CcUC04G072800 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC04G072800
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Epidermal patterning factor-like protein
Location	CicolChr04: 29280912 .. 29281817 (+)
RNA-Seq Expression	CcUC04G072800
Synteny	CcUC04G072800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGTCCCTTTGCAGCAGCCAGGCTAGTGATGGACAGCCTAAGGCTGTAGAATGGAAGAATAGGGCGTCCTTTGTATGTGATGTGGATACTCCAAATTTGTTTTCCCTCACTGTATTGTTCCTTTCACTGTTCTGCTCCAATCTGCCCTCTTACTCAGAACTTCTCTGCTCTCTCCTCTCTCGTTCTTGTCGGATAACTTATGACTCACCCACCCTTTCCTACACCAATTTATGTTACTCTCTCTCTCATCTCTCTCTCTCTGTTTCCCTTGCACTTGCCTCTATTAAATAGTCATCTTTCTTCCTCTCTCTCTCTCTCTTAGCTACTTGTGGTTGTGGTTCGGTGGGTGGAAGTGGAACAAAGTAACAGAAAAATCTGGCAACTGGGTCTTTATTGCGTATGATTTTTACTCCTTTGCTTCGTTGGATCCATGTGTTCCGGGCATCAATGACTTGATGACTACCATGAATTTGCCTACTGTTTGGGCCACCTCATTACTTATTGTGCTTCTGCATCTTCTTCTTCTTCTCTCCGCCTCTTCTCCTCCCAGAGTATGCCTCTCTTTTGTATCCTCCATGCCTTTCTTAATCTTTTCATGTTTGATATTTCTTTTAGTGATTCTGTTTCTGAGTCTTTTTTGTTTGCTGGTTTGATCAGGGTATATTTTTCGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCATAACAAGTGCAACGAGTGCCACCCATGCATGGCTGTGCAAGTGCCTAGCATGCCCGCCCGCGCGGGCCGGTTGGATTCGCACTCAGCTTTGCCTATGAGATTTTTTGACTCGTCTTCTCAAGGGAACAGATACTCATTTTACAAGCCATTGGGTTGGAAATGCCGCTGTGGAAACCACTTCTTCAATCCTTAG

mRNA sequence

ATGCGGTCCCTTTGCAGCAGCCAGGCTAGTGATGGACAGCCTAAGGCTGTAGAATGGAAGAATAGGGCGTCCTTTCTACTTGTGGTTGTGGTTCGGTGGGTGGAAGTGGAACAAATTCCGGGCATCAATGACTTGATGACTACCATGAATTTGCCTACTGTTTGGGCCACCTCATTACTTATTGTGCTTCTGCATCTTCTTCTTCTTCTCTCCGCCTCTTCTCCTCCCAGAGGTATATTTTTCGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCATAACAAGTGCAACGAGTGCCACCCATGCATGGCTGTGCAAGTGCCTAGCATGCCCGCCCGCGCGGGCCGGTTGGATTCGCACTCAGCTTTGCCTATGAGATTTTTTGACTCGTCTTCTCAAGGGAACAGATACTCATTTTACAAGCCATTGGGTTGGAAATGCCGCTGTGGAAACCACTTCTTCAATCCTTAG

Coding sequence (CDS)

ATGCGGTCCCTTTGCAGCAGCCAGGCTAGTGATGGACAGCCTAAGGCTGTAGAATGGAAGAATAGGGCGTCCTTTCTACTTGTGGTTGTGGTTCGGTGGGTGGAAGTGGAACAAATTCCGGGCATCAATGACTTGATGACTACCATGAATTTGCCTACTGTTTGGGCCACCTCATTACTTATTGTGCTTCTGCATCTTCTTCTTCTTCTCTCCGCCTCTTCTCCTCCCAGAGGTATATTTTTCGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCATAACAAGTGCAACGAGTGCCACCCATGCATGGCTGTGCAAGTGCCTAGCATGCCCGCCCGCGCGGGCCGGTTGGATTCGCACTCAGCTTTGCCTATGAGATTTTTTGACTCGTCTTCTCAAGGGAACAGATACTCATTTTACAAGCCATTGGGTTGGAAATGCCGCTGTGGAAACCACTTCTTCAATCCTTAG

