CcUC04G074520 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC04G074520
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Zinc finger protein
Location	CicolChr04: 30452252 .. 30455690 (+)
RNA-Seq Expression	CcUC04G074520
Synteny	CcUC04G074520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATTCCTAAACACTCCAAAGCTTAGACCGAGGGCTCACTGCCGTTGCCGTAAAAGGCCATCGAAGGCGAAGCCCACAAAAACCACAAAAAAAACCCGCTGGCAAAGCTAGCCCACACAGAGAAGTAGAAGAAGAAGAAGAAGAAGAACGGCCCTGACTGGTGTGTGCTGGAGGCGGAAATTTTCGCCTTCCACTCTCCTCTTCTCTTCTTCGAGCACACTTGTTGTTCTTTGACCATCAGTTGAGCTAGCTAAGTATTTCGAGCAATGGATGGAGGGAAGGAGGGGATAGAAGGAAAAGTAGCGTCGCAACTAGCAATGGGCGAAGGTAAAGAAGGCGATTGGGAGTGCAGTGGATGCAAGAACAGGAACTATGCTTTCCGATCCTTCTGTAACAGATGCAAACAACCTCGCCTTCTCGTCGACAATAAAACGCCTCCAGACTCTAAATGGCTTCCTCGCATCGGTGACTGGATCTGCACGGGTTAGCTTCCTATAAAAACTGTACTTGCAGTTTTTCTTTGCCTTTATGCAACCTGCAATTTATGTTGTATTCCCTATTTCGTTTTGTTGGTTTTCTTAGCTTAACTTAGAATTCAACGTTTAGTTTAGAATTTTAGAGCAGCACTAATTCTATGCCGTTTCTGACACTTGGTGTGGGAGTTTTGGTTGAAGGATTTCAAGGTGATGGAGTTTTGTTGAACTTTTTCTCTTTTCTATCATCTGACTAGGAGTAAAGTTATCGAGTTAGGCTTATAGCGCTTACTCCAATGAGTTCTCATGCTTCGAAATAATGGTTTTCCACCTAAATGCAATGAGCTAATAATTCTTGAAAGTTTCCAATTTAGCTCCACTAAAATTCGTTGATCTTATCGGTAAATGGAATACTAATCGAGATAGCCTGAGTGCAAGCTATTAAACATCCCGTGCAATAAAATTACTGATTTACAGCCAATTCAGAATTTGTAGTTGGACTTGATACATTTTCCAAAGCCATGTGTTATATATCATAGAAGTATATGAAGAGTGATAACGTTTTGATCATTGGTTTACCATTCACCAGACTTATGACTGAGTAAATCAAAGGAATCTTCATTGCATCTTTATCTCCAGTTCAAGATTTTCTTTGAGGATTGTTGCCTGCTCTTTTCATTAATGTTTCTATTCCAGTGAACTGGCGCTTTTAGAAAAAATGCTAAATTAGGTTGAGTCATGAGTCGTTTGTGTTTTTTGTATGTGTATATGGTGTGGATGGACTGCTTGGTGTGCGTATACCTGGTTTGCTTGTGGGTTGGGTTTGTCTGGCTCTGGTGCAATAGGTTGCACTAACAACAATTATGCATCAAGAGAGAAGTGCAAAAAGTGTGGACAACCAAAGGAGGTAGCAGCAATGCCAGCAATTGCAATCCCTGGGGCTTCTTTTCCAACTTATTCACACTATTTTGCCAGGACCCAAGGAGGATTGGATTCAAAGATAAATCTTGGATTAATAGGAAATGGCACTTCACAGCATCTGCATCCCCTGAGCTCTAACTGGTCCTTGGGAGGTGCTGATAAGTATGGAATTCATGCAGCTCCAACATTTCCTTTGGTTGGAAATAATTCTGCAATCTCGTATATGAGTTTGGCTAATCAGCTCCTTTCAGTTCCAAAGGGCTGGCGGAATGGTGACTGGTTATGCAACTGTGGTTTCCATAATTACTCTTCACGTGCACAGGTGAGGGTTCCACCTTCACGTACTGAGAGTTGTTTACTTTTCCAATTGGTGTTTGTAATTTCTCATTTTTGTTTCCACCTGTTGTTTGTCTAACTGACTTTGTCTTACTTGCAGTGCAAGAAGTGCAATGCTTCACCACAAGGTACATGACATCTCTCTCTGAGTCTCTACGTTTTCAATGGTAGGGACTATTTTATAGTTTCTGCACGTAATAACGAAAACGAGCGAAAAGGCATTGGACCTATGGGATGTCTTGCGTAAAAGATCTTTATATTGTTTTAGCTATCCTATTTATCTTCTTTGTTGTCGGTTGAATGAGTAGATTCTCAGAGTTTGGAGTAGTAATGTCTCATAGGAGGGCATTAGTGGAATGGAAAAACTTAGTTGGCCCAAGGAGAGGTTATTCTGGTATCCTTGATGATGAATGTCGATTTGAATTCTAATTCTGAATGAAGTTGAGCTTCCCCCCGGGGATTAGACTAATCTGCCTCTCTTTCCTTCTTTCCTTTATATATTTATTTATTTATTTTATTTGGAGTATGCAGCACTTGGAATGAAGCGATTAGCATCTGAAGAACTTGTTCATCACTGGGATAACAAGAGATTGAATATTGGACCGGTATTCCTACACAGGAGAAAAAGGATGATTAATTTTTTGTATTAAAGAAAAAATTGCTGTTAAAATTTAGTGAAACTTATCAATGGCTTGTTCCCGTTCTTTTCTTGGTATTCAGGCAAATGAGCAACAACAATCTTGCCCAGGTTTTGAGCAGATGATGGGCTCCAGTAGTGACCCAAATGTGGGATTATATAATTCTTATCCCCATGAAAGTTCTAATGTAGCTCCAAATTTGGAAATGCCAATGCATTTTCCCCCACAAGCAACTGCACCAACGCTCCTAGGGAAAGGGTAATATGCATTAGTTAGCTGTATTTCATTTTCTTCGACGATCAAAATAATGTGATATTTAACACTTTTCTTTCTGGCCAAAATCGCTATCAAGACTTCTGATGTGATGAATACTACTTTATAGTGCTTGATATTGCCAAATATTTTAGGACCATATAACAACTTGCTTTTTGGTCAACTACGAACTCTTTACTGATTGAGACTAATACATTCCCACCTTATTGAATCTGCAGAGCAAAGCAGTGGCGGAACGGAGATTGGATGTGCACAAATTGCAATAATCATAATTATGCATCCCGTTTACAATGTAACAGGTTATCACCTAAACTAGTATTTTCCCTTCACATTCATGTTGAATGTGTATGTGTACATGCTATATATATAATATTTGATTGATCTTTTGATCTTTAGATCTTATAACTCGATTACGCCACAAGTTCTTATATGGAGTTTGGCAGCTCGCATTGCATTTTATTGCACGCCCATTATTGAAATGCTTTTTTGTAACAGGTGCAAGACTCGGAGAGATTCACTTTCTCTGCCCCTCAGTGCCATCTAAGCACATTCCTACAGACTTCGGATGGTTGTTGTTCTATGCTGCAAGTTTCTTTCGACCCAATTTTTCGGATCTCTTACTCGACTCTTCTAGTCTCCAAGGTATTGATTGATTGTCAGTTTTCCATTACTTAGGGAAGGAGGTTTGGCTGTGAATGACATTACTATTTTTGTTGAACAGTTGAGAATTTTAGTGTTGAATCAGTTTTATATATATATATATATATATAATAAGATATATATTTTCAGTTTTGCATC

