CcUC04G075110 vs. ExPASy TrEMBL
Match: A0A6J1IMP9 (UPF0548 protein At2g17695 OS=Cucurbita maxima OX=3661 GN=LOC111478798 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 7.8e-112
Identity = 195/207 (94.20%), Postives = 200/207 (96.62%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60
           MVFLCWSRPSPQEQK CI+R+GSFNYSSKFRGATANPSSCLQEDKG+SQEGFLLNHARIL
Sbjct: 1   MVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARIL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHSGVKFCVCAKEFLPWVVMPLQIVYV 120
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVH GVKFCVCAKEFLPWVVMPLQIVYV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYV 120

Query: 121 NENRDSNMATTCFSFGSGTLQGHLLAGEERFSIEMDSNRQVWYEILSFSKPAHILSFLSY 180
           NENR +NMA TCFSFGSGTLQGHLLAGEERFSIEMDSN QVWYEILSFSKPAHILSFLSY
Sbjct: 121 NENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSY 180

Query: 181 PYVILRQKYFAYQSTNAVKKYLTASRS 208
           PY+ILRQKYFAYQSTNAVKKYLTA  S
Sbjct: 181 PYIILRQKYFAYQSTNAVKKYLTAKHS 207

[Close]

BLAST of CcUC04G075110 vs. ExPASy TrEMBL
Match: A0A1S3B2T0 (UPF0548 protein At2g17695 OS=Cucumis melo OX=3656 GN=LOC103485173 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 9.5e-110
Identity = 193/207 (93.24%), Postives = 198/207 (95.65%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60
           MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL
Sbjct: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHSGVKFCVCAKEFLPWVVMPLQIVYV 120
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVH GVKFCVCAKEFLPWVV+PLQIVYV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYV 120

Query: 121 NENRDSNMATTCFSFGSGTLQGHLLAGEERFSIEMDSNRQVWYEILSFSKPAHILSFLSY 180
           NENR++N   TCFSFGSGTLQGHLLAGEERFSIEMDSN QVWYEILS SKPAHILSFLSY
Sbjct: 121 NENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSISKPAHILSFLSY 180

Query: 181 PYVILRQKYFAYQSTNAVKKYLTASRS 208
           PYVILRQKYFA+QSTNA KKYLT + S
Sbjct: 181 PYVILRQKYFAHQSTNAFKKYLTPTHS 207

[Close]

BLAST of CcUC04G075110 vs. ExPASy TrEMBL
Match: A0A0A0KKV8 (DUF1990 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G507400 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 6.2e-109
Identity = 193/208 (92.79%), Postives = 199/208 (95.67%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDK-GISQEGFLLNHARI 60
           MVFLCWSRPSPQEQKACIERAGSFNY+SKFRGATANPSSCLQEDK GISQEGFLLNHARI
Sbjct: 1   MVFLCWSRPSPQEQKACIERAGSFNYNSKFRGATANPSSCLQEDKGGISQEGFLLNHARI 60

Query: 61  LVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHSGVKFCVCAKEFLPWVVMPLQIVY 120
           LVGSGV TYEKGKKALQNWRHFGLNWAFVDSSTPVH GVKFCVCAKEFLPWVV+PLQIVY
Sbjct: 61  LVGSGVGTYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVY 120

Query: 121 VNENRDSNMATTCFSFGSGTLQGHLLAGEERFSIEMDSNRQVWYEILSFSKPAHILSFLS 180
           VNENRD+N   TCFSFGSGTLQGHLLAGEERFSIEMDSN QVWYEILSFSKPAHILSFLS
Sbjct: 121 VNENRDTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLS 180

Query: 181 YPYVILRQKYFAYQSTNAVKKYLTASRS 208
           YPY+ILRQKYFA+QSTNAVKKYLT + S
Sbjct: 181 YPYIILRQKYFAHQSTNAVKKYLTPTHS 208

[Close]