Protein sequence

MRSLCSSQASDGQPKAVEWKNRASFLLVVVVRWVEVEQIPGINDLMTTMNLPTVWATSLLIVLLHLLLLLSASSPPRGIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPARAGRLDSHSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP

Homology

[Close]

BLAST of CcUC04G072800 vs. NCBI nr
Match: XP_008440584.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo])

HSP 1 Score: 243.0 bits (619), Expect = 1.7e-60
Identity = 114/120 (95.00%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 39  IPGINDLMTTMNLPTVWATSLLIVLLHLLLLLSASSPPRGIFFEDKTRLGSTPPSCHNKC 98
           +PG+NDLMTTMNL TVWATSLLIVLLHLLLLLSASSPPRGIFFEDKTRLGSTPPSCHNKC
Sbjct: 15  VPGMNDLMTTMNLATVWATSLLIVLLHLLLLLSASSPPRGIFFEDKTRLGSTPPSCHNKC 74

Query: 99  NECHPCMAVQVPSMPARAGRLDSHSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 158
           NECHPCMAVQVPSMP RA RLDS SALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
Sbjct: 75  NECHPCMAVQVPSMPGRASRLDSSSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 134

[Close]

BLAST of CcUC04G072800 vs. NCBI nr
Match: KGN48738.1 (hypothetical protein Csa_003101 [Cucumis sativus])

HSP 1 Score: 235.3 bits (599), Expect = 3.5e-58
Identity = 111/117 (94.87%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 42  INDLMTTMNLPTVWATSLLIVLLHLLLLLSASSPPRGIFFEDKTRLGSTPPSCHNKCNEC 101
           +NDLMTTMNL TVWATSLLIVLLHLLLLLSASSPPRG+FFEDKTRLGSTPPSCHNKCNEC
Sbjct: 1   MNDLMTTMNLATVWATSLLIVLLHLLLLLSASSPPRGMFFEDKTRLGSTPPSCHNKCNEC 60

Query: 102 HPCMAVQVPSMPARAGRLDSHSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 159
           HPCMAVQVPSMP RA RLDS SALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
Sbjct: 61  HPCMAVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 117

[Close]

BLAST of CcUC04G072800 vs. NCBI nr
Match: KAG6604039.1 (EPIDERMAL PATTERNING FACTOR-like protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034205.1 EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 211.8 bits (538), Expect = 4.2e-51
Identity = 101/113 (89.38%), Postives = 103/113 (91.15%), Query Frame = 0


Query: 46  MTTMNLPTVWATSLLIVLLHLLLLLSASSPPRGIFFEDKTRLGSTPPSCHNKCNECHPCM 105
           MTTMNL TVWATSLL+VL+HLL LLSAS PP GI FEDKTRLGSTPPSCHNKCNECHPCM
Sbjct: 1   MTTMNLATVWATSLLLVLVHLLPLLSASPPPIGISFEDKTRLGSTPPSCHNKCNECHPCM 60

Query: 106 AVQVPSMPARAGRLDSHSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 159
           AVQVPSMP RAGRLDS SALPMRFFDSS QGNRYSFYKPL WKCRCGN FFNP
Sbjct: 61  AVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 113

[Close]

BLAST of CcUC04G072800 vs. NCBI nr
Match: KAA0036313.1 (EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo var. makuwa] >TYK12707.1 EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 177.2 bits (448), Expect = 1.1e-40
Identity = 78/81 (96.30%), Postives = 78/81 (96.30%), Query Frame = 0


Query: 78  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPARAGRLDSHSALPMRFFDSSSQGN 137
           GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMP RA RLDS SALPMRFFDSSSQGN
Sbjct: 29  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRASRLDSSSALPMRFFDSSSQGN 88

Query: 138 RYSFYKPLGWKCRCGNHFFNP 159
           RYSFYKPLGWKCRCGNHFFNP
Sbjct: 89  RYSFYKPLGWKCRCGNHFFNP 109

[Close]

BLAST of CcUC04G072800 vs. NCBI nr
Match: XP_010646934.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Vitis vinifera] >RVX23244.1 Epidermal patterning factor-like protein 1 [Vitis vinifera])

HSP 1 Score: 136.7 bits (343), Expect = 1.7e-28
Identity = 67/123 (54.47%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 46  MTTMNLPTVWATSLLIVLLHLLLLLSA-------SSPPRGIFFEDKTRLGSTPPSCHNKC 105
           M ++    ++  +++  +LHLLL  ++       S   RG+ FE+KTRLGSTPPSCHNKC
Sbjct: 1   MNSLGSYLLYTITVVTAVLHLLLSPASCFSQQQGSDSTRGLLFEEKTRLGSTPPSCHNKC 60

Query: 106 NECHPCMAVQVPSMPARAG-RLDSHSALPMRFFDS--SSQGNRYSFYKPLGWKCRCGNHF 159
           NECHPCMAVQVP++P+ +G RL   + +PM FF+S  S+  NRYS YKPLGWKC CG+HF
Sbjct: 61  NECHPCMAVQVPTLPSHSGPRLGLTATVPMEFFESSPSTAANRYSNYKPLGWKCHCGDHF 120

[Close]

BLAST of CcUC04G072800 vs. ExPASy Swiss-Prot
Match: Q9LFT5 (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.3e-20
Identity = 52/119 (43.70%), Postives = 76/119 (63.87%), Query Frame = 0


Query: 54  VWATSLLIVLLHLLLLLSAS-----------SPPRGIFFEDKTRLGSTPPSCHNKCNECH 113
           ++ ++LL++ L L+LL++               P+    EDK RLGSTPPSCHN+CN CH
Sbjct: 4   IYKSTLLLLPLILILLITPQVSSFLQPIQPPISPQVALIEDKARLGSTPPSCHNRCNNCH 63

Query: 114 PCMAVQVPSMPARA--GRLDSHSALPMRFFDS-SSQGNRYSFYKPLGWKCRCGNHFFNP 159
           PCMA+QVP++P R+   R++  S   +R   S ++  ++YS YKP+GWKC C  HF+NP
Sbjct: 64  PCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCNGHFYNP 122

[Close]

BLAST of CcUC04G072800 vs. ExPASy Swiss-Prot
Match: Q9T068 (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.0e-07
Identity = 40/131 (30.53%), Postives = 60/131 (45.80%), Query Frame = 0


Query: 54  VWA---TSLLIVLL-----HLLLLLSASSPPRGIFFED----------KTRLGSTPPSCH 113
           VW+   +S L++LL     H  L+ +    P  + F            +  +GS PP C 
Sbjct: 2   VWSSNMSSFLLILLILNSTHFSLMANGRPEPDSVEFTKSGDQDVKMMMRGLIGSRPPRCE 61

Query: 114 N-KCNECHPCMAVQVPSMPARAGRLDSHSALPMRFFDSS-------SQGNRYSFYKPLGW 159
             +C  C  C A+QVP+ P    +   HS L      SS       ++G+  + YKP+ W
Sbjct: 62  RVRCRSCGHCEAIQVPTNP----QTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSW 121

[Close]

BLAST of CcUC04G072800 vs. ExPASy Swiss-Prot
Match: C4B8C4 (EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EPFL3 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.6e-05
Identity = 24/68 (35.29%), Postives = 34/68 (50.00%), Query Frame = 0


Query: 84  KTRLGSTPPSCHNKCNECHPCMAVQVPSMPARAGRLDSHSALPMRFFDSSSQGNRYSFYK 143
           + R+GS PPSC  KC  C PC A+Q P++          S++P            Y+ Y+
Sbjct: 54  RRRIGSKPPSCEKKCYGCEPCEAIQFPTI----------SSIP-------HLSPHYANYQ 104

Query: 144 PLGWKCRC 152
           P GW+C C
Sbjct: 114 PEGWRCHC 104

[Close]

BLAST of CcUC04G072800 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.0e-04
Identity = 23/72 (31.94%), Postives = 29/72 (40.28%), Query Frame = 0


Query: 87  LGSTPPSCHNKCNECHPCMAVQVPSMPARAGRLDSHSALPMRFFDSSSQGNRYSFYKPLG 146
           LGS+PP C +KC  C PC  V VP  P      +                     Y P  
Sbjct: 106 LGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAE---------------------YYPEA 156

Query: 147 WKCRCGNHFFNP 159
           W+C+CGN  + P
Sbjct: 166 WRCKCGNKLYMP 156

[Close]

BLAST of CcUC04G072800 vs. ExPASy TrEMBL
Match: A0A1S3B112 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103484960 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 8.1e-61
Identity = 114/120 (95.00%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 39  IPGINDLMTTMNLPTVWATSLLIVLLHLLLLLSASSPPRGIFFEDKTRLGSTPPSCHNKC 98
           +PG+NDLMTTMNL TVWATSLLIVLLHLLLLLSASSPPRGIFFEDKTRLGSTPPSCHNKC
Sbjct: 15  VPGMNDLMTTMNLATVWATSLLIVLLHLLLLLSASSPPRGIFFEDKTRLGSTPPSCHNKC 74

Query: 99  NECHPCMAVQVPSMPARAGRLDSHSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 158
           NECHPCMAVQVPSMP RA RLDS SALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
Sbjct: 75  NECHPCMAVQVPSMPGRASRLDSSSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 134

[Close]

BLAST of CcUC04G072800 vs. ExPASy TrEMBL
Match: A0A0A0KGR1 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G499820 PE=3 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.7e-58
Identity = 111/117 (94.87%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 42  INDLMTTMNLPTVWATSLLIVLLHLLLLLSASSPPRGIFFEDKTRLGSTPPSCHNKCNEC 101
           +NDLMTTMNL TVWATSLLIVLLHLLLLLSASSPPRG+FFEDKTRLGSTPPSCHNKCNEC
Sbjct: 1   MNDLMTTMNLATVWATSLLIVLLHLLLLLSASSPPRGMFFEDKTRLGSTPPSCHNKCNEC 60

Query: 102 HPCMAVQVPSMPARAGRLDSHSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 159
           HPCMAVQVPSMP RA RLDS SALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
Sbjct: 61  HPCMAVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 117

[Close]

BLAST of CcUC04G072800 vs. ExPASy TrEMBL
Match: A0A5A7T0A6 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002950 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 5.5e-41
Identity = 78/81 (96.30%), Postives = 78/81 (96.30%), Query Frame = 0


Query: 78  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPARAGRLDSHSALPMRFFDSSSQGN 137
           GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMP RA RLDS SALPMRFFDSSSQGN
Sbjct: 29  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRASRLDSSSALPMRFFDSSSQGN 88

Query: 138 RYSFYKPLGWKCRCGNHFFNP 159
           RYSFYKPLGWKCRCGNHFFNP
Sbjct: 89  RYSFYKPLGWKCRCGNHFFNP 109

[Close]

BLAST of CcUC04G072800 vs. ExPASy TrEMBL
Match: F6HJL0 (Epidermal patterning factor-like protein OS=Vitis vinifera OX=29760 GN=VIT_00s0391g00030 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 8.2e-29
Identity = 67/123 (54.47%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 46  MTTMNLPTVWATSLLIVLLHLLLLLSA-------SSPPRGIFFEDKTRLGSTPPSCHNKC 105
           M ++    ++  +++  +LHLLL  ++       S   RG+ FE+KTRLGSTPPSCHNKC
Sbjct: 1   MNSLGSYLLYTITVVTAVLHLLLSPASCFSQQQGSDSTRGLLFEEKTRLGSTPPSCHNKC 60

Query: 106 NECHPCMAVQVPSMPARAG-RLDSHSALPMRFFDS--SSQGNRYSFYKPLGWKCRCGNHF 159
           NECHPCMAVQVP++P+ +G RL   + +PM FF+S  S+  NRYS YKPLGWKC CG+HF
Sbjct: 61  NECHPCMAVQVPTLPSHSGPRLGLTATVPMEFFESSPSTAANRYSNYKPLGWKCHCGDHF 120

[Close]

BLAST of CcUC04G072800 vs. ExPASy TrEMBL
Match: A0A438KPW6 (Epidermal patterning factor-like protein OS=Vitis vinifera OX=29760 GN=EPFL1 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 8.2e-29
Identity = 67/123 (54.47%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 46  MTTMNLPTVWATSLLIVLLHLLLLLSA-------SSPPRGIFFEDKTRLGSTPPSCHNKC 105
           M ++    ++  +++  +LHLLL  ++       S   RG+ FE+KTRLGSTPPSCHNKC
Sbjct: 1   MNSLGSYLLYTITVVTAVLHLLLSPASCFSQQQGSDSTRGLLFEEKTRLGSTPPSCHNKC 60

Query: 106 NECHPCMAVQVPSMPARAG-RLDSHSALPMRFFDS--SSQGNRYSFYKPLGWKCRCGNHF 159
           NECHPCMAVQVP++P+ +G RL   + +PM FF+S  S+  NRYS YKPLGWKC CG+HF
Sbjct: 61  NECHPCMAVQVPTLPSHSGPRLGLTATVPMEFFESSPSTAANRYSNYKPLGWKCHCGDHF 120

[Close]

BLAST of CcUC04G072800 vs. TAIR 10
Match: AT5G10310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 100.1 bits (248), Expect = 1.6e-21
Identity = 52/119 (43.70%), Postives = 76/119 (63.87%), Query Frame = 0


Query: 54  VWATSLLIVLLHLLLLLSAS-----------SPPRGIFFEDKTRLGSTPPSCHNKCNECH 113
           ++ ++LL++ L L+LL++               P+    EDK RLGSTPPSCHN+CN CH
Sbjct: 4   IYKSTLLLLPLILILLITPQVSSFLQPIQPPISPQVALIEDKARLGSTPPSCHNRCNNCH 63

Query: 114 PCMAVQVPSMPARA--GRLDSHSALPMRFFDS-SSQGNRYSFYKPLGWKCRCGNHFFNP 159
           PCMA+QVP++P R+   R++  S   +R   S ++  ++YS YKP+GWKC C  HF+NP
Sbjct: 64  PCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCNGHFYNP 122

[Close]

BLAST of CcUC04G072800 vs. TAIR 10
Match: AT4G37810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.8 bits (133), Expect = 3.5e-08
Identity = 40/131 (30.53%), Postives = 60/131 (45.80%), Query Frame = 0


Query: 54  VWA---TSLLIVLL-----HLLLLLSASSPPRGIFFED----------KTRLGSTPPSCH 113
           VW+   +S L++LL     H  L+ +    P  + F            +  +GS PP C 
Sbjct: 2   VWSSNMSSFLLILLILNSTHFSLMANGRPEPDSVEFTKSGDQDVKMMMRGLIGSRPPRCE 61

Query: 114 N-KCNECHPCMAVQVPSMPARAGRLDSHSALPMRFFDSS-------SQGNRYSFYKPLGW 159
             +C  C  C A+QVP+ P    +   HS L      SS       ++G+  + YKP+ W
Sbjct: 62  RVRCRSCGHCEAIQVPTNP----QTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSW 121

[Close]

BLAST of CcUC04G072800 vs. TAIR 10
Match: AT3G13898.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). )

HSP 1 Score: 50.8 bits (120), Expect = 1.1e-06
Identity = 24/68 (35.29%), Postives = 34/68 (50.00%), Query Frame = 0


Query: 84  KTRLGSTPPSCHNKCNECHPCMAVQVPSMPARAGRLDSHSALPMRFFDSSSQGNRYSFYK 143
           + R+GS PPSC  KC  C PC A+Q P++          S++P            Y+ Y+
Sbjct: 54  RRRIGSKPPSCEKKCYGCEPCEAIQFPTI----------SSIP-------HLSPHYANYQ 104

Query: 144 PLGWKCRC 152
           P GW+C C
Sbjct: 114 PEGWRCHC 104

[Close]

BLAST of CcUC04G072800 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 48.1 bits (113), Expect = 7.4e-06
Identity = 23/72 (31.94%), Postives = 29/72 (40.28%), Query Frame = 0


Query: 87  LGSTPPSCHNKCNECHPCMAVQVPSMPARAGRLDSHSALPMRFFDSSSQGNRYSFYKPLG 146
           LGS+PP C +KC  C PC  V VP  P      +                     Y P  
Sbjct: 180 LGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAE---------------------YYPEA 230

Query: 147 WKCRCGNHFFNP 159
           W+C+CGN  + P
Sbjct: 240 WRCKCGNKLYMP 230

[Close]

BLAST of CcUC04G072800 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 48.1 bits (113), Expect = 7.4e-06
Identity = 23/72 (31.94%), Postives = 29/72 (40.28%), Query Frame = 0


Query: 87  LGSTPPSCHNKCNECHPCMAVQVPSMPARAGRLDSHSALPMRFFDSSSQGNRYSFYKPLG 146
           LGS+PP C +KC  C PC  V VP  P      +                     Y P  
Sbjct: 106 LGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAE---------------------YYPEA 156

Query: 147 WKCRCGNHFFNP 159
           W+C+CGN  + P
Sbjct: 166 WRCKCGNKLYMP 156

The following BLAST results are available for this feature:

BLAST of CcUC04G072800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440584.1	1.7e-60	95.00	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo]	[more]
KGN48738.1	3.5e-58	94.87	hypothetical protein Csa_003101 [Cucumis sativus]	[more]
KAG6604039.1	4.2e-51	89.38	EPIDERMAL PATTERNING FACTOR-like protein 1, partial [Cucurbita argyrosperma subs...	[more]
KAA0036313.1	1.1e-40	96.30	EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo var. makuwa] >TYK12707....	[more]
XP_010646934.1	1.7e-28	54.47	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Vitis vinifera] >RVX23244...	[more]

BLAST of CcUC04G072800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFT5	2.3e-20	43.70	EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9T068	5.0e-07	30.53	EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
C4B8C4	1.6e-05	35.29	EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q1PEY6	1.0e-04	31.94	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]

BLAST of CcUC04G072800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B112	8.1e-61	95.00	Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103484960...	[more]
A0A0A0KGR1	1.7e-58	94.87	Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G499...	[more]
A0A5A7T0A6	5.5e-41	96.30	Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
F6HJL0	8.2e-29	54.47	Epidermal patterning factor-like protein OS=Vitis vinifera OX=29760 GN=VIT_00s03...	[more]
A0A438KPW6	8.2e-29	54.47	Epidermal patterning factor-like protein OS=Vitis vinifera OX=29760 GN=EPFL1 PE=...	[more]

BLAST of CcUC04G072800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10310.1	1.6e-21	43.70	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G37810.1	3.5e-08	30.53	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G13898.1	1.1e-06	35.29	unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot...	[more]
AT2G30370.1	7.4e-06	31.94	allergen-related	[more]
AT2G30370.2	7.4e-06	31.94	allergen-related	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 86..158 e-value: 1.3E-21 score: 76.2
None	No IPR available	PANTHER	PTHR33109:SF3	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 1	coord: 54..158
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 54..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC04G072800.1	CcUC04G072800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0010374	stomatal complex development
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane