CcUC04G073990 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC04G073990
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr04: 30059322 .. 30060005 (+)
RNA-Seq Expression	CcUC04G073990
Synteny	CcUC04G073990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAACAGAGGGAGTTAAAGCAATGGGACTCTACAATCTTCTTCAAATTATGGTGAAATTTTTTCGATTCACAGAGGTTTTAGTGGCAATGGGTTTTCTCTTCTGGACATTTAGCCGCGTCCCTTTGGTTCTCAGAGTTTCGAGCGATTACATTTCTCAAATCTCCAGCTGTTTTACAAGCCCTGTTTTCGGCTTCATACTCTGCAACACCATCATAATTGCTCTAATTGCCAAACCCCACCACTTCTCCGGCGGAAAAAGCAGCAGTGAAAATGTCGAAACAGGGATTTTGAACGATCTGGTAAGAGACGGCTCCGTTAGGTCTCTGTCTTTGCCTGGGAGTCAGCCAATTGGGAGGCTCTGCTCTGATCAAGAGCAAGAGGAGATCGCCTACGAAGACAAGGAGGTAATTTCTGAGGTGAGATCGATGCGGGCGGCGGTCTTTACCGAAAAGATGGACGATTTCGGTTCGAAATCGGAGAAGTTGAAGATAGCATGGACAGAGTTCCGACGGCTAGAAGCAGAGGAGGAAGCGATTTGGGGAGGTGGGGTTTCGCCGGAAAGTGTACGGCACGGGGAGGAGCTGAGCAATAAGGAATTTCAGCGAAGGATCGACGCGTTCATTGCAAGAGAGTTGAGGTTTCGCTGGGAAGAATCCGGCGCCGTCGTTCTCCGAAGTTAA

mRNA sequence

ATGAAAACAGAGGGAGTTAAAGCAATGGGACTCTACAATCTTCTTCAAATTATGGTGAAATTTTTTCGATTCACAGAGGTTTTAGTGGCAATGGGTTTTCTCTTCTGGACATTTAGCCGCGTCCCTTTGGTTCTCAGAGTTTCGAGCGATTACATTTCTCAAATCTCCAGCTGTTTTACAAGCCCTGTTTTCGGCTTCATACTCTGCAACACCATCATAATTGCTCTAATTGCCAAACCCCACCACTTCTCCGGCGGAAAAAGCAGCAGTGAAAATGTCGAAACAGGGATTTTGAACGATCTGGTAAGAGACGGCTCCGTTAGGTCTCTGTCTTTGCCTGGGAGTCAGCCAATTGGGAGGCTCTGCTCTGATCAAGAGCAAGAGGAGATCGCCTACGAAGACAAGGAGGTAATTTCTGAGGTGAGATCGATGCGGGCGGCGGTCTTTACCGAAAAGATGGACGATTTCGGTTCGAAATCGGAGAAGTTGAAGATAGCATGGACAGAGTTCCGACGGCTAGAAGCAGAGGAGGAAGCGATTTGGGGAGGTGGGGTTTCGCCGGAAAGTGTACGGCACGGGGAGGAGCTGAGCAATAAGGAATTTCAGCGAAGGATCGACGCGTTCATTGCAAGAGAGTTGAGGTTTCGCTGGGAAGAATCCGGCGCCGTCGTTCTCCGAAGTTAA

Coding sequence (CDS)