mRNA sequence

TAATTCCTAAACACTCCAAAGCTTAGACCGAGGGCTCACTGCCGTTGCCGTAAAAGGCCATCGAAGGCGAAGCCCACAAAAACCACAAAAAAAACCCGCTGGCAAAGCTAGCCCACACAGAGAAGTAGAAGAAGAAGAAGAAGAAGAACGGCCCTGACTGGTGTGTGCTGGAGGCGGAAATTTTCGCCTTCCACTCTCCTCTTCTCTTCTTCGAGCACACTTGTTGTTCTTTGACCATCAGTTGAGCTAGCTAAGTATTTCGAGCAATGGATGGAGGGAAGGAGGGGATAGAAGGAAAAGTAGCGTCGCAACTAGCAATGGGCGAAGGTAAAGAAGGCGATTGGGAGTGCAGTGGATGCAAGAACAGGAACTATGCTTTCCGATCCTTCTGTAACAGATGCAAACAACCTCGCCTTCTCGTCGACAATAAAACGCCTCCAGACTCTAAATGGCTTCCTCGCATCGGTGACTGGATCTGCACGGTCGTTTGTGTTTTTTGTATGTGTATATGGTGTGGATGGACTGCTTGGTGTGCGTATACCTGGTTTGCTTGTGGGTTGGGTTTGTCTGGCTCTGGTGCAATAGGTTGCACTAACAACAATTATGCATCAAGAGAGAAGTGCAAAAAGTGTGGACAACCAAAGGAGGTAGCAGCAATGCCAGCAATTGCAATCCCTGGGGCTTCTTTTCCAACTTATTCACACTATTTTGCCAGGACCCAAGGAGGATTGGATTCAAAGATAAATCTTGGATTAATAGGAAATGGCACTTCACAGCATCTGCATCCCCTGAGCTCTAACTGGTCCTTGGGAGGTGCTGATAAGTATGGAATTCATGCAGCTCCAACATTTCCTTTGGTTGGAAATAATTCTGCAATCTCGTATATGAGTTTGGCTAATCAGCTCCTTTCAGTTCCAAAGGGCTGGCGGAATGGTGACTGGTTATGCAACTGTGGTTTCCATAATTACTCTTCACGTGCACAGTGCAAGAAGTGCAATGCTTCACCACAAGCACTTGGAATGAAGCGATTAGCATCTGAAGAACTTGTTCATCACTGGGATAACAAGAGATTGAATATTGGACCGAAAAAATTGCTGTTAAAATTTAGTGAAACTTATCAATGGCTTGTTCCCGTTCTTTTCTTGGCAAATGAGCAACAACAATCTTGCCCAGGTTTTGAGCAGATGATGGGCTCCAGTAGTGACCCAAATGTGGGATTATATAATTCTTATCCCCATGAAAGTTCTAATGTAGCTCCAAATTTGGAAATGCCAATGCATTTTCCCCCACAAGCAACTGCACCAACGCTCCTAGGGAAAGGAGCAAAGCAGTGGCGGAACGGAGATTGGATGTGCACAAATTGCAATAATCATAATTATGCATCCCGTTTACAATGTAACAGGTTATCACCTAAACTAGTATTTTCCCTTCACATTCATGTTGAATATCTTATAACTCGATTACGCCACAAGTTCTTATATGGAGTTTGGCAGCTCGCATTGCATTTTATTGCACGTGCAAGACTCGGAGAGATTCACTTTCTCTGCCCCTCAGTGCCATCTAAGCACATTCCTACAGACTTCGGATGGTTGTTGTTCTATGCTGCAAGTTTCTTTCGACCCAATTTTTCGGATCTCTTACTCGACTCTTCTAGTCTCCAAGGTATTGATTGATTGTCAGTTTTCCATTACTTAGGGAAGGAGGTTTGGCTGTGAATGACATTACTATTTTTGTTGAACAGTTGAGAATTTTAGTGTTGAATCAGTTTTATATATATATATATATATATAATAAGATATATATTTTCAGTTTTGCATC

Coding sequence (CDS)