BLAST of CcUC04G075110 vs. ExPASy TrEMBL
Match: A0A6J1CKD3 (UPF0548 protein At2g17695 OS=Momordica charantia OX=3673 GN=LOC111012092 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.4e-105
Identity = 185/205 (90.24%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60
           MVFLCWSRPSP E KACI+R+GSFNYSSKFRGATANPSS L+EDKG+ QEGFLLNHARIL
Sbjct: 1   MVFLCWSRPSPLEHKACIDRSGSFNYSSKFRGATANPSSSLKEDKGLQQEGFLLNHARIL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHSGVKFCVCAKEFLPWVVMPLQIVYV 120
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPV+ GVKFCVC+KEFLPWVVMPLQIVYV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVNPGVKFCVCSKEFLPWVVMPLQIVYV 120

Query: 121 NENRDSNMATTCFSFGSGTLQGHLLAGEERFSIEMDSNRQVWYEILSFSKPAHILSFLSY 180
           NENRD+ MA TCFSFGSGTLQGHLLAGEERFSIEMD N QVWYEILSFSKPAHILSF+SY
Sbjct: 121 NENRDAKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNNQVWYEILSFSKPAHILSFISY 180

Query: 181 PYVILRQKYFAYQSTNAVKKYLTAS 206
           PYVILRQKYFA+QS+NAVKKY TAS
Sbjct: 181 PYVILRQKYFAHQSSNAVKKYSTAS 205

[Close]

BLAST of CcUC04G075110 vs. TAIR 10
Match: AT2G17695.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 259 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 197; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 287.3 bits (734), Expect = 9.5e-78
Identity = 129/205 (62.93%), Postives = 164/205 (80.00%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60
           MVFL W RPS ++Q+  I + G+FNY +K+RG ++   + L+ED  I ++GFL+NHAR+L
Sbjct: 1   MVFLSWGRPSSEQQQQVINKTGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHARVL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHSGVKFCVCAKEFLPWVVMPLQIVYV 120
           VGSG E+YEKGKKALQNW+HFG++WAFVD +TPV +G KFC+C KE LPWV++PLQ+VYV
Sbjct: 61  VGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYV 120

Query: 121 NENRDSNMATTCFSFGSGTLQGHLLAGEERFSIEMDSNRQVWYEILSFSKPAHILSFLSY 180
           +E+R S      F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI SFSKPAH LSFL Y
Sbjct: 121 DESRKSRKGPAHFGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKPAHFLSFLGY 180

Query: 181 PYVILRQKYFAYQSTNAVKKYLTAS 206
           PYV LRQK+FA  S+ AV K++ AS
Sbjct: 181 PYVKLRQKHFARHSSEAVLKHVNAS 205

[Close]

BLAST of CcUC04G075110 vs. TAIR 10
Match: AT2G17695.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 287.3 bits (734), Expect = 9.5e-78
Identity = 129/205 (62.93%), Postives = 164/205 (80.00%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60
           MVFL W RPS ++Q+  I + G+FNY +K+RG ++   + L+ED  I ++GFL+NHAR+L
Sbjct: 1   MVFLSWGRPSSEQQQQVINKTGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHARVL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHSGVKFCVCAKEFLPWVVMPLQIVYV 120
           VGSG E+YEKGKKALQNW+HFG++WAFVD +TPV +G KFC+C KE LPWV++PLQ+VYV
Sbjct: 61  VGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYV 120

Query: 121 NENRDSNMATTCFSFGSGTLQGHLLAGEERFSIEMDSNRQVWYEILSFSKPAHILSFLSY 180
           +E+R S      F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI SFSKPAH LSFL Y
Sbjct: 121 DESRKSRKGPAHFGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKPAHFLSFLGY 180

Query: 181 PYVILRQKYFAYQSTNAVKKYLTAS 206
           PYV LRQK+FA  S+ AV K++ AS
Sbjct: 181 PYVKLRQKHFARHSSEAVLKHVNAS 205

[Close]

BLAST of CcUC04G075110 vs. TAIR 10
Match: AT2G17695.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960). )

HSP 1 Score: 287.3 bits (734), Expect = 9.5e-78
Identity = 129/205 (62.93%), Postives = 164/205 (80.00%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60
           MVFL W RPS ++Q+  I + G+FNY +K+RG ++   + L+ED  I ++GFL+NHAR+L
Sbjct: 1   MVFLSWGRPSSEQQQQVINKTGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHARVL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHSGVKFCVCAKEFLPWVVMPLQIVYV 120
           VGSG E+YEKGKKALQNW+HFG++WAFVD +TPV +G KFC+C KE LPWV++PLQ+VYV
Sbjct: 61  VGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYV 120

Query: 121 NENRDSNMATTCFSFGSGTLQGHLLAGEERFSIEMDSNRQVWYEILSFSKPAHILSFLSY 180
           +E+R S      F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI SFSKPAH LSFL Y
Sbjct: 121 DESRKSRKGPAHFGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKPAHFLSFLGY 180

Query: 181 PYVILRQKYFAYQSTNAVKKYLTAS 206
           PYV LRQK+FA  S+ AV K++ AS
Sbjct: 181 PYVKLRQKHFARHSSEAVLKHVNAS 205

The following BLAST results are available for this feature:

BLAST of CcUC04G075110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950650.1	1.2e-111	94.69	UPF0548 protein At2g17695 [Cucurbita moschata] >XP_023543885.1 UPF0548 protein A...	[more]
XP_022979037.1	1.6e-111	94.20	UPF0548 protein At2g17695 [Cucurbita maxima]	[more]
XP_038883220.1	1.2e-109	93.24	UPF0548 protein At2g17695 isoform X1 [Benincasa hispida] >XP_038883221.1 UPF0548...	[more]
XP_008440884.1	2.0e-109	93.24	PREDICTED: UPF0548 protein At2g17695 [Cucumis melo] >XP_008440885.1 PREDICTED: U...	[more]
XP_004134836.1	1.3e-108	92.79	UPF0548 protein At2g17695 isoform X1 [Cucumis sativus] >KGN48967.1 hypothetical ...	[more]

BLAST of CcUC04G075110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GXB1	1.3e-76	62.93	UPF0548 protein At2g17695 OS=Arabidopsis thaliana OX=3702 GN=At2g17695 PE=2 SV=1	[more]
Q86JL6	1.3e-18	29.58	UPF0548 protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0271742 PE=3 SV=1	[more]
Q9RST8	9.8e-11	30.77	UPF0548 protein DR_2035 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 2053...	[more]

BLAST of CcUC04G075110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GGC4	6.0e-112	94.69	UPF0548 protein At2g17695 OS=Cucurbita moschata OX=3662 GN=LOC111453688 PE=4 SV=...	[more]
A0A6J1IMP9	7.8e-112	94.20	UPF0548 protein At2g17695 OS=Cucurbita maxima OX=3661 GN=LOC111478798 PE=4 SV=1	[more]
A0A1S3B2T0	9.5e-110	93.24	UPF0548 protein At2g17695 OS=Cucumis melo OX=3656 GN=LOC103485173 PE=4 SV=1	[more]
A0A0A0KKV8	6.2e-109	92.79	DUF1990 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G507400 PE=...	[more]
A0A6J1CKD3	1.4e-105	90.24	UPF0548 protein At2g17695 OS=Momordica charantia OX=3673 GN=LOC111012092 PE=4 SV...	[more]

BLAST of CcUC04G075110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17695.1	9.5e-78	62.93	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT2G17695.2	9.5e-78	62.93	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT2G17695.3	9.5e-78	62.93	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018960	Domain of unknown function DUF1990	PFAM	PF09348	DUF1990	coord: 48..196 e-value: 4.6E-40 score: 137.2
None	No IPR available	PANTHER	PTHR34202	UPF0548 PROTEIN	coord: 1..205
None	No IPR available	PANTHER	PTHR34202:SF1	UPF0548 PROTEIN	coord: 1..205

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC04G075110.1	CcUC04G075110.1	mRNA