ATGAAAACAGAGGGAGTTAAAGCAATGGGACTCTACAATCTTCTTCAAATTATGGTGAAATTTTTTCGATTCACAGAGGTTTTAGTGGCAATGGGTTTTCTCTTCTGGACATTTAGCCGCGTCCCTTTGGTTCTCAGAGTTTCGAGCGATTACATTTCTCAAATCTCCAGCTGTTTTACAAGCCCTGTTTTCGGCTTCATACTCTGCAACACCATCATAATTGCTCTAATTGCCAAACCCCACCACTTCTCCGGCGGAAAAAGCAGCAGTGAAAATGTCGAAACAGGGATTTTGAACGATCTGGTAAGAGACGGCTCCGTTAGGTCTCTGTCTTTGCCTGGGAGTCAGCCAATTGGGAGGCTCTGCTCTGATCAAGAGCAAGAGGAGATCGCCTACGAAGACAAGGAGGTAATTTCTGAGGTGAGATCGATGCGGGCGGCGGTCTTTACCGAAAAGATGGACGATTTCGGTTCGAAATCGGAGAAGTTGAAGATAGCATGGACAGAGTTCCGACGGCTAGAAGCAGAGGAGGAAGCGATTTGGGGAGGTGGGGTTTCGCCGGAAAGTGTACGGCACGGGGAGGAGCTGAGCAATAAGGAATTTCAGCGAAGGATCGACGCGTTCATTGCAAGAGAGTTGAGGTTTCGCTGGGAAGAATCCGGCGCCGTCGTTCTCCGAAGTTAA

Protein sequence

MKTEGVKAMGLYNLLQIMVKFFRFTEVLVAMGFLFWTFSRVPLVLRVSSDYISQISSCFTSPVFGFILCNTIIIALIAKPHHFSGGKSSSENVETGILNDLVRDGSVRSLSLPGSQPIGRLCSDQEQEEIAYEDKEVISEVRSMRAAVFTEKMDDFGSKSEKLKIAWTEFRRLEAEEEAIWGGGVSPESVRHGEELSNKEFQRRIDAFIARELRFRWEESGAVVLRS

Homology

[Close]

BLAST of CcUC04G073990 vs. NCBI nr
Match: XP_038882287.1 (uncharacterized protein LOC120073519 [Benincasa hispida])

HSP 1 Score: 377.1 bits (967), Expect = 1.1e-100
Identity = 196/232 (84.48%), Postives = 211/232 (90.95%), Query Frame = 0


Query: 1   MKTEGVKAMGLYNLLQIMVKFFRFTEVLVAMGFLFWTFSRVPLVLRVSSDYISQISSCFT 60
           MKTE VKAMG+YNLLQIMVK FRFTEVLVAMGFLFWTFSR+PLVLRVS DYISQIS+ FT
Sbjct: 1   MKTEKVKAMGVYNLLQIMVKIFRFTEVLVAMGFLFWTFSRLPLVLRVSKDYISQISNYFT 60

Query: 61  SPVFGFILCNTIIIALIAKPHHFSGGKSSSENVETGILNDLVRDGSVRSLSLPGSQPIGR 120
            PVFGFILCNTII+ALIAKP HFSGGK SS+NVET + N+LV+DG+ RSLSLPGS+PIGR
Sbjct: 61  GPVFGFILCNTIIVALIAKP-HFSGGKISSDNVETELFNELVKDGADRSLSLPGSEPIGR 120

Query: 121 LCSDQEQEEIAYEDKEVISEVRSMRAAVFTEKMDDFGSKSEKLKIAWT-----EFRRLEA 180
           LCSD  QEEIAYEDKEVISEVRSM+AA+FTEK DDFGS+SEKLK+AW      EFRRLEA
Sbjct: 121 LCSDSGQEEIAYEDKEVISEVRSMKAAIFTEKRDDFGSESEKLKLAWMEFSGGEFRRLEA 180

Query: 181 EEEAIWGGGVSPESVRHGEELSNKEFQRRIDAFIARELRFRWEESGAVVLRS 228
           EEEAIWGGG SPESV HGEELSNKEFQRRIDAFIARELRFRWEESGAV+LRS
Sbjct: 181 EEEAIWGGGFSPESVWHGEELSNKEFQRRIDAFIARELRFRWEESGAVILRS 231

[Close]

BLAST of CcUC04G073990 vs. NCBI nr
Match: XP_008441123.1 (PREDICTED: uncharacterized protein LOC103485351 [Cucumis melo] >KAA0036210.1 putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [Cucumis melo var. makuwa] >TYK12605.1 putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [Cucumis melo var. makuwa])

HSP 1 Score: 347.4 bits (890), Expect = 9.1e-92
Identity = 183/233 (78.54%), Postives = 204/233 (87.55%), Query Frame = 0


Query: 1   MKTEGVKAMGLYNLLQIMVKFFRFTEVLVAMGFLFWTFSRVPLVLRVSSDYISQISSCFT 60
           MKTEGVKAMG+YNLLQ MVK FRFTEVL AMGFL WTFSR+PLVL+VSSD+ISQIS+ FT
Sbjct: 1   MKTEGVKAMGVYNLLQSMVKIFRFTEVLGAMGFLIWTFSRLPLVLKVSSDFISQISNYFT 60

Query: 61  SPVFGFILCNTIIIALIAKPHHFSGGKSSSEN-VETGILNDLVRDGSVRSLSLPGSQPIG 120
           SPVFGFILCN II++LIAKPH+FSGGK + +N VET + N+LV DG+V SLSL GS+P G
Sbjct: 61  SPVFGFILCNIIIVSLIAKPHNFSGGKINGDNDVETELFNELVEDGAVTSLSLAGSEPNG 120

Query: 121 RLCSDQEQEEIAYEDKEVISEVRSMRAAVFTEKMDDFGSKSEKLKIAWTEF-----RRLE 180
           RLCSD EQE+IAYEDKEVISEV S RAAVFTEKM++FG +SEKLK+ WTEF     RRL+
Sbjct: 121 RLCSDTEQEKIAYEDKEVISEVTSTRAAVFTEKMENFGLESEKLKLVWTEFGGGELRRLK 180

Query: 181 AEEEAIWGGGVSPESVRHGEELSNKEFQRRIDAFIARELRFRWEESGAVVLRS 228
           AEEEAIWGGGVSPE V + EELSN EFQRRIDAFIARELRFRWEESGAVVLRS
Sbjct: 181 AEEEAIWGGGVSPERVGNREELSNMEFQRRIDAFIARELRFRWEESGAVVLRS 233

[Close]

BLAST of CcUC04G073990 vs. NCBI nr
Match: XP_011658494.1 (uncharacterized protein LOC105436032 [Cucumis sativus] >KGN48851.1 hypothetical protein Csa_002710 [Cucumis sativus])

HSP 1 Score: 337.4 bits (864), Expect = 9.4e-89
Identity = 178/233 (76.39%), Postives = 202/233 (86.70%), Query Frame = 0


Query: 1   MKTEGVKAMGLYNLLQIMVKFFRFTEVLVAMGFLFWTFSRVPLVLRVSSDYISQISSCFT 60
           MKT  VKAMG+Y LLQIMVK FRFTEVLVAMGFL WTFSR+PLVLRVSSD+ISQIS+ FT
Sbjct: 1   MKTVEVKAMGVYKLLQIMVKIFRFTEVLVAMGFLIWTFSRLPLVLRVSSDFISQISNYFT 60

Query: 61  SPVFGFILCNTIIIALIAKPHHFSGGK-SSSENVETGILNDLVRDGSVRSLSLPGSQPIG 120
           SPVFGFILCN II++LIAKPH+FS GK +S +NVET + N+LV DG+V SLSL GS+P G
Sbjct: 61  SPVFGFILCNIIIVSLIAKPHNFSCGKINSDKNVETVLFNELVEDGAVTSLSLAGSEPNG 120

Query: 121 RLCSDQEQEEIAYEDKEVISEVRSMRAAVFTEKMDDFGSKSEKLKIAWTEF-----RRLE 180
           RLCSD EQEEIAYEDKEVISEV S + AVF+EKM+DFG +SEKLK+ W E+     RR++
Sbjct: 121 RLCSDTEQEEIAYEDKEVISEVTSTQTAVFSEKMEDFGLESEKLKLLWREYGGGELRRVK 180

Query: 181 AEEEAIWGGGVSPESVRHGEELSNKEFQRRIDAFIARELRFRWEESGAVVLRS 228
           AEEEAIWGGGVS E V +GEELSNKEF+RRIDAFIARELRFRWEESGAVVLR+
Sbjct: 181 AEEEAIWGGGVSREGVGNGEELSNKEFERRIDAFIARELRFRWEESGAVVLRN 233

[Close]

BLAST of CcUC04G073990 vs. NCBI nr
Match: XP_023543998.1 (uncharacterized protein LOC111803706 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.9 bits (847), Expect = 8.8e-87
Identity = 172/232 (74.14%), Postives = 197/232 (84.91%), Query Frame = 0


Query: 1   MKTEGVKAMGLYNLLQIMVKFFRFTEVLVAMGFLFWTFSRVPLVLRVSSDYISQISSCFT 60
           MKTE V+AMGL + L+ ++KF RFTEV  AM FL WTFSR+PL+LRVSSDYISQIS  FT
Sbjct: 1   MKTEEVEAMGLSDHLRTLLKFLRFTEVSAAMAFLVWTFSRLPLILRVSSDYISQISGYFT 60

Query: 61  SPVFGFILCNTIIIALIAKPHHFSGGKSSSENVETGILNDLVRDGSVRSLSLPGSQPIGR 120
           SPVFGF+LCNTIIIALIAKPH FSGGK + +NVET ++N+LV+DG++ SLSLPGS+P GR
Sbjct: 61  SPVFGFMLCNTIIIALIAKPHRFSGGKFTGDNVETELVNELVKDGALTSLSLPGSEPNGR 120

Query: 121 LCSDQEQEEIAYEDKEVISEVRSMRAAVFTEKMDDFGSKSEKLKIAWTE-----FRRLEA 180
           LCSD E EEIAYEDKEVISEVRS  AA FTE+++DF S SEKLK+AW+E     F R E 
Sbjct: 121 LCSDLELEEIAYEDKEVISEVRSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGVFGRAEV 180

Query: 181 EEEAIWGGGVSPESVRHGEELSNKEFQRRIDAFIARELRFRWEESGAVVLRS 228
           E EAIWGGGV PESVR+GEELSNKEF+RRIDAFIAREL+FRWEESGAVVL S
Sbjct: 181 EAEAIWGGGVLPESVRNGEELSNKEFERRIDAFIARELKFRWEESGAVVLPS 232

[Close]

BLAST of CcUC04G073990 vs. NCBI nr
Match: KAG6603959.1 (hypothetical protein SDJN03_04568, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 330.1 bits (845), Expect = 1.5e-86
Identity = 170/230 (73.91%), Postives = 195/230 (84.78%), Query Frame = 0


Query: 1   MKTEGVKAMGLYNLLQIMVKFFRFTEVLVAMGFLFWTFSRVPLVLRVSSDYISQISSCFT 60
           MKTE V+AMGL + L+ ++KFFR TEV  AM FL WTFSR+PL+LRVSSDYISQIS  FT
Sbjct: 1   MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQISGYFT 60

Query: 61  SPVFGFILCNTIIIALIAKPHHFSGGKSSSENVETGILNDLVRDGSVRSLSLPGSQPIGR 120
           SP+FGF+LCNTIIIALI+KPH FSGGK + +NVET ++N+LV+DG++ SLSLPGS+P GR
Sbjct: 61  SPIFGFMLCNTIIIALISKPHRFSGGKFTGDNVETELVNELVKDGALTSLSLPGSEPNGR 120

Query: 121 LCSDQEQEEIAYEDKEVISEVRSMRAAVFTEKMDDFGSKSEKLKIAWT-----EFRRLEA 180
           LCSD E EEIAYEDKEVISEV S  AA FTE+++DF S SEKLK+AW+     EF R E 
Sbjct: 121 LCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFGRAEV 180

Query: 181 EEEAIWGGGVSPESVRHGEELSNKEFQRRIDAFIARELRFRWEESGAVVL 226
           EEEAIWGGGV PESVR GEELSNKEF+RRIDAFIARELRFRWEESGAVVL
Sbjct: 181 EEEAIWGGGVLPESVRQGEELSNKEFERRIDAFIARELRFRWEESGAVVL 230

[Close]

BLAST of CcUC04G073990 vs. ExPASy TrEMBL
Match: A0A5A7SYQ4 (Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001910 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 4.4e-92
Identity = 183/233 (78.54%), Postives = 204/233 (87.55%), Query Frame = 0


Query: 1   MKTEGVKAMGLYNLLQIMVKFFRFTEVLVAMGFLFWTFSRVPLVLRVSSDYISQISSCFT 60
           MKTEGVKAMG+YNLLQ MVK FRFTEVL AMGFL WTFSR+PLVL+VSSD+ISQIS+ FT
Sbjct: 1   MKTEGVKAMGVYNLLQSMVKIFRFTEVLGAMGFLIWTFSRLPLVLKVSSDFISQISNYFT 60

Query: 61  SPVFGFILCNTIIIALIAKPHHFSGGKSSSEN-VETGILNDLVRDGSVRSLSLPGSQPIG 120
           SPVFGFILCN II++LIAKPH+FSGGK + +N VET + N+LV DG+V SLSL GS+P G
Sbjct: 61  SPVFGFILCNIIIVSLIAKPHNFSGGKINGDNDVETELFNELVEDGAVTSLSLAGSEPNG 120

Query: 121 RLCSDQEQEEIAYEDKEVISEVRSMRAAVFTEKMDDFGSKSEKLKIAWTEF-----RRLE 180
           RLCSD EQE+IAYEDKEVISEV S RAAVFTEKM++FG +SEKLK+ WTEF     RRL+
Sbjct: 121 RLCSDTEQEKIAYEDKEVISEVTSTRAAVFTEKMENFGLESEKLKLVWTEFGGGELRRLK 180

Query: 181 AEEEAIWGGGVSPESVRHGEELSNKEFQRRIDAFIARELRFRWEESGAVVLRS 228
           AEEEAIWGGGVSPE V + EELSN EFQRRIDAFIARELRFRWEESGAVVLRS
Sbjct: 181 AEEEAIWGGGVSPERVGNREELSNMEFQRRIDAFIARELRFRWEESGAVVLRS 233

[Close]

BLAST of CcUC04G073990 vs. ExPASy TrEMBL
Match: A0A1S3B3G2 (uncharacterized protein LOC103485351 OS=Cucumis melo OX=3656 GN=LOC103485351 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 4.4e-92
Identity = 183/233 (78.54%), Postives = 204/233 (87.55%), Query Frame = 0


Query: 1   MKTEGVKAMGLYNLLQIMVKFFRFTEVLVAMGFLFWTFSRVPLVLRVSSDYISQISSCFT 60
           MKTEGVKAMG+YNLLQ MVK FRFTEVL AMGFL WTFSR+PLVL+VSSD+ISQIS+ FT
Sbjct: 1   MKTEGVKAMGVYNLLQSMVKIFRFTEVLGAMGFLIWTFSRLPLVLKVSSDFISQISNYFT 60

Query: 61  SPVFGFILCNTIIIALIAKPHHFSGGKSSSEN-VETGILNDLVRDGSVRSLSLPGSQPIG 120
           SPVFGFILCN II++LIAKPH+FSGGK + +N VET + N+LV DG+V SLSL GS+P G
Sbjct: 61  SPVFGFILCNIIIVSLIAKPHNFSGGKINGDNDVETELFNELVEDGAVTSLSLAGSEPNG 120

Query: 121 RLCSDQEQEEIAYEDKEVISEVRSMRAAVFTEKMDDFGSKSEKLKIAWTEF-----RRLE 180
           RLCSD EQE+IAYEDKEVISEV S RAAVFTEKM++FG +SEKLK+ WTEF     RRL+
Sbjct: 121 RLCSDTEQEKIAYEDKEVISEVTSTRAAVFTEKMENFGLESEKLKLVWTEFGGGELRRLK 180

Query: 181 AEEEAIWGGGVSPESVRHGEELSNKEFQRRIDAFIARELRFRWEESGAVVLRS 228
           AEEEAIWGGGVSPE V + EELSN EFQRRIDAFIARELRFRWEESGAVVLRS
Sbjct: 181 AEEEAIWGGGVSPERVGNREELSNMEFQRRIDAFIARELRFRWEESGAVVLRS 233

[Close]

BLAST of CcUC04G073990 vs. ExPASy TrEMBL
Match: A0A0A0KM84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502870 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 4.6e-89
Identity = 178/233 (76.39%), Postives = 202/233 (86.70%), Query Frame = 0


Query: 1   MKTEGVKAMGLYNLLQIMVKFFRFTEVLVAMGFLFWTFSRVPLVLRVSSDYISQISSCFT 60
           MKT  VKAMG+Y LLQIMVK FRFTEVLVAMGFL WTFSR+PLVLRVSSD+ISQIS+ FT
Sbjct: 1   MKTVEVKAMGVYKLLQIMVKIFRFTEVLVAMGFLIWTFSRLPLVLRVSSDFISQISNYFT 60

Query: 61  SPVFGFILCNTIIIALIAKPHHFSGGK-SSSENVETGILNDLVRDGSVRSLSLPGSQPIG 120
           SPVFGFILCN II++LIAKPH+FS GK +S +NVET + N+LV DG+V SLSL GS+P G
Sbjct: 61  SPVFGFILCNIIIVSLIAKPHNFSCGKINSDKNVETVLFNELVEDGAVTSLSLAGSEPNG 120

Query: 121 RLCSDQEQEEIAYEDKEVISEVRSMRAAVFTEKMDDFGSKSEKLKIAWTEF-----RRLE 180
           RLCSD EQEEIAYEDKEVISEV S + AVF+EKM+DFG +SEKLK+ W E+     RR++
Sbjct: 121 RLCSDTEQEEIAYEDKEVISEVTSTQTAVFSEKMEDFGLESEKLKLLWREYGGGELRRVK 180

Query: 181 AEEEAIWGGGVSPESVRHGEELSNKEFQRRIDAFIARELRFRWEESGAVVLRS 228
           AEEEAIWGGGVS E V +GEELSNKEF+RRIDAFIARELRFRWEESGAVVLR+
Sbjct: 181 AEEEAIWGGGVSREGVGNGEELSNKEFERRIDAFIARELRFRWEESGAVVLRN 233

[Close]

BLAST of CcUC04G073990 vs. ExPASy TrEMBL
Match: A0A6J1IPH9 (uncharacterized protein LOC111477644 OS=Cucurbita maxima OX=3661 GN=LOC111477644 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.2e-86
Identity = 171/230 (74.35%), Postives = 194/230 (84.35%), Query Frame = 0


Query: 1   MKTEGVKAMGLYNLLQIMVKFFRFTEVLVAMGFLFWTFSRVPLVLRVSSDYISQISSCFT 60
           MKTE V+AMGL + L+ ++KFFRFTEV  AM  L WTFSR+PL+LRVSSDYISQIS  FT
Sbjct: 1   MKTEEVEAMGLSDHLRTLLKFFRFTEVFAAMALLVWTFSRLPLILRVSSDYISQISGYFT 60

Query: 61  SPVFGFILCNTIIIALIAKPHHFSGGKSSSENVETGILNDLVRDGSVRSLSLPGSQPIGR 120
           SPVFGF+LCNTIIIALIAKPH FSG K + +NVET ++N+LV+DG++ SLSLPGS+P GR
Sbjct: 61  SPVFGFMLCNTIIIALIAKPHRFSGEKFTGDNVETELVNELVKDGALTSLSLPGSEPNGR 120

Query: 121 LCSDQEQEEIAYEDKEVISEVRSMRAAVFTEKMDDFGSKSEKLKIAWT-----EFRRLEA 180
           LCSD E EEIAYEDKEVISEV S  AA FTE+++DF S SEKLK+AW+     EF R E 
Sbjct: 121 LCSDVELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFERAEV 180

Query: 181 EEEAIWGGGVSPESVRHGEELSNKEFQRRIDAFIARELRFRWEESGAVVL 226
           EEEAIWGGGV PESVR GEELSNKEF+RRIDAFIARELRFRWEESGAVVL
Sbjct: 181 EEEAIWGGGVLPESVRQGEELSNKEFERRIDAFIARELRFRWEESGAVVL 230

[Close]

BLAST of CcUC04G073990 vs. ExPASy TrEMBL
Match: A0A6J1GFJ2 (uncharacterized protein LOC111453461 OS=Cucurbita moschata OX=3662 GN=LOC111453461 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 1.2e-84
Identity = 170/230 (73.91%), Postives = 192/230 (83.48%), Query Frame = 0


Query: 1   MKTEGVKAMGLYNLLQIMVKFFRFTEVLVAMGFLFWTFSRVPLVLRVSSDYISQISSCFT 60
           MKTE V+AMGL + L+ ++KF RFTEV  AM FL WTFSR+PL+LRVSSDYISQIS  FT
Sbjct: 1   MKTEEVEAMGLSDHLRTLLKFLRFTEVFAAMAFLVWTFSRLPLILRVSSDYISQISGYFT 60

Query: 61  SPVFGFILCNTIIIALIAKPHHFSGGKSSSENVETGILNDLVRDGSVRSLSLPGSQPIGR 120
           SPVFGF+LCNTIIIALIAKP  FSGGK + +NVET ++N+LV+DG++ SLSLPGS P GR
Sbjct: 61  SPVFGFMLCNTIIIALIAKPPRFSGGKFTGDNVETELVNELVKDGALTSLSLPGSGPNGR 120

Query: 121 LCSDQEQEEIAYEDKEVISEVRSMRAAVFTEKMDDFGSKSEKLKIAWT-----EFRRLEA 180
           LCSD E EEIAYEDKEVISEV S  AA FTE+++DF S SEKLK+AW+     EF R E 
Sbjct: 121 LCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFCSGSEKLKLAWSEFGGGEFGRAEV 180

Query: 181 EEEAIWGGGVSPESVRHGEELSNKEFQRRIDAFIARELRFRWEESGAVVL 226
           E EAIWGGGV PESVR GEELSNKEF+RRIDAFIARELRFRWEESGAVVL
Sbjct: 181 EAEAIWGGGVLPESVRQGEELSNKEFERRIDAFIARELRFRWEESGAVVL 230

[Close]

BLAST of CcUC04G073990 vs. TAIR 10
Match: AT5G66440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 90.1 bits (222), Expect = 2.4e-18
Identity = 74/254 (29.13%), Postives = 123/254 (48.43%), Query Frame = 0


Query: 1   MKTEGVKAMGLYNLLQIMVKFFRFTEVLVAMGFLFWTFSRVPLVLRVSSDYISQISSCFT 60
           +K E  KA+  +N    + +FFR  EV VA+ F+FWTFS++P V+++S  ++ +I++  +
Sbjct: 9   VKAEKAKALRRFNRFCRIGRFFRAAEVCVALLFIFWTFSQLPFVVQISGAFLRRIAAVIS 68

Query: 61  SPVFGFILCNTIIIALIAKPHHFSGGKSSSENVETGILNDLVRDGSVRSLSLPGSQPIGR 120
           +P+F F+L N+I++ L+ K    +   ++  + ET I    VR  SV + S P  + +  
Sbjct: 69  TPLFVFLLGNSIVVVLLTKSSDQT--TTAVASAETEIYQAFVR--SVENRSKPSDEDL-- 128

Query: 121 LCSDQEQEEIAYEDKEV---------------------ISEVRSMRAAVFTEKMDDFGSK 180
                  E I Y+DK+V                     I    S  + V+     D   K
Sbjct: 129 ------TEGIVYDDKQVIVTDLDSNPNLTVDENMPHVEIDSDSSPHSKVYGRSKSDVSGK 188

Query: 181 SEKLKIAWTEFRRLEAEE-----EAIWGGGVSPESVRHGE-ELSNKEFQRRIDAFIAREL 228
                +     R L+  E     +       S E   + E +LSN+EFQ+ I+AFIA++ 
Sbjct: 189 QSSNMVMMMMKRSLQRSETEKFCKETENDDDSEEEKNYPEDDLSNEEFQKTIEAFIAKQR 248

[Close]

BLAST of CcUC04G073990 vs. TAIR 10
Match: AT4G34560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66440.1); Has 67 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 3.4e-04
Identity = 46/227 (20.26%), Postives = 104/227 (45.81%), Query Frame = 0


Query: 1   MKTEGVKAMGLYNLLQIMVKFFRFTEVLVAMGFLFWTFSRVPL-VLRVSSDYISQISSCF 60
           +K E  + +  +  ++     FR  E+L+    L    S++    +++S D   + +   
Sbjct: 9   LKMEKSRGILNFQAIRSFTSLFRLFELLL----LVILISKLSFPSVKISGDIFKEAAVFL 68

Query: 61  TSPVFGFILCNTIIIALIAKPHHFSGGKSSSENVETGILNDLVRDGSVRSLSLPGSQPIG 120
            SP F F + N I+I L+AK   +S     S+       NDL ++   +S      +P+ 
Sbjct: 69  VSPRFVFFIGNAIVITLLAKSGRYSSSHEPSKTATEAASNDLYQEFLHKS---EKKKPVV 128

Query: 121 RLCSDQEQEEIAYEDKEVISEVRSMRAAVFTEKMDDF-GSKSEKLKIAWTEFRRLEAEEE 180
                ++ ++ +   +      +S +A    + ++   G K+ K  ++    R  +++++
Sbjct: 129 YATKTEQLKKPSGGKRVSFGRSQSHKAFEAVKPLESTNGEKNMKRYVSEKHMRVCDSDKK 188

Query: 181 AIWGGGVSPESVRHGEE-LSNKEFQRRIDAFIARELRFRWEESGAVV 225
            +         V+  E+ +SN++F+ +I+AFIAR+ R + +E   ++
Sbjct: 189 VV-------VRVKKPEDGMSNEQFRTKIEAFIARQKRIQKDEEHLII 221

The following BLAST results are available for this feature:

BLAST of CcUC04G073990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882287.1	1.1e-100	84.48	uncharacterized protein LOC120073519 [Benincasa hispida]	[more]
XP_008441123.1	9.1e-92	78.54	PREDICTED: uncharacterized protein LOC103485351 [Cucumis melo] >KAA0036210.1 put...	[more]
XP_011658494.1	9.4e-89	76.39	uncharacterized protein LOC105436032 [Cucumis sativus] >KGN48851.1 hypothetical ...	[more]
XP_023543998.1	8.8e-87	74.14	uncharacterized protein LOC111803706 [Cucurbita pepo subsp. pepo]	[more]
KAG6603959.1	1.5e-86	73.91	hypothetical protein SDJN03_04568, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CcUC04G073990 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC04G073990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SYQ4	4.4e-92	78.54	Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS...	[more]
A0A1S3B3G2	4.4e-92	78.54	uncharacterized protein LOC103485351 OS=Cucumis melo OX=3656 GN=LOC103485351 PE=...	[more]
A0A0A0KM84	4.6e-89	76.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502870 PE=4 SV=1	[more]
A0A6J1IPH9	1.2e-86	74.35	uncharacterized protein LOC111477644 OS=Cucurbita maxima OX=3661 GN=LOC111477644...	[more]
A0A6J1GFJ2	1.2e-84	73.91	uncharacterized protein LOC111453461 OS=Cucurbita moschata OX=3662 GN=LOC1114534...	[more]

BLAST of CcUC04G073990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66440.1	2.4e-18	29.13	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G34560.1	3.4e-04	20.26	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33640	TRANSMEMBRANE PROTEIN	coord: 2..226
None	No IPR available	PANTHER	PTHR33640:SF3	TRNA-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT TRM6MTASE SUBUNIT	coord: 2..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC04G073990.1	CcUC04G073990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane