CcUC04G073490 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC04G073490
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr04: 29741377 .. 29743558 (-)
RNA-Seq ExpressionCcUC04G073490
SyntenyCcUC04G073490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGTGATATAATAATAATAATAACAATAAGAATAATTATTATTATTATTATCATTATATATATATATATATACAACCATCTATTTATTATTTTTTAAGAATTGTCTCATACAACTTTAAACCAAAGATTCAAAGAAAACTAAATGGGTTAACGTTTGGATCTTGTCTGTGTTGAGCTTTTCTATAGACCTCTTGTGGGTTTGACCTCTAACTCGCTTCTTCTTGGTCTCAATTGCTTATTGAGCTGACCTGCATATAAGATCCTCTCACGGTGATGGGTGCCAAGTCTATTGCACTTTAATACTTAAGTTAGTATAAAATGTGTTTAGTTCAATTAAGCACAAAAAGAAGTAATGTTGGTTATATCTTTTGGAGATTACTGACTTCCCTTTTGGGGTCATCAAATGGGGCTATGTATAGATCTTTTCTTTAACACTCGCTTCTGGTTATGTGTAAGTCCAGTGATGTCGAGGTCAAGACTCAAGGTTGTTCTTCCTCTAACACCTACTTATGGTTATGTATAATGTTGGCAATGCCAAGGAGAATGTGGGTCTGGAGGTTGTAGGGCGATAGATGAGCTCGCCTGGTCAGGCTAGATCATTGAGTTCAGCTGGATTATCCATTAAGTTCATCTAGTCAACTCGAATATGTTTTTTGAGATGTTTGCGTTCATCATATGCCCCCTCTGATACCCTATAATCTCGAATCCACTTGTAGACTTCCGACCTTGTTTTCAACAATCTTCAACAACATGAATAAATTAAAATATATGGCATTACACTCTAATAAGGATTTCTTAGAATAGATAGGGTGGTACTATAAAGAGTTCAATGAATTAAAATAGATGCCATTTTTAATAGTACTTGTTTTGATCAATCGGCCCATTTAAGGTTACGGAATTATCACCAATAAAGTTCTAAAAGATATGGCAATTTTTACTAAATTATCACCAACAGATATTGCAAAGAACACAAATTTATCATCAAACCTTTGAAGTACAAAATTATTTCAATCCATCAACATGAGAGTAGTTAAATTAGCACAAAATATATACTTTCGACAAATTAAAATTTTCAGAAGTTCAAATTATTCATTCAACTTATTGTTTCATCCGGCCATTGTTGAACTAAAAAAATTGTTTCATTCAATCAAGATGATAATTGATAACTCGACGTCTATTTGAACATCAAACTTTCTTGATATTCGCTATTATAGTTTCAATATTGGATGTTTTGTAGTTTTAACTAAAATAAATGTAACCAATAATAAATTTTGTTTTATTTCATCACTACTTTATTTATATATAGTAATGTTTATTCTTTAAAAAAAATTGATATTAACAAGTAATAAACGAAATGAAATTACACCAATTACATGAAAATATAATCTTTCCTTTTTTCGTTCTGTTTCGGTCGTTAAAAGTTTTTAAAAAAATGTACTATAATTTTTTTGGTTTTTTCAATTAAAAAAATGCCGGATAGAAATTTGAATCTCAGAAAGTATCTATAATAAAAAATTACATTTTAACTTTCAGAAATTTTACTATCAATTTTAGATAGAAACCGTGAAAGACTTTGTTAAATATAGTGTAGTATTGTGTGCGTGTGTATTAAAAAAAATAATAATAAATAAATAAATAAATAAATAAATAAATAAATTGTTAACAAGCATCTTCAAAGTAACAGTTCAAAGTCATTACTGACCCAAAATTTTGTAGCCCAACTCCCAGTCCCGACCCTTTGGGCCTCCACTAAATGGGCTAGCTACAGGGGAAACTAAGAAGTCCAAATAAGAATAGAGAAAGAATGAAAAGCTGAGCAAGAGCTTTACCAGCTTCAACATTCGCACAACCCACTTGAAAAACAGTTTTGACGGCCACGAAATCCCGACGCCAGTCCGATGGAACCCAGTCCACACCACTGCTCGGAACAGGAAGACAGTCCACACCTCCAGCAGGCATCCTACCAACACCCAGACGCGAAGAGCCCCTCCCCCCGAATCCGAGAGACACCCCACCACCATTAGCATCAACAACAAAGGACAACAACCGCTCAACTTTCAGTTGGATCATAGCAATTGGACCATGGTGCTTCAGACAGTTTTGATCCTCCCTAATCGTCTCACTCGTAACGCCAAATTTCAGAAAATCCTTAAATCCTCACAGATTGGAAGGTTATAG

mRNA sequence

ATGATCAGAAAGAATGAAAAGCTGAGCAAGAGCTTTACCAGCTTCAACATTCGCACAACCCACTTGAAAAACAGTTTTGACGGCCACGAAATCCCGACGCCAGTCCGATGGAACCCAGTCCACACCACTGCTCGGAACAGGAAGACAGTCCACACCTCCAGCAGGCATCCTACCAACACCCAGACGCGAAGAGCCCCTCCCCCCGAATCCGAGAGACACCCCACCACCATTAGCATCAACAACAAAGGACAACAACCGCTCAACTTTCAGTTGGATCATAGCAATTGGACCATGGTGCTTCAGACAGTTTTGATCCTCCCTAATCGTCTCACTCGTAACGCCAAATTTCAGAAAATCCTTAAATCCTCACAGATTGGAAGGTTATAG

Coding sequence (CDS)

ATGATCAGAAAGAATGAAAAGCTGAGCAAGAGCTTTACCAGCTTCAACATTCGCACAACCCACTTGAAAAACAGTTTTGACGGCCACGAAATCCCGACGCCAGTCCGATGGAACCCAGTCCACACCACTGCTCGGAACAGGAAGACAGTCCACACCTCCAGCAGGCATCCTACCAACACCCAGACGCGAAGAGCCCCTCCCCCCGAATCCGAGAGACACCCCACCACCATTAGCATCAACAACAAAGGACAACAACCGCTCAACTTTCAGTTGGATCATAGCAATTGGACCATGGTGCTTCAGACAGTTTTGATCCTCCCTAATCGTCTCACTCGTAACGCCAAATTTCAGAAAATCCTTAAATCCTCACAGATTGGAAGGTTATAG

Protein sequence

MIRKNEKLSKSFTSFNIRTTHLKNSFDGHEIPTPVRWNPVHTTARNRKTVHTSSRHPTNTQTRRAPPPESERHPTTISINNKGQQPLNFQLDHSNWTMVLQTVLILPNRLTRNAKFQKILKSSQIGRL
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC04G073490.1CcUC04G073490.1mRNA