ATGGATGGAGGGAAGGAGGGGATAGAAGGAAAAGTAGCGTCGCAACTAGCAATGGGCGAAGGTAAAGAAGGCGATTGGGAGTGCAGTGGATGCAAGAACAGGAACTATGCTTTCCGATCCTTCTGTAACAGATGCAAACAACCTCGCCTTCTCGTCGACAATAAAACGCCTCCAGACTCTAAATGGCTTCCTCGCATCGGTGACTGGATCTGCACGGTCGTTTGTGTTTTTTGTATGTGTATATGGTGTGGATGGACTGCTTGGTGTGCGTATACCTGGTTTGCTTGTGGGTTGGGTTTGTCTGGCTCTGGTGCAATAGGTTGCACTAACAACAATTATGCATCAAGAGAGAAGTGCAAAAAGTGTGGACAACCAAAGGAGGTAGCAGCAATGCCAGCAATTGCAATCCCTGGGGCTTCTTTTCCAACTTATTCACACTATTTTGCCAGGACCCAAGGAGGATTGGATTCAAAGATAAATCTTGGATTAATAGGAAATGGCACTTCACAGCATCTGCATCCCCTGAGCTCTAACTGGTCCTTGGGAGGTGCTGATAAGTATGGAATTCATGCAGCTCCAACATTTCCTTTGGTTGGAAATAATTCTGCAATCTCGTATATGAGTTTGGCTAATCAGCTCCTTTCAGTTCCAAAGGGCTGGCGGAATGGTGACTGGTTATGCAACTGTGGTTTCCATAATTACTCTTCACGTGCACAGTGCAAGAAGTGCAATGCTTCACCACAAGCACTTGGAATGAAGCGATTAGCATCTGAAGAACTTGTTCATCACTGGGATAACAAGAGATTGAATATTGGACCGAAAAAATTGCTGTTAAAATTTAGTGAAACTTATCAATGGCTTGTTCCCGTTCTTTTCTTGGCAAATGAGCAACAACAATCTTGCCCAGGTTTTGAGCAGATGATGGGCTCCAGTAGTGACCCAAATGTGGGATTATATAATTCTTATCCCCATGAAAGTTCTAATGTAGCTCCAAATTTGGAAATGCCAATGCATTTTCCCCCACAAGCAACTGCACCAACGCTCCTAGGGAAAGGAGCAAAGCAGTGGCGGAACGGAGATTGGATGTGCACAAATTGCAATAATCATAATTATGCATCCCGTTTACAATGTAACAGGTTATCACCTAAACTAGTATTTTCCCTTCACATTCATGTTGAATATCTTATAACTCGATTACGCCACAAGTTCTTATATGGAGTTTGGCAGCTCGCATTGCATTTTATTGCACGTGCAAGACTCGGAGAGATTCACTTTCTCTGCCCCTCAGTGCCATCTAAGCACATTCCTACAGACTTCGGATGGTTGTTGTTCTATGCTGCAAGTTTCTTTCGACCCAATTTTTCGGATCTCTTACTCGACTCTTCTAGTCTCCAAGGTATTGATTGA

Protein sequence

MDGGKEGIEGKVASQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDSKWLPRIGDWICTVVCVFCMCIWCGWTAWCAYTWFACGLGLSGSGAIGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGGLDSKINLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLVGNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHHWDNKRLNIGPKKLLLKFSETYQWLVPVLFLANEQQQSCPGFEQMMGSSSDPNVGLYNSYPHESSNVAPNLEMPMHFPPQATAPTLLGKGAKQWRNGDWMCTNCNNHNYASRLQCNRLSPKLVFSLHIHVEYLITRLRHKFLYGVWQLALHFIARARLGEIHFLCPSVPSKHIPTDFGWLLFYAASFFRPNFSDLLLDSSSLQGID

Homology

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BLAST of CcUC04G074520 vs. NCBI nr
Match: KAA0025683.1 (putative RNA-binding protein C17H9.04c [Cucumis melo var. makuwa] >TYK12558.1 putative RNA-binding protein C17H9.04c [Cucumis melo var. makuwa])

HSP 1 Score: 661.4 bits (1705), Expect = 5.9e-186
Identity = 326/434 (75.12%), Postives = 340/434 (78.34%), Query Frame = 0


Query: 1   MDGGKEGIEGKVASQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEGIEGK +SQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASSQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTVVCVFCMCIWCGWTAWCAYTWFACGLGLSGSGAIGCTNNNYASREKCK 120
           KWLPRIGDWICT                                  GCTNNNYASREKCK
Sbjct: 61  KWLPRIGDWICT----------------------------------GCTNNNYASREKCK 120

Query: 121 KCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGGLDSKINLGLIGNGTSQHLHPLSSNWS 180
           KCGQPKEVAAMPA+AIPGASFPTYSHYFARTQGGLDSK+NLGLIGNGTSQHLHPLSSNWS
Sbjct: 121 KCGQPKEVAAMPALAIPGASFPTYSHYFARTQGGLDSKMNLGLIGNGTSQHLHPLSSNWS 180

Query: 181 LGGADKYGIHAAPTFPLVGNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQC 240
           +GGADKYGIHAAPTFPL GNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQC
Sbjct: 181 MGGADKYGIHAAPTFPLGGNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQC 240

Query: 241 KKCNASPQALGMKRLASEELVHHWDNKRLNIGPKKLLLKFSETYQWLVPVLFLANEQQQS 300
           KKCNASPQALGMKRLASEELVH WDNKRLNIG                     ANEQQQS
Sbjct: 241 KKCNASPQALGMKRLASEELVHQWDNKRLNIGQ--------------------ANEQQQS 300

Query: 301 CPGFEQMMGSSSDPNVGLYNSYPHESSNVAPNLEMPMHFPPQATAPTLLGKGAKQWRNGD 360
            PG EQMMG+SSDPNVGLYN YPHESS+VAPNLEMP+ FPPQATAPTLLGKGAKQWRNGD
Sbjct: 301 YPGLEQMMGTSSDPNVGLYNPYPHESSSVAPNLEMPIQFPPQATAPTLLGKGAKQWRNGD 360

Query: 361 WMCTNCNNHNYASRLQCNRLSPKLVFSLHIHVEYLITRLRHKFLYGVWQLALHFIARARL 420
           WMCTNCNNHNYASRL CN  +            Y + R     +  ++ L    +  ARL
Sbjct: 361 WMCTNCNNHNYASRLHCNSCATS---------SYYLARK----MADLYVLLAATLVGARL 367

Query: 421 GEIHFLCPSVPSKH 435
            EIHFLCPSVPSK+
Sbjct: 421 KEIHFLCPSVPSKN 367

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BLAST of CcUC04G074520 vs. NCBI nr
Match: XP_038883349.1 (uncharacterized RNA-binding protein C17H9.04c [Benincasa hispida])

HSP 1 Score: 655.2 bits (1689), Expect = 4.2e-184
Identity = 316/379 (83.38%), Postives = 317/379 (83.64%), Query Frame = 0


Query: 1   MDGGKEGIEGKVASQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEGIEGK ASQ  MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKAASQQTMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTVVCVFCMCIWCGWTAWCAYTWFACGLGLSGSGAIGCTNNNYASREKCK 120
           KWLPRIGDWICT                                  GCTNNNYASREKCK
Sbjct: 61  KWLPRIGDWICT----------------------------------GCTNNNYASREKCK 120

Query: 121 KCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGGLDSKINLGLIGNGTSQHLHPLSSNWS 180
           KCGQPKE+AAMPAIAIPGASFPTYSHYFARTQGGLDSKINLGLIGNGTSQHLHPLSSNWS
Sbjct: 121 KCGQPKEIAAMPAIAIPGASFPTYSHYFARTQGGLDSKINLGLIGNGTSQHLHPLSSNWS 180

Query: 181 LGGADKYGIHAAPTFPLVGNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQC 240
           LGGADKYGIHAAPTFPL GNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQC
Sbjct: 181 LGGADKYGIHAAPTFPLGGNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQC 240

Query: 241 KKCNASPQALGMKRLASEELVHHWDNKRLNIGPKKLLLKFSETYQWLVPVLFLANEQQQS 300
           KKCNASPQALGMKRLASEELVHHWDNKRLNIG                     ANEQQQS
Sbjct: 241 KKCNASPQALGMKRLASEELVHHWDNKRLNIGQ--------------------ANEQQQS 300

Query: 301 CPGFEQMMGSSSDPNVGLYNSYPHESSNVAPNLEMPMHFPPQATAPTLLGKGAKQWRNGD 360
            PGFEQMMGSSSDPNVGLYNSYPHESSNVAPNLEMPM FPPQATAP LLGKGAKQWRNGD
Sbjct: 301 YPGFEQMMGSSSDPNVGLYNSYPHESSNVAPNLEMPMQFPPQATAPALLGKGAKQWRNGD 325

Query: 361 WMCTNCNNHNYASRLQCNR 380
           WMCTNCNNHNYASRLQCNR
Sbjct: 361 WMCTNCNNHNYASRLQCNR 325

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BLAST of CcUC04G074520 vs. NCBI nr
Match: XP_004134868.1 (uncharacterized RNA-binding protein C17H9.04c [Cucumis sativus] >KGN48905.1 hypothetical protein Csa_003493 [Cucumis sativus])

HSP 1 Score: 646.7 bits (1667), Expect = 1.5e-181
Identity = 311/379 (82.06%), Postives = 316/379 (83.38%), Query Frame = 0


Query: 1   MDGGKEGIEGKVASQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEGIEGK + QLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTVVCVFCMCIWCGWTAWCAYTWFACGLGLSGSGAIGCTNNNYASREKCK 120
           KWLPRIGDWICT                                  GCTNNNYASREKCK
Sbjct: 61  KWLPRIGDWICT----------------------------------GCTNNNYASREKCK 120

Query: 121 KCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGGLDSKINLGLIGNGTSQHLHPLSSNWS 180
           KCGQPKEVAAMPA+AIPGASFPTYSHYFARTQGGLDSK+NLGLIGNGTSQHLHPLSSNWS
Sbjct: 121 KCGQPKEVAAMPALAIPGASFPTYSHYFARTQGGLDSKMNLGLIGNGTSQHLHPLSSNWS 180

Query: 181 LGGADKYGIHAAPTFPLVGNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQC 240
           LGGADKYGIHAAPTFPL GNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQC
Sbjct: 181 LGGADKYGIHAAPTFPLSGNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQC 240

Query: 241 KKCNASPQALGMKRLASEELVHHWDNKRLNIGPKKLLLKFSETYQWLVPVLFLANEQQQS 300
           KKCNASPQALGMKRLASEELVH WDNKRLNIG                     ANEQQQS
Sbjct: 241 KKCNASPQALGMKRLASEELVHQWDNKRLNIGQ--------------------ANEQQQS 300

Query: 301 CPGFEQMMGSSSDPNVGLYNSYPHESSNVAPNLEMPMHFPPQATAPTLLGKGAKQWRNGD 360
            PGFEQMMG+ SDPNVGLYNSYPHESS+VAPNLEMPM FPPQATAPTLLGKGAKQWRNGD
Sbjct: 301 YPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAKQWRNGD 325

Query: 361 WMCTNCNNHNYASRLQCNR 380
           WMCTNCNNHNYASRL CNR
Sbjct: 361 WMCTNCNNHNYASRLHCNR 325

[Close]

BLAST of CcUC04G074520 vs. NCBI nr
Match: XP_008440810.1 (PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo])

HSP 1 Score: 643.7 bits (1659), Expect = 1.3e-180
Identity = 309/379 (81.53%), Postives = 316/379 (83.38%), Query Frame = 0


Query: 1   MDGGKEGIEGKVASQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEGIEGK +SQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASSQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTVVCVFCMCIWCGWTAWCAYTWFACGLGLSGSGAIGCTNNNYASREKCK 120
           KWLPRIGDWICT                                  GCTNNNYASREKCK
Sbjct: 61  KWLPRIGDWICT----------------------------------GCTNNNYASREKCK 120

Query: 121 KCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGGLDSKINLGLIGNGTSQHLHPLSSNWS 180
           KCGQPKEVAAMPA+AIPGASFPTYSHYFARTQGGLDSK+NLGLIGNGTSQHLHPLSSNWS
Sbjct: 121 KCGQPKEVAAMPALAIPGASFPTYSHYFARTQGGLDSKMNLGLIGNGTSQHLHPLSSNWS 180

Query: 181 LGGADKYGIHAAPTFPLVGNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQC 240
           +GGADKYGIHAAPTFPL GNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQC
Sbjct: 181 MGGADKYGIHAAPTFPLGGNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQC 240

Query: 241 KKCNASPQALGMKRLASEELVHHWDNKRLNIGPKKLLLKFSETYQWLVPVLFLANEQQQS 300
           KKCNASPQALGMKRLASEELVH WDNKRLNIG                     ANEQQQS
Sbjct: 241 KKCNASPQALGMKRLASEELVHQWDNKRLNIGQ--------------------ANEQQQS 300

Query: 301 CPGFEQMMGSSSDPNVGLYNSYPHESSNVAPNLEMPMHFPPQATAPTLLGKGAKQWRNGD 360
            PG EQMMG+SSDPNVGLYN YPHESS+VAPNLEMP+ FPPQATAPTLLGKGAKQWRNGD
Sbjct: 301 YPGLEQMMGTSSDPNVGLYNPYPHESSSVAPNLEMPIQFPPQATAPTLLGKGAKQWRNGD 325

Query: 361 WMCTNCNNHNYASRLQCNR 380
           WMCTNCNNHNYASRL CNR
Sbjct: 361 WMCTNCNNHNYASRLHCNR 325

[Close]

BLAST of CcUC04G074520 vs. NCBI nr
Match: XP_022132998.1 (uncharacterized RNA-binding protein C17H9.04c [Momordica charantia])

HSP 1 Score: 597.4 bits (1539), Expect = 1.0e-166
Identity = 289/379 (76.25%), Postives = 302/379 (79.68%), Query Frame = 0


Query: 1   MDGGKEGIEGKVASQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEG+E K + Q+AM EGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGMEAKASLQVAMAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTVVCVFCMCIWCGWTAWCAYTWFACGLGLSGSGAIGCTNNNYASREKCK 120
           KWLPRIGDWICT                                  GCTNNNYASREKCK
Sbjct: 61  KWLPRIGDWICT----------------------------------GCTNNNYASREKCK 120

Query: 121 KCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGGLDSKINLGLIGNGTSQHLHPLSSNWS 180
           KCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGGL++K+NLGLIGNGTSQ  HPLSSNW 
Sbjct: 121 KCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGGLNTKMNLGLIGNGTSQQPHPLSSNWP 180

Query: 181 LGGADKYGIHAAPTFPLVGNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQC 240
           LGG DKYGIHAA TFPL GNNSAISYMS  NQ+L VPKGWRNGDW+CNCGFHNYSSRAQC
Sbjct: 181 LGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQILLVPKGWRNGDWICNCGFHNYSSRAQC 240

Query: 241 KKCNASPQALGMKRLASEELVHHWDNKRLNIGPKKLLLKFSETYQWLVPVLFLANEQQQS 300
           KKCNASPQALGMKRLASEELVH WD+KRLNIG                      NEQQQS
Sbjct: 241 KKCNASPQALGMKRLASEELVHPWDSKRLNIGQ--------------------TNEQQQS 300

Query: 301 CPGFEQMMGSSSDPNVGLYNSYPHESSNVAPNLEMPMHFPPQATAPTLLGKGAKQWRNGD 360
            PGFEQ++ SSSD NVGLYNSY HESS VAPNLEM M+FP Q+TAPTLLGKGAKQWRNGD
Sbjct: 301 YPGFEQIVSSSSDLNVGLYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKGAKQWRNGD 325

Query: 361 WMCTNCNNHNYASRLQCNR 380
           WMCTNCNNHNYASRLQCNR
Sbjct: 361 WMCTNCNNHNYASRLQCNR 325

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BLAST of CcUC04G074520 vs. ExPASy Swiss-Prot
Match: O13801 (Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC17H9.04c PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 4.0e-04
Identity = 35/143 (24.48%), Postives = 61/143 (42.66%), Query Frame = 0


Query: 104 GAIGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSH-YFARTQGGLDSKINLG 163
           G+ GC  +N+A    C +CG  +  AA+ A    G    +YSH  ++     + +     
Sbjct: 452 GSEGCGYHNFAKNVCCLRCGASRATAAVVADHASGPVNGSYSHNSYSHIPPVMSTSPPNH 511

Query: 164 LIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLVGNNSAISYMSLANQLLSVPKGWRN 223
            +   +   ++ +++N       + G + +  F   G    +S  S+             
Sbjct: 512 SVYPYSQLSINSVTANHGQNFGGQNGGNVS-RFDDHGRFKEVSRPSVTTD---------Q 571

Query: 224 GDWLCNCGFHNYSSRAQCKKCNA 246
           GDWLC CGF N+  R+ C +CNA
Sbjct: 572 GDWLCECGFTNFRRRSNCLRCNA 584

[Close]

BLAST of CcUC04G074520 vs. ExPASy Swiss-Prot
Match: Q27294 (RNA-binding protein cabeza OS=Drosophila melanogaster OX=7227 GN=caz PE=2 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 9.0e-04
Identity = 15/28 (53.57%), Postives = 23/28 (82.14%), Query Frame = 0


Query: 22  KEGDWECSGCKNRNYAFRSFCNRCKQPR 50
           ++GDW+C+ C N N+A+R+ CNRCK P+
Sbjct: 275 RDGDWKCNSCNNTNFAWRNECNRCKTPK 302

[Close]

BLAST of CcUC04G074520 vs. ExPASy TrEMBL
Match: A0A5A7SLZ2 (Putative RNA-binding protein C17H9.04c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001400 PE=4 SV=1)

HSP 1 Score: 661.4 bits (1705), Expect = 2.8e-186
Identity = 326/434 (75.12%), Postives = 340/434 (78.34%), Query Frame = 0


Query: 1   MDGGKEGIEGKVASQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEGIEGK +SQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASSQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTVVCVFCMCIWCGWTAWCAYTWFACGLGLSGSGAIGCTNNNYASREKCK 120
           KWLPRIGDWICT                                  GCTNNNYASREKCK
Sbjct: 61  KWLPRIGDWICT----------------------------------GCTNNNYASREKCK 120

Query: 121 KCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGGLDSKINLGLIGNGTSQHLHPLSSNWS 180
           KCGQPKEVAAMPA+AIPGASFPTYSHYFARTQGGLDSK+NLGLIGNGTSQHLHPLSSNWS
Sbjct: 121 KCGQPKEVAAMPALAIPGASFPTYSHYFARTQGGLDSKMNLGLIGNGTSQHLHPLSSNWS 180

Query: 181 LGGADKYGIHAAPTFPLVGNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQC 240
           +GGADKYGIHAAPTFPL GNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQC
Sbjct: 181 MGGADKYGIHAAPTFPLGGNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQC 240

Query: 241 KKCNASPQALGMKRLASEELVHHWDNKRLNIGPKKLLLKFSETYQWLVPVLFLANEQQQS 300
           KKCNASPQALGMKRLASEELVH WDNKRLNIG                     ANEQQQS
Sbjct: 241 KKCNASPQALGMKRLASEELVHQWDNKRLNIGQ--------------------ANEQQQS 300

Query: 301 CPGFEQMMGSSSDPNVGLYNSYPHESSNVAPNLEMPMHFPPQATAPTLLGKGAKQWRNGD 360
            PG EQMMG+SSDPNVGLYN YPHESS+VAPNLEMP+ FPPQATAPTLLGKGAKQWRNGD
Sbjct: 301 YPGLEQMMGTSSDPNVGLYNPYPHESSSVAPNLEMPIQFPPQATAPTLLGKGAKQWRNGD 360

Query: 361 WMCTNCNNHNYASRLQCNRLSPKLVFSLHIHVEYLITRLRHKFLYGVWQLALHFIARARL 420
           WMCTNCNNHNYASRL CN  +            Y + R     +  ++ L    +  ARL
Sbjct: 361 WMCTNCNNHNYASRLHCNSCATS---------SYYLARK----MADLYVLLAATLVGARL 367

Query: 421 GEIHFLCPSVPSKH 435
            EIHFLCPSVPSK+
Sbjct: 421 KEIHFLCPSVPSKN 367

[Close]

BLAST of CcUC04G074520 vs. ExPASy TrEMBL
Match: A0A0A0KGM9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505830 PE=4 SV=1)

HSP 1 Score: 646.7 bits (1667), Expect = 7.2e-182
Identity = 311/379 (82.06%), Postives = 316/379 (83.38%), Query Frame = 0


Query: 1   MDGGKEGIEGKVASQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEGIEGK + QLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTVVCVFCMCIWCGWTAWCAYTWFACGLGLSGSGAIGCTNNNYASREKCK 120
           KWLPRIGDWICT                                  GCTNNNYASREKCK
Sbjct: 61  KWLPRIGDWICT----------------------------------GCTNNNYASREKCK 120

Query: 121 KCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGGLDSKINLGLIGNGTSQHLHPLSSNWS 180
           KCGQPKEVAAMPA+AIPGASFPTYSHYFARTQGGLDSK+NLGLIGNGTSQHLHPLSSNWS
Sbjct: 121 KCGQPKEVAAMPALAIPGASFPTYSHYFARTQGGLDSKMNLGLIGNGTSQHLHPLSSNWS 180

Query: 181 LGGADKYGIHAAPTFPLVGNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQC 240
           LGGADKYGIHAAPTFPL GNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQC
Sbjct: 181 LGGADKYGIHAAPTFPLSGNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQC 240

Query: 241 KKCNASPQALGMKRLASEELVHHWDNKRLNIGPKKLLLKFSETYQWLVPVLFLANEQQQS 300
           KKCNASPQALGMKRLASEELVH WDNKRLNIG                     ANEQQQS
Sbjct: 241 KKCNASPQALGMKRLASEELVHQWDNKRLNIGQ--------------------ANEQQQS 300

Query: 301 CPGFEQMMGSSSDPNVGLYNSYPHESSNVAPNLEMPMHFPPQATAPTLLGKGAKQWRNGD 360
            PGFEQMMG+ SDPNVGLYNSYPHESS+VAPNLEMPM FPPQATAPTLLGKGAKQWRNGD
Sbjct: 301 YPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAKQWRNGD 325

Query: 361 WMCTNCNNHNYASRLQCNR 380
           WMCTNCNNHNYASRL CNR
Sbjct: 361 WMCTNCNNHNYASRLHCNR 325

[Close]

BLAST of CcUC04G074520 vs. ExPASy TrEMBL
Match: A0A1S3B1J3 (uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC103485118 PE=4 SV=1)

HSP 1 Score: 643.7 bits (1659), Expect = 6.1e-181
Identity = 309/379 (81.53%), Postives = 316/379 (83.38%), Query Frame = 0


Query: 1   MDGGKEGIEGKVASQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEGIEGK +SQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASSQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTVVCVFCMCIWCGWTAWCAYTWFACGLGLSGSGAIGCTNNNYASREKCK 120
           KWLPRIGDWICT                                  GCTNNNYASREKCK
Sbjct: 61  KWLPRIGDWICT----------------------------------GCTNNNYASREKCK 120

Query: 121 KCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGGLDSKINLGLIGNGTSQHLHPLSSNWS 180
           KCGQPKEVAAMPA+AIPGASFPTYSHYFARTQGGLDSK+NLGLIGNGTSQHLHPLSSNWS
Sbjct: 121 KCGQPKEVAAMPALAIPGASFPTYSHYFARTQGGLDSKMNLGLIGNGTSQHLHPLSSNWS 180

Query: 181 LGGADKYGIHAAPTFPLVGNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQC 240
           +GGADKYGIHAAPTFPL GNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQC
Sbjct: 181 MGGADKYGIHAAPTFPLGGNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQC 240

Query: 241 KKCNASPQALGMKRLASEELVHHWDNKRLNIGPKKLLLKFSETYQWLVPVLFLANEQQQS 300
           KKCNASPQALGMKRLASEELVH WDNKRLNIG                     ANEQQQS
Sbjct: 241 KKCNASPQALGMKRLASEELVHQWDNKRLNIGQ--------------------ANEQQQS 300

Query: 301 CPGFEQMMGSSSDPNVGLYNSYPHESSNVAPNLEMPMHFPPQATAPTLLGKGAKQWRNGD 360
            PG EQMMG+SSDPNVGLYN YPHESS+VAPNLEMP+ FPPQATAPTLLGKGAKQWRNGD
Sbjct: 301 YPGLEQMMGTSSDPNVGLYNPYPHESSSVAPNLEMPIQFPPQATAPTLLGKGAKQWRNGD 325

Query: 361 WMCTNCNNHNYASRLQCNR 380
           WMCTNCNNHNYASRL CNR
Sbjct: 361 WMCTNCNNHNYASRLHCNR 325

[Close]

BLAST of CcUC04G074520 vs. ExPASy TrEMBL
Match: A0A6J1BXT0 (uncharacterized RNA-binding protein C17H9.04c OS=Momordica charantia OX=3673 GN=LOC111005702 PE=4 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 5.0e-167
Identity = 289/379 (76.25%), Postives = 302/379 (79.68%), Query Frame = 0


Query: 1   MDGGKEGIEGKVASQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEG+E K + Q+AM EGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGMEAKASLQVAMAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTVVCVFCMCIWCGWTAWCAYTWFACGLGLSGSGAIGCTNNNYASREKCK 120
           KWLPRIGDWICT                                  GCTNNNYASREKCK
Sbjct: 61  KWLPRIGDWICT----------------------------------GCTNNNYASREKCK 120

Query: 121 KCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGGLDSKINLGLIGNGTSQHLHPLSSNWS 180
           KCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGGL++K+NLGLIGNGTSQ  HPLSSNW 
Sbjct: 121 KCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGGLNTKMNLGLIGNGTSQQPHPLSSNWP 180

Query: 181 LGGADKYGIHAAPTFPLVGNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQC 240
           LGG DKYGIHAA TFPL GNNSAISYMS  NQ+L VPKGWRNGDW+CNCGFHNYSSRAQC
Sbjct: 181 LGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQILLVPKGWRNGDWICNCGFHNYSSRAQC 240

Query: 241 KKCNASPQALGMKRLASEELVHHWDNKRLNIGPKKLLLKFSETYQWLVPVLFLANEQQQS 300
           KKCNASPQALGMKRLASEELVH WD+KRLNIG                      NEQQQS
Sbjct: 241 KKCNASPQALGMKRLASEELVHPWDSKRLNIGQ--------------------TNEQQQS 300

Query: 301 CPGFEQMMGSSSDPNVGLYNSYPHESSNVAPNLEMPMHFPPQATAPTLLGKGAKQWRNGD 360
            PGFEQ++ SSSD NVGLYNSY HESS VAPNLEM M+FP Q+TAPTLLGKGAKQWRNGD
Sbjct: 301 YPGFEQIVSSSSDLNVGLYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKGAKQWRNGD 325

Query: 361 WMCTNCNNHNYASRLQCNR 380
           WMCTNCNNHNYASRLQCNR
Sbjct: 361 WMCTNCNNHNYASRLQCNR 325

[Close]

BLAST of CcUC04G074520 vs. ExPASy TrEMBL
Match: A0A6J1EFP4 (uncharacterized RNA-binding protein C17H9.04c OS=Cucurbita moschata OX=3662 GN=LOC111433894 PE=4 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 6.6e-167
Identity = 295/381 (77.43%), Postives = 304/381 (79.79%), Query Frame = 0


Query: 1   MDGGKEGIEGKVASQLA-MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60
           MDG KEGIE K ASQ+A MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD
Sbjct: 1   MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60

Query: 61  SKWLPRIGDWICTVVCVFCMCIWCGWTAWCAYTWFACGLGLSGSGAIGCTNNNYASREKC 120
           SKWLPRIGDWICT                                  GCTNNNYASREKC
Sbjct: 61  SKWLPRIGDWICT----------------------------------GCTNNNYASREKC 120

Query: 121 KKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGGLDSKINLGLIGNGTSQHLHPLSSNW 180
           KKCGQPKE+AAMPAIAI GASFPTYSHYFARTQGGLD+K+NLGL  NG  Q LHPLSSNW
Sbjct: 121 KKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQGGLDTKMNLGL-RNGPLQQLHPLSSNW 180

Query: 181 SLGGADKYGIHAAPTFPLVGNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQ 240
           SLGGADKY IHA+P FPL GNNSAISYMS  NQ+LSVPKGWRNGDW+CNCGFHNYSSRAQ
Sbjct: 181 SLGGADKYEIHASPAFPLGGNNSAISYMSSPNQILSVPKGWRNGDWICNCGFHNYSSRAQ 240

Query: 241 CKKCNASPQALGMKRLASEELVHHWDNKRLNIGPKKLLLKFSETYQWLVPVLFLANEQQQ 300
           CKKCNASPQALGMKRLASEELVH WDNKRLNIG                      NEQQQ
Sbjct: 241 CKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ--------------------TNEQQQ 300

Query: 301 SCPGFEQMMGSSSDPNVG-LYNSYPHESSNVAPNLEMPMHFPPQATAPTLLGKGAKQWRN 360
           S PGFEQM+GSSSDPNVG LYNSYPHESS +APNLEMPM FP QATAPTLLGKGAKQWRN
Sbjct: 301 SFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPNLEMPMQFPQQATAPTLLGKGAKQWRN 326

Query: 361 GDWMCTNCNNHNYASRLQCNR 380
           GDWMCTNCNNHNYASRLQCNR
Sbjct: 361 GDWMCTNCNNHNYASRLQCNR 326

[Close]

BLAST of CcUC04G074520 vs. TAIR 10
Match: AT2G17975.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 310.5 bits (794), Expect = 2.4e-84
Identity = 167/363 (46.01%), Postives = 194/363 (53.44%), Query Frame = 0


Query: 18  MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDSKWLPRIGDWICTVVCVF 77
           MG+G+EGDWEC GC+NRNYAFRSFCNRCKQPRL++DN T P+SKWLPRIGDWICT     
Sbjct: 1   MGDGREGDWECLGCRNRNYAFRSFCNRCKQPRLIMDNNTSPNSKWLPRIGDWICT----- 60

Query: 78  CMCIWCGWTAWCAYTWFACGLGLSGSGAIGCTNNNYASREKCKKCGQPKEVAAMPAIAIP 137
                                        GCTNNNYASREKCKKCGQ KEVAA+ A+AIP
Sbjct: 61  -----------------------------GCTNNNYASREKCKKCGQSKEVAALSALAIP 120

Query: 138 GASFPTYSHYFARTQGGLDSKINLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPL 197
           GAS  T+ HYF R                G   H  P                       
Sbjct: 121 GASLQTHLHYFTR----------------GPESHDQP----------------------- 180

Query: 198 VGNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQCKKCN-ASPQALGMKRLA 257
               S +++ +  NQ  SV K WR+GDW+C CGFHNYSSR QCKKCN  +P ALG KRLA
Sbjct: 181 ---GSLLAFSNATNQ-ASVHKEWRSGDWICRCGFHNYSSRIQCKKCNEIAPLALGTKRLA 240

Query: 258 SEELVHHWDNKRLNIGPKKLLLKFSETYQWLVPVLFLANEQQQSCPGFEQMMGSSSDPNV 317
           SE L H WD+KRLN                                G+  M   S+    
Sbjct: 241 SEALAHEWDSKRLN-------------------------------QGYTSMQTQSA---- 250

Query: 318 GLYNSYPHESSNVAPNLEMPMHFPPQATAPTLLGKGAKQWRNGDWMCTNCNNHNYASRLQ 377
            +Y S+P  S     N ++P+ F  Q + P LLG G KQWR+GDWMCTNC NHNYASR +
Sbjct: 301 -IYASFPGMSLGRVSNWQLPLPFLQQHSTPALLGMGVKQWRDGDWMCTNCKNHNYASRAE 250

Query: 378 CNR 380
           CNR
Sbjct: 361 CNR 250

[Close]

BLAST of CcUC04G074520 vs. TAIR 10
Match: AT2G26695.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 3.1e-07
Identity = 42/163 (25.77%), Postives = 60/163 (36.81%), Query Frame = 0


Query: 87  AWCAYTWFACGLGLSGSGAIGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSH 146
           +W    W  CG          C + N+  RE C+KCG PK           G    TY +
Sbjct: 2   SWTGGDWL-CG---------ACQHANFKKRESCQKCGYPK---------FGGVDVSTYLY 61

Query: 147 YFARTQGGLDSKINLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLVGNNSAISY 206
                  G       G +  G+    H  +S  S        +     +           
Sbjct: 62  NRTEVMAG---DWYCGALNCGS----HNYASRTSCYRCGMIKVEYTEQY------YGAQM 121

Query: 207 MSLANQLLSVPKGWRNGDWLC---NCGFHNYSSRAQCKKCNAS 247
           ++  N   + P GW+ GDW+C    CG HNY+SRA+C KC  +
Sbjct: 122 VAYGNDGAACPPGWKTGDWVCPRVGCGVHNYASRAECFKCKTT 132

[Close]

BLAST of CcUC04G074520 vs. TAIR 10
Match: AT5G25490.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 43.5 bits (101), Expect = 5.4e-04
Identity = 45/170 (26.47%), Postives = 57/170 (33.53%), Query Frame = 0


Query: 22  KEGDWECSGCKNRNYAFRSFCNRCKQPR-------LLVDNKTPPDSKWL-------PRIG 81
           + GDW C  C + N+  R  C RC++PR       LL      P S           R G
Sbjct: 3   RPGDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGFGGRPVSSSFGFNTGPDVRPG 62

Query: 82  DWICTV-------VCVFCMCIWCGWTAWCAYTWFAC---------------------GLG 133
           DW C +             C  CG     A   F+C                     G G
Sbjct: 63  DWYCNLGDCGTHNFANRSSCFKCG----AAKDEFSCSSAAATTGFMDMNVGPRRGLFGFG 122

The following BLAST results are available for this feature:

BLAST of CcUC04G074520 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025683.1	5.9e-186	75.12	putative RNA-binding protein C17H9.04c [Cucumis melo var. makuwa] >TYK12558.1 pu...	[more]
XP_038883349.1	4.2e-184	83.38	uncharacterized RNA-binding protein C17H9.04c [Benincasa hispida]	[more]
XP_004134868.1	1.5e-181	82.06	uncharacterized RNA-binding protein C17H9.04c [Cucumis sativus] >KGN48905.1 hypo...	[more]
XP_008440810.1	1.3e-180	81.53	PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo]	[more]
XP_022132998.1	1.0e-166	76.25	uncharacterized RNA-binding protein C17H9.04c [Momordica charantia]	[more]

BLAST of CcUC04G074520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O13801	4.0e-04	24.48	Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (stra...	[more]
Q27294	9.0e-04	53.57	RNA-binding protein cabeza OS=Drosophila melanogaster OX=7227 GN=caz PE=2 SV=2	[more]

BLAST of CcUC04G074520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SLZ2	2.8e-186	75.12	Putative RNA-binding protein C17H9.04c OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0KGM9	7.2e-182	82.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505830 PE=4 SV=1	[more]
A0A1S3B1J3	6.1e-181	81.53	uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1BXT0	5.0e-167	76.25	uncharacterized RNA-binding protein C17H9.04c OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1EFP4	6.6e-167	77.43	uncharacterized RNA-binding protein C17H9.04c OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of CcUC04G074520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17975.1	2.4e-84	46.01	zinc finger (Ran-binding) family protein	[more]
AT2G26695.1	3.1e-07	25.77	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT5G25490.1	5.4e-04	26.47	Ran BP2/NZF zinc finger-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 107..125 e-value: 0.57 score: 13.8 coord: 223..246 e-value: 1.4E-4 score: 31.2 coord: 24..48 e-value: 1.8E-6 score: 37.5 coord: 359..382 e-value: 0.06 score: 21.6
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 357..379 e-value: 2.4E-4 score: 20.4 coord: 22..49 e-value: 5.5E-7 score: 28.8
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 26..45
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 22..51 score: 9.946939
None	No IPR available	GENE3D	4.10.1060.10		coord: 217..248 e-value: 1.7E-7 score: 32.4 coord: 19..50 e-value: 1.1E-8 score: 36.1 coord: 352..383 e-value: 7.0E-8 score: 33.6
None	No IPR available	PANTHER	PTHR23111:SF71	OS04G0110600 PROTEIN	coord: 20..188 coord: 218..308
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 218..308
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 20..188 coord: 353..378
None	No IPR available	PANTHER	PTHR23111:SF71	OS04G0110600 PROTEIN	coord: 353..378
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 22..50
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 219..246
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 351..380

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC04G074520.1	CcUC04G074520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding